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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

  Error connecting to IGV?   MAGED2_chrX_54802745_54821015  MAGED2_chrX_54802745_54821015 (clean+top1000)

Multiple Alignments (by translate haplotype frequency)Multiple Alignments (by aa haplotype frequency) Multiple Alignments (by translate haplotype similarity)Multiple Alignments (by aa haplotype similarity)

Item Value
geneid 10916
ensemblid ENSG00000102316.17
hgncid 16353
symbol MAGED2
name MAGE family member D2
refseq_nuc NM_177433.3
refseq_prot NP_803182.1
ensembl_nuc ENST00000375068.6
ensembl_prot ENSP00000364209.1
mane_status MANE Select
chr chrX
start 54807745
end 54816015
strand +
ver v1.2
region chrX:54807745-54816015
region5000 chrX:54802745-54821015
regionname0 MAGED2_chrX_54807745_54816015
regionname5000 MAGED2_chrX_54802745_54821015

ahapid grch38/
chm13v2 		alen total AFR AMR EAS EUR SAS JPT regionname genename aa chr start end
a0001 1/1 606 305 71 59 132 11 30 103 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0002 0/0 606 7 7 0 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0003 0/0 606 3 0 0 3 0 0 3 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0004 0/0 453 1 0 1 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0005 0/0 487 1 0 0 1 0 0 1 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0006 0/0 574 1 0 0 1 0 0 1 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0007 0/0 606 1 0 0 1 0 0 1 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015

chapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
c0001 0/0 1821 148 26 18 83 5 16 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
c0002 1/1 1821 125 23 31 49 6 14 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
c0003 0/0 1821 16 16 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
c0004 0/0 1821 9 0 9 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
c0005 0/0 1821 7 7 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
c0006 0/0 1821 4 3 1 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
c0007 0/0 1821 3 0 0 3 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
c0008 0/0 1821 1 1 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
c0009 0/0 1821 1 1 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
c0010 0/0 1821 1 1 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
c0011 0/0 1820 1 0 0 1 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
c0012 0/0 1822 1 0 0 1 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
c0013 0/0 1820 1 0 1 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
c0014 0/0 1821 1 0 0 1 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015

thapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
t0001 1/1 231 319 78 60 138 11 30 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015

ghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
g0001 0/0 128 13 26 74 5 10 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0002 1/0 94 8 23 44 6 12 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0003 0/0 13 12 1 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0004 0/0 11 1 0 9 0 1 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0005 0/0 8 7 1 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0006 0/0 6 6 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0007 0/0 6 6 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0008 0/0 6 6 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0009 0/0 5 5 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0010 0/0 4 3 1 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0011 0/0 3 1 2 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0012 0/0 3 3 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0013 0/0 2 0 0 2 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0014 0/0 2 0 0 0 0 2 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0015 0/0 1 0 0 1 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0016 0/0 1 0 1 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0017 0/0 1 1 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0018 0/0 1 1 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0019 0/0 1 0 0 1 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0020 0/0 1 1 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0021 0/0 1 0 1 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0022 0/0 1 0 0 0 0 1 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0023 0/0 1 0 1 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0024 0/0 1 0 0 1 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0025 0/0 1 0 1 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0026 0/0 1 0 1 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0027 0/0 1 0 0 0 0 1 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0028 0/1 1 0 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0029 0/0 1 1 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0030 0/0 1 1 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0031 0/0 1 0 0 1 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0032 0/0 1 0 1 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0033 0/0 1 0 0 1 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0034 0/0 1 0 0 1 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0035 0/0 1 0 0 1 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0036 0/0 1 0 0 0 0 1 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0037 0/0 1 0 0 1 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0038 0/0 1 1 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0039 0/0 1 0 0 0 0 1 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0040 0/0 1 0 0 0 0 1 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0041 0/0 1 0 0 1 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
g0042 0/0 1 1 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015

achapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
a0001c0001 0/0 1821 148 26 18 83 5 16 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0001c0002 1/1 1821 125 23 31 49 6 14 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0001c0003 0/0 1821 16 16 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0001c0004 0/0 1821 9 0 9 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0001c0006 0/0 1821 4 3 1 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0001c0008 0/0 1821 1 1 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0001c0009 0/0 1821 1 1 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0001c0010 0/0 1821 1 1 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0002c0005 0/0 1821 7 7 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0003c0007 0/0 1821 3 0 0 3 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0004c0013 0/0 1820 1 0 1 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0005c0012 0/0 1822 1 0 0 1 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0006c0011 0/0 1820 1 0 0 1 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0007c0014 0/0 1821 1 0 0 1 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015

acthapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
a0001c0001t0001 0/0 2051 148 26 18 83 5 16 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0001c0002t0001 1/1 2051 125 23 31 49 6 14 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0001c0003t0001 0/0 2051 16 16 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0001c0004t0001 0/0 2051 9 0 9 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0001c0006t0001 0/0 2051 4 3 1 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0001c0008t0001 0/0 2051 1 1 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0001c0009t0001 0/0 2051 1 1 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0001c0010t0001 0/0 2051 1 1 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0002c0005t0001 0/0 2051 7 7 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0003c0007t0001 0/0 2051 3 0 0 3 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0004c0013t0001 0/0 2050 1 0 1 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0005c0012t0001 0/0 2052 1 0 0 1 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0006c0011t0001 0/0 2050 1 0 0 1 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015
a0007c0014t0001 0/0 2051 1 0 0 1 0 0 MAGED2_chrX_54802745_54821015 MAGED2 copy fasta chrX 54802745 54821015

actghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
a0001c0001t0001g0001 0/0 114 13 16 70 5 10 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0001t0001g0004 0/0 10 0 0 9 0 1 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0001t0001g0005 0/0 8 7 1 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0001t0001g0009 0/0 5 5 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0001t0001g0014 0/0 2 0 0 0 0 2 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0001t0001g0015 0/0 1 0 0 1 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0001t0001g0020 0/0 1 1 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0001t0001g0021 0/0 1 0 1 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0001t0001g0033 0/0 1 0 0 1 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0001t0001g0035 0/0 1 0 0 1 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0001t0001g0036 0/0 1 0 0 0 0 1 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0001t0001g0039 0/0 1 0 0 0 0 1 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0001t0001g0040 0/0 1 0 0 0 0 1 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0001t0001g0041 0/0 1 0 0 1 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0002t0001g0002 1/0 93 8 23 43 6 12 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0002t0001g0003 0/0 13 12 1 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0002t0001g0011 0/0 3 1 2 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0002t0001g0013 0/0 2 0 0 2 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0002t0001g0016 0/0 1 0 1 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0002t0001g0017 0/0 1 1 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0002t0001g0019 0/0 1 0 0 1 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0002t0001g0022 0/0 1 0 0 0 0 1 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0002t0001g0023 0/0 1 0 1 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0002t0001g0024 0/0 1 0 0 1 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0002t0001g0025 0/0 1 0 1 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0002t0001g0026 0/0 1 0 1 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0002t0001g0027 0/0 1 0 0 0 0 1 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0002t0001g0028 0/1 1 0 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0002t0001g0030 0/0 1 1 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0002t0001g0031 0/0 1 0 0 1 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0002t0001g0032 0/0 1 0 1 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0002t0001g0037 0/0 1 0 0 1 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0003t0001g0006 0/0 6 6 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0003t0001g0007 0/0 6 6 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0003t0001g0012 0/0 3 3 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0003t0001g0038 0/0 1 1 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0004t0001g0001 0/0 9 0 9 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0006t0001g0010 0/0 4 3 1 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0008t0001g0029 0/0 1 1 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0009t0001g0004 0/0 1 1 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0001c0010t0001g0018 0/0 1 1 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0002c0005t0001g0008 0/0 6 6 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0002c0005t0001g0042 0/0 1 1 0 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0003c0007t0001g0001 0/0 3 0 0 3 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0004c0013t0001g0001 0/0 1 0 1 0 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0005c0012t0001g0034 0/0 1 0 0 1 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0006c0011t0001g0001 0/0 1 0 0 1 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
a0007c0014t0001g0002 0/0 1 0 0 1 0 0 MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015

sampleid ID
haplotypeid
 ahapid chapid thapid ghapid gpopname popname regionname genename chr start end
HG00099 hp1 a0001 c0001 t0001 g0001 EUR GBR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG00099 hp2 a0001 c0002 t0001 g0002 EUR GBR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG00140 hp1 a0001 c0001 t0001 g0001 EUR GBR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG00280 hp1 a0001 c0002 t0001 g0002 EUR FIN MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG00323 hp1 a0001 c0001 t0001 g0001 EUR FIN MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG00323 hp2 a0001 c0002 t0001 g0002 EUR FIN MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG00438 hp1 a0001 c0001 t0001 g0001 EAS CHS MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG00438 hp2 a0001 c0001 t0001 g0001 EAS CHS MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG00544 hp1 a0001 c0002 t0001 g0002 EAS CHS MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG00544 hp2 a0001 c0002 t0001 g0002 EAS CHS MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG00558 hp1 a0001 c0001 t0001 g0001 EAS CHS MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG00558 hp2 a0001 c0001 t0001 g0001 EAS CHS MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG00597 hp1 a0001 c0001 t0001 g0001 EAS CHS MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG00597 hp2 a0001 c0002 t0001 g0002 EAS CHS MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG00609 hp1 a0001 c0001 t0001 g0001 EAS CHS MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG00621 hp1 a0001 c0001 t0001 g0001 EAS CHS MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG00639 hp1 a0001 c0001 t0001 g0001 AMR PUR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG00639 hp2 a0001 c0002 t0001 g0002 AMR PUR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG00642 hp1 a0001 c0002 t0001 g0002 AMR PUR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG00673 hp1 a0001 c0001 t0001 g0001 EAS CHS MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG00733 hp1 a0001 c0002 t0001 g0002 AMR PUR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG00733 hp2 a0001 c0002 t0001 g0032 AMR PUR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG00735 hp1 a0001 c0002 t0001 g0003 AMR PUR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG00735 hp2 a0001 c0004 t0001 g0001 AMR PUR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG00738 hp1 a0001 c0001 t0001 g0021 AMR PUR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG00741 hp1 a0001 c0004 t0001 g0001 AMR PUR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG00741 hp2 a0001 c0004 t0001 g0001 AMR PUR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01069 hp1 a0001 c0002 t0001 g0002 AMR PUR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01070 hp1 a0001 c0001 t0001 g0001 AMR PUR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01070 hp2 a0001 c0002 t0001 g0002 AMR PUR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01074 hp1 a0001 c0001 t0001 g0001 AMR PUR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01081 hp1 a0001 c0004 t0001 g0001 AMR PUR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01081 hp2 a0001 c0001 t0001 g0001 AMR PUR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01099 hp1 a0001 c0002 t0001 g0002 AMR PUR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01106 hp1 a0001 c0002 t0001 g0002 AMR PUR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01109 hp1 a0001 c0001 t0001 g0001 AMR PUR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01167 hp1 a0001 c0002 t0001 g0011 AMR PUR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01168 hp1 a0004 c0013 t0001 g0001 AMR PUR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01168 hp2 a0001 c0002 t0001 g0016 AMR PUR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01169 hp1 a0001 c0001 t0001 g0001 AMR PUR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01169 hp2 a0001 c0002 t0001 g0011 AMR PUR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01175 hp1 a0001 c0002 t0001 g0002 AMR PUR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01175 hp2 a0001 c0002 t0001 g0002 AMR PUR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01192 hp1 a0001 c0002 t0001 g0026 AMR PUR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01243 hp1 a0001 c0001 t0001 g0005 AMR PUR MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01255 hp1 a0001 c0006 t0001 g0010 AMR CLM MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01256 hp1 a0001 c0004 t0001 g0001 AMR CLM MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01257 hp1 a0001 c0001 t0001 g0001 AMR CLM MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01257 hp2 a0001 c0002 t0001 g0025 AMR CLM MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01258 hp1 a0001 c0001 t0001 g0001 AMR CLM MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01261 hp1 a0001 c0001 t0001 g0001 AMR CLM MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01346 hp1 a0001 c0004 t0001 g0001 AMR CLM MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01346 hp2 a0001 c0002 t0001 g0002 AMR CLM MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01358 hp1 a0001 c0004 t0001 g0001 AMR CLM MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01361 hp1 a0001 c0004 t0001 g0001 AMR CLM MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01361 hp2 a0001 c0002 t0001 g0023 AMR CLM MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01433 hp1 a0001 c0002 t0001 g0002 AMR CLM MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01515 hp1 a0001 c0002 t0001 g0002 EUR IBS MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01516 hp1 a0001 c0002 t0001 g0002 EUR IBS MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01516 hp2 a0001 c0001 t0001 g0001 EUR IBS MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01884 hp1 a0001 c0002 t0001 g0003 AFR ACB MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01884 hp2 a0001 c0002 t0001 g0003 AFR ACB MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01891 hp1 a0001 c0002 t0001 g0003 AFR ACB MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01891 hp2 a0002 c0005 t0001 g0008 AFR ACB MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01928 hp1 a0001 c0002 t0001 g0002 AMR PEL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01934 hp1 a0001 c0001 t0001 g0001 AMR PEL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01943 hp1 a0001 c0002 t0001 g0002 AMR PEL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01952 hp1 a0001 c0002 t0001 g0002 AMR PEL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01975 hp1 a0001 c0002 t0001 g0002 AMR PEL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01975 hp2 a0001 c0001 t0001 g0001 AMR PEL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01981 hp1 a0001 c0001 t0001 g0001 AMR PEL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01981 hp2 a0001 c0002 t0001 g0002 AMR PEL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01993 hp1 a0001 c0001 t0001 g0001 AMR PEL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01993 hp2 a0001 c0002 t0001 g0002 AMR PEL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02004 hp1 a0001 c0002 t0001 g0002 AMR PEL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02004 hp2 a0001 c0002 t0001 g0002 AMR PEL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02015 hp1 a0001 c0001 t0001 g0001 EAS KHV MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02027 hp1 a0001 c0002 t0001 g0037 EAS KHV MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02040 hp1 a0001 c0001 t0001 g0001 EAS KHV MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02055 hp1 a0001 c0001 t0001 g0001 AFR ACB MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02056 hp1 a0001 c0002 t0001 g0002 EAS KHV MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02071 hp1 a0001 c0002 t0001 g0002 EAS KHV MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02074 hp1 a0001 c0001 t0001 g0001 EAS KHV MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02080 hp1 a0001 c0001 t0001 g0001 EAS KHV MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02080 hp2 a0001 c0002 t0001 g0002 EAS KHV MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02083 hp1 a0001 c0002 t0001 g0002 EAS KHV MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02129 hp1 a0001 c0001 t0001 g0001 EAS KHV MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02132 hp1 a0001 c0002 t0001 g0002 EAS KHV MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02135 hp1 a0001 c0002 t0001 g0002 EAS KHV MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02145 hp1 a0001 c0002 t0001 g0002 AFR ACB MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02148 hp1 a0001 c0001 t0001 g0001 AMR PEL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02148 hp2 a0001 c0002 t0001 g0002 AMR PEL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02155 hp1 a0001 c0001 t0001 g0001 EAS CDX MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02155 hp2 a0001 c0001 t0001 g0001 EAS CDX MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02165 hp1 a0001 c0002 t0001 g0002 EAS CDX MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02165 hp2 a0001 c0001 t0001 g0001 EAS CDX MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02257 hp1 a0001 c0003 t0001 g0006 AFR ACB MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02257 hp2 a0001 c0002 t0001 g0003 AFR ACB MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02258 hp1 a0001 c0001 t0001 g0005 AFR ACB MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02273 hp1 a0001 c0002 t0001 g0002 AMR PEL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02273 hp2 a0001 c0002 t0001 g0002 AMR PEL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02280 hp1 a0001 c0002 t0001 g0030 AFR ACB MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02280 hp2 a0001 c0001 t0001 g0005 AFR ACB MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02293 hp1 a0001 c0002 t0001 g0002 AMR PEL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02293 hp2 a0001 c0001 t0001 g0001 AMR PEL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02572 hp1 a0002 c0005 t0001 g0008 AFR GWD MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02602 hp1 a0001 c0002 t0001 g0002 SAS PJL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02615 hp1 a0001 c0003 t0001 g0012 AFR GWD MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02615 hp2 a0001 c0002 t0001 g0002 AFR GWD MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02622 hp1 a0001 c0001 t0001 g0001 AFR GWD MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02622 hp2 a0001 c0003 t0001 g0038 AFR GWD MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02630 hp1 a0002 c0005 t0001 g0008 AFR GWD MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02630 hp2 a0001 c0002 t0001 g0017 AFR GWD MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02647 hp1 a0001 c0003 t0001 g0012 AFR GWD MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02683 hp1 a0001 c0002 t0001 g0002 SAS PJL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02683 hp2 a0001 c0001 t0001 g0040 SAS PJL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02698 hp1 a0001 c0001 t0001 g0039 SAS PJL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02717 hp1 a0001 c0001 t0001 g0005 AFR GWD MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02723 hp1 a0001 c0003 t0001 g0006 AFR GWD MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02723 hp2 a0001 c0001 t0001 g0001 AFR GWD MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02735 hp1 a0001 c0002 t0001 g0002 SAS PJL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02738 hp1 a0001 c0001 t0001 g0001 SAS PJL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02809 hp1 a0001 c0001 t0001 g0001 AFR GWD MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02809 hp2 a0002 c0005 t0001 g0042 AFR GWD MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02818 hp1 a0001 c0001 t0001 g0009 AFR GWD MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02818 hp2 a0001 c0001 t0001 g0005 AFR GWD MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02886 hp1 a0001 c0001 t0001 g0009 AFR GWD MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02886 hp2 a0001 c0002 t0001 g0003 AFR GWD MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02895 hp1 a0001 c0003 t0001 g0006 AFR GWD MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02896 hp1 a0001 c0001 t0001 g0001 AFR GWD MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02896 hp2 a0001 c0002 t0001 g0003 AFR GWD MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02897 hp1 a0001 c0001 t0001 g0001 AFR GWD MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02897 hp2 a0001 c0003 t0001 g0006 AFR GWD MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02922 hp1 a0001 c0006 t0001 g0010 AFR ESN MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02922 hp2 a0001 c0001 t0001 g0005 AFR ESN MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02965 hp1 a0001 c0002 t0001 g0002 AFR ESN MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02970 hp1 a0001 c0006 t0001 g0010 AFR ESN MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02970 hp2 a0001 c0008 t0001 g0029 AFR ESN MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02976 hp1 a0001 c0001 t0001 g0001 AFR ESN MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02976 hp2 a0002 c0005 t0001 g0008 AFR ESN MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03017 hp1 a0001 c0002 t0001 g0002 SAS PJL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03041 hp1 a0001 c0002 t0001 g0003 AFR GWD MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03041 hp2 a0001 c0002 t0001 g0002 AFR GWD MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03098 hp1 a0001 c0001 t0001 g0009 AFR MSL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03130 hp1 a0001 c0002 t0001 g0003 AFR ESN MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03139 hp1 a0001 c0002 t0001 g0002 AFR ESN MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03195 hp1 a0001 c0002 t0001 g0002 AFR ESN MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03195 hp2 a0001 c0003 t0001 g0007 AFR ESN MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03209 hp1 a0001 c0001 t0001 g0009 AFR MSL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03225 hp1 a0001 c0001 t0001 g0001 AFR MSL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03453 hp1 a0002 c0005 t0001 g0008 AFR MSL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03453 hp2 a0001 c0003 t0001 g0012 AFR MSL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03486 hp1 a0001 c0003 t0001 g0007 AFR MSL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03486 hp2 a0001 c0009 t0001 g0004 AFR MSL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03490 hp1 a0001 c0002 t0001 g0002 SAS PJL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03491 hp1 a0001 c0002 t0001 g0002 SAS PJL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03491 hp2 a0001 c0001 t0001 g0001 SAS PJL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03492 hp1 a0001 c0001 t0001 g0001 SAS PJL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03516 hp1 a0001 c0006 t0001 g0010 AFR ESN MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03516 hp2 a0001 c0003 t0001 g0007 AFR ESN MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03540 hp1 a0001 c0001 t0001 g0001 AFR GWD MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03540 hp2 a0001 c0001 t0001 g0001 AFR GWD MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03579 hp1 a0001 c0001 t0001 g0009 AFR MSL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03654 hp1 a0001 c0002 t0001 g0002 SAS PJL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03669 hp1 a0001 c0001 t0001 g0004 SAS PJL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03669 hp2 a0001 c0001 t0001 g0001 SAS PJL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03688 hp1 a0001 c0002 t0001 g0002 SAS STU MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03704 hp1 a0001 c0001 t0001 g0014 SAS PJL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03704 hp2 a0001 c0001 t0001 g0014 SAS PJL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03710 hp1 a0001 c0001 t0001 g0001 SAS PJL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03831 hp1 a0001 c0002 t0001 g0022 SAS BEB MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03831 hp2 a0001 c0002 t0001 g0002 SAS BEB MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03834 hp1 a0001 c0001 t0001 g0001 SAS BEB MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03834 hp2 a0001 c0002 t0001 g0027 SAS BEB MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03942 hp1 a0001 c0001 t0001 g0001 SAS BEB MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG04115 hp1 a0001 c0002 t0001 g0002 SAS STU MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG04184 hp1 a0001 c0002 t0001 g0002 SAS BEB MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG04184 hp2 a0001 c0001 t0001 g0001 SAS BEB MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG04199 hp1 a0001 c0002 t0001 g0002 SAS STU MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG04204 hp1 a0001 c0001 t0001 g0001 SAS STU MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG04228 hp1 a0001 c0001 t0001 g0036 SAS STU MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18522 hp1 a0001 c0001 t0001 g0001 AFR YRI MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18612 hp1 a0001 c0001 t0001 g0001 EAS CHB MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18747 hp1 a0001 c0001 t0001 g0001 EAS CHB MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18906 hp1 a0002 c0005 t0001 g0008 AFR YRI MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18906 hp2 a0001 c0003 t0001 g0006 AFR YRI MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18939 hp1 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18939 hp2 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18940 hp1 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18943 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18944 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18945 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18948 hp1 a0001 c0001 t0001 g0035 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18949 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18949 hp2 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18950 hp1 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18950 hp2 a0001 c0001 t0001 g0004 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18952 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18953 hp1 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18957 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18957 hp2 a0001 c0001 t0001 g0004 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18959 hp1 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18960 hp1 a0001 c0001 t0001 g0004 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18961 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18962 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18963 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18963 hp2 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18965 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18966 hp1 a0003 c0007 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18967 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18968 hp1 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18968 hp2 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18969 hp1 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18969 hp2 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18970 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18971 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18972 hp1 a0001 c0002 t0001 g0013 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18972 hp2 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18973 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18973 hp2 a0001 c0002 t0001 g0013 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18974 hp1 a0005 c0012 t0001 g0034 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18975 hp1 a0001 c0001 t0001 g0041 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18975 hp2 a0001 c0002 t0001 g0019 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18977 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18978 hp1 a0003 c0007 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18978 hp2 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18979 hp1 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18979 hp2 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18980 hp1 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18980 hp2 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18982 hp1 a0001 c0002 t0001 g0031 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18983 hp1 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18984 hp1 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18986 hp1 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18988 hp1 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18989 hp1 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18990 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18992 hp1 a0006 c0011 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18992 hp2 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18994 hp1 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18995 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18998 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18998 hp2 a0001 c0001 t0001 g0004 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18999 hp1 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18999 hp2 a0001 c0001 t0001 g0033 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19000 hp1 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19001 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19001 hp2 a0001 c0001 t0001 g0015 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19002 hp1 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19002 hp2 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19003 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19003 hp2 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19004 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19005 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19007 hp1 a0001 c0001 t0001 g0004 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19009 hp1 a0001 c0001 t0001 g0004 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19010 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19010 hp2 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19011 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19011 hp2 a0001 c0001 t0001 g0004 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19012 hp1 a0007 c0014 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19030 hp1 a0001 c0001 t0001 g0001 AFR LWK MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19030 hp2 a0001 c0010 t0001 g0018 AFR LWK MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19043 hp1 a0001 c0002 t0001 g0003 AFR LWK MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19054 hp1 a0001 c0001 t0001 g0004 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19054 hp2 a0001 c0002 t0001 g0024 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19056 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19057 hp1 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19057 hp2 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19058 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19060 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19062 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19063 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19064 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19064 hp2 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19066 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19067 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19068 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19070 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19072 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19074 hp1 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19074 hp2 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19075 hp1 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19076 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19079 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19080 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19080 hp2 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19082 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19084 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19084 hp2 a0003 c0007 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19085 hp1 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19087 hp1 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19087 hp2 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19088 hp1 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19090 hp1 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19090 hp2 a0001 c0001 t0001 g0004 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19091 hp1 a0001 c0001 t0001 g0001 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19240 hp1 a0001 c0001 t0001 g0001 AFR YRI MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA19240 hp2 a0001 c0002 t0001 g0011 AFR YRI MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA20129 hp1 a0001 c0003 t0001 g0007 AFR ASW MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA20129 hp2 a0001 c0001 t0001 g0020 AFR ASW MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA20752 hp1 a0001 c0002 t0001 g0002 EUR TSI MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA20805 hp1 a0001 c0001 t0001 g0001 EUR TSI MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA20905 hp1 a0001 c0001 t0001 g0001 SAS GIH MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01123 hp1 a0001 c0004 t0001 g0001 AMR CLM MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG01123 hp2 a0001 c0001 t0001 g0001 AMR CLM MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02109 hp1 a0001 c0002 t0001 g0003 AFR ACB MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02109 hp2 a0001 c0003 t0001 g0006 AFR ACB MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02486 hp1 a0001 c0001 t0001 g0005 AFR ACB MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02559 hp1 a0001 c0001 t0001 g0005 AFR ACB MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG02559 hp2 a0001 c0003 t0001 g0007 AFR ACB MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG03471 hp1 a0001 c0003 t0001 g0007 AFR MSL MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG06807 hp1 a0001 c0002 t0001 g0003 AFR USA MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
HG06807 hp2 a0001 c0002 t0001 g0002 AFR USA MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA18955 hp1 a0001 c0002 t0001 g0002 EAS JPT MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA20300 hp1 a0001 c0002 t0001 g0003 AFR USA MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
NA20300 hp2 a0001 c0002 t0001 g0002 AFR USA MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
homoSapiens_chm13v2 hp1 a0001 c0002 t0001 g0028 REF REF MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015
homoSapiens_grch38 hp1 a0001 c0002 t0001 g0002 REF REF MAGED2_chrX_54802745_54821015 MAGED2 chrX 54802745 54821015

chr:pos ref alt #
# of ahapid:amino-acid(protein) level
 ahapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chrX:54809755 A
A
 G
G
 1 a0007
a0007
 1 NA19012.hp1
NA19012.hp1
 missense_variant MODERATE c.79A>G
c.79A>G
 p.Met27Val
p.Met27Val
 MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 3/13 166/2051 79/1821 27/606 chrX 54809755
chrX:54810017 A
A
 G
G
 1 a0003
a0003
 3 NA18966.hp1
NA18978.hp1
NA19084.hp2
NA18966.hp1
NA18978.hp1
NA19084.hp2
 missense_variant MODERATE c.341A>G
c.341A>G
 p.Gln114Arg
p.Gln114Arg
 MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 3/13 428/2051 341/1821 114/606 chrX 54810017
chrX:54810844 G
G
 C
C
 1 a0002
a0002
 7 HG01891.hp2
HG02572.hp1
HG02630.hp1
others(4): Show 
HG01891.hp2
HG02572.hp1
HG02630.hp1
HG02809.hp2
HG02976.hp2
HG03453.hp1
NA18906.hp1
 missense_variant MODERATE c.561G>C
c.561G>C
 p.Glu187Asp
p.Glu187Asp
 MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 4/13 648/2051 561/1821 187/606 chrX 54810844
chrX:54814694 TC
TC
 T
T
 1 a0004
a0004
 1 HG01168.hp1
HG01168.hp1
 frameshift_variant HIGH c.1310delC
c.1310delC
 p.Pro437fs
p.Pro437fs
 MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 11/13 1397/2051 1310/1821 437/606 INFO_REALIGN_3_PRIME chrX 54814694
chrX:54815296 A
A
 AT
AT
 1 a0005
a0005
 1 NA18974.hp1
NA18974.hp1
 frameshift_variant HIGH c.1436dupT
c.1436dupT
 p.Met479fs
p.Met479fs
 MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 12/13 1524/2051 1437/1821 479/606 INFO_REALIGN_3_PRIME chrX 54815296
chrX:54815403 GC
GC
 G
G
 1 a0006
a0006
 1 NA18992.hp1
NA18992.hp1
 frameshift_variant HIGH c.1545delC
c.1545delC
 p.Cys516fs
p.Cys516fs
 MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 12/13 1632/2051 1545/1821 515/606 INFO_REALIGN_3_PRIME chrX 54815403
chrX:54815432 G
G
 GA
GA
 1 a0005
a0005
 1 NA18974.hp1
NA18974.hp1
 frameshift_variant HIGH c.1572dupA
c.1572dupA
 p.Pro525fs
p.Pro525fs
 MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 12/13 1660/2051 1573/1821 525/606 INFO_REALIGN_3_PRIME chrX 54815432
chrX:54815440 GC
GC
 G
G
 1 a0005
a0005
 1 NA18974.hp1
NA18974.hp1
 frameshift_variant HIGH c.1581delC
c.1581delC
 p.Ala529fs
p.Ala529fs
 MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 12/13 1668/2051 1581/1821 527/606 INFO_REALIGN_3_PRIME chrX 54815440
chrX:54815531 A
A
 T
T
 1 a0005
a0005
 1 NA18974.hp1
NA18974.hp1
 missense_variant MODERATE c.1670A>T
c.1670A>T
 p.Asn557Ile
p.Asn557Ile
 MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 12/13 1757/2051 1670/1821 557/606 chrX 54815531
chrX:54815590 GC
GC
 G
G
 1 a0005
a0005
 1 NA18974.hp1
NA18974.hp1
 frameshift_variant HIGH c.1731delC
c.1731delC
 p.Thr578fs
p.Thr578fs
 MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 12/13 1818/2051 1731/1821 577/606 INFO_REALIGN_3_PRIME chrX 54815590
chrX:54815646 T
T
 TG
TG
 1 a0005
a0005
 1 NA18974.hp1
NA18974.hp1
 frameshift_variant HIGH c.1787dupG
c.1787dupG
 p.Ser597fs
p.Ser597fs
 MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 12/13 1875/2051 1788/1821 596/606 INFO_REALIGN_3_PRIME chrX 54815646

chr:pos ref alt #
# of chapid
 chapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chrX:54809928 A
A
 G
G
 6 a0001c0001
a0001c0004
a0003c0007
others(3): Show 
a0001c0001
a0001c0004
a0003c0007
a0004c0013
a0005c0012
a0006c0011
 163 HG00099.hp1
HG00140.hp1
HG00323.hp1
others(160): Show 
HG00099.hp1
HG00140.hp1
HG00323.hp1
HG00438.hp1
HG00438.hp2
HG00558.hp1
HG00558.hp2
HG00597.hp1
HG00609.hp1
HG00621.hp1
HG00639.hp1
HG00673.hp1
HG00735.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01070.hp1
HG01074.hp1
HG01081.hp1
HG01081.hp2
HG01109.hp1
HG01123.hp1
HG01123.hp2
HG01168.hp1
HG01169.hp1
HG01243.hp1
HG01256.hp1
HG01257.hp1
HG01258.hp1
HG01261.hp1
HG01346.hp1
HG01358.hp1
HG01361.hp1
HG01516.hp2
HG01934.hp1
HG01975.hp2
HG01981.hp1
HG01993.hp1
HG02015.hp1
HG02040.hp1
HG02055.hp1
HG02074.hp1
HG02080.hp1
HG02129.hp1
HG02148.hp1
HG02155.hp1
HG02155.hp2
HG02165.hp2
HG02258.hp1
HG02280.hp2
HG02293.hp2
HG02486.hp1
HG02559.hp1
HG02622.hp1
HG02683.hp2
HG02698.hp1
HG02717.hp1
HG02723.hp2
HG02738.hp1
HG02809.hp1
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02896.hp1
HG02897.hp1
HG02922.hp2
HG02976.hp1
HG03098.hp1
HG03209.hp1
HG03225.hp1
HG03491.hp2
HG03492.hp1
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03669.hp2
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03834.hp1
HG03942.hp1
HG04184.hp2
HG04204.hp1
HG04228.hp1
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18939.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18949.hp1
NA18950.hp2
NA18952.hp1
NA18957.hp1
NA18957.hp2
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18963.hp1
NA18965.hp1
NA18966.hp1
NA18967.hp1
NA18968.hp2
NA18969.hp2
NA18970.hp1
NA18971.hp1
NA18972.hp2
NA18973.hp1
NA18974.hp1
NA18975.hp1
NA18977.hp1
NA18978.hp1
NA18979.hp2
NA18980.hp2
NA18990.hp1
NA18992.hp1
NA18995.hp1
NA18998.hp1
NA18998.hp2
NA18999.hp2
NA19001.hp1
NA19001.hp2
NA19002.hp2
NA19003.hp1
NA19004.hp1
NA19005.hp1
NA19007.hp1
NA19009.hp1
NA19010.hp1
NA19011.hp1
NA19011.hp2
NA19030.hp1
NA19054.hp1
NA19056.hp1
NA19057.hp2
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19063.hp1
NA19064.hp1
NA19064.hp2
NA19066.hp1
NA19067.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19074.hp2
NA19076.hp1
NA19079.hp1
NA19080.hp1
NA19082.hp1
NA19084.hp1
NA19084.hp2
NA19087.hp2
NA19090.hp2
NA19091.hp1
NA19240.hp1
NA20129.hp2
NA20805.hp1
NA20905.hp1
 synonymous_variant LOW c.252A>G
c.252A>G
 p.Ser84Ser
p.Ser84Ser
 MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 3/13 339/2051 252/1821 84/606 chrX 54809928
chrX:54810072 A
A
 G
G
 12 a0001c0001
a0001c0003
a0001c0004
others(9): Show 
a0001c0001
a0001c0003
a0001c0004
a0001c0006
a0001c0008
a0001c0009
a0001c0010
a0002c0005
a0003c0007
a0004c0013
a0005c0012
a0006c0011
 193 HG00099.hp1
HG00140.hp1
HG00323.hp1
others(190): Show 
HG00099.hp1
HG00140.hp1
HG00323.hp1
HG00438.hp1
HG00438.hp2
HG00558.hp1
HG00558.hp2
HG00597.hp1
HG00609.hp1
HG00621.hp1
HG00639.hp1
HG00673.hp1
HG00735.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01070.hp1
HG01074.hp1
HG01081.hp1
HG01081.hp2
HG01109.hp1
HG01123.hp1
HG01123.hp2
HG01168.hp1
HG01169.hp1
HG01243.hp1
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01258.hp1
HG01261.hp1
HG01346.hp1
HG01358.hp1
HG01361.hp1
HG01516.hp2
HG01891.hp2
HG01934.hp1
HG01975.hp2
HG01981.hp1
HG01993.hp1
HG02015.hp1
HG02040.hp1
HG02055.hp1
HG02074.hp1
HG02080.hp1
HG02109.hp2
HG02129.hp1
HG02148.hp1
HG02155.hp1
HG02155.hp2
HG02165.hp2
HG02257.hp1
HG02258.hp1
HG02280.hp2
HG02293.hp2
HG02486.hp1
HG02559.hp1
HG02559.hp2
HG02572.hp1
HG02615.hp1
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02647.hp1
HG02683.hp2
HG02698.hp1
HG02717.hp1
HG02723.hp1
HG02723.hp2
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02895.hp1
HG02896.hp1
HG02897.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02970.hp1
HG02970.hp2
HG02976.hp1
HG02976.hp2
HG03098.hp1
HG03195.hp2
HG03209.hp1
HG03225.hp1
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp2
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03669.hp2
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03834.hp1
HG03942.hp1
HG04184.hp2
HG04204.hp1
HG04228.hp1
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18906.hp1
NA18906.hp2
NA18939.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18949.hp1
NA18950.hp2
NA18952.hp1
NA18957.hp1
NA18957.hp2
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18963.hp1
NA18965.hp1
NA18966.hp1
NA18967.hp1
NA18968.hp2
NA18969.hp2
NA18970.hp1
NA18971.hp1
NA18972.hp2
NA18973.hp1
NA18974.hp1
NA18975.hp1
NA18977.hp1
NA18978.hp1
NA18979.hp2
NA18980.hp2
NA18990.hp1
NA18992.hp1
NA18995.hp1
NA18998.hp1
NA18998.hp2
NA18999.hp2
NA19001.hp1
NA19001.hp2
NA19002.hp2
NA19003.hp1
NA19004.hp1
NA19005.hp1
NA19007.hp1
NA19009.hp1
NA19010.hp1
NA19011.hp1
NA19011.hp2
NA19030.hp1
NA19030.hp2
NA19054.hp1
NA19056.hp1
NA19057.hp2
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19063.hp1
NA19064.hp1
NA19064.hp2
NA19066.hp1
NA19067.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19074.hp2
NA19076.hp1
NA19079.hp1
NA19080.hp1
NA19082.hp1
NA19084.hp1
NA19084.hp2
NA19087.hp2
NA19090.hp2
NA19091.hp1
NA19240.hp1
NA20129.hp1
NA20129.hp2
NA20805.hp1
NA20905.hp1
 synonymous_variant LOW c.396A>G
c.396A>G
 p.Thr132Thr
p.Thr132Thr
 MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 3/13 483/2051 396/1821 132/606 chrX 54810072
chrX:54810156 C
C
 T
T
 1 a0001c0010
a0001c0010
 1 NA19030.hp2
NA19030.hp2
 synonymous_variant LOW c.480C>T
c.480C>T
 p.Ala160Ala
p.Ala160Ala
 MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 3/13 567/2051 480/1821 160/606 chrX 54810156
chrX:54810907 C
C
 T
T
 9 a0001c0001
a0001c0004
a0001c0006
others(6): Show 
a0001c0001
a0001c0004
a0001c0006
a0001c0009
a0002c0005
a0003c0007
a0004c0013
a0005c0012
a0006c0011
 175 HG00099.hp1
HG00140.hp1
HG00323.hp1
others(172): Show 
HG00099.hp1
HG00140.hp1
HG00323.hp1
HG00438.hp1
HG00438.hp2
HG00558.hp1
HG00558.hp2
HG00597.hp1
HG00609.hp1
HG00621.hp1
HG00639.hp1
HG00673.hp1
HG00735.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01070.hp1
HG01074.hp1
HG01081.hp1
HG01081.hp2
HG01109.hp1
HG01123.hp1
HG01123.hp2
HG01168.hp1
HG01169.hp1
HG01243.hp1
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01258.hp1
HG01261.hp1
HG01346.hp1
HG01358.hp1
HG01361.hp1
HG01516.hp2
HG01891.hp2
HG01934.hp1
HG01975.hp2
HG01981.hp1
HG01993.hp1
HG02015.hp1
HG02040.hp1
HG02055.hp1
HG02074.hp1
HG02080.hp1
HG02129.hp1
HG02148.hp1
HG02155.hp1
HG02155.hp2
HG02165.hp2
HG02258.hp1
HG02280.hp2
HG02293.hp2
HG02486.hp1
HG02559.hp1
HG02572.hp1
HG02622.hp1
HG02630.hp1
HG02683.hp2
HG02698.hp1
HG02717.hp1
HG02723.hp2
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02896.hp1
HG02897.hp1
HG02922.hp1
HG02922.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03098.hp1
HG03209.hp1
HG03225.hp1
HG03453.hp1
HG03486.hp2
HG03491.hp2
HG03492.hp1
HG03516.hp1
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03669.hp2
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03834.hp1
HG03942.hp1
HG04184.hp2
HG04204.hp1
HG04228.hp1
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18906.hp1
NA18939.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18949.hp1
NA18950.hp2
NA18952.hp1
NA18957.hp1
NA18957.hp2
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18963.hp1
NA18965.hp1
NA18966.hp1
NA18967.hp1
NA18968.hp2
NA18969.hp2
NA18970.hp1
NA18971.hp1
NA18972.hp2
NA18973.hp1
NA18974.hp1
NA18975.hp1
NA18977.hp1
NA18978.hp1
NA18979.hp2
NA18980.hp2
NA18990.hp1
NA18992.hp1
NA18995.hp1
NA18998.hp1
NA18998.hp2
NA18999.hp2
NA19001.hp1
NA19001.hp2
NA19002.hp2
NA19003.hp1
NA19004.hp1
NA19005.hp1
NA19007.hp1
NA19009.hp1
NA19010.hp1
NA19011.hp1
NA19011.hp2
NA19030.hp1
NA19054.hp1
NA19056.hp1
NA19057.hp2
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19063.hp1
NA19064.hp1
NA19064.hp2
NA19066.hp1
NA19067.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19074.hp2
NA19076.hp1
NA19079.hp1
NA19080.hp1
NA19082.hp1
NA19084.hp1
NA19084.hp2
NA19087.hp2
NA19090.hp2
NA19091.hp1
NA19240.hp1
NA20129.hp2
NA20805.hp1
NA20905.hp1
 synonymous_variant LOW c.624C>T
c.624C>T
 p.Ala208Ala
p.Ala208Ala
 MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 4/13 711/2051 624/1821 208/606 chrX 54810907
chrX:54811099 A
A
 G
G
 1 a0001c0008
a0001c0008
 1 HG02970.hp2
HG02970.hp2
 synonymous_variant LOW c.816A>G
c.816A>G
 p.Pro272Pro
p.Pro272Pro
 MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 4/13 903/2051 816/1821 272/606 chrX 54811099
chrX:54811644 C
C
 T
T
 7 a0001c0001
a0001c0004
a0001c0009
others(4): Show 
a0001c0001
a0001c0004
a0001c0009
a0003c0007
a0004c0013
a0005c0012
a0006c0011
 164 HG00099.hp1
HG00140.hp1
HG00323.hp1
others(161): Show 
HG00099.hp1
HG00140.hp1
HG00323.hp1
HG00438.hp1
HG00438.hp2
HG00558.hp1
HG00558.hp2
HG00597.hp1
HG00609.hp1
HG00621.hp1
HG00639.hp1
HG00673.hp1
HG00735.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01070.hp1
HG01074.hp1
HG01081.hp1
HG01081.hp2
HG01109.hp1
HG01123.hp1
HG01123.hp2
HG01168.hp1
HG01169.hp1
HG01243.hp1
HG01256.hp1
HG01257.hp1
HG01258.hp1
HG01261.hp1
HG01346.hp1
HG01358.hp1
HG01361.hp1
HG01516.hp2
HG01934.hp1
HG01975.hp2
HG01981.hp1
HG01993.hp1
HG02015.hp1
HG02040.hp1
HG02055.hp1
HG02074.hp1
HG02080.hp1
HG02129.hp1
HG02148.hp1
HG02155.hp1
HG02155.hp2
HG02165.hp2
HG02258.hp1
HG02280.hp2
HG02293.hp2
HG02486.hp1
HG02559.hp1
HG02622.hp1
HG02683.hp2
HG02698.hp1
HG02717.hp1
HG02723.hp2
HG02738.hp1
HG02809.hp1
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02896.hp1
HG02897.hp1
HG02922.hp2
HG02976.hp1
HG03098.hp1
HG03209.hp1
HG03225.hp1
HG03486.hp2
HG03491.hp2
HG03492.hp1
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03669.hp2
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03834.hp1
HG03942.hp1
HG04184.hp2
HG04204.hp1
HG04228.hp1
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18939.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18949.hp1
NA18950.hp2
NA18952.hp1
NA18957.hp1
NA18957.hp2
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18963.hp1
NA18965.hp1
NA18966.hp1
NA18967.hp1
NA18968.hp2
NA18969.hp2
NA18970.hp1
NA18971.hp1
NA18972.hp2
NA18973.hp1
NA18974.hp1
NA18975.hp1
NA18977.hp1
NA18978.hp1
NA18979.hp2
NA18980.hp2
NA18990.hp1
NA18992.hp1
NA18995.hp1
NA18998.hp1
NA18998.hp2
NA18999.hp2
NA19001.hp1
NA19001.hp2
NA19002.hp2
NA19003.hp1
NA19004.hp1
NA19005.hp1
NA19007.hp1
NA19009.hp1
NA19010.hp1
NA19011.hp1
NA19011.hp2
NA19030.hp1
NA19054.hp1
NA19056.hp1
NA19057.hp2
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19063.hp1
NA19064.hp1
NA19064.hp2
NA19066.hp1
NA19067.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19074.hp2
NA19076.hp1
NA19079.hp1
NA19080.hp1
NA19082.hp1
NA19084.hp1
NA19084.hp2
NA19087.hp2
NA19090.hp2
NA19091.hp1
NA19240.hp1
NA20129.hp2
NA20805.hp1
NA20905.hp1
 synonymous_variant LOW c.981C>T
c.981C>T
 p.Ser327Ser
p.Ser327Ser
 MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 6/13 1068/2051 981/1821 327/606 chrX 54811644
chrX:54815304 G
G
 A
A
 1 a0001c0004
a0001c0004
 9 HG00735.hp2
HG00741.hp1
HG00741.hp2
others(6): Show 
HG00735.hp2
HG00741.hp1
HG00741.hp2
HG01081.hp1
HG01123.hp1
HG01256.hp1
HG01346.hp1
HG01358.hp1
HG01361.hp1
 synonymous_variant LOW c.1443G>A
c.1443G>A
 p.Ala481Ala
p.Ala481Ala
 MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 12/13 1530/2051 1443/1821 481/606 chrX 54815304

chr:pos ref alt #
# of thapid:transcript level
 thapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos

chr:pos ref alt #
# of ghapid:genebody level
 ghapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid genebody_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chrX:54808072 G
G
 A
A
 1 a0001c0001t0001g0015
a0001c0001t0001g0015
 1 NA19001.hp2
NA19001.hp2
 intron_variant MODIFIER c.-30+270G>A
c.-30+270G>A
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 1/12 chrX 54808072
chrX:54808154 A
A
 G
G
 2 a0002c0005t0001g0008
a0002c0005t0001g0042
a0002c0005t0001g0008
a0002c0005t0001g0042
 7 HG01891.hp2
HG02572.hp1
HG02630.hp1
others(4): Show 
HG01891.hp2
HG02572.hp1
HG02630.hp1
HG02809.hp2
HG02976.hp2
HG03453.hp1
NA18906.hp1
 intron_variant MODIFIER c.-30+352A>G
c.-30+352A>G
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 1/12 chrX 54808154
chrX:54808480 GC
GC
 G
G
 1 a0001c0002t0001g0016
a0001c0002t0001g0016
 1 HG01168.hp2
HG01168.hp2
 intron_variant MODIFIER c.-30+682delC
c.-30+682delC
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 54808480
chrX:54808524 A
A
 C
C
 18 a0001c0001t0001g0001
a0001c0001t0001g0009
a0001c0001t0001g0014
others(15): Show 
a0001c0001t0001g0001
a0001c0001t0001g0009
a0001c0001t0001g0014
a0001c0001t0001g0015
a0001c0001t0001g0033
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0039
a0001c0001t0001g0040
a0001c0001t0001g0041
a0001c0002t0001g0037
a0001c0003t0001g0038
a0001c0004t0001g0001
a0001c0006t0001g0010
a0003c0007t0001g0001
a0004c0013t0001g0001
a0005c0012t0001g0034
a0006c0011t0001g0001
 149 HG00099.hp1
HG00140.hp1
HG00323.hp1
others(146): Show 
HG00099.hp1
HG00140.hp1
HG00323.hp1
HG00438.hp1
HG00438.hp2
HG00558.hp1
HG00558.hp2
HG00597.hp1
HG00609.hp1
HG00621.hp1
HG00639.hp1
HG00673.hp1
HG00735.hp2
HG00741.hp1
HG00741.hp2
HG01070.hp1
HG01074.hp1
HG01081.hp1
HG01081.hp2
HG01109.hp1
HG01123.hp1
HG01123.hp2
HG01168.hp1
HG01169.hp1
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01258.hp1
HG01261.hp1
HG01346.hp1
HG01358.hp1
HG01361.hp1
HG01516.hp2
HG01934.hp1
HG01975.hp2
HG01981.hp1
HG01993.hp1
HG02015.hp1
HG02027.hp1
HG02040.hp1
HG02055.hp1
HG02074.hp1
HG02080.hp1
HG02129.hp1
HG02148.hp1
HG02155.hp1
HG02155.hp2
HG02165.hp2
HG02293.hp2
HG02622.hp1
HG02622.hp2
HG02683.hp2
HG02698.hp1
HG02723.hp2
HG02738.hp1
HG02809.hp1
HG02818.hp1
HG02886.hp1
HG02896.hp1
HG02897.hp1
HG02922.hp1
HG02970.hp1
HG02976.hp1
HG03098.hp1
HG03209.hp1
HG03225.hp1
HG03491.hp2
HG03492.hp1
HG03516.hp1
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp2
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03834.hp1
HG03942.hp1
HG04184.hp2
HG04204.hp1
HG04228.hp1
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18939.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18949.hp1
NA18952.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18963.hp1
NA18965.hp1
NA18966.hp1
NA18967.hp1
NA18968.hp2
NA18969.hp2
NA18970.hp1
NA18971.hp1
NA18972.hp2
NA18973.hp1
NA18974.hp1
NA18975.hp1
NA18977.hp1
NA18978.hp1
NA18979.hp2
NA18980.hp2
NA18990.hp1
NA18992.hp1
NA18995.hp1
NA18998.hp1
NA18999.hp2
NA19001.hp1
NA19001.hp2
NA19002.hp2
NA19003.hp1
NA19004.hp1
NA19005.hp1
NA19010.hp1
NA19011.hp1
NA19030.hp1
NA19056.hp1
NA19057.hp2
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19063.hp1
NA19064.hp1
NA19064.hp2
NA19066.hp1
NA19067.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19074.hp2
NA19076.hp1
NA19079.hp1
NA19080.hp1
NA19082.hp1
NA19084.hp1
NA19084.hp2
NA19087.hp2
NA19091.hp1
NA19240.hp1
NA20805.hp1
NA20905.hp1
 intron_variant MODIFIER c.-30+722A>C
c.-30+722A>C
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 1/12 chrX 54808524
chrX:54808657 GT
GT
 G
G
 1 a0001c0001t0001g0014
a0001c0001t0001g0014
 2 HG03704.hp1
HG03704.hp2
HG03704.hp1
HG03704.hp2
 intron_variant MODIFIER c.-29-643delT
c.-29-643delT
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 54808657
chrX:54808758 A
A
 G
G
 1 a0001c0003t0001g0012
a0001c0003t0001g0012
 3 HG02615.hp1
HG02647.hp1
HG03453.hp2
HG02615.hp1
HG02647.hp1
HG03453.hp2
 intron_variant MODIFIER c.-29-545A>G
c.-29-545A>G
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 1/12 chrX 54808758
chrX:54808862 T
T
 C
C
 2 a0001c0001t0001g0005
a0001c0002t0001g0011
a0001c0001t0001g0005
a0001c0002t0001g0011
 11 HG01167.hp1
HG01169.hp2
HG01243.hp1
others(8): Show 
HG01167.hp1
HG01169.hp2
HG01243.hp1
HG02258.hp1
HG02280.hp2
HG02486.hp1
HG02559.hp1
HG02717.hp1
HG02818.hp2
HG02922.hp2
NA19240.hp2
 intron_variant MODIFIER c.-29-441T>C
c.-29-441T>C
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 1/12 chrX 54808862
chrX:54809016 C
C
 T
T
 1 a0001c0006t0001g0010
a0001c0006t0001g0010
 4 HG01255.hp1
HG02922.hp1
HG02970.hp1
others(1): Show 
HG01255.hp1
HG02922.hp1
HG02970.hp1
HG03516.hp1
 intron_variant MODIFIER c.-29-287C>T
c.-29-287C>T
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 1/12 chrX 54809016
chrX:54809047 TG
TG
 T
T
 1 a0001c0001t0001g0041
a0001c0001t0001g0041
 1 NA18975.hp1
NA18975.hp1
 intron_variant MODIFIER c.-29-250delG
c.-29-250delG
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 54809047
chrX:54809178 G
G
 T
T
 1 a0001c0001t0001g0040
a0001c0001t0001g0040
 1 HG02683.hp2
HG02683.hp2
 intron_variant MODIFIER c.-29-125G>T
c.-29-125G>T
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 1/12 chrX 54809178
chrX:54809195 A
A
 AG
AG
 1 a0001c0001t0001g0033
a0001c0001t0001g0033
 1 NA18999.hp2
NA18999.hp2
 intron_variant MODIFIER c.-29-103dupG
c.-29-103dupG
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 1/12 INFO_REALIGN_3_PRIME chrX 54809195
chrX:54809253 G
G
 T
T
 1 a0001c0001t0001g0039
a0001c0001t0001g0039
 1 HG02698.hp1
HG02698.hp1
 intron_variant MODIFIER c.-29-50G>T
c.-29-50G>T
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 1/12 chrX 54809253
chrX:54809436 C
C
 T
T
 1 a0001c0002t0001g0032
a0001c0002t0001g0032
 1 HG00733.hp2
HG00733.hp2
 intron_variant MODIFIER c.45+60C>T
c.45+60C>T
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 2/12 chrX 54809436
chrX:54809503 C
C
 T
T
 1 a0001c0002t0001g0031
a0001c0002t0001g0031
 1 NA18982.hp1
NA18982.hp1
 intron_variant MODIFIER c.45+127C>T
c.45+127C>T
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 2/12 chrX 54809503
chrX:54809669 G
G
 A
A
 1 a0001c0002t0001g0017
a0001c0002t0001g0017
 1 HG02630.hp2
HG02630.hp2
 intron_variant MODIFIER c.46-53G>A
c.46-53G>A
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 2/12 chrX 54809669
chrX:54811194 G
G
 A
A
 4 a0001c0003t0001g0006
a0001c0003t0001g0007
a0001c0003t0001g0012
others(1): Show 
a0001c0003t0001g0006
a0001c0003t0001g0007
a0001c0003t0001g0012
a0001c0010t0001g0018
 16 HG02109.hp2
HG02257.hp1
HG02559.hp2
others(13): Show 
HG02109.hp2
HG02257.hp1
HG02559.hp2
HG02615.hp1
HG02647.hp1
HG02723.hp1
HG02895.hp1
HG02897.hp2
HG03195.hp2
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03516.hp2
NA18906.hp2
NA19030.hp2
NA20129.hp1
 intron_variant MODIFIER c.847-56G>A
c.847-56G>A
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 4/12 chrX 54811194
chrX:54811547 G
G
 C
C
 1 a0002c0005t0001g0042
a0002c0005t0001g0042
 1 HG02809.hp2
HG02809.hp2
 intron_variant MODIFIER c.911-27G>C
c.911-27G>C
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 5/12 chrX 54811547
chrX:54811689 G
G
 C
C
 1 a0001c0002t0001g0013
a0001c0002t0001g0013
 2 NA18972.hp1
NA18973.hp2
NA18972.hp1
NA18973.hp2
 intron_variant MODIFIER c.990+36G>C
c.990+36G>C
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 6/12 chrX 54811689
chrX:54811794 G
G
 A
A
 1 a0001c0002t0001g0019
a0001c0002t0001g0019
 1 NA18975.hp2
NA18975.hp2
 intron_variant MODIFIER c.990+141G>A
c.990+141G>A
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 6/12 chrX 54811794
chrX:54811797 G
G
 T
T
 1 a0001c0002t0001g0030
a0001c0002t0001g0030
 1 HG02280.hp1
HG02280.hp1
 intron_variant MODIFIER c.990+144G>T
c.990+144G>T
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 6/12 chrX 54811797
chrX:54811919 C
C
 A
A
 21 a0001c0001t0001g0001
a0001c0001t0001g0004
a0001c0001t0001g0005
others(18): Show 
a0001c0001t0001g0001
a0001c0001t0001g0004
a0001c0001t0001g0005
a0001c0001t0001g0009
a0001c0001t0001g0014
a0001c0001t0001g0015
a0001c0001t0001g0020
a0001c0001t0001g0021
a0001c0001t0001g0033
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0039
a0001c0001t0001g0040
a0001c0001t0001g0041
a0001c0004t0001g0001
a0001c0006t0001g0010
a0001c0009t0001g0004
a0003c0007t0001g0001
a0004c0013t0001g0001
a0005c0012t0001g0034
a0006c0011t0001g0001
 168 HG00099.hp1
HG00140.hp1
HG00323.hp1
others(165): Show 
HG00099.hp1
HG00140.hp1
HG00323.hp1
HG00438.hp1
HG00438.hp2
HG00558.hp1
HG00558.hp2
HG00597.hp1
HG00609.hp1
HG00621.hp1
HG00639.hp1
HG00673.hp1
HG00735.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01070.hp1
HG01074.hp1
HG01081.hp1
HG01081.hp2
HG01109.hp1
HG01123.hp1
HG01123.hp2
HG01168.hp1
HG01169.hp1
HG01243.hp1
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01258.hp1
HG01261.hp1
HG01346.hp1
HG01358.hp1
HG01361.hp1
HG01516.hp2
HG01934.hp1
HG01975.hp2
HG01981.hp1
HG01993.hp1
HG02015.hp1
HG02040.hp1
HG02055.hp1
HG02074.hp1
HG02080.hp1
HG02129.hp1
HG02148.hp1
HG02155.hp1
HG02155.hp2
HG02165.hp2
HG02258.hp1
HG02280.hp2
HG02293.hp2
HG02486.hp1
HG02559.hp1
HG02622.hp1
HG02683.hp2
HG02698.hp1
HG02717.hp1
HG02723.hp2
HG02738.hp1
HG02809.hp1
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02896.hp1
HG02897.hp1
HG02922.hp1
HG02922.hp2
HG02970.hp1
HG02976.hp1
HG03098.hp1
HG03209.hp1
HG03225.hp1
HG03486.hp2
HG03491.hp2
HG03492.hp1
HG03516.hp1
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03669.hp2
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03834.hp1
HG03942.hp1
HG04184.hp2
HG04204.hp1
HG04228.hp1
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18939.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18949.hp1
NA18950.hp2
NA18952.hp1
NA18957.hp1
NA18957.hp2
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18963.hp1
NA18965.hp1
NA18966.hp1
NA18967.hp1
NA18968.hp2
NA18969.hp2
NA18970.hp1
NA18971.hp1
NA18972.hp2
NA18973.hp1
NA18974.hp1
NA18975.hp1
NA18977.hp1
NA18978.hp1
NA18979.hp2
NA18980.hp2
NA18990.hp1
NA18992.hp1
NA18995.hp1
NA18998.hp1
NA18998.hp2
NA18999.hp2
NA19001.hp1
NA19001.hp2
NA19002.hp2
NA19003.hp1
NA19004.hp1
NA19005.hp1
NA19007.hp1
NA19009.hp1
NA19010.hp1
NA19011.hp1
NA19011.hp2
NA19030.hp1
NA19054.hp1
NA19056.hp1
NA19057.hp2
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19063.hp1
NA19064.hp1
NA19064.hp2
NA19066.hp1
NA19067.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19074.hp2
NA19076.hp1
NA19079.hp1
NA19080.hp1
NA19082.hp1
NA19084.hp1
NA19084.hp2
NA19087.hp2
NA19090.hp2
NA19091.hp1
NA19240.hp1
NA20129.hp2
NA20805.hp1
NA20905.hp1
 intron_variant MODIFIER c.991-238C>A
c.991-238C>A
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 6/12 chrX 54811919
chrX:54811986 C
C
 A
A
 2 a0002c0005t0001g0008
a0002c0005t0001g0042
a0002c0005t0001g0008
a0002c0005t0001g0042
 7 HG01891.hp2
HG02572.hp1
HG02630.hp1
others(4): Show 
HG01891.hp2
HG02572.hp1
HG02630.hp1
HG02809.hp2
HG02976.hp2
HG03453.hp1
NA18906.hp1
 intron_variant MODIFIER c.991-171C>A
c.991-171C>A
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 6/12 chrX 54811986
chrX:54812004 G
G
 A
A
 21 a0001c0001t0001g0001
a0001c0001t0001g0004
a0001c0001t0001g0005
others(18): Show 
a0001c0001t0001g0001
a0001c0001t0001g0004
a0001c0001t0001g0005
a0001c0001t0001g0009
a0001c0001t0001g0014
a0001c0001t0001g0015
a0001c0001t0001g0020
a0001c0001t0001g0021
a0001c0001t0001g0033
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0039
a0001c0001t0001g0040
a0001c0001t0001g0041
a0001c0004t0001g0001
a0001c0006t0001g0010
a0001c0009t0001g0004
a0003c0007t0001g0001
a0004c0013t0001g0001
a0005c0012t0001g0034
a0006c0011t0001g0001
 168 HG00099.hp1
HG00140.hp1
HG00323.hp1
others(165): Show 
HG00099.hp1
HG00140.hp1
HG00323.hp1
HG00438.hp1
HG00438.hp2
HG00558.hp1
HG00558.hp2
HG00597.hp1
HG00609.hp1
HG00621.hp1
HG00639.hp1
HG00673.hp1
HG00735.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01070.hp1
HG01074.hp1
HG01081.hp1
HG01081.hp2
HG01109.hp1
HG01123.hp1
HG01123.hp2
HG01168.hp1
HG01169.hp1
HG01243.hp1
HG01255.hp1
HG01256.hp1
HG01257.hp1
HG01258.hp1
HG01261.hp1
HG01346.hp1
HG01358.hp1
HG01361.hp1
HG01516.hp2
HG01934.hp1
HG01975.hp2
HG01981.hp1
HG01993.hp1
HG02015.hp1
HG02040.hp1
HG02055.hp1
HG02074.hp1
HG02080.hp1
HG02129.hp1
HG02148.hp1
HG02155.hp1
HG02155.hp2
HG02165.hp2
HG02258.hp1
HG02280.hp2
HG02293.hp2
HG02486.hp1
HG02559.hp1
HG02622.hp1
HG02683.hp2
HG02698.hp1
HG02717.hp1
HG02723.hp2
HG02738.hp1
HG02809.hp1
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02896.hp1
HG02897.hp1
HG02922.hp1
HG02922.hp2
HG02970.hp1
HG02976.hp1
HG03098.hp1
HG03209.hp1
HG03225.hp1
HG03486.hp2
HG03491.hp2
HG03492.hp1
HG03516.hp1
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03669.hp2
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03834.hp1
HG03942.hp1
HG04184.hp2
HG04204.hp1
HG04228.hp1
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18939.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18949.hp1
NA18950.hp2
NA18952.hp1
NA18957.hp1
NA18957.hp2
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18963.hp1
NA18965.hp1
NA18966.hp1
NA18967.hp1
NA18968.hp2
NA18969.hp2
NA18970.hp1
NA18971.hp1
NA18972.hp2
NA18973.hp1
NA18974.hp1
NA18975.hp1
NA18977.hp1
NA18978.hp1
NA18979.hp2
NA18980.hp2
NA18990.hp1
NA18992.hp1
NA18995.hp1
NA18998.hp1
NA18998.hp2
NA18999.hp2
NA19001.hp1
NA19001.hp2
NA19002.hp2
NA19003.hp1
NA19004.hp1
NA19005.hp1
NA19007.hp1
NA19009.hp1
NA19010.hp1
NA19011.hp1
NA19011.hp2
NA19030.hp1
NA19054.hp1
NA19056.hp1
NA19057.hp2
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19063.hp1
NA19064.hp1
NA19064.hp2
NA19066.hp1
NA19067.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19074.hp2
NA19076.hp1
NA19079.hp1
NA19080.hp1
NA19082.hp1
NA19084.hp1
NA19084.hp2
NA19087.hp2
NA19090.hp2
NA19091.hp1
NA19240.hp1
NA20129.hp2
NA20805.hp1
NA20905.hp1
 intron_variant MODIFIER c.991-153G>A
c.991-153G>A
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 6/12 chrX 54812004
chrX:54812074 G
G
 A
A
 1 a0001c0002t0001g0022
a0001c0002t0001g0022
 1 HG03831.hp1
HG03831.hp1
 intron_variant MODIFIER c.991-83G>A
c.991-83G>A
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 6/12 chrX 54812074
chrX:54812352 A
A
 G
G
 1 a0001c0003t0001g0007
a0001c0003t0001g0007
 6 HG02559.hp2
HG03195.hp2
HG03471.hp1
others(3): Show 
HG02559.hp2
HG03195.hp2
HG03471.hp1
HG03486.hp1
HG03516.hp2
NA20129.hp1
 intron_variant MODIFIER c.1085+101A>G
c.1085+101A>G
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 7/12 chrX 54812352
chrX:54812373 C
C
 T
T
 1 a0001c0008t0001g0029
a0001c0008t0001g0029
 1 HG02970.hp2
HG02970.hp2
 intron_variant MODIFIER c.1085+122C>T
c.1085+122C>T
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 7/12 chrX 54812373
chrX:54812658 A
A
 G
G
 3 a0001c0001t0001g0005
a0001c0001t0001g0021
a0001c0006t0001g0010
a0001c0001t0001g0005
a0001c0001t0001g0021
a0001c0006t0001g0010
 13 HG00738.hp1
HG01243.hp1
HG01255.hp1
others(10): Show 
HG00738.hp1
HG01243.hp1
HG01255.hp1
HG02258.hp1
HG02280.hp2
HG02486.hp1
HG02559.hp1
HG02717.hp1
HG02818.hp2
HG02922.hp1
HG02922.hp2
HG02970.hp1
HG03516.hp1
 intron_variant MODIFIER c.1086-287A>G
c.1086-287A>G
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 7/12 chrX 54812658
chrX:54812661 GACTCAC
GACTCAC
 G
G
 3 a0001c0001t0001g0005
a0001c0001t0001g0021
a0001c0006t0001g0010
a0001c0001t0001g0005
a0001c0001t0001g0021
a0001c0006t0001g0010
 13 HG00738.hp1
HG01243.hp1
HG01255.hp1
others(10): Show 
HG00738.hp1
HG01243.hp1
HG01255.hp1
HG02258.hp1
HG02280.hp2
HG02486.hp1
HG02559.hp1
HG02717.hp1
HG02818.hp2
HG02922.hp1
HG02922.hp2
HG02970.hp1
HG03516.hp1
 intron_variant MODIFIER c.1086-282_1086-277d
others(8): Show 
c.1086-282_1086-277delCTCACA
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 7/12 INFO_REALIGN_3_PRIME chrX 54812661
chrX:54813072 C
C
 A
A
 2 a0001c0001t0001g0005
a0001c0001t0001g0021
a0001c0001t0001g0005
a0001c0001t0001g0021
 9 HG00738.hp1
HG01243.hp1
HG02258.hp1
others(6): Show 
HG00738.hp1
HG01243.hp1
HG02258.hp1
HG02280.hp2
HG02486.hp1
HG02559.hp1
HG02717.hp1
HG02818.hp2
HG02922.hp2
 intron_variant MODIFIER c.1166-46C>A
c.1166-46C>A
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 8/12 chrX 54813072
chrX:54813193 G
G
 A
A
 1 a0001c0002t0001g0023
a0001c0002t0001g0023
 1 HG01361.hp2
HG01361.hp2
 intron_variant MODIFIER c.1208+33G>A
c.1208+33G>A
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 9/12 chrX 54813193
chrX:54813282 G
G
 C
C
 2 a0001c0003t0001g0007
a0001c0010t0001g0018
a0001c0003t0001g0007
a0001c0010t0001g0018
 7 HG02559.hp2
HG03195.hp2
HG03471.hp1
others(4): Show 
HG02559.hp2
HG03195.hp2
HG03471.hp1
HG03486.hp1
HG03516.hp2
NA19030.hp2
NA20129.hp1
 intron_variant MODIFIER c.1208+122G>C
c.1208+122G>C
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 9/12 chrX 54813282
chrX:54813399 A
A
 G
G
 1 a0001c0002t0001g0028
a0001c0002t0001g0028
 1 homoSapiens_chm13v2.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.1209-89A>G
c.1209-89A>G
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 9/12 chrX 54813399
chrX:54813580 C
C
 T
T
 22 a0001c0001t0001g0001
a0001c0001t0001g0004
a0001c0001t0001g0005
others(19): Show 
a0001c0001t0001g0001
a0001c0001t0001g0004
a0001c0001t0001g0005
a0001c0001t0001g0009
a0001c0001t0001g0014
a0001c0001t0001g0015
a0001c0001t0001g0020
a0001c0001t0001g0021
a0001c0001t0001g0033
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0039
a0001c0001t0001g0040
a0001c0001t0001g0041
a0001c0004t0001g0001
a0001c0009t0001g0004
a0002c0005t0001g0008
a0002c0005t0001g0042
a0003c0007t0001g0001
a0004c0013t0001g0001
a0005c0012t0001g0034
a0006c0011t0001g0001
 171 HG00099.hp1
HG00140.hp1
HG00323.hp1
others(168): Show 
HG00099.hp1
HG00140.hp1
HG00323.hp1
HG00438.hp1
HG00438.hp2
HG00558.hp1
HG00558.hp2
HG00597.hp1
HG00609.hp1
HG00621.hp1
HG00639.hp1
HG00673.hp1
HG00735.hp2
HG00738.hp1
HG00741.hp1
HG00741.hp2
HG01070.hp1
HG01074.hp1
HG01081.hp1
HG01081.hp2
HG01109.hp1
HG01123.hp1
HG01123.hp2
HG01168.hp1
HG01169.hp1
HG01243.hp1
HG01256.hp1
HG01257.hp1
HG01258.hp1
HG01261.hp1
HG01346.hp1
HG01358.hp1
HG01361.hp1
HG01516.hp2
HG01891.hp2
HG01934.hp1
HG01975.hp2
HG01981.hp1
HG01993.hp1
HG02015.hp1
HG02040.hp1
HG02055.hp1
HG02074.hp1
HG02080.hp1
HG02129.hp1
HG02148.hp1
HG02155.hp1
HG02155.hp2
HG02165.hp2
HG02258.hp1
HG02280.hp2
HG02293.hp2
HG02486.hp1
HG02559.hp1
HG02572.hp1
HG02622.hp1
HG02630.hp1
HG02683.hp2
HG02698.hp1
HG02717.hp1
HG02723.hp2
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02896.hp1
HG02897.hp1
HG02922.hp2
HG02976.hp1
HG02976.hp2
HG03098.hp1
HG03209.hp1
HG03225.hp1
HG03453.hp1
HG03486.hp2
HG03491.hp2
HG03492.hp1
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03669.hp2
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03834.hp1
HG03942.hp1
HG04184.hp2
HG04204.hp1
HG04228.hp1
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18906.hp1
NA18939.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18949.hp1
NA18950.hp2
NA18952.hp1
NA18957.hp1
NA18957.hp2
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18963.hp1
NA18965.hp1
NA18966.hp1
NA18967.hp1
NA18968.hp2
NA18969.hp2
NA18970.hp1
NA18971.hp1
NA18972.hp2
NA18973.hp1
NA18974.hp1
NA18975.hp1
NA18977.hp1
NA18978.hp1
NA18979.hp2
NA18980.hp2
NA18990.hp1
NA18992.hp1
NA18995.hp1
NA18998.hp1
NA18998.hp2
NA18999.hp2
NA19001.hp1
NA19001.hp2
NA19002.hp2
NA19003.hp1
NA19004.hp1
NA19005.hp1
NA19007.hp1
NA19009.hp1
NA19010.hp1
NA19011.hp1
NA19011.hp2
NA19030.hp1
NA19054.hp1
NA19056.hp1
NA19057.hp2
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19063.hp1
NA19064.hp1
NA19064.hp2
NA19066.hp1
NA19067.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19074.hp2
NA19076.hp1
NA19079.hp1
NA19080.hp1
NA19082.hp1
NA19084.hp1
NA19084.hp2
NA19087.hp2
NA19090.hp2
NA19091.hp1
NA19240.hp1
NA20129.hp2
NA20805.hp1
NA20905.hp1
 intron_variant MODIFIER c.1271+30C>T
c.1271+30C>T
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 10/12 chrX 54813580
chrX:54813703 TG
TG
 T
T
 1 a0001c0002t0001g0024
a0001c0002t0001g0024
 1 NA19054.hp2
NA19054.hp2
 intron_variant MODIFIER c.1271+156delG
c.1271+156delG
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 10/12 INFO_REALIGN_3_PRIME chrX 54813703
chrX:54813712 G
G
 T
T
 1 a0001c0003t0001g0038
a0001c0003t0001g0038
 1 HG02622.hp2
HG02622.hp2
 intron_variant MODIFIER c.1271+162G>T
c.1271+162G>T
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 10/12 chrX 54813712
chrX:54813716 C
C
 CA
CA
 1 a0001c0002t0001g0024
a0001c0002t0001g0024
 1 NA19054.hp2
NA19054.hp2
 intron_variant MODIFIER c.1271+167dupA
c.1271+167dupA
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 10/12 INFO_REALIGN_3_PRIME chrX 54813716
chrX:54813731 G
G
 C
C
 2 a0001c0001t0001g0005
a0001c0001t0001g0021
a0001c0001t0001g0005
a0001c0001t0001g0021
 9 HG00738.hp1
HG01243.hp1
HG02258.hp1
others(6): Show 
HG00738.hp1
HG01243.hp1
HG02258.hp1
HG02280.hp2
HG02486.hp1
HG02559.hp1
HG02717.hp1
HG02818.hp2
HG02922.hp2
 intron_variant MODIFIER c.1271+181G>C
c.1271+181G>C
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 10/12 chrX 54813731
chrX:54813769 GT
GT
 G
G
 1 a0005c0012t0001g0034
a0005c0012t0001g0034
 1 NA18974.hp1
NA18974.hp1
 intron_variant MODIFIER c.1271+221delT
c.1271+221delT
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 10/12 INFO_REALIGN_3_PRIME chrX 54813769
chrX:54813832 G
G
 C
C
 1 a0001c0002t0001g0025
a0001c0002t0001g0025
 1 HG01257.hp2
HG01257.hp2
 intron_variant MODIFIER c.1271+282G>C
c.1271+282G>C
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 10/12 chrX 54813832
chrX:54813859 A
A
 AG
AG
 1 a0005c0012t0001g0034
a0005c0012t0001g0034
 1 NA18974.hp1
NA18974.hp1
 intron_variant MODIFIER c.1271+311dupG
c.1271+311dupG
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 10/12 INFO_REALIGN_3_PRIME chrX 54813859
chrX:54813952 G
G
 A
A
 3 a0001c0002t0001g0003
a0001c0002t0001g0011
a0001c0002t0001g0017
a0001c0002t0001g0003
a0001c0002t0001g0011
a0001c0002t0001g0017
 17 HG00735.hp1
HG01167.hp1
HG01169.hp2
others(14): Show 
HG00735.hp1
HG01167.hp1
HG01169.hp2
HG01884.hp1
HG01884.hp2
HG01891.hp1
HG02109.hp1
HG02257.hp2
HG02630.hp2
HG02886.hp2
HG02896.hp2
HG03041.hp1
HG03130.hp1
HG06807.hp1
NA19043.hp1
NA19240.hp2
NA20300.hp1
 intron_variant MODIFIER c.1271+402G>A
c.1271+402G>A
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 10/12 chrX 54813952
chrX:54814097 AG
AG
 A
A
 1 a0005c0012t0001g0034
a0005c0012t0001g0034
 1 NA18974.hp1
NA18974.hp1
 intron_variant MODIFIER c.1271+550delG
c.1271+550delG
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 10/12 INFO_REALIGN_3_PRIME chrX 54814097
chrX:54814233 AACAC
AACAC
 A
A
 1 a0001c0001t0001g0005
a0001c0001t0001g0005
 8 HG01243.hp1
HG02258.hp1
HG02280.hp2
others(5): Show 
HG01243.hp1
HG02258.hp1
HG02280.hp2
HG02486.hp1
HG02559.hp1
HG02717.hp1
HG02818.hp2
HG02922.hp2
 intron_variant MODIFIER c.1272-422_1272-419d
others(6): Show 
c.1272-422_1272-419delCACA
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 10/12 INFO_REALIGN_3_PRIME chrX 54814233
chrX:54814237 C
C
 CA
CA
 1 a0005c0012t0001g0034
a0005c0012t0001g0034
 1 NA18974.hp1
NA18974.hp1
 intron_variant MODIFIER c.1272-423dupA
c.1272-423dupA
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 10/12 INFO_REALIGN_3_PRIME chrX 54814237
chrX:54814334 TG
TG
 T
T
 1 a0005c0012t0001g0034
a0005c0012t0001g0034
 1 NA18974.hp1
NA18974.hp1
 intron_variant MODIFIER c.1272-324delG
c.1272-324delG
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 10/12 INFO_REALIGN_3_PRIME chrX 54814334
chrX:54814486 C
C
 T
T
 2 a0001c0001t0001g0009
a0001c0001t0001g0020
a0001c0001t0001g0009
a0001c0001t0001g0020
 6 HG02818.hp1
HG02886.hp1
HG03098.hp1
others(3): Show 
HG02818.hp1
HG02886.hp1
HG03098.hp1
HG03209.hp1
HG03579.hp1
NA20129.hp2
 intron_variant MODIFIER c.1272-175C>T
c.1272-175C>T
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 10/12 chrX 54814486
chrX:54814579 G
G
 GC
GC
 1 a0005c0012t0001g0034
a0005c0012t0001g0034
 1 NA18974.hp1
NA18974.hp1
 intron_variant MODIFIER c.1272-80dupC
c.1272-80dupC
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 10/12 INFO_REALIGN_3_PRIME chrX 54814579
chrX:54814779 AT
AT
 A
A
 1 a0005c0012t0001g0034
a0005c0012t0001g0034
 1 NA18974.hp1
NA18974.hp1
 splice_region_variant&intron_variant LOW c.1386+6delT
c.1386+6delT
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 11/12 INFO_REALIGN_3_PRIME chrX 54814779
chrX:54814830 TG
TG
 T
T
 1 a0005c0012t0001g0034
a0005c0012t0001g0034
 1 NA18974.hp1
NA18974.hp1
 intron_variant MODIFIER c.1386+59delG
c.1386+59delG
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 11/12 INFO_REALIGN_3_PRIME chrX 54814830
chrX:54814955 A
A
 AT
AT
 1 a0005c0012t0001g0034
a0005c0012t0001g0034
 1 NA18974.hp1
NA18974.hp1
 intron_variant MODIFIER c.1386+182dupT
c.1386+182dupT
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 11/12 INFO_REALIGN_3_PRIME chrX 54814955
chrX:54815024 G
G
 A
A
 18 a0001c0001t0001g0001
a0001c0001t0001g0004
a0001c0001t0001g0009
others(15): Show 
a0001c0001t0001g0001
a0001c0001t0001g0004
a0001c0001t0001g0009
a0001c0001t0001g0014
a0001c0001t0001g0015
a0001c0001t0001g0020
a0001c0001t0001g0033
a0001c0001t0001g0035
a0001c0001t0001g0036
a0001c0001t0001g0039
a0001c0001t0001g0040
a0001c0001t0001g0041
a0001c0004t0001g0001
a0001c0009t0001g0004
a0003c0007t0001g0001
a0004c0013t0001g0001
a0005c0012t0001g0034
a0006c0011t0001g0001
 155 HG00099.hp1
HG00140.hp1
HG00323.hp1
others(152): Show 
HG00099.hp1
HG00140.hp1
HG00323.hp1
HG00438.hp1
HG00438.hp2
HG00558.hp1
HG00558.hp2
HG00597.hp1
HG00609.hp1
HG00621.hp1
HG00639.hp1
HG00673.hp1
HG00735.hp2
HG00741.hp1
HG00741.hp2
HG01070.hp1
HG01074.hp1
HG01081.hp1
HG01081.hp2
HG01109.hp1
HG01123.hp1
HG01123.hp2
HG01168.hp1
HG01169.hp1
HG01256.hp1
HG01257.hp1
HG01258.hp1
HG01261.hp1
HG01346.hp1
HG01358.hp1
HG01361.hp1
HG01516.hp2
HG01934.hp1
HG01975.hp2
HG01981.hp1
HG01993.hp1
HG02015.hp1
HG02040.hp1
HG02055.hp1
HG02074.hp1
HG02080.hp1
HG02129.hp1
HG02148.hp1
HG02155.hp1
HG02155.hp2
HG02165.hp2
HG02293.hp2
HG02622.hp1
HG02683.hp2
HG02698.hp1
HG02723.hp2
HG02738.hp1
HG02809.hp1
HG02818.hp1
HG02886.hp1
HG02896.hp1
HG02897.hp1
HG02976.hp1
HG03098.hp1
HG03209.hp1
HG03225.hp1
HG03486.hp2
HG03491.hp2
HG03492.hp1
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03669.hp1
HG03669.hp2
HG03704.hp1
HG03704.hp2
HG03710.hp1
HG03834.hp1
HG03942.hp1
HG04184.hp2
HG04204.hp1
HG04228.hp1
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18939.hp2
NA18943.hp1
NA18944.hp1
NA18945.hp1
NA18948.hp1
NA18949.hp1
NA18950.hp2
NA18952.hp1
NA18957.hp1
NA18957.hp2
NA18960.hp1
NA18961.hp1
NA18962.hp1
NA18963.hp1
NA18965.hp1
NA18966.hp1
NA18967.hp1
NA18968.hp2
NA18969.hp2
NA18970.hp1
NA18971.hp1
NA18972.hp2
NA18973.hp1
NA18974.hp1
NA18975.hp1
NA18977.hp1
NA18978.hp1
NA18979.hp2
NA18980.hp2
NA18990.hp1
NA18992.hp1
NA18995.hp1
NA18998.hp1
NA18998.hp2
NA18999.hp2
NA19001.hp1
NA19001.hp2
NA19002.hp2
NA19003.hp1
NA19004.hp1
NA19005.hp1
NA19007.hp1
NA19009.hp1
NA19010.hp1
NA19011.hp1
NA19011.hp2
NA19030.hp1
NA19054.hp1
NA19056.hp1
NA19057.hp2
NA19058.hp1
NA19060.hp1
NA19062.hp1
NA19063.hp1
NA19064.hp1
NA19064.hp2
NA19066.hp1
NA19067.hp1
NA19068.hp1
NA19070.hp1
NA19072.hp1
NA19074.hp2
NA19076.hp1
NA19079.hp1
NA19080.hp1
NA19082.hp1
NA19084.hp1
NA19084.hp2
NA19087.hp2
NA19090.hp2
NA19091.hp1
NA19240.hp1
NA20129.hp2
NA20805.hp1
NA20905.hp1
 intron_variant MODIFIER c.1387-224G>A
c.1387-224G>A
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 11/12 chrX 54815024
chrX:54815071 G
G
 GA
GA
 1 a0005c0012t0001g0034
a0005c0012t0001g0034
 1 NA18974.hp1
NA18974.hp1
 intron_variant MODIFIER c.1387-177_1387-176i
others(3): Show 
c.1387-177_1387-176insA
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 11/12 chrX 54815071
chrX:54815077 A
A
 AC
AC
 1 a0005c0012t0001g0034
a0005c0012t0001g0034
 1 NA18974.hp1
NA18974.hp1
 intron_variant MODIFIER c.1387-170dupC
c.1387-170dupC
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 11/12 INFO_REALIGN_3_PRIME chrX 54815077
chrX:54815078 C
C
 A
A
 2 a0001c0001t0001g0005
a0001c0001t0001g0021
a0001c0001t0001g0005
a0001c0001t0001g0021
 9 HG00738.hp1
HG01243.hp1
HG02258.hp1
others(6): Show 
HG00738.hp1
HG01243.hp1
HG02258.hp1
HG02280.hp2
HG02486.hp1
HG02559.hp1
HG02717.hp1
HG02818.hp2
HG02922.hp2
 intron_variant MODIFIER c.1387-170C>A
c.1387-170C>A
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 11/12 chrX 54815078
chrX:54815122 T
T
 A
A
 1 a0001c0002t0001g0026
a0001c0002t0001g0026
 1 HG01192.hp1
HG01192.hp1
 intron_variant MODIFIER c.1387-126T>A
c.1387-126T>A
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 11/12 chrX 54815122
chrX:54815125 C
C
 T
T
 1 a0001c0001t0001g0036
a0001c0001t0001g0036
 1 HG04228.hp1
HG04228.hp1
 intron_variant MODIFIER c.1387-123C>T
c.1387-123C>T
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 11/12 chrX 54815125
chrX:54815135 G
G
 GA
GA
 2 a0001c0001t0001g0005
a0001c0001t0001g0021
a0001c0001t0001g0005
a0001c0001t0001g0021
 9 HG00738.hp1
HG01243.hp1
HG02258.hp1
others(6): Show 
HG00738.hp1
HG01243.hp1
HG02258.hp1
HG02280.hp2
HG02486.hp1
HG02559.hp1
HG02717.hp1
HG02818.hp2
HG02922.hp2
 intron_variant MODIFIER c.1387-113_1387-112i
others(3): Show 
c.1387-113_1387-112insA
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 11/12 chrX 54815135
chrX:54815179 A
A
 G
G
 1 a0001c0001t0001g0035
a0001c0001t0001g0035
 1 NA18948.hp1
NA18948.hp1
 intron_variant MODIFIER c.1387-69A>G
c.1387-69A>G
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 11/12 chrX 54815179
chrX:54815202 TG
TG
 T
T
 1 a0005c0012t0001g0034
a0005c0012t0001g0034
 1 NA18974.hp1
NA18974.hp1
 intron_variant MODIFIER c.1387-44delG
c.1387-44delG
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 11/12 INFO_REALIGN_3_PRIME chrX 54815202
chrX:54815697 G
G
 GC
GC
 1 a0005c0012t0001g0034
a0005c0012t0001g0034
 1 NA18974.hp1
NA18974.hp1
 intron_variant MODIFIER c.*8+9dupC
c.*8+9dupC
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 12/12 INFO_REALIGN_3_PRIME chrX 54815697
chrX:54815845 A
A
 G
G
 2 a0001c0002t0001g0027
a0001c0006t0001g0010
a0001c0002t0001g0027
a0001c0006t0001g0010
 5 HG01255.hp1
HG02922.hp1
HG02970.hp1
others(2): Show 
HG01255.hp1
HG02922.hp1
HG02970.hp1
HG03516.hp1
HG03834.hp2
 intron_variant MODIFIER c.*9-36A>G
c.*9-36A>G
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 12/12 chrX 54815845
chrX:54815873 G
G
 GT
GT
 1 a0005c0012t0001g0034
a0005c0012t0001g0034
 1 NA18974.hp1
NA18974.hp1
 splice_region_variant&intron_variant LOW c.*9-4dupT
c.*9-4dupT
MAGED2 ENSG00000102316.17 transcript ENST00000375068.6 protein_coding 12/12 INFO_REALIGN_3_PRIME chrX 54815873

  • GeneCards
  • OpenTarget
  • The Human Protein Atlas
  • Gnomad v4.1.0
  • PhewebJP (Japan)
  • UKB-TOPMed (UMich) (UK and US)
  • FinnGen r11 (Finland)
  • KoGES (Korean)
  • Mouse Phenotype
  • Zebra Phenotype
  • TogoVar

  • DNA
  • Satellite
  • All Snps 1.4.2
  • RC
  • snRNA
  • SINE
  • GC %
  • Simple_repeat
  • RNA
  • Retroposon
  • Unknown
  • Low_complexity
  • LINE
  • scRNA
  • CpG Islands
  • Phastcons (20 way)
  • srpRNA
  • Common Snps 1.4.2
  • rRNA
  • LTR
  • tRNA

  • Axiom Genome-Wide Array (Japonica Array V1)
  • Axiom Genome-Wide Array (Japonica Array V2)
  • Axiom Genome-Wide ASI Array V1 (ASI V1)
​

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