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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

  Error connecting to IGV?   SPATA1_chr1_84501386_84572379  SPATA1_chr1_84501386_84572379 (clean+top1000)

Multiple Alignments (by translate haplotype frequency)Multiple Alignments (by aa haplotype frequency) Multiple Alignments (by translate haplotype similarity)Multiple Alignments (by aa haplotype similarity)

Item Value
geneid 100505741
ensemblid ENSG00000122432.19
hgncid 14682
symbol SPATA1
name spermatogenesis associated 1
refseq_nuc NM_001397487.1
refseq_prot NP_001384416.1
ensembl_nuc ENST00000699524.1
ensembl_prot ENSP00000514414.1
mane_status MANE Select
chr chr1
start 84506386
end 84567379
strand +
ver v1.2
region chr1:84506386-84567379
region5000 chr1:84501386-84572379
regionname0 SPATA1_chr1_84506386_84567379
regionname5000 SPATA1_chr1_84501386_84572379

ahapid grch38/
chm13v2 		alen total AFR AMR EAS EUR SAS JPT regionname genename aa chr start end
a0001 1/1 440 185 39 34 87 8 15 69 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0002 0/0 440 84 17 12 45 1 9 33 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0003 0/0 440 21 11 6 0 1 3 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0004 0/0 440 19 19 0 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0005 0/0 440 1 0 0 0 0 1 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0006 0/0 440 1 0 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0007 0/0 440 1 0 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379

chapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
c0001 1/1 1323 136 19 26 71 5 13 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
c0002 0/0 1323 84 17 12 45 1 9 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
c0003 0/0 1323 44 15 8 16 3 2 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
c0004 0/0 1323 21 11 6 0 1 3 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
c0005 0/0 1323 19 19 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
c0006 0/0 1323 5 5 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
c0007 0/0 1323 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
c0008 0/0 1323 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
c0009 0/0 1323 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379

thapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
t0001 1/1 1661 178 47 33 71 8 17 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
t0002 0/0 1661 34 0 0 32 0 2 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
t0003 0/0 1661 30 10 6 7 1 6 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
t0004 0/0 1662 25 6 6 11 1 1 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
t0005 0/0 1661 12 6 6 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
t0006 0/0 1661 9 9 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
t0007 0/0 1661 9 2 3 4 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
t0008 0/0 1661 4 4 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
t0009 0/0 1662 3 0 0 3 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
t0010 0/0 1661 2 0 0 2 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
t0011 0/0 1661 2 0 0 2 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
t0012 0/0 1661 2 0 0 0 0 2 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
t0013 0/0 1661 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
t0014 0/0 1661 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379

ghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
g0001 0/0 8 0 0 8 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0002 0/0 5 0 2 3 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0003 0/0 4 0 0 4 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0004 0/0 3 3 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0005 0/0 3 3 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0006 0/0 3 0 0 3 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0007 0/0 3 0 0 3 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0008 0/0 3 0 0 3 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0009 0/0 3 0 1 0 1 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0010 0/0 2 2 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0011 0/0 2 2 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0012 0/0 2 2 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0013 0/0 2 0 0 2 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0014 0/0 2 0 2 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0015 0/0 2 2 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0016 0/0 2 2 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0017 0/0 2 0 2 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0018 0/0 2 0 0 2 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0019 0/0 2 0 0 2 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0020 0/0 2 1 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0021 0/0 2 0 0 2 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0022 0/0 2 0 2 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0023 0/0 2 0 2 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0024 0/0 2 2 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0025 0/0 2 0 0 2 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0026 0/0 2 0 0 1 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0027 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0028 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0029 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0030 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0031 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0032 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0033 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0034 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0035 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0036 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0037 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0038 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0039 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0040 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0041 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0042 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0043 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0044 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0045 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0046 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0047 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0048 0/0 1 0 0 0 1 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0049 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0050 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0051 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0052 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0053 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0054 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0055 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0056 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0057 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0058 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0059 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0060 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0061 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0062 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0063 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0064 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0065 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0066 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0067 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0068 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0069 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0070 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0071 0/0 1 0 0 0 1 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0072 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0073 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0074 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0075 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0076 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0077 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0078 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0079 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0080 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0081 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0082 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0083 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0084 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0085 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0086 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0087 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0088 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0089 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0090 0/0 1 0 0 0 1 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0091 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0092 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0093 0/0 1 0 0 0 1 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0094 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0095 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0096 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0097 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0098 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0099 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0100 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0101 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0102 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0103 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0104 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0105 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0106 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0107 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0108 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0109 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0110 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0111 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0112 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0113 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0114 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0115 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0116 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0117 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0118 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0119 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0120 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0121 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0122 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0123 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0124 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0125 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0126 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0127 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0128 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0129 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0130 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0131 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0132 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0133 0/0 1 0 0 0 1 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0134 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0135 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0136 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0137 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0138 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0139 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0140 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0141 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0142 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0143 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0144 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0145 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0146 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0147 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0148 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0149 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0150 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0151 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0152 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0153 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0154 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0155 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0156 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0157 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0158 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0159 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0160 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0161 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0162 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0163 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0164 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0165 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0166 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0167 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0168 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0169 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0170 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0171 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0172 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0173 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0174 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0175 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0176 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0177 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0178 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0179 0/0 1 0 0 0 1 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0180 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0181 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0182 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0183 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0184 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0185 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0186 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0187 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0188 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0189 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0190 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0191 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0192 0/0 1 0 0 0 1 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0193 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0194 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0195 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0196 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0197 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0198 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0199 0/0 1 0 0 0 1 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0200 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0201 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0202 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0203 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0204 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0205 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0206 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0207 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0208 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0209 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0210 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0211 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0212 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0213 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0214 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0215 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0216 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0217 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0218 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0219 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0220 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0221 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0222 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0223 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0224 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0225 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0226 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0227 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0228 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0229 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0230 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0231 0/0 1 0 0 0 1 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0232 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0233 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0234 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0235 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0236 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0237 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0238 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0239 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0240 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0241 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0242 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0243 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0244 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0245 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0246 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0247 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0248 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0249 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0250 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0251 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0252 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0253 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0254 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0255 1/0 1 0 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0256 0/1 1 0 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0257 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0258 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0259 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0260 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0261 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0262 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0263 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0264 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0265 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0266 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0267 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0268 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
g0269 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379

achapid grch38/
chm13v2 		alen clen total AFR AMR EAS EUR SAS regionname genename cseq chr start end
a0001c0001 1/1 1323 136 19 26 71 5 13 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0001c0003 0/0 1323 44 15 8 16 3 2 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0001c0006 0/0 1323 5 5 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0002c0002 0/0 1323 84 17 12 45 1 9 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0003c0004 0/0 1323 21 11 6 0 1 3 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0004c0005 0/0 1323 19 19 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0005c0009 0/0 1323 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0006c0007 0/0 1323 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0007c0008 0/0 1323 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379

acthapid grch38
chm13v2 		tlen total AFR AMR EAS EUR SAS regionname genename tseq chr start end
a0001c0001t0001 1/1 2983 130 17 23 70 5 13 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0001c0001t0007 0/0 2983 4 1 3 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0001c0001t0009 0/0 2984 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0001c0001t0013 0/0 2983 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0001c0003t0001 0/0 2983 7 1 2 1 2 1 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0001c0003t0003 0/0 2983 3 3 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0001c0003t0004 0/0 2984 25 6 6 11 1 1 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0001c0003t0006 0/0 2983 5 5 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0001c0003t0009 0/0 2984 2 0 0 2 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0001c0003t0011 0/0 2983 2 0 0 2 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0001c0006t0008 0/0 2983 4 4 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0001c0006t0014 0/0 2983 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0002c0002t0002 0/0 2983 34 0 0 32 0 2 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0002c0002t0003 0/0 2983 27 7 6 7 1 6 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0002c0002t0005 0/0 2983 12 6 6 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0002c0002t0006 0/0 2983 3 3 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0002c0002t0007 0/0 2983 5 1 0 4 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0002c0002t0010 0/0 2983 2 0 0 2 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0002c0002t0012 0/0 2983 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0003c0004t0001 0/0 2983 20 10 6 0 1 3 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0003c0004t0006 0/0 2983 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0004c0005t0001 0/0 2983 19 19 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0005c0009t0012 0/0 2983 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0006c0007t0001 0/0 2983 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379
a0007c0008t0001 0/0 2983 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 copy fasta chr1 84501386 84572379

actghapid grch38/
chm13v2 		total AFR AMR EAS EUR SAS regionname genename chr start end
a0001c0001t0001g0001 0/0 8 0 0 8 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0003 0/0 4 0 0 4 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0008 0/0 3 0 0 3 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0009 0/0 3 0 1 0 1 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0025 0/0 2 0 0 2 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0026 0/0 2 0 0 1 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0060 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0156 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0157 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0158 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0159 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0160 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0161 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0162 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0163 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0164 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0166 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0167 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0168 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0169 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0170 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0171 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0172 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0173 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0174 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0175 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0176 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0177 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0178 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0179 0/0 1 0 0 0 1 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0180 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0181 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0182 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0183 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0184 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0185 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0186 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0187 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0188 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0189 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0190 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0191 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0192 0/0 1 0 0 0 1 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0193 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0194 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0195 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0196 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0197 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0198 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0199 0/0 1 0 0 0 1 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0200 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0201 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0202 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0203 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0204 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0205 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0206 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0207 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0208 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0209 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0210 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0211 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0212 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0213 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0214 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0215 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0216 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0217 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0218 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0219 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0220 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0221 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0222 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0223 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0224 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0225 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0226 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0227 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0228 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0230 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0231 0/0 1 0 0 0 1 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0232 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0233 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0234 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0235 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0236 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0237 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0238 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0239 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0240 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0241 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0243 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0244 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0245 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0246 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0247 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0248 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0249 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0250 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0251 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0252 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0253 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0254 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0255 1/0 1 0 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0256 0/1 1 0 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0257 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0258 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0259 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0264 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0265 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0266 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0267 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0268 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0001g0269 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0007g0017 0/0 2 0 2 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0007g0095 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0007g0127 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0009g0229 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0001t0013g0165 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0001g0075 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0001g0088 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0001g0089 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0001g0090 0/0 1 0 0 0 1 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0001g0091 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0001g0092 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0001g0093 0/0 1 0 0 0 1 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0003g0102 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0003g0105 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0003g0110 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0004g0002 0/0 5 0 2 3 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0004g0040 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0004g0041 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0004g0042 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0004g0043 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0004g0044 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0004g0045 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0004g0046 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0004g0047 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0004g0048 0/0 1 0 0 0 1 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0004g0049 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0004g0050 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0004g0051 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0004g0052 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0004g0053 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0004g0054 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0004g0055 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0004g0056 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0004g0057 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0004g0058 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0004g0059 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0006g0004 0/0 3 3 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0006g0027 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0006g0028 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0009g0013 0/0 2 0 0 2 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0011g0260 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0003t0011g0261 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0006t0008g0016 0/0 2 2 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0006t0008g0086 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0006t0008g0087 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0001c0006t0014g0061 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0002g0006 0/0 3 0 0 3 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0002g0007 0/0 3 0 0 3 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0002g0018 0/0 2 0 0 2 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0002g0019 0/0 2 0 0 2 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0002g0085 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0002g0094 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0002g0099 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0002g0101 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0002g0111 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0002g0112 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0002g0113 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0002g0114 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0002g0115 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0002g0116 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0002g0117 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0002g0118 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0002g0119 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0002g0120 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0002g0121 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0002g0122 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0002g0123 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0002g0124 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0002g0125 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0002g0126 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0002g0134 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0002g0135 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0002g0144 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0002g0145 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0003g0020 0/0 2 1 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0003g0021 0/0 2 0 0 2 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0003g0096 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0003g0097 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0003g0098 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0003g0103 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0003g0104 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0003g0107 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0003g0108 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0003g0109 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0003g0128 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0003g0132 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0003g0133 0/0 1 0 0 0 1 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0003g0136 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0003g0137 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0003g0138 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0003g0139 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0003g0140 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0003g0141 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0003g0142 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0003g0143 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0003g0146 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0003g0149 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0003g0262 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0003g0263 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0005g0022 0/0 2 0 2 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0005g0023 0/0 2 0 2 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0005g0024 0/0 2 2 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0005g0150 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0005g0151 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0005g0152 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0005g0153 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0005g0154 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0005g0155 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0006g0062 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0006g0063 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0006g0084 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0007g0100 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0007g0106 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0007g0129 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0007g0130 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0007g0131 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0010g0147 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0010g0148 0/0 1 0 0 1 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0002c0002t0012g0082 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0003c0004t0001g0014 0/0 2 0 2 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0003c0004t0001g0015 0/0 2 2 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0003c0004t0001g0064 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0003c0004t0001g0065 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0003c0004t0001g0066 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0003c0004t0001g0067 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0003c0004t0001g0069 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0003c0004t0001g0070 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0003c0004t0001g0071 0/0 1 0 0 0 1 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0003c0004t0001g0072 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0003c0004t0001g0073 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0003c0004t0001g0074 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0003c0004t0001g0076 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0003c0004t0001g0077 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0003c0004t0001g0078 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0003c0004t0001g0079 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0003c0004t0001g0080 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0003c0004t0001g0081 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0003c0004t0006g0068 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0004c0005t0001g0005 0/0 3 3 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0004c0005t0001g0010 0/0 2 2 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0004c0005t0001g0011 0/0 2 2 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0004c0005t0001g0012 0/0 2 2 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0004c0005t0001g0029 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0004c0005t0001g0030 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0004c0005t0001g0031 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0004c0005t0001g0032 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0004c0005t0001g0033 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0004c0005t0001g0034 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0004c0005t0001g0036 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0004c0005t0001g0037 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0004c0005t0001g0038 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0004c0005t0001g0039 0/0 1 1 0 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0005c0009t0012g0083 0/0 1 0 0 0 0 1 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0006c0007t0001g0035 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
a0007c0008t0001g0242 0/0 1 0 1 0 0 0 SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379

sampleid ID
haplotypeid
 ahapid chapid thapid ghapid gpopname popname regionname genename chr start end
HG00140 hp1 a0001 c0003 t0004 g0048 EUR GBR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG00140 hp2 a0001 c0001 t0001 g0199 EUR GBR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG00280 hp1 a0002 c0002 t0003 g0133 EUR FIN SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG00280 hp2 a0001 c0001 t0001 g0192 EUR FIN SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG00408 hp1 a0002 c0002 t0003 g0128 EAS CHS SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG00408 hp2 a0001 c0001 t0001 g0001 EAS CHS SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG00438 hp1 a0002 c0002 t0002 g0085 EAS CHS SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG00438 hp2 a0001 c0001 t0001 g0264 EAS CHS SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG00544 hp1 a0002 c0002 t0002 g0113 EAS CHS SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG00544 hp2 a0001 c0001 t0001 g0250 EAS CHS SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG00597 hp1 a0001 c0001 t0001 g0247 EAS CHS SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG00597 hp2 a0001 c0003 t0004 g0002 EAS CHS SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG00609 hp1 a0002 c0002 t0003 g0021 EAS CHS SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG00609 hp2 a0001 c0001 t0001 g0267 EAS CHS SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG00621 hp1 a0001 c0003 t0004 g0044 EAS CHS SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG00621 hp2 a0002 c0002 t0003 g0138 EAS CHS SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG00639 hp1 a0001 c0003 t0004 g0002 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG00639 hp2 a0006 c0007 t0001 g0035 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG00642 hp1 a0001 c0001 t0001 g0185 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG00642 hp2 a0001 c0001 t0001 g0249 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG00673 hp1 a0002 c0002 t0002 g0119 EAS CHS SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG00673 hp2 a0001 c0001 t0001 g0176 EAS CHS SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG00735 hp1 a0002 c0002 t0003 g0136 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG00735 hp2 a0001 c0001 t0001 g0257 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG00738 hp1 a0001 c0001 t0001 g0258 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG00738 hp2 a0001 c0001 t0001 g0251 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG00741 hp1 a0001 c0001 t0001 g0248 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG00741 hp2 a0003 c0004 t0001 g0072 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01070 hp1 a0002 c0002 t0005 g0022 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01070 hp2 a0001 c0001 t0001 g0225 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01071 hp1 a0002 c0002 t0005 g0023 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01071 hp2 a0001 c0001 t0001 g0230 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01081 hp1 a0002 c0002 t0005 g0023 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01081 hp2 a0001 c0001 t0001 g0228 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01099 hp1 a0002 c0002 t0005 g0150 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01099 hp2 a0001 c0001 t0001 g0172 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01106 hp1 a0002 c0002 t0003 g0132 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01106 hp2 a0001 c0001 t0001 g0227 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01109 hp1 a0001 c0003 t0001 g0089 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01109 hp2 a0002 c0002 t0003 g0146 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01167 hp1 a0002 c0002 t0005 g0022 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01167 hp2 a0001 c0001 t0001 g0253 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01168 hp1 a0002 c0002 t0003 g0263 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01168 hp2 a0003 c0004 t0001 g0014 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01169 hp1 a0002 c0002 t0005 g0153 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01169 hp2 a0003 c0004 t0001 g0014 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01175 hp1 a0007 c0008 t0001 g0242 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01175 hp2 a0001 c0001 t0001 g0226 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01192 hp1 a0001 c0001 t0001 g0235 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01192 hp2 a0001 c0003 t0004 g0002 AMR PUR SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01255 hp1 a0001 c0001 t0007 g0017 AMR CLM SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01255 hp2 a0001 c0001 t0001 g0200 AMR CLM SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01261 hp1 a0001 c0003 t0001 g0092 AMR CLM SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01261 hp2 a0001 c0001 t0001 g0205 AMR CLM SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01346 hp1 a0001 c0003 t0004 g0041 AMR CLM SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01346 hp2 a0001 c0001 t0001 g0190 AMR CLM SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01361 hp1 a0001 c0001 t0001 g0191 AMR CLM SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01361 hp2 a0003 c0004 t0001 g0065 AMR CLM SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01496 hp1 a0001 c0001 t0001 g0259 AMR CLM SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01496 hp2 a0003 c0004 t0001 g0066 AMR CLM SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01515 hp1 a0001 c0001 t0001 g0179 EUR IBS SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01515 hp2 a0001 c0003 t0001 g0093 EUR IBS SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01517 hp1 a0001 c0003 t0001 g0090 EUR IBS SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01517 hp2 a0001 c0001 t0001 g0231 EUR IBS SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01891 hp1 a0003 c0004 t0001 g0077 AFR ACB SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01891 hp2 a0004 c0005 t0001 g0038 AFR ACB SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01943 hp1 a0001 c0003 t0004 g0042 AMR PEL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01943 hp2 a0001 c0001 t0007 g0017 AMR PEL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01975 hp1 a0003 c0004 t0001 g0076 AMR PEL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01975 hp2 a0001 c0001 t0001 g0009 AMR PEL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01993 hp1 a0002 c0002 t0003 g0262 AMR PEL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG01993 hp2 a0001 c0001 t0001 g0221 AMR PEL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02015 hp1 a0002 c0002 t0002 g0007 EAS KHV SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02015 hp2 a0001 c0001 t0001 g0167 EAS KHV SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02040 hp1 a0001 c0001 t0001 g0238 EAS KHV SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02040 hp2 a0001 c0003 t0001 g0088 EAS KHV SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02055 hp1 a0004 c0005 t0001 g0037 AFR ACB SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02055 hp2 a0001 c0003 t0004 g0040 AFR ACB SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02080 hp1 a0002 c0002 t0002 g0114 EAS KHV SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02080 hp2 a0001 c0001 t0001 g0215 EAS KHV SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02083 hp1 a0002 c0002 t0002 g0135 EAS KHV SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02083 hp2 a0001 c0001 t0001 g0026 EAS KHV SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02132 hp1 a0001 c0001 t0001 g0236 EAS KHV SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02132 hp2 a0002 c0002 t0002 g0118 EAS KHV SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02145 hp1 a0001 c0003 t0004 g0058 AFR ACB SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02145 hp2 a0002 c0002 t0005 g0154 AFR ACB SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02148 hp1 a0001 c0001 t0001 g0194 AMR PEL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02148 hp2 a0001 c0003 t0004 g0054 AMR PEL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02155 hp1 a0002 c0002 t0002 g0007 EAS CDX SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02155 hp2 a0001 c0001 t0001 g0162 EAS CDX SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02257 hp1 a0001 c0001 t0001 g0173 AFR ACB SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02257 hp2 a0004 c0005 t0001 g0031 AFR ACB SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02258 hp1 a0001 c0003 t0006 g0004 AFR ACB SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02258 hp2 a0002 c0002 t0005 g0155 AFR ACB SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02280 hp1 a0002 c0002 t0005 g0024 AFR ACB SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02280 hp2 a0001 c0001 t0001 g0160 AFR ACB SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02293 hp1 a0001 c0001 t0007 g0127 AMR PEL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02293 hp2 a0001 c0003 t0004 g0043 AMR PEL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02300 hp1 a0002 c0002 t0003 g0020 AMR PEL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02300 hp2 a0001 c0001 t0001 g0156 AMR PEL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02451 hp1 a0002 c0002 t0003 g0109 AFR ACB SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02451 hp2 a0004 c0005 t0001 g0034 AFR ACB SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02572 hp1 a0002 c0002 t0005 g0151 AFR GWD SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02572 hp2 a0001 c0003 t0004 g0059 AFR GWD SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02622 hp1 a0001 c0003 t0004 g0057 AFR GWD SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02622 hp2 a0004 c0005 t0001 g0032 AFR GWD SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02630 hp1 a0002 c0002 t0006 g0084 AFR GWD SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02630 hp2 a0001 c0003 t0006 g0027 AFR GWD SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02647 hp1 a0004 c0005 t0001 g0012 AFR GWD SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02647 hp2 a0001 c0001 t0001 g0161 AFR GWD SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02698 hp1 a0003 c0004 t0001 g0069 SAS PJL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02698 hp2 a0001 c0001 t0001 g0246 SAS PJL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02717 hp1 a0001 c0001 t0001 g0186 AFR GWD SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02717 hp2 a0001 c0003 t0004 g0056 AFR GWD SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02723 hp1 a0004 c0005 t0001 g0011 AFR GWD SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02723 hp2 a0001 c0006 t0014 g0061 AFR GWD SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02735 hp1 a0001 c0001 t0001 g0026 SAS PJL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02735 hp2 a0002 c0002 t0003 g0139 SAS PJL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02738 hp1 a0002 c0002 t0003 g0140 SAS PJL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02738 hp2 a0001 c0001 t0001 g0233 SAS PJL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02809 hp1 a0001 c0003 t0003 g0105 AFR GWD SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02809 hp2 a0001 c0006 t0008 g0016 AFR GWD SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02818 hp1 a0004 c0005 t0001 g0010 AFR GWD SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02818 hp2 a0003 c0004 t0006 g0068 AFR GWD SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02886 hp1 a0001 c0001 t0001 g0163 AFR GWD SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02886 hp2 a0002 c0002 t0003 g0108 AFR GWD SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02895 hp1 a0001 c0003 t0006 g0028 AFR GWD SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02895 hp2 a0003 c0004 t0001 g0015 AFR GWD SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02897 hp1 a0001 c0001 t0001 g0170 AFR GWD SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02897 hp2 a0003 c0004 t0001 g0015 AFR GWD SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02922 hp1 a0004 c0005 t0001 g0005 AFR ESN SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02922 hp2 a0001 c0003 t0001 g0075 AFR ESN SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02965 hp1 a0003 c0004 t0001 g0080 AFR ESN SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02965 hp2 a0001 c0003 t0006 g0004 AFR ESN SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02970 hp1 a0003 c0004 t0001 g0081 AFR ESN SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02970 hp2 a0001 c0001 t0001 g0159 AFR ESN SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02976 hp1 a0004 c0005 t0001 g0036 AFR ESN SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02976 hp2 a0002 c0002 t0003 g0143 AFR ESN SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03017 hp1 a0001 c0001 t0001 g0175 SAS PJL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03017 hp2 a0001 c0003 t0001 g0091 SAS PJL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03041 hp1 a0002 c0002 t0005 g0024 AFR GWD SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03041 hp2 a0004 c0005 t0001 g0033 AFR GWD SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03130 hp1 a0001 c0006 t0008 g0087 AFR ESN SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03130 hp2 a0001 c0001 t0001 g0060 AFR ESN SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03139 hp1 a0002 c0002 t0003 g0104 AFR ESN SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03139 hp2 a0001 c0001 t0001 g0254 AFR ESN SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03195 hp1 a0004 c0005 t0001 g0005 AFR ESN SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03195 hp2 a0001 c0003 t0003 g0102 AFR ESN SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03209 hp1 a0003 c0004 t0001 g0073 AFR MSL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03209 hp2 a0004 c0005 t0001 g0010 AFR MSL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03225 hp1 a0001 c0003 t0006 g0004 AFR MSL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03225 hp2 a0004 c0005 t0001 g0012 AFR MSL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03453 hp1 a0001 c0001 t0013 g0165 AFR MSL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03453 hp2 a0001 c0001 t0001 g0188 AFR MSL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03486 hp1 a0004 c0005 t0001 g0011 AFR MSL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03486 hp2 a0002 c0002 t0003 g0107 AFR MSL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03491 hp1 a0002 c0002 t0012 g0082 SAS PJL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03491 hp2 a0001 c0001 t0001 g0195 SAS PJL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03492 hp1 a0002 c0002 t0003 g0096 SAS PJL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03492 hp2 a0001 c0001 t0001 g0196 SAS PJL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03516 hp1 a0002 c0002 t0006 g0062 AFR ESN SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03516 hp2 a0003 c0004 t0001 g0078 AFR ESN SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03540 hp1 a0003 c0004 t0001 g0079 AFR GWD SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03540 hp2 a0001 c0001 t0001 g0171 AFR GWD SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03579 hp1 a0001 c0001 t0001 g0187 AFR MSL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03579 hp2 a0002 c0002 t0003 g0103 AFR MSL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03669 hp1 a0005 c0009 t0012 g0083 SAS PJL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03669 hp2 a0001 c0001 t0001 g0237 SAS PJL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03710 hp1 a0001 c0001 t0001 g0009 SAS PJL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03710 hp2 a0002 c0002 t0003 g0149 SAS PJL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03834 hp1 a0001 c0003 t0004 g0045 SAS BEB SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03834 hp2 a0001 c0001 t0001 g0224 SAS BEB SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG04115 hp1 a0001 c0001 t0001 g0243 SAS STU SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG04115 hp2 a0002 c0002 t0003 g0098 SAS STU SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG04184 hp1 a0003 c0004 t0001 g0074 SAS BEB SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG04184 hp2 a0001 c0001 t0001 g0244 SAS BEB SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG04199 hp1 a0003 c0004 t0001 g0064 SAS STU SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG04199 hp2 a0002 c0002 t0002 g0125 SAS STU SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG04204 hp1 a0002 c0002 t0002 g0112 SAS STU SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG04204 hp2 a0001 c0001 t0001 g0193 SAS STU SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG04228 hp1 a0002 c0002 t0003 g0097 SAS STU SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG04228 hp2 a0001 c0001 t0001 g0232 SAS STU SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18522 hp1 a0001 c0001 t0001 g0169 AFR YRI SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18522 hp2 a0004 c0005 t0001 g0005 AFR YRI SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18612 hp1 a0001 c0001 t0001 g0206 EAS CHB SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18612 hp2 a0001 c0003 t0004 g0049 EAS CHB SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18747 hp1 a0001 c0001 t0001 g0001 EAS CHB SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18747 hp2 a0002 c0002 t0002 g0099 EAS CHB SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18940 hp1 a0001 c0001 t0009 g0229 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18940 hp2 a0001 c0003 t0004 g0002 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18942 hp1 a0001 c0003 t0004 g0053 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18942 hp2 a0001 c0001 t0001 g0207 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18944 hp1 a0002 c0002 t0002 g0116 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18944 hp2 a0001 c0001 t0001 g0184 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18945 hp1 a0001 c0003 t0009 g0013 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18945 hp2 a0001 c0001 t0001 g0003 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18946 hp1 a0001 c0001 t0001 g0222 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18946 hp2 a0002 c0002 t0002 g0123 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18948 hp1 a0002 c0002 t0002 g0019 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18948 hp2 a0001 c0001 t0001 g0182 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18950 hp1 a0002 c0002 t0002 g0006 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18950 hp2 a0001 c0001 t0001 g0245 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18951 hp1 a0001 c0001 t0001 g0202 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18951 hp2 a0002 c0002 t0002 g0134 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18952 hp1 a0002 c0002 t0010 g0147 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18952 hp2 a0001 c0001 t0001 g0265 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18954 hp1 a0001 c0001 t0001 g0220 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18954 hp2 a0002 c0002 t0007 g0100 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18957 hp1 a0002 c0002 t0002 g0007 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18957 hp2 a0001 c0001 t0001 g0001 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18961 hp1 a0002 c0002 t0002 g0145 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18961 hp2 a0001 c0001 t0001 g0001 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18962 hp1 a0002 c0002 t0007 g0130 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18962 hp2 a0001 c0001 t0001 g0201 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18965 hp1 a0002 c0002 t0002 g0144 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18965 hp2 a0001 c0001 t0001 g0181 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18967 hp1 a0001 c0001 t0001 g0157 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18967 hp2 a0002 c0002 t0002 g0117 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18968 hp1 a0001 c0003 t0004 g0052 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18968 hp2 a0001 c0001 t0001 g0003 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18969 hp1 a0001 c0001 t0001 g0241 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18969 hp2 a0001 c0001 t0001 g0239 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18971 hp1 a0001 c0001 t0001 g0204 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18971 hp2 a0001 c0001 t0001 g0240 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18975 hp1 a0001 c0001 t0001 g0269 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18975 hp2 a0001 c0001 t0001 g0180 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18979 hp1 a0001 c0001 t0001 g0001 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18979 hp2 a0002 c0002 t0002 g0115 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18980 hp1 a0002 c0002 t0003 g0141 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18980 hp2 a0001 c0001 t0001 g0198 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18983 hp1 a0002 c0002 t0002 g0126 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18983 hp2 a0001 c0001 t0001 g0216 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18986 hp1 a0001 c0001 t0001 g0003 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18986 hp2 a0002 c0002 t0007 g0129 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18987 hp1 a0002 c0002 t0002 g0006 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18987 hp2 a0001 c0001 t0001 g0166 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18988 hp1 a0001 c0001 t0001 g0183 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18988 hp2 a0001 c0003 t0011 g0260 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18989 hp1 a0001 c0001 t0001 g0223 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18989 hp2 a0001 c0003 t0004 g0002 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18990 hp1 a0002 c0002 t0002 g0006 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18990 hp2 a0001 c0001 t0001 g0208 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18992 hp1 a0002 c0002 t0002 g0018 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18992 hp2 a0001 c0001 t0001 g0252 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18994 hp1 a0002 c0002 t0003 g0142 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18994 hp2 a0001 c0001 t0001 g0219 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19004 hp1 a0001 c0001 t0001 g0209 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19004 hp2 a0001 c0003 t0009 g0013 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19007 hp1 a0001 c0001 t0001 g0003 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19007 hp2 a0001 c0001 t0001 g0217 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19012 hp1 a0002 c0002 t0002 g0120 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19012 hp2 a0001 c0001 t0001 g0197 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19030 hp1 a0002 c0002 t0005 g0152 AFR LWK SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19030 hp2 a0001 c0001 t0001 g0168 AFR LWK SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19043 hp1 a0001 c0006 t0008 g0086 AFR LWK SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19043 hp2 a0001 c0003 t0004 g0055 AFR LWK SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19054 hp1 a0001 c0003 t0004 g0047 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19054 hp2 a0001 c0001 t0001 g0203 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19056 hp1 a0001 c0001 t0001 g0001 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19056 hp2 a0002 c0002 t0007 g0131 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19057 hp1 a0001 c0001 t0001 g0158 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19057 hp2 a0001 c0003 t0004 g0050 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19058 hp1 a0001 c0001 t0001 g0211 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19058 hp2 a0001 c0003 t0004 g0051 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19063 hp1 a0001 c0003 t0011 g0261 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19063 hp2 a0001 c0001 t0001 g0025 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19065 hp1 a0001 c0001 t0001 g0268 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19065 hp2 a0001 c0001 t0001 g0214 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19066 hp1 a0001 c0001 t0001 g0008 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19066 hp2 a0001 c0001 t0001 g0266 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19068 hp1 a0001 c0001 t0001 g0008 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19068 hp2 a0001 c0001 t0001 g0164 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19072 hp1 a0001 c0001 t0001 g0213 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19072 hp2 a0002 c0002 t0010 g0148 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19074 hp1 a0002 c0002 t0002 g0019 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19074 hp2 a0002 c0002 t0002 g0111 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19075 hp1 a0002 c0002 t0002 g0094 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19075 hp2 a0001 c0001 t0001 g0178 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19077 hp1 a0002 c0002 t0003 g0021 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19077 hp2 a0001 c0001 t0001 g0212 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19079 hp1 a0002 c0002 t0002 g0121 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19079 hp2 a0001 c0001 t0001 g0008 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19083 hp1 a0001 c0001 t0001 g0218 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19083 hp2 a0002 c0002 t0002 g0124 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19084 hp1 a0002 c0002 t0002 g0122 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19084 hp2 a0001 c0001 t0001 g0001 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19089 hp1 a0001 c0001 t0001 g0025 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19089 hp2 a0001 c0003 t0004 g0046 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19090 hp1 a0002 c0002 t0003 g0137 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19090 hp2 a0001 c0001 t0001 g0001 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19091 hp1 a0002 c0002 t0002 g0018 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19091 hp2 a0001 c0001 t0001 g0234 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19240 hp1 a0004 c0005 t0001 g0039 AFR YRI SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA19240 hp2 a0001 c0006 t0008 g0016 AFR YRI SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA20805 hp1 a0003 c0004 t0001 g0071 EUR TSI SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA20805 hp2 a0001 c0001 t0001 g0009 EUR TSI SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02109 hp1 a0002 c0002 t0007 g0106 AFR ACB SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02109 hp2 a0001 c0001 t0001 g0210 AFR ACB SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02486 hp1 a0004 c0005 t0001 g0030 AFR ACB SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG02486 hp2 a0001 c0001 t0001 g0189 AFR ACB SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03471 hp1 a0002 c0002 t0006 g0063 AFR MSL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG03471 hp2 a0001 c0001 t0007 g0095 AFR MSL SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG06807 hp1 a0003 c0004 t0001 g0067 AFR USA SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
HG06807 hp2 a0004 c0005 t0001 g0029 AFR USA SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18955 hp1 a0002 c0002 t0002 g0101 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA18955 hp2 a0001 c0001 t0001 g0177 EAS JPT SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA20300 hp1 a0001 c0001 t0001 g0174 AFR USA SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA20300 hp2 a0001 c0003 t0003 g0110 AFR USA SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA21309 hp1 a0003 c0004 t0001 g0070 AFR LWK SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
NA21309 hp2 a0002 c0002 t0003 g0020 AFR LWK SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
homoSapiens_chm13v2 hp1 a0001 c0001 t0001 g0256 REF REF SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379
homoSapiens_grch38 hp1 a0001 c0001 t0001 g0255 REF REF SPATA1_chr1_84501386_84572379 SPATA1 chr1 84501386 84572379

chr:pos ref alt #
# of ahapid:amino-acid(protein) level
 ahapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr1:84506416 G
G
 T
T
 2 a0001
a0002
a0001
a0002
 77 HG00280.hp1
HG00408.hp1
HG00438.hp1
others(74): Show 
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00609.hp1
HG00621.hp2
HG00673.hp1
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01168.hp1
HG01255.hp1
HG01943.hp2
HG01993.hp1
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02155.hp1
HG02293.hp1
HG02300.hp1
HG02451.hp1
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03195.hp2
HG03471.hp2
HG03486.hp2
HG03492.hp1
HG03579.hp2
HG03710.hp2
HG04115.hp2
HG04199.hp2
HG04204.hp1
HG04228.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18988.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19012.hp1
NA19056.hp2
NA19063.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19090.hp1
NA19091.hp1
NA20300.hp2
NA21309.hp2
 splice_region_variant LOW c.-140G>T
c.-140G>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/14 chr1 84506416
chr1:84525893 A
A
 C
C
 1 a0005
a0005
 1 HG03669.hp1
HG03669.hp1
 missense_variant MODERATE c.364A>C
c.364A>C
 p.Asn122His
p.Asn122His
 SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/14 534/2983 364/1323 122/440 chr1 84525893
chr1:84525986 G
G
 C
C
 3 a0003
a0004
a0006
a0003
a0004
a0006
 41 HG00639.hp2
HG00741.hp2
HG01168.hp2
others(38): Show 
HG00639.hp2
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01975.hp1
HG02055.hp1
HG02257.hp2
HG02451.hp2
HG02486.hp1
HG02622.hp2
HG02647.hp1
HG02698.hp1
HG02723.hp1
HG02818.hp1
HG02818.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02965.hp1
HG02970.hp1
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03486.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA19240.hp1
NA20805.hp1
NA21309.hp1
 missense_variant MODERATE c.457G>C
c.457G>C
 p.Val153Leu
p.Val153Leu
 SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/14 627/2983 457/1323 153/440 chr1 84525986
chr1:84544211 A
A
 G
G
 3 a0002
a0005
a0006
a0002
a0005
a0006
 86 HG00280.hp1
HG00408.hp1
HG00438.hp1
others(83): Show 
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00609.hp1
HG00621.hp2
HG00639.hp2
HG00673.hp1
HG00735.hp1
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01169.hp1
HG01993.hp1
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02145.hp2
HG02155.hp1
HG02258.hp2
HG02280.hp1
HG02300.hp1
HG02451.hp1
HG02572.hp1
HG02630.hp1
HG02735.hp2
HG02738.hp1
HG02886.hp2
HG02976.hp2
HG03041.hp1
HG03139.hp1
HG03471.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG04115.hp2
HG04199.hp2
HG04204.hp1
HG04228.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19012.hp1
NA19030.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19090.hp1
NA19091.hp1
NA21309.hp2
 missense_variant MODERATE c.727A>G
c.727A>G
 p.Lys243Glu
p.Lys243Glu
 SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 9/14 897/2983 727/1323 243/440 chr1 84544211
chr1:84548864 G
G
 A
A
 1 a0007
a0007
 1 HG01175.hp1
HG01175.hp1
 missense_variant MODERATE c.1025G>A
c.1025G>A
 p.Arg342Gln
p.Arg342Gln
 SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 11/14 1195/2983 1025/1323 342/440 chr1 84548864
chr1:84555919 G
G
 A
A
 1 a0004
a0004
 19 HG01891.hp2
HG02055.hp1
HG02257.hp2
others(16): Show 
HG01891.hp2
HG02055.hp1
HG02257.hp2
HG02451.hp2
HG02486.hp1
HG02622.hp2
HG02647.hp1
HG02723.hp1
HG02818.hp1
HG02922.hp1
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp2
HG03225.hp2
HG03486.hp1
HG06807.hp2
NA18522.hp2
NA19240.hp1
 missense_variant MODERATE c.1234G>A
c.1234G>A
 p.Val412Met
p.Val412Met
 SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/14 1404/2983 1234/1323 412/440 chr1 84555919

chr:pos ref alt #
# of chapid
 chapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr1:84532954 T
T
 C
C
 1 a0001c0006
a0001c0006
 5 HG02723.hp2
HG02809.hp2
HG03130.hp1
others(2): Show 
HG02723.hp2
HG02809.hp2
HG03130.hp1
NA19043.hp1
NA19240.hp2
 synonymous_variant LOW c.639T>C
c.639T>C
 p.Asp213Asp
p.Asp213Asp
 SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 7/14 809/2983 639/1323 213/440 chr1 84532954
chr1:84550494 A
A
 G
G
 7 a0001c0003
a0001c0006
a0002c0002
others(4): Show 
a0001c0003
a0001c0006
a0002c0002
a0003c0004
a0004c0005
a0005c0009
a0006c0007
 175 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(172): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01192.hp2
HG01261.hp1
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01515.hp2
HG01517.hp1
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG01993.hp1
HG02015.hp1
HG02040.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp2
HG02155.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp2
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04184.hp1
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18944.hp1
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18968.hp1
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18988.hp2
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19004.hp2
NA19012.hp1
NA19030.hp1
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19056.hp2
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19090.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
NA20805.hp1
NA21309.hp1
NA21309.hp2
 synonymous_variant LOW c.1188A>G
c.1188A>G
 p.Leu396Leu
p.Leu396Leu
 SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/14 1358/2983 1188/1323 396/440 chr1 84550494

chr:pos ref alt #
# of thapid:transcript level
 thapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid transcript_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr1:84506406 C
C
 G
G
 2 a0002c0002t0012
a0005c0009t0012
a0002c0002t0012
a0005c0009t0012
 2 HG03491.hp1
HG03669.hp1
HG03491.hp1
HG03669.hp1
 5_prime_UTR_variant MODIFIER c.-150C>G
c.-150C>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/14 9954 chr1 84506406
chr1:84516255 C
C
 CA
CA
 3 a0001c0001t0009
a0001c0003t0004
a0001c0003t0009
a0001c0001t0009
a0001c0003t0004
a0001c0003t0009
 28 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(25): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG01192.hp2
HG01346.hp1
HG01943.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02293.hp2
HG02572.hp2
HG02622.hp1
HG02717.hp2
HG03834.hp1
NA18612.hp2
NA18940.hp1
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19089.hp2
 5_prime_UTR_variant MODIFIER c.-97dupA
c.-97dupA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/14 96 INFO_REALIGN_3_PRIME chr1 84516255
chr1:84565947 G
G
 A
A
 10 a0001c0003t0003
a0001c0003t0004
a0001c0003t0006
others(7): Show 
a0001c0003t0003
a0001c0003t0004
a0001c0003t0006
a0002c0002t0002
a0002c0002t0003
a0002c0002t0005
a0002c0002t0006
a0002c0002t0012
a0003c0004t0006
a0005c0009t0012
 112 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(109): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00673.hp1
HG00735.hp1
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01169.hp1
HG01192.hp2
HG01346.hp1
HG01943.hp1
HG01993.hp1
HG02015.hp1
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp2
HG02155.hp1
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02630.hp1
HG02630.hp2
HG02717.hp2
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02965.hp2
HG02976.hp2
HG03041.hp1
HG03139.hp1
HG03195.hp2
HG03225.hp1
HG03471.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04199.hp2
HG04204.hp1
HG04228.hp1
NA18612.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18965.hp1
NA18967.hp2
NA18968.hp1
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18987.hp1
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19012.hp1
NA19030.hp1
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19090.hp1
NA19091.hp1
NA20300.hp2
NA21309.hp2
 3_prime_UTR_variant MODIFIER c.*58G>A
c.*58G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 14/14 58 chr1 84565947
chr1:84566140 T
T
 C
C
 1 a0001c0006t0008
a0001c0006t0008
 4 HG02809.hp2
HG03130.hp1
NA19043.hp1
others(1): Show 
HG02809.hp2
HG03130.hp1
NA19043.hp1
NA19240.hp2
 3_prime_UTR_variant MODIFIER c.*251T>C
c.*251T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 14/14 251 chr1 84566140
chr1:84566260 T
T
 C
C
 1 a0002c0002t0002
a0002c0002t0002
 34 HG00438.hp1
HG00544.hp1
HG00673.hp1
others(31): Show 
HG00438.hp1
HG00544.hp1
HG00673.hp1
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02132.hp2
HG02155.hp1
HG04199.hp2
HG04204.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18983.hp1
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA19012.hp1
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19091.hp1
 3_prime_UTR_variant MODIFIER c.*371T>C
c.*371T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 14/14 371 chr1 84566260
chr1:84566386 G
G
 T
T
 2 a0001c0006t0014
a0002c0002t0005
a0001c0006t0014
a0002c0002t0005
 13 HG01070.hp1
HG01071.hp1
HG01081.hp1
others(10): Show 
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01167.hp1
HG01169.hp1
HG02145.hp2
HG02258.hp2
HG02280.hp1
HG02572.hp1
HG02723.hp2
HG03041.hp1
NA19030.hp1
 3_prime_UTR_variant MODIFIER c.*497G>T
c.*497G>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 14/14 497 chr1 84566386
chr1:84566545 T
T
 G
G
 1 a0002c0002t0005
a0002c0002t0005
 12 HG01070.hp1
HG01071.hp1
HG01081.hp1
others(9): Show 
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01167.hp1
HG01169.hp1
HG02145.hp2
HG02258.hp2
HG02280.hp1
HG02572.hp1
HG03041.hp1
NA19030.hp1
 3_prime_UTR_variant MODIFIER c.*656T>G
c.*656T>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 14/14 656 chr1 84566545
chr1:84566693 C
C
 T
T
 1 a0001c0001t0013
a0001c0001t0013
 1 HG03453.hp1
HG03453.hp1
 3_prime_UTR_variant MODIFIER c.*804C>T
c.*804C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 14/14 804 chr1 84566693
chr1:84566752 C
C
 T
T
 2 a0001c0006t0008
a0001c0006t0014
a0001c0006t0008
a0001c0006t0014
 5 HG02723.hp2
HG02809.hp2
HG03130.hp1
others(2): Show 
HG02723.hp2
HG02809.hp2
HG03130.hp1
NA19043.hp1
NA19240.hp2
 3_prime_UTR_variant MODIFIER c.*863C>T
c.*863C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 14/14 863 chr1 84566752
chr1:84566887 A
A
 G
G
 1 a0001c0003t0011
a0001c0003t0011
 2 NA18988.hp2
NA19063.hp1
NA18988.hp2
NA19063.hp1
 3_prime_UTR_variant MODIFIER c.*998A>G
c.*998A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 14/14 998 chr1 84566887
chr1:84566888 G
G
 C
C
 1 a0002c0002t0010
a0002c0002t0010
 2 NA18952.hp1
NA19072.hp2
NA18952.hp1
NA19072.hp2
 3_prime_UTR_variant MODIFIER c.*999G>C
c.*999G>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 14/14 999 chr1 84566888
chr1:84566909 C
C
 T
T
 2 a0001c0006t0008
a0001c0006t0014
a0001c0006t0008
a0001c0006t0014
 5 HG02723.hp2
HG02809.hp2
HG03130.hp1
others(2): Show 
HG02723.hp2
HG02809.hp2
HG03130.hp1
NA19043.hp1
NA19240.hp2
 3_prime_UTR_variant MODIFIER c.*1020C>T
c.*1020C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 14/14 1020 chr1 84566909

chr:pos ref alt #
# of ghapid:genebody level
 ghapids #
# of haplotypeids
 haplotypeids annotation impact hgvs_c hgvs_p genename geneid featuretype featureid genebody_biotype rank cdna
cdna pos length
 cds
cds pos length
 aa
aa pos length
 distance status chr pos
chr1:84506594 G
G
 C
C
 67 a0001c0001t0001g0060
a0001c0003t0001g0075
a0001c0003t0004g0002
others(64): Show 
a0001c0001t0001g0060
a0001c0003t0001g0075
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0006t0014g0061
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 81 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(78): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG00639.hp2
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG02055.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02258.hp1
HG02293.hp2
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03041.hp2
HG03130.hp2
HG03195.hp1
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03669.hp1
HG03834.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19089.hp2
NA19240.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.-138+176G>C
c.-138+176G>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84506594
chr1:84506617 A
A
 C
C
 1 a0002c0002t0006g0084
a0002c0002t0006g0084
 1 HG02630.hp1
HG02630.hp1
 intron_variant MODIFIER c.-138+199A>C
c.-138+199A>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84506617
chr1:84506653 C
C
 T
T
 2 a0002c0002t0012g0082
a0005c0009t0012g0083
a0002c0002t0012g0082
a0005c0009t0012g0083
 2 HG03491.hp1
HG03669.hp1
HG03491.hp1
HG03669.hp1
 intron_variant MODIFIER c.-138+235C>T
c.-138+235C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84506653
chr1:84506658 G
G
 T
T
 4 a0001c0001t0001g0266
a0001c0001t0001g0267
a0001c0001t0001g0268
others(1): Show 
a0001c0001t0001g0266
a0001c0001t0001g0267
a0001c0001t0001g0268
a0001c0001t0001g0269
 4 HG00609.hp2
NA18975.hp1
NA19065.hp1
others(1): Show 
HG00609.hp2
NA18975.hp1
NA19065.hp1
NA19066.hp2
 intron_variant MODIFIER c.-138+240G>T
c.-138+240G>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84506658
chr1:84506756 G
G
 A
A
 1 a0002c0002t0002g0085
a0002c0002t0002g0085
 1 HG00438.hp1
HG00438.hp1
 intron_variant MODIFIER c.-138+338G>A
c.-138+338G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84506756
chr1:84506782 C
C
 A
A
 9 a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
others(6): Show 
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
 10 HG01109.hp1
HG01261.hp1
HG01515.hp2
others(7): Show 
HG01109.hp1
HG01261.hp1
HG01515.hp2
HG01517.hp1
HG02040.hp2
HG02809.hp2
HG03017.hp2
HG03130.hp1
NA19043.hp1
NA19240.hp2
 intron_variant MODIFIER c.-138+364C>A
c.-138+364C>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84506782
chr1:84507134 C
C
 T
T
 67 a0001c0001t0001g0060
a0001c0003t0001g0075
a0001c0003t0004g0002
others(64): Show 
a0001c0001t0001g0060
a0001c0003t0001g0075
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0006t0014g0061
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 81 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(78): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG00639.hp2
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG02055.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02258.hp1
HG02293.hp2
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03041.hp2
HG03130.hp2
HG03195.hp1
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03669.hp1
HG03834.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19089.hp2
NA19240.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.-138+716C>T
c.-138+716C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84507134
chr1:84507169 A
A
 G
G
 2 a0003c0004t0001g0015
a0003c0004t0001g0081
a0003c0004t0001g0015
a0003c0004t0001g0081
 3 HG02895.hp2
HG02897.hp2
HG02970.hp1
HG02895.hp2
HG02897.hp2
HG02970.hp1
 intron_variant MODIFIER c.-138+751A>G
c.-138+751A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84507169
chr1:84507199 A
A
 G
G
 2 a0001c0001t0001g0264
a0001c0001t0001g0265
a0001c0001t0001g0264
a0001c0001t0001g0265
 2 HG00438.hp2
NA18952.hp2
HG00438.hp2
NA18952.hp2
 intron_variant MODIFIER c.-138+781A>G
c.-138+781A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84507199
chr1:84507428 C
C
 T
T
 20 a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
others(17): Show 
a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
 22 HG00741.hp2
HG01168.hp2
HG01169.hp2
others(19): Show 
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02698.hp1
HG02818.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.-138+1010C>T
c.-138+1010C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84507428
chr1:84507522 G
G
 A
A
 64 a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
others(61): Show 
a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 73 HG00280.hp1
HG00408.hp1
HG00438.hp1
others(70): Show 
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00609.hp1
HG00621.hp2
HG00673.hp1
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01255.hp1
HG01943.hp2
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02155.hp1
HG02293.hp1
HG02300.hp1
HG02451.hp1
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03195.hp2
HG03471.hp2
HG03486.hp2
HG03492.hp1
HG03579.hp2
HG03710.hp2
HG04115.hp2
HG04199.hp2
HG04204.hp1
HG04228.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19012.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19090.hp1
NA19091.hp1
NA20300.hp2
NA21309.hp2
 intron_variant MODIFIER c.-138+1104G>A
c.-138+1104G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84507522
chr1:84507573 T
T
 C
C
 3 a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
 4 HG02809.hp2
HG03130.hp1
NA19043.hp1
others(1): Show 
HG02809.hp2
HG03130.hp1
NA19043.hp1
NA19240.hp2
 intron_variant MODIFIER c.-138+1155T>C
c.-138+1155T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84507573
chr1:84507592 G
G
 T
T
 71 a0001c0001t0001g0060
a0001c0003t0001g0075
a0001c0003t0004g0002
others(68): Show 
a0001c0001t0001g0060
a0001c0003t0001g0075
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0014g0061
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 85 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(82): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG00639.hp2
HG00741.hp2
HG01168.hp1
HG01168.hp2
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG01993.hp1
HG02055.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02258.hp1
HG02293.hp2
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03041.hp2
HG03130.hp2
HG03195.hp1
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03669.hp1
HG03834.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18988.hp2
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19089.hp2
NA19240.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.-138+1174G>T
c.-138+1174G>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84507592
chr1:84507751 T
T
 A
A
 153 a0001c0001t0001g0060
a0001c0001t0007g0017
a0001c0001t0007g0095
others(150): Show 
a0001c0001t0001g0060
a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
a0001c0003t0001g0075
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 180 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(177): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01192.hp2
HG01255.hp1
HG01261.hp1
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01515.hp2
HG01517.hp1
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01943.hp2
HG01975.hp1
HG01993.hp1
HG02015.hp1
HG02040.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp2
HG02155.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02293.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp2
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04184.hp1
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18944.hp1
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18968.hp1
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18988.hp2
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19004.hp2
NA19012.hp1
NA19030.hp1
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19056.hp2
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19090.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
NA20805.hp1
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.-138+1333T>A
c.-138+1333T>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84507751
chr1:84507788 T
T
 A
A
 1 a0001c0001t0001g0156
a0001c0001t0001g0156
 1 HG02300.hp2
HG02300.hp2
 intron_variant MODIFIER c.-138+1370T>A
c.-138+1370T>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84507788
chr1:84507790 C
C
 T
T
 1 a0002c0002t0003g0149
a0002c0002t0003g0149
 1 HG03710.hp2
HG03710.hp2
 intron_variant MODIFIER c.-138+1372C>T
c.-138+1372C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84507790
chr1:84507855 G
G
 GA
GA
 188 a0001c0001t0001g0001
a0001c0001t0001g0060
a0001c0001t0001g0158
others(185): Show 
a0001c0001t0001g0001
a0001c0001t0001g0060
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0163
a0001c0001t0001g0164
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0170
a0001c0001t0001g0171
a0001c0001t0001g0172
a0001c0001t0001g0173
a0001c0001t0001g0174
a0001c0001t0001g0175
a0001c0001t0001g0176
a0001c0001t0001g0177
a0001c0001t0001g0178
a0001c0001t0001g0179
a0001c0001t0001g0180
a0001c0001t0001g0181
a0001c0001t0001g0182
a0001c0001t0001g0183
a0001c0001t0001g0184
a0001c0001t0001g0185
a0001c0001t0001g0186
a0001c0001t0001g0187
a0001c0001t0001g0188
a0001c0001t0001g0189
a0001c0001t0001g0190
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0204
a0001c0001t0001g0205
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0213
a0001c0001t0001g0214
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0001g0219
a0001c0001t0001g0220
a0001c0001t0001g0221
a0001c0001t0001g0222
a0001c0001t0001g0223
a0001c0001t0001g0224
a0001c0001t0001g0225
a0001c0001t0001g0226
a0001c0001t0001g0227
a0001c0001t0001g0228
a0001c0001t0001g0266
a0001c0001t0001g0267
a0001c0001t0001g0268
a0001c0001t0001g0269
a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
a0001c0001t0013g0165
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 213 HG00140.hp1
HG00140.hp2
HG00280.hp1
others(210): Show 
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00408.hp1
HG00408.hp2
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00609.hp2
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00642.hp1
HG00673.hp1
HG00673.hp2
HG00735.hp1
HG01070.hp1
HG01070.hp2
HG01071.hp1
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01099.hp2
HG01106.hp1
HG01106.hp2
HG01109.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01169.hp1
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01261.hp1
HG01261.hp2
HG01346.hp1
HG01346.hp2
HG01361.hp1
HG01515.hp1
HG01517.hp1
HG01943.hp1
HG01943.hp2
HG01993.hp1
HG01993.hp2
HG02015.hp1
HG02015.hp2
HG02040.hp2
HG02055.hp2
HG02080.hp1
HG02080.hp2
HG02083.hp1
HG02109.hp1
HG02109.hp2
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02148.hp2
HG02155.hp1
HG02155.hp2
HG02257.hp1
HG02258.hp2
HG02280.hp1
HG02280.hp2
HG02293.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02486.hp2
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02630.hp1
HG02647.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp2
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02886.hp1
HG02886.hp2
HG02897.hp1
HG02970.hp2
HG02976.hp2
HG03017.hp1
HG03017.hp2
HG03041.hp1
HG03130.hp1
HG03130.hp2
HG03139.hp1
HG03195.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp2
HG03491.hp2
HG03492.hp1
HG03492.hp2
HG03516.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03710.hp2
HG03834.hp1
HG03834.hp2
HG04115.hp2
HG04199.hp2
HG04204.hp1
HG04204.hp2
HG04228.hp1
NA18522.hp1
NA18612.hp1
NA18612.hp2
NA18747.hp1
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18942.hp2
NA18944.hp1
NA18944.hp2
NA18945.hp1
NA18946.hp1
NA18946.hp2
NA18948.hp1
NA18948.hp2
NA18950.hp1
NA18951.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp1
NA18954.hp2
NA18955.hp1
NA18955.hp2
NA18957.hp1
NA18957.hp2
NA18961.hp1
NA18961.hp2
NA18962.hp1
NA18962.hp2
NA18965.hp1
NA18965.hp2
NA18967.hp2
NA18968.hp1
NA18971.hp1
NA18975.hp1
NA18975.hp2
NA18979.hp1
NA18979.hp2
NA18980.hp1
NA18980.hp2
NA18983.hp1
NA18983.hp2
NA18986.hp2
NA18987.hp1
NA18987.hp2
NA18988.hp1
NA18988.hp2
NA18989.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18994.hp1
NA18994.hp2
NA19004.hp1
NA19004.hp2
NA19007.hp2
NA19012.hp1
NA19012.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19054.hp2
NA19056.hp1
NA19056.hp2
NA19057.hp1
NA19057.hp2
NA19058.hp1
NA19058.hp2
NA19063.hp1
NA19065.hp1
NA19065.hp2
NA19066.hp2
NA19068.hp2
NA19072.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19075.hp2
NA19077.hp1
NA19077.hp2
NA19079.hp1
NA19083.hp1
NA19083.hp2
NA19084.hp1
NA19084.hp2
NA19089.hp2
NA19090.hp1
NA19090.hp2
NA19091.hp1
NA19240.hp2
NA20300.hp1
NA20300.hp2
NA21309.hp2
 intron_variant MODIFIER c.-138+1449dupA
c.-138+1449dupA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 INFO_REALIGN_3_PRIME chr1 84507855
chr1:84507855 G
G
 GAA
GAA
 21 a0001c0001t0001g0157
a0001c0003t0006g0004
a0001c0003t0006g0027
others(18): Show 
a0001c0001t0001g0157
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0002c0002t0012g0082
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 28 HG00639.hp2
HG01891.hp2
HG02055.hp1
others(25): Show 
HG00639.hp2
HG01891.hp2
HG02055.hp1
HG02257.hp2
HG02258.hp1
HG02451.hp2
HG02486.hp1
HG02622.hp2
HG02630.hp2
HG02647.hp1
HG02723.hp1
HG02818.hp1
HG02895.hp1
HG02922.hp1
HG02965.hp2
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03486.hp1
HG03491.hp1
HG03669.hp1
HG06807.hp2
NA18522.hp2
NA18967.hp1
NA19240.hp1
 intron_variant MODIFIER c.-138+1448_-138+144
others(6): Show 
c.-138+1448_-138+1449dupAA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 INFO_REALIGN_3_PRIME chr1 84507855
chr1:84507914 G
G
 C
C
 1 a0001c0001t0001g0158
a0001c0001t0001g0158
 1 NA19057.hp1
NA19057.hp1
 intron_variant MODIFIER c.-138+1496G>C
c.-138+1496G>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84507914
chr1:84508198 C
C
 T
T
 64 a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
others(61): Show 
a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 73 HG00280.hp1
HG00408.hp1
HG00438.hp1
others(70): Show 
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00609.hp1
HG00621.hp2
HG00673.hp1
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01255.hp1
HG01943.hp2
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02155.hp1
HG02293.hp1
HG02300.hp1
HG02451.hp1
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03195.hp2
HG03471.hp2
HG03486.hp2
HG03492.hp1
HG03579.hp2
HG03710.hp2
HG04115.hp2
HG04199.hp2
HG04204.hp1
HG04228.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19012.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19090.hp1
NA19091.hp1
NA20300.hp2
NA21309.hp2
 intron_variant MODIFIER c.-138+1780C>T
c.-138+1780C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84508198
chr1:84508203 G
G
 A
A
 64 a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
others(61): Show 
a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 73 HG00280.hp1
HG00408.hp1
HG00438.hp1
others(70): Show 
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00609.hp1
HG00621.hp2
HG00673.hp1
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01255.hp1
HG01943.hp2
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02155.hp1
HG02293.hp1
HG02300.hp1
HG02451.hp1
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03195.hp2
HG03471.hp2
HG03486.hp2
HG03492.hp1
HG03579.hp2
HG03710.hp2
HG04115.hp2
HG04199.hp2
HG04204.hp1
HG04228.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19012.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19090.hp1
NA19091.hp1
NA20300.hp2
NA21309.hp2
 intron_variant MODIFIER c.-138+1785G>A
c.-138+1785G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84508203
chr1:84508243 C
C
 A
A
 1 a0002c0002t0005g0150
a0002c0002t0005g0150
 1 HG01099.hp1
HG01099.hp1
 intron_variant MODIFIER c.-138+1825C>A
c.-138+1825C>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84508243
chr1:84508262 G
G
 A
A
 9 a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
others(6): Show 
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
 12 HG01070.hp1
HG01071.hp1
HG01081.hp1
others(9): Show 
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01167.hp1
HG01169.hp1
HG02145.hp2
HG02258.hp2
HG02280.hp1
HG02572.hp1
HG03041.hp1
NA19030.hp1
 intron_variant MODIFIER c.-138+1844G>A
c.-138+1844G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84508262
chr1:84508282 C
C
 CA
CA
 32 a0001c0001t0001g0025
a0001c0001t0001g0159
a0001c0001t0001g0160
others(29): Show 
a0001c0001t0001g0025
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0163
a0001c0001t0001g0164
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0009g0229
a0001c0001t0013g0165
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0002c0002t0002g0094
a0002c0002t0012g0082
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 40 HG00639.hp2
HG01891.hp2
HG02015.hp2
others(37): Show 
HG00639.hp2
HG01891.hp2
HG02015.hp2
HG02055.hp1
HG02155.hp2
HG02257.hp2
HG02258.hp1
HG02280.hp2
HG02451.hp2
HG02486.hp1
HG02622.hp2
HG02630.hp2
HG02647.hp1
HG02647.hp2
HG02723.hp1
HG02818.hp1
HG02886.hp1
HG02895.hp1
HG02922.hp1
HG02965.hp2
HG02970.hp2
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03453.hp1
HG03486.hp1
HG03491.hp1
HG03669.hp1
HG06807.hp2
NA18522.hp2
NA18940.hp1
NA18987.hp2
NA19063.hp2
NA19068.hp2
NA19075.hp1
NA19089.hp1
NA19240.hp1
 intron_variant MODIFIER c.-138+1877dupA
c.-138+1877dupA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 INFO_REALIGN_3_PRIME chr1 84508282
chr1:84508444 C
C
 T
T
 4 a0001c0003t0011g0260
a0001c0003t0011g0261
a0002c0002t0003g0262
others(1): Show 
a0001c0003t0011g0260
a0001c0003t0011g0261
a0002c0002t0003g0262
a0002c0002t0003g0263
 4 HG01168.hp1
HG01993.hp1
NA18988.hp2
others(1): Show 
HG01168.hp1
HG01993.hp1
NA18988.hp2
NA19063.hp1
 intron_variant MODIFIER c.-138+2026C>T
c.-138+2026C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84508444
chr1:84508466 T
T
 C
C
 67 a0001c0001t0001g0060
a0001c0003t0001g0075
a0001c0003t0004g0002
others(64): Show 
a0001c0001t0001g0060
a0001c0003t0001g0075
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0006t0014g0061
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 81 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(78): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG00639.hp2
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG02055.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02258.hp1
HG02293.hp2
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03041.hp2
HG03130.hp2
HG03195.hp1
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03669.hp1
HG03834.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19089.hp2
NA19240.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.-138+2048T>C
c.-138+2048T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84508466
chr1:84508527 A
A
 G
G
 2 a0001c0001t0001g0227
a0001c0001t0001g0228
a0001c0001t0001g0227
a0001c0001t0001g0228
 2 HG01081.hp2
HG01106.hp2
HG01081.hp2
HG01106.hp2
 intron_variant MODIFIER c.-138+2109A>G
c.-138+2109A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84508527
chr1:84508546 A
A
 G
G
 1 a0001c0001t0001g0226
a0001c0001t0001g0226
 1 HG01175.hp2
HG01175.hp2
 intron_variant MODIFIER c.-138+2128A>G
c.-138+2128A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84508546
chr1:84509208 T
T
 TA
TA
 19 a0001c0001t0001g0169
a0001c0001t0001g0170
a0001c0001t0001g0171
others(16): Show 
a0001c0001t0001g0169
a0001c0001t0001g0170
a0001c0001t0001g0171
a0001c0001t0001g0172
a0001c0001t0001g0173
a0001c0001t0001g0174
a0001c0001t0001g0175
a0001c0001t0001g0230
a0001c0001t0007g0095
a0001c0003t0011g0260
a0001c0003t0011g0261
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0150
a0002c0002t0005g0154
a0002c0002t0005g0155
 19 HG01071.hp2
HG01099.hp1
HG01099.hp2
others(16): Show 
HG01071.hp2
HG01099.hp1
HG01099.hp2
HG01168.hp1
HG01993.hp1
HG02145.hp2
HG02257.hp1
HG02258.hp2
HG02897.hp1
HG03017.hp1
HG03471.hp2
HG03492.hp1
HG03540.hp2
HG04115.hp2
HG04228.hp1
NA18522.hp1
NA18988.hp2
NA19063.hp1
NA20300.hp1
 intron_variant MODIFIER c.-138+2804dupA
c.-138+2804dupA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 INFO_REALIGN_3_PRIME chr1 84509208
chr1:84509208 T
T
 TAA
TAA
 7 a0001c0001t0001g0168
a0002c0002t0005g0022
a0002c0002t0005g0023
others(4): Show 
a0001c0001t0001g0168
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
 10 HG01070.hp1
HG01071.hp1
HG01081.hp1
others(7): Show 
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01167.hp1
HG01169.hp1
HG02280.hp1
HG02572.hp1
HG03041.hp1
NA19030.hp1
NA19030.hp2
 intron_variant MODIFIER c.-138+2803_-138+280
others(6): Show 
c.-138+2803_-138+2804dupAA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 INFO_REALIGN_3_PRIME chr1 84509208
chr1:84509277 T
T
 C
C
 82 a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
others(79): Show 
a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 95 HG00280.hp1
HG00408.hp1
HG00438.hp1
others(92): Show 
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00609.hp1
HG00621.hp2
HG00673.hp1
HG00735.hp1
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01109.hp2
HG01167.hp1
HG01169.hp1
HG01255.hp1
HG01261.hp1
HG01515.hp2
HG01517.hp1
HG01943.hp2
HG02015.hp1
HG02040.hp2
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02145.hp2
HG02155.hp1
HG02258.hp2
HG02280.hp1
HG02293.hp1
HG02300.hp1
HG02451.hp1
HG02572.hp1
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02886.hp2
HG02976.hp2
HG03017.hp2
HG03041.hp1
HG03130.hp1
HG03139.hp1
HG03195.hp2
HG03471.hp2
HG03486.hp2
HG03492.hp1
HG03579.hp2
HG03710.hp2
HG04115.hp2
HG04199.hp2
HG04204.hp1
HG04228.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19012.hp1
NA19030.hp1
NA19043.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19090.hp1
NA19091.hp1
NA19240.hp2
NA20300.hp2
NA21309.hp2
 intron_variant MODIFIER c.-138+2859T>C
c.-138+2859T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84509277
chr1:84509311 C
C
 A
A
 1 a0001c0003t0004g0040
a0001c0003t0004g0040
 1 HG02055.hp2
HG02055.hp2
 intron_variant MODIFIER c.-138+2893C>A
c.-138+2893C>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84509311
chr1:84509313 T
T
 C
C
 20 a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
others(17): Show 
a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
 22 HG00741.hp2
HG01168.hp2
HG01169.hp2
others(19): Show 
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02698.hp1
HG02818.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.-138+2895T>C
c.-138+2895T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84509313
chr1:84509402 A
A
 G
G
 64 a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
others(61): Show 
a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 73 HG00280.hp1
HG00408.hp1
HG00438.hp1
others(70): Show 
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00609.hp1
HG00621.hp2
HG00673.hp1
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01255.hp1
HG01943.hp2
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02155.hp1
HG02293.hp1
HG02300.hp1
HG02451.hp1
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03195.hp2
HG03471.hp2
HG03486.hp2
HG03492.hp1
HG03579.hp2
HG03710.hp2
HG04115.hp2
HG04199.hp2
HG04204.hp1
HG04228.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19012.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19090.hp1
NA19091.hp1
NA20300.hp2
NA21309.hp2
 intron_variant MODIFIER c.-138+2984A>G
c.-138+2984A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84509402
chr1:84509483 T
T
 G
G
 7 a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0170
others(4): Show 
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0170
a0001c0001t0001g0171
a0001c0001t0001g0172
a0001c0001t0001g0173
a0001c0001t0001g0174
 7 HG01099.hp2
HG02257.hp1
HG02897.hp1
others(4): Show 
HG01099.hp2
HG02257.hp1
HG02897.hp1
HG03540.hp2
NA18522.hp1
NA19030.hp2
NA20300.hp1
 intron_variant MODIFIER c.-138+3065T>G
c.-138+3065T>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84509483
chr1:84509704 T
T
 A
A
 27 a0001c0001t0001g0060
a0001c0003t0004g0002
a0001c0003t0004g0040
others(24): Show 
a0001c0001t0001g0060
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0009g0013
a0001c0006t0014g0061
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
 32 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(29): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG01192.hp2
HG01346.hp1
HG01943.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02293.hp2
HG02572.hp2
HG02622.hp1
HG02630.hp1
HG02717.hp2
HG02723.hp2
HG03130.hp2
HG03471.hp1
HG03516.hp1
HG03834.hp1
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19089.hp2
 intron_variant MODIFIER c.-138+3286T>A
c.-138+3286T>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84509704
chr1:84509722 C
C
 T
T
 3 a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
 3 HG02630.hp1
HG03471.hp1
HG03516.hp1
HG02630.hp1
HG03471.hp1
HG03516.hp1
 intron_variant MODIFIER c.-138+3304C>T
c.-138+3304C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84509722
chr1:84509888 A
A
 G
G
 71 a0001c0001t0001g0060
a0001c0003t0001g0075
a0001c0003t0004g0002
others(68): Show 
a0001c0001t0001g0060
a0001c0003t0001g0075
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0014g0061
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 85 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(82): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG00639.hp2
HG00741.hp2
HG01168.hp1
HG01168.hp2
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG01993.hp1
HG02055.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02258.hp1
HG02293.hp2
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03041.hp2
HG03130.hp2
HG03195.hp1
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03669.hp1
HG03834.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18988.hp2
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19089.hp2
NA19240.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.-138+3470A>G
c.-138+3470A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84509888
chr1:84509889 G
G
 T
T
 1 a0003c0004t0001g0081
a0003c0004t0001g0081
 1 HG02970.hp1
HG02970.hp1
 intron_variant MODIFIER c.-138+3471G>T
c.-138+3471G>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84509889
chr1:84509904 A
A
 G
G
 1 a0001c0001t0001g0225
a0001c0001t0001g0225
 1 HG01070.hp2
HG01070.hp2
 intron_variant MODIFIER c.-138+3486A>G
c.-138+3486A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84509904
chr1:84509925 C
C
 T
T
 2 a0004c0005t0001g0012
a0004c0005t0001g0039
a0004c0005t0001g0012
a0004c0005t0001g0039
 3 HG02647.hp1
HG03225.hp2
NA19240.hp1
HG02647.hp1
HG03225.hp2
NA19240.hp1
 intron_variant MODIFIER c.-138+3507C>T
c.-138+3507C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84509925
chr1:84509971 C
C
 T
T
 20 a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
others(17): Show 
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0002c0002t0012g0082
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 27 HG00639.hp2
HG01891.hp2
HG02055.hp1
others(24): Show 
HG00639.hp2
HG01891.hp2
HG02055.hp1
HG02257.hp2
HG02258.hp1
HG02451.hp2
HG02486.hp1
HG02622.hp2
HG02630.hp2
HG02647.hp1
HG02723.hp1
HG02818.hp1
HG02895.hp1
HG02922.hp1
HG02965.hp2
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03486.hp1
HG03491.hp1
HG03669.hp1
HG06807.hp2
NA18522.hp2
NA19240.hp1
 intron_variant MODIFIER c.-138+3553C>T
c.-138+3553C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84509971
chr1:84510328 G
G
 A
A
 135 a0001c0001t0001g0060
a0001c0001t0007g0017
a0001c0001t0007g0095
others(132): Show 
a0001c0001t0001g0060
a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 158 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(155): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01106.hp1
HG01109.hp2
HG01168.hp1
HG01168.hp2
HG01169.hp2
HG01192.hp2
HG01255.hp1
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01943.hp2
HG01975.hp1
HG01993.hp1
HG02015.hp1
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02145.hp1
HG02148.hp2
HG02155.hp1
HG02257.hp2
HG02258.hp1
HG02293.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03041.hp2
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04184.hp1
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18944.hp1
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18968.hp1
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18988.hp2
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19004.hp2
NA19012.hp1
NA19043.hp2
NA19054.hp1
NA19056.hp2
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19090.hp1
NA19091.hp1
NA19240.hp1
NA20300.hp2
NA20805.hp1
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.-138+3910G>A
c.-138+3910G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84510328
chr1:84510593 A
A
 G
G
 4 a0001c0001t0001g0256
a0001c0001t0001g0257
a0001c0001t0001g0258
others(1): Show 
a0001c0001t0001g0256
a0001c0001t0001g0257
a0001c0001t0001g0258
a0001c0001t0001g0259
 4 HG00735.hp2
HG00738.hp1
HG01496.hp1
others(1): Show 
HG00735.hp2
HG00738.hp1
HG01496.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.-138+4175A>G
c.-138+4175A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84510593
chr1:84510634 G
G
 C
C
 9 a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
others(6): Show 
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
 12 HG01070.hp1
HG01071.hp1
HG01081.hp1
others(9): Show 
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01167.hp1
HG01169.hp1
HG02145.hp2
HG02258.hp2
HG02280.hp1
HG02572.hp1
HG03041.hp1
NA19030.hp1
 intron_variant MODIFIER c.-138+4216G>C
c.-138+4216G>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84510634
chr1:84510827 C
C
 T
T
 1 a0001c0001t0001g0174
a0001c0001t0001g0174
 1 NA20300.hp1
NA20300.hp1
 intron_variant MODIFIER c.-138+4409C>T
c.-138+4409C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84510827
chr1:84510831 A
A
 C
C
 2 a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0010g0147
a0002c0002t0010g0148
 2 NA18952.hp1
NA19072.hp2
NA18952.hp1
NA19072.hp2
 intron_variant MODIFIER c.-138+4413A>C
c.-138+4413A>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84510831
chr1:84511004 C
C
 T
T
 4 a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
others(1): Show 
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
 4 HG01891.hp1
HG02965.hp1
HG03516.hp2
others(1): Show 
HG01891.hp1
HG02965.hp1
HG03516.hp2
HG03540.hp1
 intron_variant MODIFIER c.-138+4586C>T
c.-138+4586C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84511004
chr1:84511123 TTTA
TTTA
 T
T
 4 a0001c0003t0011g0260
a0001c0003t0011g0261
a0002c0002t0003g0262
others(1): Show 
a0001c0003t0011g0260
a0001c0003t0011g0261
a0002c0002t0003g0262
a0002c0002t0003g0263
 4 HG01168.hp1
HG01993.hp1
NA18988.hp2
others(1): Show 
HG01168.hp1
HG01993.hp1
NA18988.hp2
NA19063.hp1
 intron_variant MODIFIER c.-138+4710_-138+471
others(7): Show 
c.-138+4710_-138+4712delTAT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 INFO_REALIGN_3_PRIME chr1 84511123
chr1:84511127 T
T
 C
C
 113 a0001c0001t0001g0001
a0001c0001t0001g0003
a0001c0001t0001g0008
others(110): Show 
a0001c0001t0001g0001
a0001c0001t0001g0003
a0001c0001t0001g0008
a0001c0001t0001g0009
a0001c0001t0001g0025
a0001c0001t0001g0026
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0163
a0001c0001t0001g0164
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0170
a0001c0001t0001g0171
a0001c0001t0001g0172
a0001c0001t0001g0173
a0001c0001t0001g0174
a0001c0001t0001g0175
a0001c0001t0001g0176
a0001c0001t0001g0177
a0001c0001t0001g0178
a0001c0001t0001g0179
a0001c0001t0001g0180
a0001c0001t0001g0181
a0001c0001t0001g0182
a0001c0001t0001g0183
a0001c0001t0001g0184
a0001c0001t0001g0185
a0001c0001t0001g0186
a0001c0001t0001g0187
a0001c0001t0001g0188
a0001c0001t0001g0189
a0001c0001t0001g0190
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0204
a0001c0001t0001g0205
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0213
a0001c0001t0001g0214
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0001g0219
a0001c0001t0001g0220
a0001c0001t0001g0221
a0001c0001t0001g0222
a0001c0001t0001g0223
a0001c0001t0001g0224
a0001c0001t0001g0225
a0001c0001t0001g0226
a0001c0001t0001g0227
a0001c0001t0001g0228
a0001c0001t0001g0230
a0001c0001t0001g0231
a0001c0001t0001g0232
a0001c0001t0001g0233
a0001c0001t0001g0234
a0001c0001t0001g0235
a0001c0001t0001g0236
a0001c0001t0001g0237
a0001c0001t0001g0238
a0001c0001t0001g0239
a0001c0001t0001g0240
a0001c0001t0001g0241
a0001c0001t0001g0243
a0001c0001t0001g0244
a0001c0001t0001g0245
a0001c0001t0001g0246
a0001c0001t0001g0247
a0001c0001t0001g0248
a0001c0001t0001g0249
a0001c0001t0001g0250
a0001c0001t0001g0251
a0001c0001t0001g0252
a0001c0001t0001g0256
a0001c0001t0001g0257
a0001c0001t0001g0258
a0001c0001t0001g0259
a0001c0001t0001g0264
a0001c0001t0001g0265
a0001c0001t0001g0266
a0001c0001t0001g0267
a0001c0001t0001g0268
a0001c0001t0001g0269
a0001c0001t0009g0229
a0001c0001t0013g0165
a0007c0008t0001g0242
 129 HG00140.hp2
HG00280.hp2
HG00408.hp2
others(126): Show 
HG00140.hp2
HG00280.hp2
HG00408.hp2
HG00438.hp2
HG00544.hp2
HG00597.hp1
HG00609.hp2
HG00642.hp1
HG00642.hp2
HG00673.hp2
HG00735.hp2
HG00738.hp1
HG00738.hp2
HG00741.hp1
HG01070.hp2
HG01071.hp2
HG01081.hp2
HG01099.hp2
HG01106.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp1
HG01255.hp2
HG01261.hp2
HG01346.hp2
HG01361.hp1
HG01496.hp1
HG01515.hp1
HG01517.hp2
HG01975.hp2
HG01993.hp2
HG02015.hp2
HG02040.hp1
HG02080.hp2
HG02083.hp2
HG02109.hp2
HG02132.hp1
HG02148.hp1
HG02155.hp2
HG02257.hp1
HG02280.hp2
HG02300.hp2
HG02486.hp2
HG02647.hp2
HG02698.hp2
HG02717.hp1
HG02735.hp1
HG02738.hp2
HG02886.hp1
HG02897.hp1
HG02970.hp2
HG03017.hp1
HG03453.hp1
HG03453.hp2
HG03491.hp2
HG03492.hp2
HG03540.hp2
HG03579.hp1
HG03669.hp2
HG03710.hp1
HG03834.hp2
HG04115.hp1
HG04184.hp2
HG04204.hp2
HG04228.hp2
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18940.hp1
NA18942.hp2
NA18944.hp2
NA18945.hp2
NA18946.hp1
NA18948.hp2
NA18950.hp2
NA18951.hp1
NA18952.hp2
NA18954.hp1
NA18955.hp2
NA18957.hp2
NA18961.hp2
NA18962.hp2
NA18965.hp2
NA18967.hp1
NA18968.hp2
NA18969.hp1
NA18969.hp2
NA18971.hp1
NA18971.hp2
NA18975.hp1
NA18975.hp2
NA18979.hp1
NA18980.hp2
NA18983.hp2
NA18986.hp1
NA18987.hp2
NA18988.hp1
NA18989.hp1
NA18990.hp2
NA18992.hp2
NA18994.hp2
NA19004.hp1
NA19007.hp1
NA19007.hp2
NA19012.hp2
NA19030.hp2
NA19054.hp2
NA19056.hp1
NA19057.hp1
NA19058.hp1
NA19063.hp2
NA19065.hp1
NA19065.hp2
NA19066.hp1
NA19066.hp2
NA19068.hp1
NA19068.hp2
NA19072.hp1
NA19075.hp2
NA19077.hp2
NA19079.hp2
NA19083.hp1
NA19084.hp2
NA19089.hp1
NA19090.hp2
NA19091.hp2
NA20300.hp1
NA20805.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.-138+4709T>C
c.-138+4709T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84511127
chr1:84511184 T
T
 C
C
 4 a0001c0003t0011g0260
a0001c0003t0011g0261
a0002c0002t0003g0262
others(1): Show 
a0001c0003t0011g0260
a0001c0003t0011g0261
a0002c0002t0003g0262
a0002c0002t0003g0263
 4 HG01168.hp1
HG01993.hp1
NA18988.hp2
others(1): Show 
HG01168.hp1
HG01993.hp1
NA18988.hp2
NA19063.hp1
 intron_variant MODIFIER c.-138+4766T>C
c.-138+4766T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84511184
chr1:84511524 T
T
 A
A
 3 a0001c0001t0001g0231
a0001c0001t0001g0232
a0001c0001t0001g0233
a0001c0001t0001g0231
a0001c0001t0001g0232
a0001c0001t0001g0233
 3 HG01517.hp2
HG02738.hp2
HG04228.hp2
HG01517.hp2
HG02738.hp2
HG04228.hp2
 intron_variant MODIFIER c.-137-4699T>A
c.-137-4699T>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84511524
chr1:84511588 C
C
 A
A
 135 a0001c0001t0001g0060
a0001c0001t0007g0017
a0001c0001t0007g0095
others(132): Show 
a0001c0001t0001g0060
a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 158 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(155): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01106.hp1
HG01109.hp2
HG01168.hp1
HG01168.hp2
HG01169.hp2
HG01192.hp2
HG01255.hp1
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01943.hp2
HG01975.hp1
HG01993.hp1
HG02015.hp1
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02145.hp1
HG02148.hp2
HG02155.hp1
HG02257.hp2
HG02258.hp1
HG02293.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03041.hp2
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04184.hp1
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18944.hp1
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18968.hp1
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18988.hp2
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19004.hp2
NA19012.hp1
NA19043.hp2
NA19054.hp1
NA19056.hp2
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19090.hp1
NA19091.hp1
NA19240.hp1
NA20300.hp2
NA20805.hp1
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.-137-4635C>A
c.-137-4635C>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84511588
chr1:84511655 C
C
 CT
CT
 5 a0001c0001t0001g0233
a0001c0006t0008g0016
a0001c0006t0008g0086
others(2): Show 
a0001c0001t0001g0233
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0002c0002t0002g0145
 6 HG02738.hp2
HG02809.hp2
HG03130.hp1
others(3): Show 
HG02738.hp2
HG02809.hp2
HG03130.hp1
NA18961.hp1
NA19043.hp1
NA19240.hp2
 intron_variant MODIFIER c.-137-4553dupT
c.-137-4553dupT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 INFO_REALIGN_3_PRIME chr1 84511655
chr1:84511655 C
C
 CTT
CTT
 6 a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
others(3): Show 
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
 6 HG01109.hp1
HG01261.hp1
HG01515.hp2
others(3): Show 
HG01109.hp1
HG01261.hp1
HG01515.hp2
HG01517.hp1
HG02040.hp2
HG03017.hp2
 intron_variant MODIFIER c.-137-4554_-137-455
others(6): Show 
c.-137-4554_-137-4553dupTT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 INFO_REALIGN_3_PRIME chr1 84511655
chr1:84511655 CT
CT
 C
C
 81 a0001c0001t0001g0060
a0001c0001t0001g0175
a0001c0001t0001g0176
others(78): Show 
a0001c0001t0001g0060
a0001c0001t0001g0175
a0001c0001t0001g0176
a0001c0001t0001g0234
a0001c0003t0001g0075
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0014g0061
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0084
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 98 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(95): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG00639.hp2
HG00673.hp2
HG00741.hp2
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01993.hp1
HG02055.hp1
HG02055.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp2
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02293.hp2
HG02451.hp2
HG02486.hp1
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03017.hp1
HG03041.hp1
HG03041.hp2
HG03130.hp2
HG03195.hp1
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03486.hp1
HG03491.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03669.hp1
HG03834.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18988.hp2
NA18989.hp2
NA19004.hp2
NA19030.hp1
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19089.hp2
NA19091.hp2
NA19240.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.-137-4553delT
c.-137-4553delT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 INFO_REALIGN_3_PRIME chr1 84511655
chr1:84511655 CTTTTTTT
others(20): Show 
CTTTTTTTTTTTTTTTCTTTCTTTCTTT
 C
C
 1 a0002c0002t0003g0146
a0002c0002t0003g0146
 1 HG01109.hp2
HG01109.hp2
 intron_variant MODIFIER c.-137-4552_-137-452
others(31): Show 
c.-137-4552_-137-4526delCTTTCTTTCTTTTTTTTTTTTTTTTT
T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 INFO_REALIGN_3_PRIME chr1 84511655
chr1:84511667 T
T
 C
C
 2 a0001c0003t0004g0041
a0002c0002t0002g0099
a0001c0003t0004g0041
a0002c0002t0002g0099
 2 HG01346.hp1
NA18747.hp2
HG01346.hp1
NA18747.hp2
 intron_variant MODIFIER c.-137-4556T>C
c.-137-4556T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84511667
chr1:84511678 TC
TC
 T
T
 43 a0001c0001t0001g0060
a0001c0003t0004g0002
a0001c0003t0004g0041
others(40): Show 
a0001c0001t0001g0060
a0001c0003t0004g0002
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0006t0014g0061
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0012g0082
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0005c0009t0012g0083
a0006c0007t0001g0035
 55 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(52): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG00639.hp2
HG01192.hp2
HG01346.hp1
HG01943.hp1
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02258.hp1
HG02293.hp2
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02818.hp1
HG02895.hp1
HG02922.hp1
HG02965.hp2
HG02976.hp1
HG03041.hp2
HG03130.hp2
HG03195.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03516.hp1
HG03669.hp1
HG03834.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19089.hp2
 intron_variant MODIFIER c.-137-4544delC
c.-137-4544delC
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84511678
chr1:84511679 C
C
 T
T
 23 a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
others(20): Show 
a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 25 HG00741.hp2
HG01168.hp2
HG01169.hp2
others(22): Show 
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01975.hp1
HG02055.hp1
HG02698.hp1
HG02818.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA19240.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.-137-4544C>T
c.-137-4544C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84511679
chr1:84511679 CT
CT
 C
C
 5 a0001c0001t0001g0177
a0001c0006t0008g0016
a0001c0006t0008g0086
others(2): Show 
a0001c0001t0001g0177
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0002c0002t0007g0100
 6 HG02809.hp2
HG03130.hp1
NA18954.hp2
others(3): Show 
HG02809.hp2
HG03130.hp1
NA18954.hp2
NA18955.hp2
NA19043.hp1
NA19240.hp2
 intron_variant MODIFIER c.-137-4525delT
c.-137-4525delT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 INFO_REALIGN_3_PRIME chr1 84511679
chr1:84511679 CTT
CTT
 C
C
 15 a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
others(12): Show 
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
 18 HG01070.hp1
HG01071.hp1
HG01081.hp1
others(15): Show 
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01109.hp1
HG01167.hp1
HG01169.hp1
HG01261.hp1
HG01515.hp2
HG01517.hp1
HG02040.hp2
HG02145.hp2
HG02258.hp2
HG02280.hp1
HG02572.hp1
HG03017.hp2
HG03041.hp1
NA19030.hp1
 intron_variant MODIFIER c.-137-4526_-137-452
others(6): Show 
c.-137-4526_-137-4525delTT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 INFO_REALIGN_3_PRIME chr1 84511679
chr1:84511687 T
T
 C
C
 21 a0001c0003t0004g0002
a0001c0003t0004g0041
a0001c0003t0004g0042
others(18): Show 
a0001c0003t0004g0002
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0009g0013
 26 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(23): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG01192.hp2
HG01346.hp1
HG01943.hp1
HG02145.hp1
HG02148.hp2
HG02293.hp2
HG02572.hp2
HG02622.hp1
HG02717.hp2
HG03834.hp1
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19089.hp2
 intron_variant MODIFIER c.-137-4536T>C
c.-137-4536T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84511687
chr1:84511718 G
G
 T
T
 6 a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
others(3): Show 
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
 9 HG01070.hp1
HG01071.hp1
HG01081.hp1
others(6): Show 
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01167.hp1
HG01169.hp1
HG02280.hp1
HG02572.hp1
HG03041.hp1
NA19030.hp1
 intron_variant MODIFIER c.-137-4505G>T
c.-137-4505G>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84511718
chr1:84511973 C
C
 T
T
 4 a0001c0003t0011g0260
a0001c0003t0011g0261
a0002c0002t0003g0262
others(1): Show 
a0001c0003t0011g0260
a0001c0003t0011g0261
a0002c0002t0003g0262
a0002c0002t0003g0263
 4 HG01168.hp1
HG01993.hp1
NA18988.hp2
others(1): Show 
HG01168.hp1
HG01993.hp1
NA18988.hp2
NA19063.hp1
 intron_variant MODIFIER c.-137-4250C>T
c.-137-4250C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84511973
chr1:84512011 A
A
 G
G
 1 a0001c0001t0001g0269
a0001c0001t0001g0269
 1 NA18975.hp1
NA18975.hp1
 intron_variant MODIFIER c.-137-4212A>G
c.-137-4212A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84512011
chr1:84512090 A
A
 G
G
 71 a0001c0001t0001g0060
a0001c0003t0001g0075
a0001c0003t0004g0002
others(68): Show 
a0001c0001t0001g0060
a0001c0003t0001g0075
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0014g0061
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 85 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(82): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG00639.hp2
HG00741.hp2
HG01168.hp1
HG01168.hp2
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG01993.hp1
HG02055.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02258.hp1
HG02293.hp2
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03041.hp2
HG03130.hp2
HG03195.hp1
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03669.hp1
HG03834.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18988.hp2
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19089.hp2
NA19240.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.-137-4133A>G
c.-137-4133A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84512090
chr1:84512105 A
A
 G
G
 1 a0002c0002t0002g0144
a0002c0002t0002g0144
 1 NA18965.hp1
NA18965.hp1
 intron_variant MODIFIER c.-137-4118A>G
c.-137-4118A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84512105
chr1:84512238 C
C
 G
G
 1 a0002c0002t0003g0143
a0002c0002t0003g0143
 1 HG02976.hp2
HG02976.hp2
 intron_variant MODIFIER c.-137-3985C>G
c.-137-3985C>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84512238
chr1:84512357 T
T
 A
A
 1 a0001c0001t0001g0178
a0001c0001t0001g0178
 1 NA19075.hp2
NA19075.hp2
 intron_variant MODIFIER c.-137-3866T>A
c.-137-3866T>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84512357
chr1:84512358 A
A
 G
G
 1 a0001c0001t0001g0178
a0001c0001t0001g0178
 1 NA19075.hp2
NA19075.hp2
 intron_variant MODIFIER c.-137-3865A>G
c.-137-3865A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84512358
chr1:84512359 G
G
 A
A
 1 a0001c0001t0001g0178
a0001c0001t0001g0178
 1 NA19075.hp2
NA19075.hp2
 intron_variant MODIFIER c.-137-3864G>A
c.-137-3864G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84512359
chr1:84512450 G
G
 C
C
 2 a0002c0002t0002g0006
a0002c0002t0002g0101
a0002c0002t0002g0006
a0002c0002t0002g0101
 4 NA18950.hp1
NA18955.hp1
NA18987.hp1
others(1): Show 
NA18950.hp1
NA18955.hp1
NA18987.hp1
NA18990.hp1
 intron_variant MODIFIER c.-137-3773G>C
c.-137-3773G>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84512450
chr1:84512536 C
C
 T
T
 15 a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
others(12): Show 
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0006c0007t0001g0035
 20 HG00639.hp2
HG01891.hp2
HG02055.hp1
others(17): Show 
HG00639.hp2
HG01891.hp2
HG02055.hp1
HG02257.hp2
HG02451.hp2
HG02486.hp1
HG02622.hp2
HG02647.hp1
HG02723.hp1
HG02818.hp1
HG02922.hp1
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp2
HG03225.hp2
HG03486.hp1
HG06807.hp2
NA18522.hp2
NA19240.hp1
 intron_variant MODIFIER c.-137-3687C>T
c.-137-3687C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84512536
chr1:84512545 T
T
 C
C
 1 a0001c0003t0003g0102
a0001c0003t0003g0102
 1 HG03195.hp2
HG03195.hp2
 intron_variant MODIFIER c.-137-3678T>C
c.-137-3678T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84512545
chr1:84512584 C
C
 T
T
 1 a0001c0001t0001g0157
a0001c0001t0001g0157
 1 NA18967.hp1
NA18967.hp1
 intron_variant MODIFIER c.-137-3639C>T
c.-137-3639C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84512584
chr1:84512648 G
G
 A
A
 1 a0001c0001t0001g0179
a0001c0001t0001g0179
 1 HG01515.hp1
HG01515.hp1
 intron_variant MODIFIER c.-137-3575G>A
c.-137-3575G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84512648
chr1:84512749 T
T
 C
C
 27 a0001c0001t0001g0060
a0001c0003t0004g0002
a0001c0003t0004g0040
others(24): Show 
a0001c0001t0001g0060
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0009g0013
a0001c0006t0014g0061
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
 32 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(29): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG01192.hp2
HG01346.hp1
HG01943.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02293.hp2
HG02572.hp2
HG02622.hp1
HG02630.hp1
HG02717.hp2
HG02723.hp2
HG03130.hp2
HG03471.hp1
HG03516.hp1
HG03834.hp1
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19089.hp2
 intron_variant MODIFIER c.-137-3474T>C
c.-137-3474T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84512749
chr1:84512806 C
C
 G
G
 64 a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
others(61): Show 
a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 73 HG00280.hp1
HG00408.hp1
HG00438.hp1
others(70): Show 
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00609.hp1
HG00621.hp2
HG00673.hp1
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01255.hp1
HG01943.hp2
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02155.hp1
HG02293.hp1
HG02300.hp1
HG02451.hp1
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03195.hp2
HG03471.hp2
HG03486.hp2
HG03492.hp1
HG03579.hp2
HG03710.hp2
HG04115.hp2
HG04199.hp2
HG04204.hp1
HG04228.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19012.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19090.hp1
NA19091.hp1
NA20300.hp2
NA21309.hp2
 intron_variant MODIFIER c.-137-3417C>G
c.-137-3417C>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84512806
chr1:84513017 G
G
 A
A
 1 a0001c0001t0001g0180
a0001c0001t0001g0180
 1 NA18975.hp2
NA18975.hp2
 intron_variant MODIFIER c.-137-3206G>A
c.-137-3206G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84513017
chr1:84513038 CAT
CAT
 C
C
 71 a0001c0001t0001g0060
a0001c0003t0001g0075
a0001c0003t0004g0002
others(68): Show 
a0001c0001t0001g0060
a0001c0003t0001g0075
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0014g0061
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 85 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(82): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG00639.hp2
HG00741.hp2
HG01168.hp1
HG01168.hp2
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG01993.hp1
HG02055.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02258.hp1
HG02293.hp2
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03041.hp2
HG03130.hp2
HG03195.hp1
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03669.hp1
HG03834.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18988.hp2
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19089.hp2
NA19240.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.-137-3184_-137-318
others(6): Show 
c.-137-3184_-137-3183delAT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84513038
chr1:84513163 A
A
 G
G
 1 a0002c0002t0005g0024
a0002c0002t0005g0024
 2 HG02280.hp1
HG03041.hp1
HG02280.hp1
HG03041.hp1
 intron_variant MODIFIER c.-137-3060A>G
c.-137-3060A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84513163
chr1:84513169 G
G
 C
C
 15 a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
others(12): Show 
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0006c0007t0001g0035
 20 HG00639.hp2
HG01891.hp2
HG02055.hp1
others(17): Show 
HG00639.hp2
HG01891.hp2
HG02055.hp1
HG02257.hp2
HG02451.hp2
HG02486.hp1
HG02622.hp2
HG02647.hp1
HG02723.hp1
HG02818.hp1
HG02922.hp1
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp2
HG03225.hp2
HG03486.hp1
HG06807.hp2
NA18522.hp2
NA19240.hp1
 intron_variant MODIFIER c.-137-3054G>C
c.-137-3054G>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84513169
chr1:84513190 G
G
 A
A
 1 a0001c0001t0001g0159
a0001c0001t0001g0159
 1 HG02970.hp2
HG02970.hp2
 intron_variant MODIFIER c.-137-3033G>A
c.-137-3033G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84513190
chr1:84513769 G
G
 A
A
 9 a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
others(6): Show 
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
 12 HG01070.hp1
HG01071.hp1
HG01081.hp1
others(9): Show 
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01167.hp1
HG01169.hp1
HG02145.hp2
HG02258.hp2
HG02280.hp1
HG02572.hp1
HG03041.hp1
NA19030.hp1
 intron_variant MODIFIER c.-137-2454G>A
c.-137-2454G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84513769
chr1:84513777 T
T
 G
G
 7 a0001c0003t0011g0260
a0001c0003t0011g0261
a0002c0002t0003g0262
others(4): Show 
a0001c0003t0011g0260
a0001c0003t0011g0261
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0150
a0002c0002t0005g0154
a0002c0002t0005g0155
 7 HG01099.hp1
HG01168.hp1
HG01993.hp1
others(4): Show 
HG01099.hp1
HG01168.hp1
HG01993.hp1
HG02145.hp2
HG02258.hp2
NA18988.hp2
NA19063.hp1
 intron_variant MODIFIER c.-137-2446T>G
c.-137-2446T>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84513777
chr1:84513842 A
A
 AT
AT
 31 a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0223
others(28): Show 
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0223
a0001c0001t0001g0224
a0001c0001t0001g0252
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0093
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0002c0002t0002g0085
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0005g0150
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0010g0148
 34 HG00280.hp1
HG00438.hp1
HG00609.hp1
others(31): Show 
HG00280.hp1
HG00438.hp1
HG00609.hp1
HG00621.hp2
HG00735.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01515.hp2
HG01517.hp1
HG02015.hp2
HG02040.hp2
HG02083.hp1
HG02145.hp2
HG02258.hp2
HG02300.hp1
HG02735.hp2
HG02738.hp1
HG02809.hp2
HG03130.hp1
HG03492.hp1
HG03834.hp2
HG04228.hp1
NA18951.hp2
NA18980.hp1
NA18987.hp2
NA18989.hp1
NA18992.hp2
NA19043.hp1
NA19072.hp2
NA19077.hp1
NA19090.hp1
NA19240.hp2
NA21309.hp2
 intron_variant MODIFIER c.-137-2364dupT
c.-137-2364dupT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 INFO_REALIGN_3_PRIME chr1 84513842
chr1:84513842 A
A
 ATT
ATT
 11 a0001c0003t0001g0091
a0001c0003t0001g0092
a0002c0002t0003g0098
others(8): Show 
a0001c0003t0001g0091
a0001c0003t0001g0092
a0002c0002t0003g0098
a0002c0002t0003g0142
a0002c0002t0003g0149
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
 14 HG01070.hp1
HG01071.hp1
HG01081.hp1
others(11): Show 
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01167.hp1
HG01169.hp1
HG01261.hp1
HG02280.hp1
HG02572.hp1
HG03017.hp2
HG03041.hp1
HG03710.hp2
HG04115.hp2
NA18994.hp1
NA19030.hp1
 intron_variant MODIFIER c.-137-2365_-137-236
others(6): Show 
c.-137-2365_-137-2364dupTT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 INFO_REALIGN_3_PRIME chr1 84513842
chr1:84513842 A
A
 ATTTTT
ATTTTT
 12 a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
others(9): Show 
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0011g0260
a0001c0003t0011g0261
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0012g0082
a0005c0009t0012g0083
 14 HG01168.hp1
HG01993.hp1
HG02258.hp1
others(11): Show 
HG01168.hp1
HG01993.hp1
HG02258.hp1
HG02630.hp1
HG02630.hp2
HG02895.hp1
HG02965.hp2
HG03225.hp1
HG03471.hp1
HG03491.hp1
HG03516.hp1
HG03669.hp1
NA18988.hp2
NA19063.hp1
 intron_variant MODIFIER c.-137-2368_-137-236
others(9): Show 
c.-137-2368_-137-2364dupTTTTT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 INFO_REALIGN_3_PRIME chr1 84513842
chr1:84513842 A
A
 ATTTTTT
ATTTTTT
 22 a0001c0001t0001g0060
a0001c0003t0004g0055
a0001c0003t0004g0056
others(19): Show 
a0001c0001t0001g0060
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0006t0014g0061
a0003c0004t0001g0066
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0006c0007t0001g0035
 27 HG00639.hp2
HG01496.hp2
HG01891.hp2
others(24): Show 
HG00639.hp2
HG01496.hp2
HG01891.hp2
HG02055.hp1
HG02145.hp1
HG02257.hp2
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02647.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02818.hp1
HG02922.hp1
HG03041.hp2
HG03130.hp2
HG03195.hp1
HG03209.hp2
HG03225.hp2
HG03486.hp1
HG06807.hp2
NA18522.hp2
NA19043.hp2
NA19240.hp1
 intron_variant MODIFIER c.-137-2369_-137-236
others(10): Show 
c.-137-2369_-137-2364dupTTTTTT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 INFO_REALIGN_3_PRIME chr1 84513842
chr1:84513842 A
A
 ATTTTTTT
ATTTTTTT
 19 a0001c0003t0001g0075
a0001c0003t0004g0040
a0003c0004t0001g0014
others(16): Show 
a0001c0003t0001g0075
a0001c0003t0004g0040
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0036
 21 HG00741.hp2
HG01168.hp2
HG01169.hp2
others(18): Show 
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01891.hp1
HG01975.hp1
HG02055.hp2
HG02698.hp1
HG02818.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG02976.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG06807.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.-137-2370_-137-236
others(11): Show 
c.-137-2370_-137-2364dupTTTTTTT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 INFO_REALIGN_3_PRIME chr1 84513842
chr1:84513842 AT
AT
 A
A
 9 a0001c0003t0003g0105
a0001c0003t0003g0110
a0002c0002t0003g0103
others(6): Show 
a0001c0003t0003g0105
a0001c0003t0003g0110
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0143
a0002c0002t0007g0106
 9 HG02109.hp1
HG02451.hp1
HG02809.hp1
others(6): Show 
HG02109.hp1
HG02451.hp1
HG02809.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03486.hp2
HG03579.hp2
NA20300.hp2
 intron_variant MODIFIER c.-137-2364delT
c.-137-2364delT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 INFO_REALIGN_3_PRIME chr1 84513842
chr1:84514033 C
C
 T
T
 1 a0001c0001t0001g0222
a0001c0001t0001g0222
 1 NA18946.hp1
NA18946.hp1
 intron_variant MODIFIER c.-137-2190C>T
c.-137-2190C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84514033
chr1:84514186 T
T
 C
C
 71 a0001c0001t0001g0060
a0001c0003t0001g0075
a0001c0003t0004g0002
others(68): Show 
a0001c0001t0001g0060
a0001c0003t0001g0075
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0014g0061
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 85 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(82): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG00639.hp2
HG00741.hp2
HG01168.hp1
HG01168.hp2
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG01993.hp1
HG02055.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02258.hp1
HG02293.hp2
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03041.hp2
HG03130.hp2
HG03195.hp1
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03669.hp1
HG03834.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18988.hp2
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19089.hp2
NA19240.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.-137-2037T>C
c.-137-2037T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84514186
chr1:84514227 T
T
 C
C
 1 a0002c0002t0005g0150
a0002c0002t0005g0150
 1 HG01099.hp1
HG01099.hp1
 intron_variant MODIFIER c.-137-1996T>C
c.-137-1996T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84514227
chr1:84514324 C
C
 G
G
 5 a0002c0002t0003g0128
a0002c0002t0007g0100
a0002c0002t0007g0129
others(2): Show 
a0002c0002t0003g0128
a0002c0002t0007g0100
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
 5 HG00408.hp1
NA18954.hp2
NA18962.hp1
others(2): Show 
HG00408.hp1
NA18954.hp2
NA18962.hp1
NA18986.hp2
NA19056.hp2
 intron_variant MODIFIER c.-137-1899C>G
c.-137-1899C>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84514324
chr1:84514380 C
C
 G
G
 1 a0001c0001t0007g0127
a0001c0001t0007g0127
 1 HG02293.hp1
HG02293.hp1
 intron_variant MODIFIER c.-137-1843C>G
c.-137-1843C>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84514380
chr1:84514427 T
T
 C
C
 1 a0001c0001t0001g0169
a0001c0001t0001g0169
 1 NA18522.hp1
NA18522.hp1
 intron_variant MODIFIER c.-137-1796T>C
c.-137-1796T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84514427
chr1:84514459 G
G
 A
A
 1 a0003c0004t0001g0067
a0003c0004t0001g0067
 1 HG06807.hp1
HG06807.hp1
 intron_variant MODIFIER c.-137-1764G>A
c.-137-1764G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84514459
chr1:84514522 A
A
 G
G
 65 a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
others(62): Show 
a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
a0001c0001t0013g0165
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 74 HG00280.hp1
HG00408.hp1
HG00438.hp1
others(71): Show 
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00609.hp1
HG00621.hp2
HG00673.hp1
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01255.hp1
HG01943.hp2
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02155.hp1
HG02293.hp1
HG02300.hp1
HG02451.hp1
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03195.hp2
HG03453.hp1
HG03471.hp2
HG03486.hp2
HG03492.hp1
HG03579.hp2
HG03710.hp2
HG04115.hp2
HG04199.hp2
HG04204.hp1
HG04228.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19012.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19090.hp1
NA19091.hp1
NA20300.hp2
NA21309.hp2
 intron_variant MODIFIER c.-137-1701A>G
c.-137-1701A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84514522
chr1:84514537 T
T
 C
C
 64 a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
others(61): Show 
a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 73 HG00280.hp1
HG00408.hp1
HG00438.hp1
others(70): Show 
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00609.hp1
HG00621.hp2
HG00673.hp1
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01255.hp1
HG01943.hp2
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02155.hp1
HG02293.hp1
HG02300.hp1
HG02451.hp1
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03195.hp2
HG03471.hp2
HG03486.hp2
HG03492.hp1
HG03579.hp2
HG03710.hp2
HG04115.hp2
HG04199.hp2
HG04204.hp1
HG04228.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19012.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19090.hp1
NA19091.hp1
NA20300.hp2
NA21309.hp2
 intron_variant MODIFIER c.-137-1686T>C
c.-137-1686T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84514537
chr1:84514554 G
G
 C
C
 153 a0001c0001t0001g0060
a0001c0001t0007g0017
a0001c0001t0007g0095
others(150): Show 
a0001c0001t0001g0060
a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
a0001c0003t0001g0075
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 180 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(177): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01192.hp2
HG01255.hp1
HG01261.hp1
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01515.hp2
HG01517.hp1
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01943.hp2
HG01975.hp1
HG01993.hp1
HG02015.hp1
HG02040.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp2
HG02155.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02293.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp2
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04184.hp1
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18944.hp1
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18968.hp1
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18988.hp2
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19004.hp2
NA19012.hp1
NA19030.hp1
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19056.hp2
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19090.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
NA20805.hp1
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.-137-1669G>C
c.-137-1669G>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84514554
chr1:84514560 T
T
 G
G
 20 a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
others(17): Show 
a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
 22 HG00741.hp2
HG01168.hp2
HG01169.hp2
others(19): Show 
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02698.hp1
HG02818.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.-137-1663T>G
c.-137-1663T>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84514560
chr1:84514745 C
C
 G
G
 1 a0001c0001t0001g0251
a0001c0001t0001g0251
 1 HG00738.hp2
HG00738.hp2
 intron_variant MODIFIER c.-137-1478C>G
c.-137-1478C>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84514745
chr1:84514753 TTGAGGTC
others(9): Show 
TTGAGGTCAGTGGTTTG
 T
T
 5 a0001c0001t0001g0181
a0001c0001t0001g0182
a0001c0001t0001g0183
others(2): Show 
a0001c0001t0001g0181
a0001c0001t0001g0182
a0001c0001t0001g0183
a0001c0001t0001g0184
a0001c0001t0001g0223
 5 NA18944.hp2
NA18948.hp2
NA18965.hp2
others(2): Show 
NA18944.hp2
NA18948.hp2
NA18965.hp2
NA18988.hp1
NA18989.hp1
 intron_variant MODIFIER c.-137-1469_-137-145
others(20): Show 
c.-137-1469_-137-1454delTGAGGTCAGTGGTTTG
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84514753
chr1:84514819 A
A
 G
G
 3 a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
 5 HG02258.hp1
HG02630.hp2
HG02895.hp1
others(2): Show 
HG02258.hp1
HG02630.hp2
HG02895.hp1
HG02965.hp2
HG03225.hp1
 intron_variant MODIFIER c.-137-1404A>G
c.-137-1404A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84514819
chr1:84514880 A
A
 G
G
 1 a0001c0003t0003g0110
a0001c0003t0003g0110
 1 NA20300.hp2
NA20300.hp2
 intron_variant MODIFIER c.-137-1343A>G
c.-137-1343A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84514880
chr1:84515183 TA
TA
 T
T
 20 a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
others(17): Show 
a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
 22 HG00741.hp2
HG01168.hp2
HG01169.hp2
others(19): Show 
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02698.hp1
HG02818.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.-137-1039delA
c.-137-1039delA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84515183
chr1:84515200 A
A
 G
G
 1 a0001c0001t0001g0221
a0001c0001t0001g0221
 1 HG01993.hp2
HG01993.hp2
 intron_variant MODIFIER c.-137-1023A>G
c.-137-1023A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84515200
chr1:84515240 A
A
 T
T
 40 a0001c0003t0001g0075
a0001c0003t0006g0004
a0001c0003t0006g0027
others(37): Show 
a0001c0003t0001g0075
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 49 HG00639.hp2
HG00741.hp2
HG01168.hp2
others(46): Show 
HG00639.hp2
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01975.hp1
HG02055.hp1
HG02257.hp2
HG02258.hp1
HG02451.hp2
HG02486.hp1
HG02622.hp2
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02723.hp1
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03486.hp1
HG03491.hp1
HG03516.hp2
HG03540.hp1
HG03669.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA19240.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.-137-983A>T
c.-137-983A>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84515240
chr1:84515342 C
C
 T
T
 71 a0001c0001t0001g0060
a0001c0003t0001g0075
a0001c0003t0004g0002
others(68): Show 
a0001c0001t0001g0060
a0001c0003t0001g0075
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0014g0061
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 85 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(82): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG00639.hp2
HG00741.hp2
HG01168.hp1
HG01168.hp2
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG01993.hp1
HG02055.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02258.hp1
HG02293.hp2
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03041.hp2
HG03130.hp2
HG03195.hp1
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03669.hp1
HG03834.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18988.hp2
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19089.hp2
NA19240.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.-137-881C>T
c.-137-881C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84515342
chr1:84515382 T
T
 TAAAACAA
others(323): Show 
TAAAACAATTAGTGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGC
GCTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCA
TCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTA
GCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG
GCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGAT
TGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAACGAGACTCCGT
CTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
 1 a0002c0002t0006g0063
a0002c0002t0006g0063
 1 HG03471.hp1
HG03471.hp1
 intron_variant MODIFIER c.-137-828_-137-827i
others(332): Show 
c.-137-828_-137-827insTGGCCGGGCGCGGTGGCTCACGCCTGTA
ATCCCAGCGCTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGAT
CGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACA
AAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGG
AGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGA
GCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAACGA
GACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAATTAG
TG
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 INFO_REALIGN_3_PRIME chr1 84515382
chr1:84515382 T
T
 TAAAACAA
others(325): Show 
TAAAACAATTAGTGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGC
GCTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCA
TCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTA
GCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG
GCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGAT
TGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAACGAGACTCCGT
CTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
 1 a0002c0002t0006g0062
a0002c0002t0006g0062
 1 HG03516.hp1
HG03516.hp1
 intron_variant MODIFIER c.-137-828_-137-827i
others(334): Show 
c.-137-828_-137-827insTGGCCGGGCGCGGTGGCTCACGCCTGTA
ATCCCAGCGCTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGAT
CGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACA
AAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGG
AGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGA
GCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAACGA
GACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAATT
AGTG
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 INFO_REALIGN_3_PRIME chr1 84515382
chr1:84515382 T
T
 TAAAACAA
others(340): Show 
TAAAACAATTAGTGTGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGC
GCTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGATCGAGACCA
TCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTA
GCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG
GCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGAT
TGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAACGAGACTCCGT
CTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
 1 a0002c0002t0006g0084
a0002c0002t0006g0084
 1 HG02630.hp1
HG02630.hp1
 intron_variant MODIFIER c.-137-828_-137-827i
others(349): Show 
c.-137-828_-137-827insTGGCCGGGCGCGGTGGCTCACGCCTGTA
ATCCCAGCGCTTTGGGAGGCCGAGGCGGGTGGATCATGAGGTCAGGAGAT
CGAGACCATCCTGGCTAACAAGGTGAAACCCCGTCTCTACTAAAAATACA
AAAAATTAGCCGGGCGCGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGG
AGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAAGCGGAGCTTGCAGTGA
GCCGAGATTGCGCCACTGCAGTCCGCAGTCCGGCCTGGGCGACAGAACGA
GACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAACAATTAGTG
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 INFO_REALIGN_3_PRIME chr1 84515382
chr1:84515416 G
G
 T
T
 4 a0001c0003t0011g0260
a0001c0003t0011g0261
a0002c0002t0003g0262
others(1): Show 
a0001c0003t0011g0260
a0001c0003t0011g0261
a0002c0002t0003g0262
a0002c0002t0003g0263
 4 HG01168.hp1
HG01993.hp1
NA18988.hp2
others(1): Show 
HG01168.hp1
HG01993.hp1
NA18988.hp2
NA19063.hp1
 intron_variant MODIFIER c.-137-807G>T
c.-137-807G>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84515416
chr1:84515634 A
A
 G
G
 1 a0001c0003t0004g0059
a0001c0003t0004g0059
 1 HG02572.hp2
HG02572.hp2
 intron_variant MODIFIER c.-137-589A>G
c.-137-589A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84515634
chr1:84515722 T
T
 A
A
 153 a0001c0001t0001g0060
a0001c0001t0007g0017
a0001c0001t0007g0095
others(150): Show 
a0001c0001t0001g0060
a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
a0001c0003t0001g0075
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 180 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(177): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01192.hp2
HG01255.hp1
HG01261.hp1
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01515.hp2
HG01517.hp1
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01943.hp2
HG01975.hp1
HG01993.hp1
HG02015.hp1
HG02040.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp2
HG02155.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02293.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp2
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04184.hp1
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18944.hp1
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18968.hp1
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18988.hp2
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19004.hp2
NA19012.hp1
NA19030.hp1
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19056.hp2
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19090.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
NA20805.hp1
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.-137-501T>A
c.-137-501T>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84515722
chr1:84515812 A
A
 C
C
 65 a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
others(62): Show 
a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
a0001c0001t0013g0165
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 74 HG00280.hp1
HG00408.hp1
HG00438.hp1
others(71): Show 
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00609.hp1
HG00621.hp2
HG00673.hp1
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01255.hp1
HG01943.hp2
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02155.hp1
HG02293.hp1
HG02300.hp1
HG02451.hp1
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03195.hp2
HG03453.hp1
HG03471.hp2
HG03486.hp2
HG03492.hp1
HG03579.hp2
HG03710.hp2
HG04115.hp2
HG04199.hp2
HG04204.hp1
HG04228.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19012.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19090.hp1
NA19091.hp1
NA20300.hp2
NA21309.hp2
 intron_variant MODIFIER c.-137-411A>C
c.-137-411A>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84515812
chr1:84515986 C
C
 A
A
 20 a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
others(17): Show 
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0002c0002t0012g0082
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 27 HG00639.hp2
HG01891.hp2
HG02055.hp1
others(24): Show 
HG00639.hp2
HG01891.hp2
HG02055.hp1
HG02257.hp2
HG02258.hp1
HG02451.hp2
HG02486.hp1
HG02622.hp2
HG02630.hp2
HG02647.hp1
HG02723.hp1
HG02818.hp1
HG02895.hp1
HG02922.hp1
HG02965.hp2
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03486.hp1
HG03491.hp1
HG03669.hp1
HG06807.hp2
NA18522.hp2
NA19240.hp1
 intron_variant MODIFIER c.-137-237C>A
c.-137-237C>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84515986
chr1:84516129 G
G
 A
A
 1 a0001c0001t0001g0226
a0001c0001t0001g0226
 1 HG01175.hp2
HG01175.hp2
 intron_variant MODIFIER c.-137-94G>A
c.-137-94G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84516129
chr1:84516171 G
G
 A
A
 9 a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
others(6): Show 
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
 12 HG01070.hp1
HG01071.hp1
HG01081.hp1
others(9): Show 
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01167.hp1
HG01169.hp1
HG02145.hp2
HG02258.hp2
HG02280.hp1
HG02572.hp1
HG03041.hp1
NA19030.hp1
 intron_variant MODIFIER c.-137-52G>A
c.-137-52G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 1/13 chr1 84516171
chr1:84516486 A
A
 G
G
 3 a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
 5 HG02258.hp1
HG02630.hp2
HG02895.hp1
others(2): Show 
HG02258.hp1
HG02630.hp2
HG02895.hp1
HG02965.hp2
HG03225.hp1
 intron_variant MODIFIER c.36+91A>G
c.36+91A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84516486
chr1:84516553 G
G
 A
A
 20 a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
others(17): Show 
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0002c0002t0012g0082
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 27 HG00639.hp2
HG01891.hp2
HG02055.hp1
others(24): Show 
HG00639.hp2
HG01891.hp2
HG02055.hp1
HG02257.hp2
HG02258.hp1
HG02451.hp2
HG02486.hp1
HG02622.hp2
HG02630.hp2
HG02647.hp1
HG02723.hp1
HG02818.hp1
HG02895.hp1
HG02922.hp1
HG02965.hp2
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03486.hp1
HG03491.hp1
HG03669.hp1
HG06807.hp2
NA18522.hp2
NA19240.hp1
 intron_variant MODIFIER c.36+158G>A
c.36+158G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84516553
chr1:84516576 T
T
 C
C
 154 a0001c0001t0001g0060
a0001c0001t0007g0017
a0001c0001t0007g0095
others(151): Show 
a0001c0001t0001g0060
a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
a0001c0001t0013g0165
a0001c0003t0001g0075
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 181 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(178): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01192.hp2
HG01255.hp1
HG01261.hp1
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01515.hp2
HG01517.hp1
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01943.hp2
HG01975.hp1
HG01993.hp1
HG02015.hp1
HG02040.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp2
HG02155.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02293.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp2
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03453.hp1
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04184.hp1
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18944.hp1
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18968.hp1
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18988.hp2
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19004.hp2
NA19012.hp1
NA19030.hp1
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19056.hp2
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19090.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
NA20805.hp1
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.36+181T>C
c.36+181T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84516576
chr1:84516679 C
C
 T
T
 1 a0002c0002t0003g0141
a0002c0002t0003g0141
 1 NA18980.hp1
NA18980.hp1
 intron_variant MODIFIER c.36+284C>T
c.36+284C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84516679
chr1:84517293 C
C
 A
A
 71 a0001c0001t0001g0060
a0001c0003t0001g0075
a0001c0003t0004g0002
others(68): Show 
a0001c0001t0001g0060
a0001c0003t0001g0075
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0014g0061
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 85 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(82): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG00639.hp2
HG00741.hp2
HG01168.hp1
HG01168.hp2
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG01993.hp1
HG02055.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02258.hp1
HG02293.hp2
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03041.hp2
HG03130.hp2
HG03195.hp1
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03491.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03669.hp1
HG03834.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18988.hp2
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19089.hp2
NA19240.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.36+898C>A
c.36+898C>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84517293
chr1:84517303 G
G
 C
C
 9 a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
others(6): Show 
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
 12 HG01070.hp1
HG01071.hp1
HG01081.hp1
others(9): Show 
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01167.hp1
HG01169.hp1
HG02145.hp2
HG02258.hp2
HG02280.hp1
HG02572.hp1
HG03041.hp1
NA19030.hp1
 intron_variant MODIFIER c.36+908G>C
c.36+908G>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84517303
chr1:84517452 C
C
 T
T
 3 a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
 3 HG02630.hp1
HG03471.hp1
HG03516.hp1
HG02630.hp1
HG03471.hp1
HG03516.hp1
 intron_variant MODIFIER c.36+1057C>T
c.36+1057C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84517452
chr1:84517725 T
T
 TA
TA
 4 a0001c0003t0011g0260
a0001c0003t0011g0261
a0002c0002t0003g0262
others(1): Show 
a0001c0003t0011g0260
a0001c0003t0011g0261
a0002c0002t0003g0262
a0002c0002t0003g0263
 4 HG01168.hp1
HG01993.hp1
NA18988.hp2
others(1): Show 
HG01168.hp1
HG01993.hp1
NA18988.hp2
NA19063.hp1
 intron_variant MODIFIER c.36+1333dupA
c.36+1333dupA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 INFO_REALIGN_3_PRIME chr1 84517725
chr1:84517799 C
C
 T
T
 64 a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
others(61): Show 
a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 73 HG00280.hp1
HG00408.hp1
HG00438.hp1
others(70): Show 
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00609.hp1
HG00621.hp2
HG00673.hp1
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01255.hp1
HG01943.hp2
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02155.hp1
HG02293.hp1
HG02300.hp1
HG02451.hp1
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03195.hp2
HG03471.hp2
HG03486.hp2
HG03492.hp1
HG03579.hp2
HG03710.hp2
HG04115.hp2
HG04199.hp2
HG04204.hp1
HG04228.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19012.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19090.hp1
NA19091.hp1
NA20300.hp2
NA21309.hp2
 intron_variant MODIFIER c.36+1404C>T
c.36+1404C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84517799
chr1:84517971 C
C
 A
A
 27 a0001c0001t0001g0060
a0001c0003t0004g0002
a0001c0003t0004g0040
others(24): Show 
a0001c0001t0001g0060
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0009g0013
a0001c0006t0014g0061
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
 32 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(29): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG01192.hp2
HG01346.hp1
HG01943.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02293.hp2
HG02572.hp2
HG02622.hp1
HG02630.hp1
HG02717.hp2
HG02723.hp2
HG03130.hp2
HG03471.hp1
HG03516.hp1
HG03834.hp1
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19089.hp2
 intron_variant MODIFIER c.36+1576C>A
c.36+1576C>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84517971
chr1:84517972 A
A
 AT
AT
 27 a0001c0001t0001g0060
a0001c0003t0004g0002
a0001c0003t0004g0040
others(24): Show 
a0001c0001t0001g0060
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0009g0013
a0001c0006t0014g0061
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
 32 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(29): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG01192.hp2
HG01346.hp1
HG01943.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02293.hp2
HG02572.hp2
HG02622.hp1
HG02630.hp1
HG02717.hp2
HG02723.hp2
HG03130.hp2
HG03471.hp1
HG03516.hp1
HG03834.hp1
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19089.hp2
 intron_variant MODIFIER c.36+1577_36+1578ins
others(1): Show 
c.36+1577_36+1578insT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84517972
chr1:84517973 C
C
 A
A
 27 a0001c0001t0001g0060
a0001c0003t0004g0002
a0001c0003t0004g0040
others(24): Show 
a0001c0001t0001g0060
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0009g0013
a0001c0006t0014g0061
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
 32 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(29): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG01192.hp2
HG01346.hp1
HG01943.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02293.hp2
HG02572.hp2
HG02622.hp1
HG02630.hp1
HG02717.hp2
HG02723.hp2
HG03130.hp2
HG03471.hp1
HG03516.hp1
HG03834.hp1
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19089.hp2
 intron_variant MODIFIER c.36+1578C>A
c.36+1578C>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84517973
chr1:84517974 T
T
 A
A
 27 a0001c0001t0001g0060
a0001c0003t0004g0002
a0001c0003t0004g0040
others(24): Show 
a0001c0001t0001g0060
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0009g0013
a0001c0006t0014g0061
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
 32 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(29): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG01192.hp2
HG01346.hp1
HG01943.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02293.hp2
HG02572.hp2
HG02622.hp1
HG02630.hp1
HG02717.hp2
HG02723.hp2
HG03130.hp2
HG03471.hp1
HG03516.hp1
HG03834.hp1
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19089.hp2
 intron_variant MODIFIER c.36+1579T>A
c.36+1579T>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84517974
chr1:84518155 C
C
 T
T
 1 a0001c0001t0001g0176
a0001c0001t0001g0176
 1 HG00673.hp2
HG00673.hp2
 intron_variant MODIFIER c.36+1760C>T
c.36+1760C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84518155
chr1:84518206 A
A
 C
C
 1 a0001c0003t0004g0054
a0001c0003t0004g0054
 1 HG02148.hp2
HG02148.hp2
 intron_variant MODIFIER c.36+1811A>C
c.36+1811A>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84518206
chr1:84518220 C
C
 T
T
 1 a0005c0009t0012g0083
a0005c0009t0012g0083
 1 HG03669.hp1
HG03669.hp1
 intron_variant MODIFIER c.36+1825C>T
c.36+1825C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84518220
chr1:84518236 A
A
 G
G
 20 a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
others(17): Show 
a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
 22 HG00741.hp2
HG01168.hp2
HG01169.hp2
others(19): Show 
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02698.hp1
HG02818.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.36+1841A>G
c.36+1841A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84518236
chr1:84518349 T
T
 C
C
 2 a0001c0001t0001g0060
a0001c0006t0014g0061
a0001c0001t0001g0060
a0001c0006t0014g0061
 2 HG02723.hp2
HG03130.hp2
HG02723.hp2
HG03130.hp2
 intron_variant MODIFIER c.36+1954T>C
c.36+1954T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84518349
chr1:84518355 A
A
 T
T
 2 a0001c0001t0001g0220
a0001c0001t0001g0222
a0001c0001t0001g0220
a0001c0001t0001g0222
 2 NA18946.hp1
NA18954.hp1
NA18946.hp1
NA18954.hp1
 intron_variant MODIFIER c.36+1960A>T
c.36+1960A>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84518355
chr1:84518524 A
A
 C
C
 3 a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0076
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0076
 3 HG01361.hp2
HG01496.hp2
HG01975.hp1
HG01361.hp2
HG01496.hp2
HG01975.hp1
 intron_variant MODIFIER c.37-2061A>C
c.37-2061A>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84518524
chr1:84518893 T
T
 C
C
 4 a0001c0003t0011g0260
a0001c0003t0011g0261
a0002c0002t0003g0262
others(1): Show 
a0001c0003t0011g0260
a0001c0003t0011g0261
a0002c0002t0003g0262
a0002c0002t0003g0263
 4 HG01168.hp1
HG01993.hp1
NA18988.hp2
others(1): Show 
HG01168.hp1
HG01993.hp1
NA18988.hp2
NA19063.hp1
 intron_variant MODIFIER c.37-1692T>C
c.37-1692T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84518893
chr1:84518988 A
A
 G
G
 1 a0001c0001t0001g0156
a0001c0001t0001g0156
 1 HG02300.hp2
HG02300.hp2
 intron_variant MODIFIER c.37-1597A>G
c.37-1597A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84518988
chr1:84519009 G
G
 A
A
 64 a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
others(61): Show 
a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 73 HG00280.hp1
HG00408.hp1
HG00438.hp1
others(70): Show 
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00609.hp1
HG00621.hp2
HG00673.hp1
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01255.hp1
HG01943.hp2
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02155.hp1
HG02293.hp1
HG02300.hp1
HG02451.hp1
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03195.hp2
HG03471.hp2
HG03486.hp2
HG03492.hp1
HG03579.hp2
HG03710.hp2
HG04115.hp2
HG04199.hp2
HG04204.hp1
HG04228.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19012.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19090.hp1
NA19091.hp1
NA20300.hp2
NA21309.hp2
 intron_variant MODIFIER c.37-1576G>A
c.37-1576G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84519009
chr1:84519045 A
A
 G
G
 2 a0001c0001t0001g0219
a0001c0001t0001g0224
a0001c0001t0001g0219
a0001c0001t0001g0224
 2 HG03834.hp2
NA18994.hp2
HG03834.hp2
NA18994.hp2
 intron_variant MODIFIER c.37-1540A>G
c.37-1540A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84519045
chr1:84519490 C
C
 T
T
 135 a0001c0001t0001g0060
a0001c0001t0007g0017
a0001c0001t0007g0095
others(132): Show 
a0001c0001t0001g0060
a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 158 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(155): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01106.hp1
HG01109.hp2
HG01168.hp1
HG01168.hp2
HG01169.hp2
HG01192.hp2
HG01255.hp1
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01943.hp2
HG01975.hp1
HG01993.hp1
HG02015.hp1
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02145.hp1
HG02148.hp2
HG02155.hp1
HG02257.hp2
HG02258.hp1
HG02293.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03041.hp2
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04184.hp1
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18944.hp1
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18968.hp1
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18988.hp2
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19004.hp2
NA19012.hp1
NA19043.hp2
NA19054.hp1
NA19056.hp2
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19090.hp1
NA19091.hp1
NA19240.hp1
NA20300.hp2
NA20805.hp1
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.37-1095C>T
c.37-1095C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84519490
chr1:84519623 G
G
 A
A
 64 a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
others(61): Show 
a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 73 HG00280.hp1
HG00408.hp1
HG00438.hp1
others(70): Show 
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00609.hp1
HG00621.hp2
HG00673.hp1
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01255.hp1
HG01943.hp2
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02155.hp1
HG02293.hp1
HG02300.hp1
HG02451.hp1
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03195.hp2
HG03471.hp2
HG03486.hp2
HG03492.hp1
HG03579.hp2
HG03710.hp2
HG04115.hp2
HG04199.hp2
HG04204.hp1
HG04228.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19012.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19090.hp1
NA19091.hp1
NA20300.hp2
NA21309.hp2
 intron_variant MODIFIER c.37-962G>A
c.37-962G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84519623
chr1:84519628 G
G
 A
A
 1 a0005c0009t0012g0083
a0005c0009t0012g0083
 1 HG03669.hp1
HG03669.hp1
 intron_variant MODIFIER c.37-957G>A
c.37-957G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84519628
chr1:84520034 A
A
 G
G
 2 a0002c0002t0012g0082
a0005c0009t0012g0083
a0002c0002t0012g0082
a0005c0009t0012g0083
 2 HG03491.hp1
HG03669.hp1
HG03491.hp1
HG03669.hp1
 intron_variant MODIFIER c.37-551A>G
c.37-551A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84520034
chr1:84520062 C
C
 T
T
 64 a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
others(61): Show 
a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 73 HG00280.hp1
HG00408.hp1
HG00438.hp1
others(70): Show 
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00609.hp1
HG00621.hp2
HG00673.hp1
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01255.hp1
HG01943.hp2
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02155.hp1
HG02293.hp1
HG02300.hp1
HG02451.hp1
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03195.hp2
HG03471.hp2
HG03486.hp2
HG03492.hp1
HG03579.hp2
HG03710.hp2
HG04115.hp2
HG04199.hp2
HG04204.hp1
HG04228.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19012.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19090.hp1
NA19091.hp1
NA20300.hp2
NA21309.hp2
 intron_variant MODIFIER c.37-523C>T
c.37-523C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84520062
chr1:84520310 A
A
 G
G
 20 a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
others(17): Show 
a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
 22 HG00741.hp2
HG01168.hp2
HG01169.hp2
others(19): Show 
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02698.hp1
HG02818.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.37-275A>G
c.37-275A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84520310
chr1:84520356 C
C
 T
T
 64 a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
others(61): Show 
a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 73 HG00280.hp1
HG00408.hp1
HG00438.hp1
others(70): Show 
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00609.hp1
HG00621.hp2
HG00673.hp1
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01255.hp1
HG01943.hp2
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02155.hp1
HG02293.hp1
HG02300.hp1
HG02451.hp1
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03195.hp2
HG03471.hp2
HG03486.hp2
HG03492.hp1
HG03579.hp2
HG03710.hp2
HG04115.hp2
HG04199.hp2
HG04204.hp1
HG04228.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19012.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19090.hp1
NA19091.hp1
NA20300.hp2
NA21309.hp2
 intron_variant MODIFIER c.37-229C>T
c.37-229C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84520356
chr1:84520406 C
C
 A
A
 1 a0001c0003t0004g0040
a0001c0003t0004g0040
 1 HG02055.hp2
HG02055.hp2
 intron_variant MODIFIER c.37-179C>A
c.37-179C>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84520406
chr1:84520487 T
T
 C
C
 5 a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0151
others(2): Show 
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
 7 HG01070.hp1
HG01071.hp1
HG01081.hp1
others(4): Show 
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01167.hp1
HG01169.hp1
HG02572.hp1
NA19030.hp1
 intron_variant MODIFIER c.37-98T>C
c.37-98T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84520487
chr1:84520529 G
G
 C
C
 1 a0001c0001t0001g0166
a0001c0001t0001g0166
 1 NA18987.hp2
NA18987.hp2
 intron_variant MODIFIER c.37-56G>C
c.37-56G>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 chr1 84520529
chr1:84520530 AT
AT
 A
A
 264 a0001c0001t0001g0001
a0001c0001t0001g0003
a0001c0001t0001g0008
others(261): Show 
a0001c0001t0001g0001
a0001c0001t0001g0003
a0001c0001t0001g0008
a0001c0001t0001g0009
a0001c0001t0001g0025
a0001c0001t0001g0026
a0001c0001t0001g0060
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0163
a0001c0001t0001g0164
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0170
a0001c0001t0001g0171
a0001c0001t0001g0172
a0001c0001t0001g0173
a0001c0001t0001g0174
a0001c0001t0001g0175
a0001c0001t0001g0176
a0001c0001t0001g0177
a0001c0001t0001g0178
a0001c0001t0001g0179
a0001c0001t0001g0180
a0001c0001t0001g0181
a0001c0001t0001g0182
a0001c0001t0001g0183
a0001c0001t0001g0184
a0001c0001t0001g0185
a0001c0001t0001g0186
a0001c0001t0001g0187
a0001c0001t0001g0188
a0001c0001t0001g0189
a0001c0001t0001g0190
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0204
a0001c0001t0001g0205
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0213
a0001c0001t0001g0214
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0001g0219
a0001c0001t0001g0220
a0001c0001t0001g0221
a0001c0001t0001g0222
a0001c0001t0001g0223
a0001c0001t0001g0224
a0001c0001t0001g0225
a0001c0001t0001g0226
a0001c0001t0001g0227
a0001c0001t0001g0228
a0001c0001t0001g0230
a0001c0001t0001g0231
a0001c0001t0001g0232
a0001c0001t0001g0233
a0001c0001t0001g0234
a0001c0001t0001g0235
a0001c0001t0001g0236
a0001c0001t0001g0237
a0001c0001t0001g0238
a0001c0001t0001g0239
a0001c0001t0001g0240
a0001c0001t0001g0241
a0001c0001t0001g0243
a0001c0001t0001g0244
a0001c0001t0001g0245
a0001c0001t0001g0246
a0001c0001t0001g0247
a0001c0001t0001g0248
a0001c0001t0001g0249
a0001c0001t0001g0250
a0001c0001t0001g0251
a0001c0001t0001g0252
a0001c0001t0001g0253
a0001c0001t0001g0254
a0001c0001t0001g0256
a0001c0001t0001g0257
a0001c0001t0001g0258
a0001c0001t0001g0259
a0001c0001t0001g0264
a0001c0001t0001g0265
a0001c0001t0001g0266
a0001c0001t0001g0267
a0001c0001t0001g0268
a0001c0001t0001g0269
a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
a0001c0001t0009g0229
a0001c0001t0013g0165
a0001c0003t0001g0075
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
a0007c0008t0001g0242
 307 HG00140.hp1
HG00140.hp2
HG00280.hp1
others(304): Show 
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00408.hp1
HG00408.hp2
HG00438.hp1
HG00438.hp2
HG00544.hp1
HG00544.hp2
HG00597.hp1
HG00597.hp2
HG00609.hp1
HG00609.hp2
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00673.hp2
HG00735.hp1
HG00735.hp2
HG00738.hp1
HG00738.hp2
HG00741.hp1
HG00741.hp2
HG01070.hp1
HG01070.hp2
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01099.hp2
HG01106.hp1
HG01106.hp2
HG01109.hp1
HG01109.hp2
HG01167.hp1
HG01167.hp2
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp1
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01261.hp1
HG01261.hp2
HG01346.hp1
HG01346.hp2
HG01361.hp1
HG01361.hp2
HG01496.hp1
HG01496.hp2
HG01515.hp1
HG01515.hp2
HG01517.hp1
HG01517.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01943.hp2
HG01975.hp1
HG01975.hp2
HG01993.hp2
HG02015.hp1
HG02015.hp2
HG02040.hp1
HG02040.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02080.hp2
HG02083.hp1
HG02083.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02148.hp2
HG02155.hp1
HG02155.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02280.hp2
HG02293.hp1
HG02293.hp2
HG02300.hp1
HG02300.hp2
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02647.hp2
HG02698.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp1
HG02735.hp2
HG02738.hp1
HG02738.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG02976.hp1
HG02976.hp2
HG03017.hp1
HG03017.hp2
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03130.hp2
HG03139.hp1
HG03139.hp2
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03492.hp2
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03669.hp1
HG03669.hp2
HG03710.hp1
HG03710.hp2
HG03834.hp1
HG03834.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04204.hp2
HG04228.hp1
HG04228.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18612.hp1
NA18612.hp2
NA18747.hp1
NA18747.hp2
NA18940.hp1
NA18940.hp2
NA18942.hp1
NA18942.hp2
NA18944.hp1
NA18944.hp2
NA18945.hp1
NA18945.hp2
NA18946.hp1
NA18946.hp2
NA18948.hp1
NA18948.hp2
NA18950.hp1
NA18950.hp2
NA18951.hp1
NA18951.hp2
NA18952.hp1
NA18952.hp2
NA18954.hp1
NA18954.hp2
NA18955.hp1
NA18955.hp2
NA18957.hp1
NA18957.hp2
NA18961.hp1
NA18961.hp2
NA18962.hp1
NA18962.hp2
NA18965.hp1
NA18965.hp2
NA18967.hp1
NA18967.hp2
NA18968.hp1
NA18968.hp2
NA18969.hp1
NA18969.hp2
NA18971.hp1
NA18971.hp2
NA18975.hp1
NA18975.hp2
NA18979.hp1
NA18979.hp2
NA18980.hp1
NA18980.hp2
NA18983.hp1
NA18983.hp2
NA18986.hp1
NA18986.hp2
NA18987.hp1
NA18987.hp2
NA18988.hp1
NA18989.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18992.hp2
NA18994.hp1
NA18994.hp2
NA19004.hp1
NA19004.hp2
NA19007.hp1
NA19007.hp2
NA19012.hp1
NA19012.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19054.hp2
NA19056.hp1
NA19056.hp2
NA19057.hp1
NA19057.hp2
NA19058.hp1
NA19058.hp2
NA19063.hp2
NA19065.hp1
NA19065.hp2
NA19066.hp1
NA19066.hp2
NA19068.hp1
NA19068.hp2
NA19072.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19075.hp2
NA19077.hp1
NA19077.hp2
NA19079.hp1
NA19079.hp2
NA19083.hp1
NA19083.hp2
NA19084.hp1
NA19084.hp2
NA19089.hp1
NA19089.hp2
NA19090.hp1
NA19090.hp2
NA19091.hp1
NA19091.hp2
NA19240.hp1
NA19240.hp2
NA20300.hp1
NA20300.hp2
NA20805.hp1
NA20805.hp2
NA21309.hp1
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.37-45delT
c.37-45delT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 2/13 INFO_REALIGN_3_PRIME chr1 84520530
chr1:84520729 G
G
 T
T
 20 a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
others(17): Show 
a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
 22 HG00741.hp2
HG01168.hp2
HG01169.hp2
others(19): Show 
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02698.hp1
HG02818.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.143+38G>T
c.143+38G>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 3/13 chr1 84520729
chr1:84520802 C
C
 G
G
 1 a0001c0001t0001g0218
a0001c0001t0001g0218
 1 NA19083.hp1
NA19083.hp1
 intron_variant MODIFIER c.143+111C>G
c.143+111C>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 3/13 chr1 84520802
chr1:84521186 C
C
 T
T
 9 a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
others(6): Show 
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
 10 HG01109.hp1
HG01261.hp1
HG01515.hp2
others(7): Show 
HG01109.hp1
HG01261.hp1
HG01515.hp2
HG01517.hp1
HG02040.hp2
HG02809.hp2
HG03017.hp2
HG03130.hp1
NA19043.hp1
NA19240.hp2
 intron_variant MODIFIER c.143+495C>T
c.143+495C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 3/13 chr1 84521186
chr1:84521191 G
G
 A
A
 1 a0002c0002t0003g0132
a0002c0002t0003g0132
 1 HG01106.hp1
HG01106.hp1
 intron_variant MODIFIER c.143+500G>A
c.143+500G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 3/13 chr1 84521191
chr1:84521205 G
G
 C
C
 1 a0002c0002t0003g0141
a0002c0002t0003g0141
 1 NA18980.hp1
NA18980.hp1
 intron_variant MODIFIER c.143+514G>C
c.143+514G>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 3/13 chr1 84521205
chr1:84521231 G
G
 A
A
 64 a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
others(61): Show 
a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 73 HG00280.hp1
HG00408.hp1
HG00438.hp1
others(70): Show 
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00609.hp1
HG00621.hp2
HG00673.hp1
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01255.hp1
HG01943.hp2
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02155.hp1
HG02293.hp1
HG02300.hp1
HG02451.hp1
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03195.hp2
HG03471.hp2
HG03486.hp2
HG03492.hp1
HG03579.hp2
HG03710.hp2
HG04115.hp2
HG04199.hp2
HG04204.hp1
HG04228.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19012.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19090.hp1
NA19091.hp1
NA20300.hp2
NA21309.hp2
 intron_variant MODIFIER c.143+540G>A
c.143+540G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 3/13 chr1 84521231
chr1:84521379 T
T
 C
C
 154 a0001c0001t0001g0060
a0001c0001t0007g0017
a0001c0001t0007g0095
others(151): Show 
a0001c0001t0001g0060
a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
a0001c0001t0013g0165
a0001c0003t0001g0075
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 181 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(178): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01192.hp2
HG01255.hp1
HG01261.hp1
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01515.hp2
HG01517.hp1
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01943.hp2
HG01975.hp1
HG01993.hp1
HG02015.hp1
HG02040.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp2
HG02155.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02293.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp2
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03453.hp1
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04184.hp1
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18944.hp1
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18968.hp1
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18988.hp2
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19004.hp2
NA19012.hp1
NA19030.hp1
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19056.hp2
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19090.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
NA20805.hp1
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.143+688T>C
c.143+688T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 3/13 chr1 84521379
chr1:84521385 C
C
 T
T
 3 a0001c0001t0001g0157
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0157
a0001c0001t0001g0216
a0001c0001t0001g0217
 3 NA18967.hp1
NA18983.hp2
NA19007.hp2
NA18967.hp1
NA18983.hp2
NA19007.hp2
 intron_variant MODIFIER c.143+694C>T
c.143+694C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 3/13 chr1 84521385
chr1:84521458 T
T
 C
C
 20 a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
others(17): Show 
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0002c0002t0012g0082
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 27 HG00639.hp2
HG01891.hp2
HG02055.hp1
others(24): Show 
HG00639.hp2
HG01891.hp2
HG02055.hp1
HG02257.hp2
HG02258.hp1
HG02451.hp2
HG02486.hp1
HG02622.hp2
HG02630.hp2
HG02647.hp1
HG02723.hp1
HG02818.hp1
HG02895.hp1
HG02922.hp1
HG02965.hp2
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03486.hp1
HG03491.hp1
HG03669.hp1
HG06807.hp2
NA18522.hp2
NA19240.hp1
 intron_variant MODIFIER c.143+767T>C
c.143+767T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 3/13 chr1 84521458
chr1:84521522 C
C
 G
G
 1 a0001c0001t0001g0164
a0001c0001t0001g0164
 1 NA19068.hp2
NA19068.hp2
 intron_variant MODIFIER c.143+831C>G
c.143+831C>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 3/13 chr1 84521522
chr1:84521778 C
C
 G
G
 1 a0001c0001t0001g0179
a0001c0001t0001g0179
 1 HG01515.hp1
HG01515.hp1
 intron_variant MODIFIER c.144-612C>G
c.144-612C>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 3/13 chr1 84521778
chr1:84522055 A
A
 G
G
 16 a0001c0003t0004g0002
a0001c0003t0004g0041
a0001c0003t0004g0042
others(13): Show 
a0001c0003t0004g0002
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0009g0013
 21 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(18): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG01192.hp2
HG01346.hp1
HG01943.hp1
HG02148.hp2
HG02293.hp2
HG03834.hp1
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18989.hp2
NA19004.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19089.hp2
 intron_variant MODIFIER c.144-335A>G
c.144-335A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 3/13 chr1 84522055
chr1:84522124 G
G
 A
A
 1 a0002c0002t0003g0149
a0002c0002t0003g0149
 1 HG03710.hp2
HG03710.hp2
 intron_variant MODIFIER c.144-266G>A
c.144-266G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 3/13 chr1 84522124
chr1:84522289 T
T
 TCAA
TCAA
 9 a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
others(6): Show 
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
 12 HG01070.hp1
HG01071.hp1
HG01081.hp1
others(9): Show 
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01167.hp1
HG01169.hp1
HG02145.hp2
HG02258.hp2
HG02280.hp1
HG02572.hp1
HG03041.hp1
NA19030.hp1
 intron_variant MODIFIER c.144-99_144-97dupAA
others(1): Show 
c.144-99_144-97dupAAC
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 3/13 INFO_REALIGN_3_PRIME chr1 84522289
chr1:84522329 T
T
 C
C
 1 a0001c0001t0001g0185
a0001c0001t0001g0185
 1 HG00642.hp1
HG00642.hp1
 intron_variant MODIFIER c.144-61T>C
c.144-61T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 3/13 chr1 84522329
chr1:84522593 T
T
 A
A
 1 a0002c0002t0003g0103
a0002c0002t0003g0103
 1 HG03579.hp2
HG03579.hp2
 intron_variant MODIFIER c.261+86T>A
c.261+86T>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 4/13 chr1 84522593
chr1:84522607 G
G
 A
A
 4 a0001c0003t0011g0260
a0001c0003t0011g0261
a0002c0002t0003g0262
others(1): Show 
a0001c0003t0011g0260
a0001c0003t0011g0261
a0002c0002t0003g0262
a0002c0002t0003g0263
 4 HG01168.hp1
HG01993.hp1
NA18988.hp2
others(1): Show 
HG01168.hp1
HG01993.hp1
NA18988.hp2
NA19063.hp1
 intron_variant MODIFIER c.261+100G>A
c.261+100G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 4/13 chr1 84522607
chr1:84522831 G
G
 A
A
 4 a0002c0002t0003g0128
a0002c0002t0007g0100
a0002c0002t0007g0129
others(1): Show 
a0002c0002t0003g0128
a0002c0002t0007g0100
a0002c0002t0007g0129
a0002c0002t0007g0130
 4 HG00408.hp1
NA18954.hp2
NA18962.hp1
others(1): Show 
HG00408.hp1
NA18954.hp2
NA18962.hp1
NA18986.hp2
 intron_variant MODIFIER c.261+324G>A
c.261+324G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 4/13 chr1 84522831
chr1:84522911 CT
CT
 C
C
 66 a0001c0001t0001g0236
a0001c0001t0001g0237
a0001c0001t0007g0017
others(63): Show 
a0001c0001t0001g0236
a0001c0001t0001g0237
a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 75 HG00280.hp1
HG00408.hp1
HG00438.hp1
others(72): Show 
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00609.hp1
HG00621.hp2
HG00673.hp1
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01255.hp1
HG01943.hp2
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp1
HG02132.hp2
HG02155.hp1
HG02293.hp1
HG02300.hp1
HG02451.hp1
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03195.hp2
HG03471.hp2
HG03486.hp2
HG03492.hp1
HG03579.hp2
HG03669.hp2
HG03710.hp2
HG04115.hp2
HG04199.hp2
HG04204.hp1
HG04228.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19012.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19090.hp1
NA19091.hp1
NA20300.hp2
NA21309.hp2
 intron_variant MODIFIER c.261+419delT
c.261+419delT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 4/13 INFO_REALIGN_3_PRIME chr1 84522911
chr1:84522926 T
T
 C
C
 10 a0001c0001t0001g0235
a0002c0002t0005g0022
a0002c0002t0005g0023
others(7): Show 
a0001c0001t0001g0235
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
 13 HG01070.hp1
HG01071.hp1
HG01081.hp1
others(10): Show 
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01167.hp1
HG01169.hp1
HG01192.hp1
HG02145.hp2
HG02258.hp2
HG02280.hp1
HG02572.hp1
HG03041.hp1
NA19030.hp1
 intron_variant MODIFIER c.261+419T>C
c.261+419T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 4/13 chr1 84522926
chr1:84523120 G
G
 T
T
 15 a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
others(12): Show 
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0006c0007t0001g0035
 20 HG00639.hp2
HG01891.hp2
HG02055.hp1
others(17): Show 
HG00639.hp2
HG01891.hp2
HG02055.hp1
HG02257.hp2
HG02451.hp2
HG02486.hp1
HG02622.hp2
HG02647.hp1
HG02723.hp1
HG02818.hp1
HG02922.hp1
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp2
HG03225.hp2
HG03486.hp1
HG06807.hp2
NA18522.hp2
NA19240.hp1
 intron_variant MODIFIER c.261+613G>T
c.261+613G>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 4/13 chr1 84523120
chr1:84523143 G
G
 C
C
 5 a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
others(2): Show 
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0002c0002t0012g0082
a0005c0009t0012g0083
 7 HG02258.hp1
HG02630.hp2
HG02895.hp1
others(4): Show 
HG02258.hp1
HG02630.hp2
HG02895.hp1
HG02965.hp2
HG03225.hp1
HG03491.hp1
HG03669.hp1
 intron_variant MODIFIER c.261+636G>C
c.261+636G>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 4/13 chr1 84523143
chr1:84523329 G
G
 T
T
 64 a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
others(61): Show 
a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 73 HG00280.hp1
HG00408.hp1
HG00438.hp1
others(70): Show 
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00609.hp1
HG00621.hp2
HG00673.hp1
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01255.hp1
HG01943.hp2
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02155.hp1
HG02293.hp1
HG02300.hp1
HG02451.hp1
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03195.hp2
HG03471.hp2
HG03486.hp2
HG03492.hp1
HG03579.hp2
HG03710.hp2
HG04115.hp2
HG04199.hp2
HG04204.hp1
HG04228.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19012.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19090.hp1
NA19091.hp1
NA20300.hp2
NA21309.hp2
 intron_variant MODIFIER c.261+822G>T
c.261+822G>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 4/13 chr1 84523329
chr1:84523395 T
T
 C
C
 1 a0001c0001t0001g0186
a0001c0001t0001g0186
 1 HG02717.hp1
HG02717.hp1
 intron_variant MODIFIER c.261+888T>C
c.261+888T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 4/13 chr1 84523395
chr1:84523442 T
T
 A
A
 1 a0004c0005t0001g0029
a0004c0005t0001g0029
 1 HG06807.hp2
HG06807.hp2
 intron_variant MODIFIER c.261+935T>A
c.261+935T>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 4/13 chr1 84523442
chr1:84523637 C
C
 T
T
 20 a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
others(17): Show 
a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
 22 HG00741.hp2
HG01168.hp2
HG01169.hp2
others(19): Show 
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02698.hp1
HG02818.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.261+1130C>T
c.261+1130C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 4/13 chr1 84523637
chr1:84524369 T
T
 C
C
 4 a0001c0003t0011g0260
a0001c0003t0011g0261
a0002c0002t0003g0262
others(1): Show 
a0001c0003t0011g0260
a0001c0003t0011g0261
a0002c0002t0003g0262
a0002c0002t0003g0263
 4 HG01168.hp1
HG01993.hp1
NA18988.hp2
others(1): Show 
HG01168.hp1
HG01993.hp1
NA18988.hp2
NA19063.hp1
 intron_variant MODIFIER c.262-1327T>C
c.262-1327T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 4/13 chr1 84524369
chr1:84524476 A
A
 C
C
 20 a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
others(17): Show 
a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
 22 HG00741.hp2
HG01168.hp2
HG01169.hp2
others(19): Show 
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02698.hp1
HG02818.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.262-1220A>C
c.262-1220A>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 4/13 chr1 84524476
chr1:84524560 T
T
 C
C
 15 a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
others(12): Show 
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0006c0007t0001g0035
 20 HG00639.hp2
HG01891.hp2
HG02055.hp1
others(17): Show 
HG00639.hp2
HG01891.hp2
HG02055.hp1
HG02257.hp2
HG02451.hp2
HG02486.hp1
HG02622.hp2
HG02647.hp1
HG02723.hp1
HG02818.hp1
HG02922.hp1
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp2
HG03225.hp2
HG03486.hp1
HG06807.hp2
NA18522.hp2
NA19240.hp1
 intron_variant MODIFIER c.262-1136T>C
c.262-1136T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 4/13 chr1 84524560
chr1:84524566 C
C
 T
T
 1 a0001c0003t0001g0075
a0001c0003t0001g0075
 1 HG02922.hp2
HG02922.hp2
 intron_variant MODIFIER c.262-1130C>T
c.262-1130C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 4/13 chr1 84524566
chr1:84524690 T
T
 G
G
 2 a0001c0001t0001g0060
a0001c0006t0014g0061
a0001c0001t0001g0060
a0001c0006t0014g0061
 2 HG02723.hp2
HG03130.hp2
HG02723.hp2
HG03130.hp2
 intron_variant MODIFIER c.262-1006T>G
c.262-1006T>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 4/13 chr1 84524690
chr1:84524967 G
G
 GTGTTT
GTGTTT
 18 a0001c0001t0001g0266
a0001c0001t0001g0269
a0001c0001t0007g0095
others(15): Show 
a0001c0001t0001g0266
a0001c0001t0001g0269
a0001c0001t0007g0095
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0006c0007t0001g0035
 23 HG00639.hp2
HG01891.hp2
HG02055.hp1
others(20): Show 
HG00639.hp2
HG01891.hp2
HG02055.hp1
HG02257.hp2
HG02451.hp2
HG02486.hp1
HG02622.hp2
HG02647.hp1
HG02723.hp1
HG02818.hp1
HG02922.hp1
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp2
HG03225.hp2
HG03471.hp2
HG03486.hp1
HG06807.hp2
NA18522.hp2
NA18975.hp1
NA19066.hp2
NA19240.hp1
 intron_variant MODIFIER c.262-707_262-703dup
others(5): Show 
c.262-707_262-703dupGTTTT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 4/13 INFO_REALIGN_3_PRIME chr1 84524967
chr1:84525173 G
G
 C
C
 1 a0004c0005t0001g0005
a0004c0005t0001g0005
 3 HG02922.hp1
HG03195.hp1
NA18522.hp2
HG02922.hp1
HG03195.hp1
NA18522.hp2
 intron_variant MODIFIER c.262-523G>C
c.262-523G>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 4/13 chr1 84525173
chr1:84525203 G
G
 A
A
 1 a0002c0002t0003g0133
a0002c0002t0003g0133
 1 HG00280.hp1
HG00280.hp1
 intron_variant MODIFIER c.262-493G>A
c.262-493G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 4/13 chr1 84525203
chr1:84525227 G
G
 A
A
 266 a0001c0001t0001g0001
a0001c0001t0001g0003
a0001c0001t0001g0008
others(263): Show 
a0001c0001t0001g0001
a0001c0001t0001g0003
a0001c0001t0001g0008
a0001c0001t0001g0009
a0001c0001t0001g0025
a0001c0001t0001g0026
a0001c0001t0001g0060
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0163
a0001c0001t0001g0164
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0170
a0001c0001t0001g0171
a0001c0001t0001g0172
a0001c0001t0001g0173
a0001c0001t0001g0174
a0001c0001t0001g0175
a0001c0001t0001g0176
a0001c0001t0001g0177
a0001c0001t0001g0178
a0001c0001t0001g0179
a0001c0001t0001g0180
a0001c0001t0001g0181
a0001c0001t0001g0182
a0001c0001t0001g0183
a0001c0001t0001g0184
a0001c0001t0001g0185
a0001c0001t0001g0186
a0001c0001t0001g0187
a0001c0001t0001g0188
a0001c0001t0001g0189
a0001c0001t0001g0190
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0204
a0001c0001t0001g0205
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0213
a0001c0001t0001g0214
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0001g0219
a0001c0001t0001g0220
a0001c0001t0001g0221
a0001c0001t0001g0222
a0001c0001t0001g0223
a0001c0001t0001g0224
a0001c0001t0001g0225
a0001c0001t0001g0226
a0001c0001t0001g0227
a0001c0001t0001g0228
a0001c0001t0001g0230
a0001c0001t0001g0231
a0001c0001t0001g0232
a0001c0001t0001g0233
a0001c0001t0001g0234
a0001c0001t0001g0235
a0001c0001t0001g0236
a0001c0001t0001g0237
a0001c0001t0001g0238
a0001c0001t0001g0239
a0001c0001t0001g0240
a0001c0001t0001g0241
a0001c0001t0001g0243
a0001c0001t0001g0244
a0001c0001t0001g0245
a0001c0001t0001g0246
a0001c0001t0001g0247
a0001c0001t0001g0248
a0001c0001t0001g0249
a0001c0001t0001g0250
a0001c0001t0001g0251
a0001c0001t0001g0252
a0001c0001t0001g0256
a0001c0001t0001g0257
a0001c0001t0001g0258
a0001c0001t0001g0259
a0001c0001t0001g0264
a0001c0001t0001g0265
a0001c0001t0001g0266
a0001c0001t0001g0267
a0001c0001t0001g0268
a0001c0001t0001g0269
a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
a0001c0001t0009g0229
a0001c0001t0013g0165
a0001c0003t0001g0075
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
a0007c0008t0001g0242
 309 HG00140.hp1
HG00140.hp2
HG00280.hp1
others(306): Show 
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00408.hp1
HG00408.hp2
HG00438.hp1
HG00438.hp2
HG00544.hp1
HG00544.hp2
HG00597.hp1
HG00597.hp2
HG00609.hp1
HG00609.hp2
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00673.hp2
HG00735.hp1
HG00735.hp2
HG00738.hp1
HG00738.hp2
HG00741.hp1
HG00741.hp2
HG01070.hp1
HG01070.hp2
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01099.hp2
HG01106.hp1
HG01106.hp2
HG01109.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp1
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01261.hp1
HG01261.hp2
HG01346.hp1
HG01346.hp2
HG01361.hp1
HG01361.hp2
HG01496.hp1
HG01496.hp2
HG01515.hp1
HG01515.hp2
HG01517.hp1
HG01517.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01943.hp2
HG01975.hp1
HG01975.hp2
HG01993.hp1
HG01993.hp2
HG02015.hp1
HG02015.hp2
HG02040.hp1
HG02040.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02080.hp2
HG02083.hp1
HG02083.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02148.hp2
HG02155.hp1
HG02155.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02280.hp2
HG02293.hp1
HG02293.hp2
HG02300.hp1
HG02300.hp2
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02647.hp2
HG02698.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp1
HG02735.hp2
HG02738.hp1
HG02738.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG02976.hp1
HG02976.hp2
HG03017.hp1
HG03017.hp2
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03471.hp2
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03492.hp2
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03669.hp1
HG03669.hp2
HG03710.hp1
HG03710.hp2
HG03834.hp1
HG03834.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04204.hp2
HG04228.hp1
HG04228.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18612.hp1
NA18612.hp2
NA18747.hp1
NA18747.hp2
NA18940.hp1
NA18940.hp2
NA18942.hp1
NA18942.hp2
NA18944.hp1
NA18944.hp2
NA18945.hp1
NA18945.hp2
NA18946.hp1
NA18946.hp2
NA18948.hp1
NA18948.hp2
NA18950.hp1
NA18950.hp2
NA18951.hp1
NA18951.hp2
NA18952.hp1
NA18952.hp2
NA18954.hp1
NA18954.hp2
NA18955.hp1
NA18955.hp2
NA18957.hp1
NA18957.hp2
NA18961.hp1
NA18961.hp2
NA18962.hp1
NA18962.hp2
NA18965.hp1
NA18965.hp2
NA18967.hp1
NA18967.hp2
NA18968.hp1
NA18968.hp2
NA18969.hp1
NA18969.hp2
NA18971.hp1
NA18971.hp2
NA18975.hp1
NA18975.hp2
NA18979.hp1
NA18979.hp2
NA18980.hp1
NA18980.hp2
NA18983.hp1
NA18983.hp2
NA18986.hp1
NA18986.hp2
NA18987.hp1
NA18987.hp2
NA18988.hp1
NA18988.hp2
NA18989.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18992.hp2
NA18994.hp1
NA18994.hp2
NA19004.hp1
NA19004.hp2
NA19007.hp1
NA19007.hp2
NA19012.hp1
NA19012.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19054.hp2
NA19056.hp1
NA19056.hp2
NA19057.hp1
NA19057.hp2
NA19058.hp1
NA19058.hp2
NA19063.hp1
NA19063.hp2
NA19065.hp1
NA19065.hp2
NA19066.hp1
NA19066.hp2
NA19068.hp1
NA19068.hp2
NA19072.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19075.hp2
NA19077.hp1
NA19077.hp2
NA19079.hp1
NA19079.hp2
NA19083.hp1
NA19083.hp2
NA19084.hp1
NA19084.hp2
NA19089.hp1
NA19089.hp2
NA19090.hp1
NA19090.hp2
NA19091.hp1
NA19091.hp2
NA19240.hp1
NA19240.hp2
NA20300.hp1
NA20300.hp2
NA20805.hp1
NA20805.hp2
NA21309.hp1
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.262-469G>A
c.262-469G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 4/13 chr1 84525227
chr1:84525426 G
G
 A
A
 4 a0001c0003t0011g0260
a0001c0003t0011g0261
a0002c0002t0003g0262
others(1): Show 
a0001c0003t0011g0260
a0001c0003t0011g0261
a0002c0002t0003g0262
a0002c0002t0003g0263
 4 HG01168.hp1
HG01993.hp1
NA18988.hp2
others(1): Show 
HG01168.hp1
HG01993.hp1
NA18988.hp2
NA19063.hp1
 intron_variant MODIFIER c.262-270G>A
c.262-270G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 4/13 chr1 84525426
chr1:84525805 T
T
 G
G
 64 a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
others(61): Show 
a0001c0001t0007g0017
a0001c0001t0007g0095
a0001c0001t0007g0127
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 73 HG00280.hp1
HG00408.hp1
HG00438.hp1
others(70): Show 
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00609.hp1
HG00621.hp2
HG00673.hp1
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01255.hp1
HG01943.hp2
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02155.hp1
HG02293.hp1
HG02300.hp1
HG02451.hp1
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03195.hp2
HG03471.hp2
HG03486.hp2
HG03492.hp1
HG03579.hp2
HG03710.hp2
HG04115.hp2
HG04199.hp2
HG04204.hp1
HG04228.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19012.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19090.hp1
NA19091.hp1
NA20300.hp2
NA21309.hp2
 intron_variant MODIFIER c.316-40T>G
c.316-40T>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 5/13 chr1 84525805
chr1:84526427 G
G
 A
A
 182 a0001c0001t0001g0001
a0001c0001t0001g0025
a0001c0001t0001g0060
others(179): Show 
a0001c0001t0001g0001
a0001c0001t0001g0025
a0001c0001t0001g0060
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0163
a0001c0001t0001g0164
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0170
a0001c0001t0001g0171
a0001c0001t0001g0175
a0001c0001t0001g0176
a0001c0001t0001g0177
a0001c0001t0001g0178
a0001c0001t0001g0179
a0001c0001t0001g0180
a0001c0001t0001g0181
a0001c0001t0001g0182
a0001c0001t0001g0183
a0001c0001t0001g0184
a0001c0001t0001g0185
a0001c0001t0001g0186
a0001c0001t0001g0187
a0001c0001t0001g0188
a0001c0001t0001g0189
a0001c0001t0001g0190
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0204
a0001c0001t0001g0205
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0213
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0001g0219
a0001c0001t0001g0220
a0001c0001t0001g0221
a0001c0001t0001g0222
a0001c0001t0001g0223
a0001c0001t0001g0224
a0001c0001t0001g0226
a0001c0001t0001g0227
a0001c0001t0001g0228
a0001c0001t0001g0236
a0001c0001t0001g0238
a0001c0001t0001g0239
a0001c0001t0001g0251
a0001c0001t0001g0256
a0001c0001t0001g0257
a0001c0001t0001g0258
a0001c0001t0001g0259
a0001c0001t0001g0266
a0001c0001t0001g0267
a0001c0001t0001g0268
a0001c0001t0001g0269
a0001c0001t0007g0017
a0001c0001t0007g0127
a0001c0001t0009g0229
a0001c0001t0013g0165
a0001c0003t0001g0075
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0104
a0002c0002t0003g0128
a0002c0002t0003g0146
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0037
 209 HG00140.hp1
HG00140.hp2
HG00280.hp2
others(206): Show 
HG00140.hp1
HG00140.hp2
HG00280.hp2
HG00408.hp1
HG00408.hp2
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp2
HG00621.hp1
HG00639.hp1
HG00642.hp1
HG00673.hp1
HG00673.hp2
HG00735.hp2
HG00738.hp1
HG00738.hp2
HG00741.hp2
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01106.hp2
HG01109.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01175.hp2
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01261.hp1
HG01261.hp2
HG01346.hp1
HG01346.hp2
HG01361.hp1
HG01496.hp1
HG01515.hp1
HG01515.hp2
HG01517.hp1
HG01891.hp1
HG01943.hp1
HG01943.hp2
HG01993.hp2
HG02015.hp1
HG02015.hp2
HG02040.hp1
HG02040.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02132.hp2
HG02145.hp2
HG02148.hp1
HG02148.hp2
HG02155.hp1
HG02155.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02280.hp2
HG02293.hp1
HG02293.hp2
HG02486.hp1
HG02486.hp2
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02630.hp1
HG02630.hp2
HG02647.hp2
HG02698.hp1
HG02717.hp1
HG02717.hp2
HG02723.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp2
HG02886.hp1
HG02895.hp2
HG02897.hp1
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG03017.hp1
HG03017.hp2
HG03041.hp1
HG03130.hp1
HG03130.hp2
HG03139.hp1
HG03195.hp2
HG03209.hp1
HG03225.hp1
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03491.hp2
HG03492.hp2
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03834.hp1
HG03834.hp2
HG04199.hp1
HG04204.hp1
HG04204.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18612.hp1
NA18612.hp2
NA18747.hp1
NA18747.hp2
NA18940.hp1
NA18940.hp2
NA18942.hp2
NA18944.hp1
NA18944.hp2
NA18946.hp1
NA18946.hp2
NA18948.hp1
NA18948.hp2
NA18950.hp1
NA18951.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp1
NA18954.hp2
NA18955.hp1
NA18955.hp2
NA18957.hp1
NA18957.hp2
NA18961.hp1
NA18961.hp2
NA18962.hp1
NA18962.hp2
NA18965.hp1
NA18965.hp2
NA18967.hp1
NA18967.hp2
NA18969.hp2
NA18971.hp1
NA18975.hp1
NA18975.hp2
NA18979.hp1
NA18979.hp2
NA18980.hp2
NA18983.hp2
NA18986.hp2
NA18987.hp1
NA18987.hp2
NA18988.hp1
NA18988.hp2
NA18989.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18994.hp2
NA19004.hp1
NA19007.hp2
NA19012.hp1
NA19012.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19054.hp2
NA19056.hp1
NA19056.hp2
NA19057.hp1
NA19058.hp1
NA19063.hp1
NA19063.hp2
NA19065.hp1
NA19066.hp2
NA19068.hp2
NA19072.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19075.hp2
NA19077.hp2
NA19079.hp1
NA19083.hp1
NA19083.hp2
NA19084.hp1
NA19084.hp2
NA19089.hp1
NA19089.hp2
NA19090.hp2
NA19091.hp1
NA19240.hp2
NA20805.hp1
NA21309.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.544+354G>A
c.544+354G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84526427
chr1:84526754 G
G
 A
A
 2 a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0003t0011g0260
a0001c0003t0011g0261
 2 NA18988.hp2
NA19063.hp1
NA18988.hp2
NA19063.hp1
 intron_variant MODIFIER c.544+681G>A
c.544+681G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84526754
chr1:84526797 C
C
 A
A
 4 a0001c0001t0001g0266
a0001c0001t0001g0267
a0001c0001t0001g0268
others(1): Show 
a0001c0001t0001g0266
a0001c0001t0001g0267
a0001c0001t0001g0268
a0001c0001t0001g0269
 4 HG00609.hp2
NA18975.hp1
NA19065.hp1
others(1): Show 
HG00609.hp2
NA18975.hp1
NA19065.hp1
NA19066.hp2
 intron_variant MODIFIER c.544+724C>A
c.544+724C>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84526797
chr1:84526843 G
G
 T
T
 1 a0001c0001t0001g0173
a0001c0001t0001g0173
 1 HG02257.hp1
HG02257.hp1
 intron_variant MODIFIER c.544+770G>T
c.544+770G>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84526843
chr1:84526867 C
C
 CA
CA
 10 a0001c0001t0001g0168
a0001c0001t0001g0178
a0001c0001t0001g0187
others(7): Show 
a0001c0001t0001g0168
a0001c0001t0001g0178
a0001c0001t0001g0187
a0001c0001t0001g0188
a0001c0001t0001g0189
a0001c0001t0001g0226
a0001c0001t0001g0227
a0001c0001t0001g0264
a0002c0002t0002g0085
a0002c0002t0006g0084
 10 HG00438.hp1
HG00438.hp2
HG01106.hp2
others(7): Show 
HG00438.hp1
HG00438.hp2
HG01106.hp2
HG01175.hp2
HG02486.hp2
HG02630.hp1
HG03453.hp2
HG03579.hp1
NA19030.hp2
NA19075.hp2
 intron_variant MODIFIER c.544+815dupA
c.544+815dupA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 INFO_REALIGN_3_PRIME chr1 84526867
chr1:84526867 CA
CA
 C
C
 91 a0001c0001t0001g0174
a0001c0001t0001g0211
a0001c0001t0001g0212
others(88): Show 
a0001c0001t0001g0174
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0213
a0001c0001t0001g0219
a0001c0001t0001g0224
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0128
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0152
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0006c0007t0001g0035
 112 HG00140.hp1
HG00408.hp1
HG00597.hp2
others(109): Show 
HG00140.hp1
HG00408.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG00639.hp2
HG00673.hp1
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01109.hp1
HG01167.hp1
HG01168.hp1
HG01192.hp2
HG01261.hp1
HG01346.hp1
HG01515.hp2
HG01517.hp1
HG01891.hp2
HG01943.hp1
HG02015.hp1
HG02040.hp2
HG02055.hp1
HG02055.hp2
HG02109.hp1
HG02132.hp2
HG02145.hp2
HG02148.hp2
HG02155.hp1
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02293.hp2
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp2
HG02647.hp1
HG02717.hp2
HG02723.hp1
HG02809.hp1
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02922.hp1
HG02965.hp2
HG02976.hp1
HG03017.hp2
HG03041.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03486.hp1
HG03834.hp1
HG03834.hp2
HG04199.hp2
HG06807.hp2
NA18522.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18944.hp1
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18968.hp1
NA18979.hp2
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18988.hp2
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp2
NA19004.hp2
NA19012.hp1
NA19030.hp1
NA19043.hp2
NA19054.hp1
NA19056.hp2
NA19057.hp2
NA19058.hp1
NA19058.hp2
NA19063.hp1
NA19072.hp1
NA19072.hp2
NA19074.hp1
NA19075.hp1
NA19077.hp2
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19091.hp1
NA19240.hp1
NA20300.hp1
NA20300.hp2
 intron_variant MODIFIER c.544+815delA
c.544+815delA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 INFO_REALIGN_3_PRIME chr1 84526867
chr1:84526867 CAA
CAA
 C
C
 24 a0001c0003t0001g0075
a0001c0003t0004g0049
a0001c0006t0008g0016
others(21): Show 
a0001c0003t0001g0075
a0001c0003t0004g0049
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0005g0153
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
 27 HG00741.hp2
HG01168.hp2
HG01169.hp1
others(24): Show 
HG00741.hp2
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02698.hp1
HG02723.hp2
HG02809.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03130.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18612.hp2
NA19043.hp1
NA19240.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.544+814_544+815del
others(2): Show 
c.544+814_544+815delAA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 INFO_REALIGN_3_PRIME chr1 84526867
chr1:84526968 AG
AG
 A
A
 40 a0001c0003t0003g0105
a0001c0003t0004g0055
a0001c0003t0004g0056
others(37): Show 
a0001c0003t0003g0105
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0058
a0001c0003t0004g0059
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0128
a0002c0002t0007g0100
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 46 HG00408.hp1
HG00438.hp1
HG00544.hp1
others(43): Show 
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00673.hp1
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02132.hp2
HG02145.hp1
HG02155.hp1
HG02572.hp2
HG02717.hp2
HG02809.hp1
HG04199.hp2
HG04204.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA19012.hp1
NA19043.hp2
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19091.hp1
 intron_variant MODIFIER c.544+897delG
c.544+897delG
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 INFO_REALIGN_3_PRIME chr1 84526968
chr1:84526992 A
A
 T
T
 2 a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0003t0011g0260
a0001c0003t0011g0261
 2 NA18988.hp2
NA19063.hp1
NA18988.hp2
NA19063.hp1
 intron_variant MODIFIER c.544+919A>T
c.544+919A>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84526992
chr1:84527146 G
G
 A
A
 1 a0001c0001t0001g0187
a0001c0001t0001g0187
 1 HG03579.hp1
HG03579.hp1
 intron_variant MODIFIER c.544+1073G>A
c.544+1073G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84527146
chr1:84527323 T
T
 G
G
 2 a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0003t0011g0260
a0001c0003t0011g0261
 2 NA18988.hp2
NA19063.hp1
NA18988.hp2
NA19063.hp1
 intron_variant MODIFIER c.544+1250T>G
c.544+1250T>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84527323
chr1:84527364 T
T
 C
C
 68 a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
others(65): Show 
a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 83 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(80): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG02055.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02258.hp1
HG02293.hp2
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03041.hp2
HG03130.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03486.hp1
HG03516.hp2
HG03540.hp1
HG03834.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18988.hp2
NA18989.hp2
NA19004.hp2
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19089.hp2
NA19240.hp1
NA19240.hp2
NA20300.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.544+1291T>C
c.544+1291T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84527364
chr1:84527554 T
T
 C
C
 1 a0002c0002t0005g0150
a0002c0002t0005g0150
 1 HG01099.hp1
HG01099.hp1
 intron_variant MODIFIER c.544+1481T>C
c.544+1481T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84527554
chr1:84527629 TAATA
TAATA
 T
T
 24 a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
others(21): Show 
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0009g0013
 29 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(26): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG01192.hp2
HG01346.hp1
HG01943.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02293.hp2
HG02572.hp2
HG02622.hp1
HG02717.hp2
HG02809.hp1
HG03834.hp1
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19089.hp2
NA20300.hp2
 intron_variant MODIFIER c.544+1561_544+1564d
others(6): Show 
c.544+1561_544+1564delAATA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 INFO_REALIGN_3_PRIME chr1 84527629
chr1:84527671 T
T
 C
C
 1 a0001c0001t0001g0188
a0001c0001t0001g0188
 1 HG03453.hp2
HG03453.hp2
 intron_variant MODIFIER c.544+1598T>C
c.544+1598T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84527671
chr1:84527709 T
T
 C
C
 1 a0001c0001t0001g0256
a0001c0001t0001g0256
 1 homoSapiens_chm13v2.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.544+1636T>C
c.544+1636T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84527709
chr1:84527714 T
T
 C
C
 64 a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
others(61): Show 
a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 78 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(75): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG02055.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02258.hp1
HG02293.hp2
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02809.hp1
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03486.hp1
HG03516.hp2
HG03540.hp1
HG03834.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18988.hp2
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19089.hp2
NA19240.hp1
NA20300.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.544+1641T>C
c.544+1641T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84527714
chr1:84527731 C
C
 T
T
 1 a0002c0002t0002g0124
a0002c0002t0002g0124
 1 NA19083.hp2
NA19083.hp2
 intron_variant MODIFIER c.544+1658C>T
c.544+1658C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84527731
chr1:84527732 AT
AT
 A
A
 64 a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
others(61): Show 
a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 78 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(75): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG02055.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02258.hp1
HG02293.hp2
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02809.hp1
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03486.hp1
HG03516.hp2
HG03540.hp1
HG03834.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18988.hp2
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19089.hp2
NA19240.hp1
NA20300.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.544+1668delT
c.544+1668delT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 INFO_REALIGN_3_PRIME chr1 84527732
chr1:84527863 T
T
 A
A
 4 a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
others(1): Show 
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
 5 HG02723.hp2
HG02809.hp2
HG03130.hp1
others(2): Show 
HG02723.hp2
HG02809.hp2
HG03130.hp1
NA19043.hp1
NA19240.hp2
 intron_variant MODIFIER c.544+1790T>A
c.544+1790T>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84527863
chr1:84527909 T
T
 C
C
 1 a0001c0001t0001g0190
a0001c0001t0001g0190
 1 HG01346.hp2
HG01346.hp2
 intron_variant MODIFIER c.544+1836T>C
c.544+1836T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84527909
chr1:84527951 G
G
 A
A
 31 a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
others(28): Show 
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0106
a0002c0002t0012g0082
a0005c0009t0012g0083
a0006c0007t0001g0035
 33 HG00280.hp1
HG00609.hp1
HG00621.hp2
others(30): Show 
HG00280.hp1
HG00609.hp1
HG00621.hp2
HG00639.hp2
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01168.hp1
HG01993.hp1
HG02109.hp1
HG02300.hp1
HG02451.hp1
HG02630.hp1
HG02735.hp2
HG02738.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03471.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG04115.hp2
HG04228.hp1
NA18980.hp1
NA18994.hp1
NA19077.hp1
NA19090.hp1
NA21309.hp2
 intron_variant MODIFIER c.544+1878G>A
c.544+1878G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84527951
chr1:84528021 G
G
 A
A
 2 a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0005g0154
a0002c0002t0005g0155
 2 HG02145.hp2
HG02258.hp2
HG02145.hp2
HG02258.hp2
 intron_variant MODIFIER c.544+1948G>A
c.544+1948G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84528021
chr1:84528171 T
T
 A
A
 3 a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
 4 HG02809.hp2
HG03130.hp1
NA19043.hp1
others(1): Show 
HG02809.hp2
HG03130.hp1
NA19043.hp1
NA19240.hp2
 intron_variant MODIFIER c.544+2098T>A
c.544+2098T>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84528171
chr1:84528339 T
T
 C
C
 1 a0003c0004t0001g0077
a0003c0004t0001g0077
 1 HG01891.hp1
HG01891.hp1
 intron_variant MODIFIER c.544+2266T>C
c.544+2266T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84528339
chr1:84528513 C
C
 T
T
 1 a0001c0003t0003g0102
a0001c0003t0003g0102
 1 HG03195.hp2
HG03195.hp2
 intron_variant MODIFIER c.544+2440C>T
c.544+2440C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84528513
chr1:84528579 C
C
 T
T
 149 a0001c0003t0001g0075
a0001c0003t0001g0088
a0001c0003t0001g0089
others(146): Show 
a0001c0003t0001g0075
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 175 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(172): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01192.hp2
HG01261.hp1
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01515.hp2
HG01517.hp1
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG01993.hp1
HG02015.hp1
HG02040.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp2
HG02155.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp2
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04184.hp1
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18944.hp1
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18968.hp1
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18988.hp2
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19004.hp2
NA19012.hp1
NA19030.hp1
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19056.hp2
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19090.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
NA20805.hp1
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.544+2506C>T
c.544+2506C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84528579
chr1:84528583 A
A
 T
T
 1 a0001c0001t0001g0166
a0001c0001t0001g0166
 1 NA18987.hp2
NA18987.hp2
 intron_variant MODIFIER c.544+2510A>T
c.544+2510A>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84528583
chr1:84528628 C
C
 T
T
 4 a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
others(1): Show 
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
 5 HG02723.hp2
HG02809.hp2
HG03130.hp1
others(2): Show 
HG02723.hp2
HG02809.hp2
HG03130.hp1
NA19043.hp1
NA19240.hp2
 intron_variant MODIFIER c.544+2555C>T
c.544+2555C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84528628
chr1:84528744 C
C
 T
T
 4 a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
others(1): Show 
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
 5 HG02723.hp2
HG02809.hp2
HG03130.hp1
others(2): Show 
HG02723.hp2
HG02809.hp2
HG03130.hp1
NA19043.hp1
NA19240.hp2
 intron_variant MODIFIER c.544+2671C>T
c.544+2671C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84528744
chr1:84528844 T
T
 C
C
 4 a0002c0002t0003g0020
a0002c0002t0003g0132
a0002c0002t0003g0133
others(1): Show 
a0002c0002t0003g0020
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
 5 HG00280.hp1
HG00735.hp1
HG01106.hp1
others(2): Show 
HG00280.hp1
HG00735.hp1
HG01106.hp1
HG02300.hp1
NA21309.hp2
 intron_variant MODIFIER c.544+2771T>C
c.544+2771T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84528844
chr1:84528960 A
A
 T
T
 1 a0001c0001t0001g0178
a0001c0001t0001g0178
 1 NA19075.hp2
NA19075.hp2
 intron_variant MODIFIER c.544+2887A>T
c.544+2887A>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84528960
chr1:84528999 CTA
CTA
 C
C
 4 a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
others(1): Show 
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
 5 HG02723.hp2
HG02809.hp2
HG03130.hp1
others(2): Show 
HG02723.hp2
HG02809.hp2
HG03130.hp1
NA19043.hp1
NA19240.hp2
 intron_variant MODIFIER c.544+2936_544+2937d
others(4): Show 
c.544+2936_544+2937delAT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 INFO_REALIGN_3_PRIME chr1 84528999
chr1:84529009 A
A
 T
T
 1 a0002c0002t0002g0114
a0002c0002t0002g0114
 1 HG02080.hp1
HG02080.hp1
 intron_variant MODIFIER c.544+2936A>T
c.544+2936A>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84529009
chr1:84529082 CATT
CATT
 C
C
 19 a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
others(16): Show 
a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
 21 HG00741.hp2
HG01168.hp2
HG01169.hp2
others(18): Show 
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02698.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.544+3011_544+3013d
others(5): Show 
c.544+3011_544+3013delTTA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 INFO_REALIGN_3_PRIME chr1 84529082
chr1:84529280 GAAAT
GAAAT
 G
G
 19 a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
others(16): Show 
a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
 21 HG00741.hp2
HG01168.hp2
HG01169.hp2
others(18): Show 
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02698.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.544+3208_544+3211d
others(6): Show 
c.544+3208_544+3211delAAAT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84529280
chr1:84529294 A
A
 T
T
 1 a0001c0001t0001g0178
a0001c0001t0001g0178
 1 NA19075.hp2
NA19075.hp2
 intron_variant MODIFIER c.544+3221A>T
c.544+3221A>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84529294
chr1:84529352 CA
CA
 C
C
 4 a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
others(1): Show 
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
 5 HG02723.hp2
HG02809.hp2
HG03130.hp1
others(2): Show 
HG02723.hp2
HG02809.hp2
HG03130.hp1
NA19043.hp1
NA19240.hp2
 intron_variant MODIFIER c.544+3280delA
c.544+3280delA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84529352
chr1:84529373 G
G
 C
C
 18 a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
others(15): Show 
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 25 HG01891.hp2
HG02055.hp1
HG02257.hp2
others(22): Show 
HG01891.hp2
HG02055.hp1
HG02257.hp2
HG02258.hp1
HG02451.hp2
HG02486.hp1
HG02622.hp2
HG02630.hp2
HG02647.hp1
HG02723.hp1
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02922.hp1
HG02965.hp2
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03486.hp1
HG06807.hp2
NA18522.hp2
NA19240.hp1
 intron_variant MODIFIER c.544+3300G>C
c.544+3300G>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84529373
chr1:84529452 C
C
 T
T
 1 a0001c0001t0001g0210
a0001c0001t0001g0210
 1 HG02109.hp2
HG02109.hp2
 intron_variant MODIFIER c.544+3379C>T
c.544+3379C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84529452
chr1:84529506 TGAAACGT
others(11): Show 
TGAAACGTGACATTTTAGA
 T
T
 1 a0001c0001t0009g0229
a0001c0001t0009g0229
 1 NA18940.hp1
NA18940.hp1
 intron_variant MODIFIER c.545-3350_545-3333d
others(20): Show 
c.545-3350_545-3333delACGTGACATTTTAGAGAA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 INFO_REALIGN_3_PRIME chr1 84529506
chr1:84529576 C
C
 A
A
 1 a0001c0001t0001g0191
a0001c0001t0001g0191
 1 HG01361.hp1
HG01361.hp1
 intron_variant MODIFIER c.545-3284C>A
c.545-3284C>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84529576
chr1:84529576 C
C
 CT
CT
 57 a0001c0001t0001g0164
a0001c0001t0001g0177
a0001c0001t0001g0180
others(54): Show 
a0001c0001t0001g0164
a0001c0001t0001g0177
a0001c0001t0001g0180
a0001c0001t0001g0187
a0001c0001t0001g0188
a0001c0001t0001g0189
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0213
a0001c0001t0001g0215
a0001c0001t0001g0218
a0001c0001t0001g0235
a0001c0001t0001g0239
a0001c0001t0001g0247
a0001c0001t0001g0248
a0001c0001t0001g0249
a0001c0001t0001g0250
a0001c0001t0001g0253
a0001c0001t0001g0254
a0001c0001t0001g0269
a0001c0001t0009g0229
a0001c0001t0013g0165
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0092
a0001c0003t0001g0093
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0041
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0059
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0003c0004t0001g0067
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0038
 66 HG00544.hp2
HG00597.hp1
HG00597.hp2
others(63): Show 
HG00544.hp2
HG00597.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG00642.hp2
HG00741.hp1
HG01109.hp1
HG01167.hp2
HG01192.hp1
HG01192.hp2
HG01261.hp1
HG01346.hp1
HG01515.hp2
HG01891.hp2
HG02040.hp2
HG02080.hp2
HG02293.hp2
HG02451.hp2
HG02486.hp2
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02647.hp1
HG02717.hp2
HG02809.hp1
HG02818.hp1
HG02922.hp1
HG02976.hp1
HG03041.hp2
HG03139.hp2
HG03195.hp1
HG03209.hp2
HG03225.hp2
HG03453.hp1
HG03453.hp2
HG03579.hp1
HG03834.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp1
NA18612.hp2
NA18940.hp1
NA18940.hp2
NA18942.hp1
NA18942.hp2
NA18945.hp1
NA18955.hp2
NA18968.hp1
NA18969.hp2
NA18975.hp1
NA18975.hp2
NA18988.hp2
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19068.hp2
NA19072.hp1
NA19083.hp1
NA19089.hp2
NA20300.hp2
 intron_variant MODIFIER c.545-3260dupT
c.545-3260dupT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 INFO_REALIGN_3_PRIME chr1 84529576
chr1:84529576 C
C
 CTT
CTT
 29 a0001c0001t0001g0178
a0001c0001t0001g0208
a0001c0001t0001g0209
others(26): Show 
a0001c0001t0001g0178
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0007g0095
a0001c0003t0001g0090
a0001c0003t0003g0102
a0001c0003t0004g0048
a0001c0003t0004g0054
a0001c0003t0004g0058
a0002c0002t0002g0144
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0151
a0002c0002t0005g0153
a0002c0002t0007g0106
a0003c0004t0001g0014
a0003c0004t0001g0066
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0076
a0004c0005t0001g0011
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0037
a0004c0005t0001g0039
a0006c0007t0001g0035
 34 HG00140.hp1
HG00639.hp2
HG00741.hp2
others(31): Show 
HG00140.hp1
HG00639.hp2
HG00741.hp2
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01167.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01496.hp2
HG01517.hp1
HG01975.hp1
HG02055.hp1
HG02109.hp1
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02280.hp1
HG02486.hp1
HG02572.hp1
HG02698.hp1
HG02723.hp1
HG03041.hp1
HG03195.hp2
HG03471.hp2
HG03486.hp1
NA18965.hp1
NA18990.hp2
NA19004.hp1
NA19075.hp2
NA19240.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.545-3261_545-3260d
others(4): Show 
c.545-3261_545-3260dupTT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 INFO_REALIGN_3_PRIME chr1 84529576
chr1:84529576 C
C
 CTTT
CTTT
 56 a0001c0003t0004g0040
a0002c0002t0002g0006
a0002c0002t0002g0007
others(53): Show 
a0001c0003t0004g0040
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0114
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0137
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0152
a0002c0002t0006g0063
a0002c0002t0007g0100
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0001g0065
a0003c0004t0001g0073
a0003c0004t0001g0074
a0005c0009t0012g0083
 63 HG00280.hp1
HG00408.hp1
HG00609.hp1
others(60): Show 
HG00280.hp1
HG00408.hp1
HG00609.hp1
HG00673.hp1
HG01106.hp1
HG01109.hp2
HG01168.hp1
HG01361.hp2
HG01993.hp1
HG02015.hp1
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02132.hp2
HG02155.hp1
HG02300.hp1
HG02451.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03209.hp1
HG03471.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG04115.hp2
HG04184.hp1
HG04199.hp2
HG04204.hp1
NA18747.hp2
NA18944.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18967.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19012.hp1
NA19030.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19090.hp1
NA19091.hp1
NA21309.hp2
 intron_variant MODIFIER c.545-3262_545-3260d
others(5): Show 
c.545-3262_545-3260dupTTT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 INFO_REALIGN_3_PRIME chr1 84529576
chr1:84529576 C
C
 CTTTT
CTTTT
 12 a0002c0002t0002g0019
a0002c0002t0002g0113
a0002c0002t0002g0123
others(9): Show 
a0002c0002t0002g0019
a0002c0002t0002g0113
a0002c0002t0002g0123
a0002c0002t0003g0097
a0002c0002t0003g0136
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0005g0150
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0084
 13 HG00544.hp1
HG00621.hp2
HG00735.hp1
others(10): Show 
HG00544.hp1
HG00621.hp2
HG00735.hp1
HG01099.hp1
HG02258.hp2
HG02630.hp1
HG02735.hp2
HG02738.hp1
HG03516.hp1
HG04228.hp1
NA18946.hp2
NA18948.hp1
NA19074.hp1
 intron_variant MODIFIER c.545-3263_545-3260d
others(6): Show 
c.545-3263_545-3260dupTTTT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 INFO_REALIGN_3_PRIME chr1 84529576
chr1:84529620 T
T
 C
C
 1 a0001c0003t0003g0102
a0001c0003t0003g0102
 1 HG03195.hp2
HG03195.hp2
 intron_variant MODIFIER c.545-3240T>C
c.545-3240T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84529620
chr1:84529680 T
T
 C
C
 4 a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
others(1): Show 
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
 5 HG02723.hp2
HG02809.hp2
HG03130.hp1
others(2): Show 
HG02723.hp2
HG02809.hp2
HG03130.hp1
NA19043.hp1
NA19240.hp2
 intron_variant MODIFIER c.545-3180T>C
c.545-3180T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84529680
chr1:84529769 C
C
 T
T
 3 a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0109
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0109
 3 HG02451.hp1
HG03139.hp1
HG03579.hp2
HG02451.hp1
HG03139.hp1
HG03579.hp2
 intron_variant MODIFIER c.545-3091C>T
c.545-3091C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84529769
chr1:84529803 C
C
 T
T
 1 a0001c0001t0001g0246
a0001c0001t0001g0246
 1 HG02698.hp2
HG02698.hp2
 intron_variant MODIFIER c.545-3057C>T
c.545-3057C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84529803
chr1:84529858 CT
CT
 C
C
 4 a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
others(1): Show 
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0003c0004t0006g0068
 6 HG02258.hp1
HG02630.hp2
HG02818.hp2
others(3): Show 
HG02258.hp1
HG02630.hp2
HG02818.hp2
HG02895.hp1
HG02965.hp2
HG03225.hp1
 intron_variant MODIFIER c.545-2987delT
c.545-2987delT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 INFO_REALIGN_3_PRIME chr1 84529858
chr1:84529943 G
G
 A
A
 1 a0001c0003t0004g0040
a0001c0003t0004g0040
 1 HG02055.hp2
HG02055.hp2
 intron_variant MODIFIER c.545-2917G>A
c.545-2917G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84529943
chr1:84530189 A
A
 C
C
 99 a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
others(96): Show 
a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0106
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 116 HG00140.hp1
HG00280.hp1
HG00597.hp2
others(113): Show 
HG00140.hp1
HG00280.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00735.hp1
HG00741.hp2
HG01106.hp1
HG01109.hp2
HG01168.hp1
HG01168.hp2
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG01993.hp1
HG02055.hp1
HG02055.hp2
HG02109.hp1
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02258.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03041.hp2
HG03130.hp1
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04184.hp1
HG04199.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18980.hp1
NA18988.hp2
NA18989.hp2
NA18994.hp1
NA19004.hp2
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19077.hp1
NA19089.hp2
NA19090.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
NA20805.hp1
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.545-2671A>C
c.545-2671A>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84530189
chr1:84530193 T
T
 G
G
 2 a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0003t0011g0260
a0001c0003t0011g0261
 2 NA18988.hp2
NA19063.hp1
NA18988.hp2
NA19063.hp1
 intron_variant MODIFIER c.545-2667T>G
c.545-2667T>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84530193
chr1:84530360 T
T
 G
G
 1 a0001c0003t0004g0040
a0001c0003t0004g0040
 1 HG02055.hp2
HG02055.hp2
 intron_variant MODIFIER c.545-2500T>G
c.545-2500T>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84530360
chr1:84530433 C
C
 A
A
 1 a0002c0002t0003g0146
a0002c0002t0003g0146
 1 HG01109.hp2
HG01109.hp2
 intron_variant MODIFIER c.545-2427C>A
c.545-2427C>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84530433
chr1:84530494 T
T
 C
C
 29 a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
others(26): Show 
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0012g0082
a0005c0009t0012g0083
 31 HG00280.hp1
HG00609.hp1
HG00621.hp2
others(28): Show 
HG00280.hp1
HG00609.hp1
HG00621.hp2
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01168.hp1
HG01993.hp1
HG02300.hp1
HG02451.hp1
HG02630.hp1
HG02735.hp2
HG02738.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03471.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG04115.hp2
HG04228.hp1
NA18980.hp1
NA18994.hp1
NA19077.hp1
NA19090.hp1
NA21309.hp2
 intron_variant MODIFIER c.545-2366T>C
c.545-2366T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84530494
chr1:84530573 A
A
 T
T
 31 a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
others(28): Show 
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0106
a0002c0002t0012g0082
a0005c0009t0012g0083
a0006c0007t0001g0035
 33 HG00280.hp1
HG00609.hp1
HG00621.hp2
others(30): Show 
HG00280.hp1
HG00609.hp1
HG00621.hp2
HG00639.hp2
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01168.hp1
HG01993.hp1
HG02109.hp1
HG02300.hp1
HG02451.hp1
HG02630.hp1
HG02735.hp2
HG02738.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03471.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG04115.hp2
HG04228.hp1
NA18980.hp1
NA18994.hp1
NA19077.hp1
NA19090.hp1
NA21309.hp2
 intron_variant MODIFIER c.545-2287A>T
c.545-2287A>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84530573
chr1:84530823 T
T
 A
A
 149 a0001c0003t0001g0075
a0001c0003t0001g0088
a0001c0003t0001g0089
others(146): Show 
a0001c0003t0001g0075
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 175 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(172): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01192.hp2
HG01261.hp1
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01515.hp2
HG01517.hp1
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG01993.hp1
HG02015.hp1
HG02040.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp2
HG02155.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp2
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04184.hp1
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18944.hp1
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18968.hp1
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18988.hp2
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19004.hp2
NA19012.hp1
NA19030.hp1
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19056.hp2
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19090.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
NA20805.hp1
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.545-2037T>A
c.545-2037T>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84530823
chr1:84530848 T
T
 C
C
 143 a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
others(140): Show 
a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 169 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(166): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG01993.hp1
HG02015.hp1
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp2
HG02155.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04184.hp1
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18944.hp1
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18968.hp1
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18988.hp2
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19004.hp2
NA19012.hp1
NA19030.hp1
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19056.hp2
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19090.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
NA20805.hp1
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.545-2012T>C
c.545-2012T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84530848
chr1:84530883 C
C
 T
T
 1 a0001c0001t0001g0212
a0001c0001t0001g0212
 1 NA19077.hp2
NA19077.hp2
 intron_variant MODIFIER c.545-1977C>T
c.545-1977C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84530883
chr1:84530921 T
T
 C
C
 69 a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
others(66): Show 
a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0019
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 85 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(82): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG02055.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02258.hp1
HG02293.hp2
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03041.hp2
HG03130.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03486.hp1
HG03516.hp2
HG03540.hp1
HG03834.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18948.hp1
NA18968.hp1
NA18988.hp2
NA18989.hp2
NA19004.hp2
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19074.hp1
NA19089.hp2
NA19240.hp1
NA19240.hp2
NA20300.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.545-1939T>C
c.545-1939T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84530921
chr1:84530982 C
C
 T
T
 2 a0004c0005t0001g0012
a0004c0005t0001g0039
a0004c0005t0001g0012
a0004c0005t0001g0039
 3 HG02647.hp1
HG03225.hp2
NA19240.hp1
HG02647.hp1
HG03225.hp2
NA19240.hp1
 intron_variant MODIFIER c.545-1878C>T
c.545-1878C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84530982
chr1:84531033 A
A
 G
G
 1 a0001c0001t0001g0205
a0001c0001t0001g0205
 1 HG01261.hp2
HG01261.hp2
 intron_variant MODIFIER c.545-1827A>G
c.545-1827A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84531033
chr1:84531203 A
A
 C
C
 69 a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
others(66): Show 
a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0019
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 85 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(82): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG02055.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02258.hp1
HG02293.hp2
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03041.hp2
HG03130.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03486.hp1
HG03516.hp2
HG03540.hp1
HG03834.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18948.hp1
NA18968.hp1
NA18988.hp2
NA18989.hp2
NA19004.hp2
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19074.hp1
NA19089.hp2
NA19240.hp1
NA19240.hp2
NA20300.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.545-1657A>C
c.545-1657A>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84531203
chr1:84531288 G
G
 A
A
 1 a0001c0001t0001g0246
a0001c0001t0001g0246
 1 HG02698.hp2
HG02698.hp2
 intron_variant MODIFIER c.545-1572G>A
c.545-1572G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84531288
chr1:84531382 T
T
 C
C
 149 a0001c0003t0001g0075
a0001c0003t0001g0088
a0001c0003t0001g0089
others(146): Show 
a0001c0003t0001g0075
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 175 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(172): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01192.hp2
HG01261.hp1
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01515.hp2
HG01517.hp1
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG01993.hp1
HG02015.hp1
HG02040.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp2
HG02155.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp2
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04184.hp1
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18944.hp1
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18968.hp1
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18988.hp2
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19004.hp2
NA19012.hp1
NA19030.hp1
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19056.hp2
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19090.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
NA20805.hp1
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.545-1478T>C
c.545-1478T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84531382
chr1:84531415 G
G
 A
A
 2 a0003c0004t0001g0015
a0003c0004t0001g0081
a0003c0004t0001g0015
a0003c0004t0001g0081
 3 HG02895.hp2
HG02897.hp2
HG02970.hp1
HG02895.hp2
HG02897.hp2
HG02970.hp1
 intron_variant MODIFIER c.545-1445G>A
c.545-1445G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84531415
chr1:84531450 G
G
 A
A
 23 a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
others(20): Show 
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0009g0013
 28 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(25): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG01192.hp2
HG01346.hp1
HG01943.hp1
HG02145.hp1
HG02148.hp2
HG02293.hp2
HG02572.hp2
HG02622.hp1
HG02717.hp2
HG02809.hp1
HG03834.hp1
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19089.hp2
NA20300.hp2
 intron_variant MODIFIER c.545-1410G>A
c.545-1410G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84531450
chr1:84531457 C
C
 A
A
 3 a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
 4 HG02809.hp2
HG03130.hp1
NA19043.hp1
others(1): Show 
HG02809.hp2
HG03130.hp1
NA19043.hp1
NA19240.hp2
 intron_variant MODIFIER c.545-1403C>A
c.545-1403C>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84531457
chr1:84531570 C
C
 CT
CT
 23 a0001c0001t0001g0168
a0001c0001t0001g0173
a0001c0001t0001g0250
others(20): Show 
a0001c0001t0001g0168
a0001c0001t0001g0173
a0001c0001t0001g0250
a0001c0001t0009g0229
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0003c0004t0001g0074
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 30 HG00544.hp2
HG01891.hp2
HG02055.hp1
others(27): Show 
HG00544.hp2
HG01891.hp2
HG02055.hp1
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02451.hp2
HG02486.hp1
HG02622.hp2
HG02630.hp2
HG02647.hp1
HG02723.hp1
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02922.hp1
HG02965.hp2
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03486.hp1
HG04184.hp1
HG06807.hp2
NA18522.hp2
NA18940.hp1
NA19030.hp2
NA19240.hp1
 intron_variant MODIFIER c.545-1269dupT
c.545-1269dupT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 INFO_REALIGN_3_PRIME chr1 84531570
chr1:84531570 CT
CT
 C
C
 97 a0001c0001t0001g0228
a0001c0003t0001g0088
a0001c0003t0001g0089
others(94): Show 
a0001c0001t0001g0228
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0009g0013
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0114
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0005c0009t0012g0083
a0006c0007t0001g0035
 113 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(110): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00673.hp1
HG00735.hp1
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01169.hp1
HG01192.hp2
HG01261.hp1
HG01346.hp1
HG01515.hp2
HG01517.hp1
HG01943.hp1
HG01993.hp1
HG02015.hp1
HG02040.hp2
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp2
HG02155.hp1
HG02258.hp2
HG02280.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02630.hp1
HG02717.hp2
HG02735.hp2
HG02809.hp1
HG02886.hp2
HG02976.hp2
HG03017.hp2
HG03041.hp1
HG03139.hp1
HG03471.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04199.hp2
HG04204.hp1
HG04228.hp1
NA18612.hp2
NA18940.hp2
NA18944.hp1
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18968.hp1
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19004.hp2
NA19012.hp1
NA19030.hp1
NA19043.hp2
NA19056.hp2
NA19057.hp2
NA19058.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19091.hp1
NA20300.hp2
NA21309.hp2
 intron_variant MODIFIER c.545-1269delT
c.545-1269delT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 INFO_REALIGN_3_PRIME chr1 84531570
chr1:84531729 A
A
 G
G
 1 a0001c0001t0001g0184
a0001c0001t0001g0184
 1 NA18944.hp2
NA18944.hp2
 intron_variant MODIFIER c.545-1131A>G
c.545-1131A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84531729
chr1:84532245 C
C
 T
T
 116 a0001c0001t0001g0001
a0001c0001t0001g0003
a0001c0001t0001g0008
others(113): Show 
a0001c0001t0001g0001
a0001c0001t0001g0003
a0001c0001t0001g0008
a0001c0001t0001g0009
a0001c0001t0001g0025
a0001c0001t0001g0026
a0001c0001t0001g0060
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0163
a0001c0001t0001g0164
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0170
a0001c0001t0001g0171
a0001c0001t0001g0172
a0001c0001t0001g0173
a0001c0001t0001g0174
a0001c0001t0001g0175
a0001c0001t0001g0176
a0001c0001t0001g0177
a0001c0001t0001g0178
a0001c0001t0001g0179
a0001c0001t0001g0180
a0001c0001t0001g0181
a0001c0001t0001g0182
a0001c0001t0001g0183
a0001c0001t0001g0184
a0001c0001t0001g0185
a0001c0001t0001g0186
a0001c0001t0001g0187
a0001c0001t0001g0188
a0001c0001t0001g0189
a0001c0001t0001g0190
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0204
a0001c0001t0001g0205
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0213
a0001c0001t0001g0214
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0001g0219
a0001c0001t0001g0220
a0001c0001t0001g0221
a0001c0001t0001g0222
a0001c0001t0001g0223
a0001c0001t0001g0224
a0001c0001t0001g0225
a0001c0001t0001g0226
a0001c0001t0001g0227
a0001c0001t0001g0228
a0001c0001t0001g0230
a0001c0001t0001g0231
a0001c0001t0001g0232
a0001c0001t0001g0233
a0001c0001t0001g0234
a0001c0001t0001g0235
a0001c0001t0001g0236
a0001c0001t0001g0237
a0001c0001t0001g0238
a0001c0001t0001g0239
a0001c0001t0001g0240
a0001c0001t0001g0241
a0001c0001t0001g0243
a0001c0001t0001g0244
a0001c0001t0001g0245
a0001c0001t0001g0246
a0001c0001t0001g0247
a0001c0001t0001g0248
a0001c0001t0001g0249
a0001c0001t0001g0250
a0001c0001t0001g0251
a0001c0001t0001g0252
a0001c0001t0001g0256
a0001c0001t0001g0257
a0001c0001t0001g0258
a0001c0001t0001g0259
a0001c0001t0001g0264
a0001c0001t0001g0265
a0001c0001t0001g0266
a0001c0001t0001g0267
a0001c0001t0001g0268
a0001c0001t0001g0269
a0001c0001t0007g0017
a0001c0001t0007g0127
a0001c0001t0009g0229
a0001c0001t0013g0165
a0007c0008t0001g0242
 133 HG00140.hp2
HG00280.hp2
HG00408.hp2
others(130): Show 
HG00140.hp2
HG00280.hp2
HG00408.hp2
HG00438.hp2
HG00544.hp2
HG00597.hp1
HG00609.hp2
HG00642.hp1
HG00642.hp2
HG00673.hp2
HG00735.hp2
HG00738.hp1
HG00738.hp2
HG00741.hp1
HG01070.hp2
HG01071.hp2
HG01081.hp2
HG01099.hp2
HG01106.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp1
HG01255.hp1
HG01255.hp2
HG01261.hp2
HG01346.hp2
HG01361.hp1
HG01496.hp1
HG01515.hp1
HG01517.hp2
HG01943.hp2
HG01975.hp2
HG01993.hp2
HG02015.hp2
HG02040.hp1
HG02080.hp2
HG02083.hp2
HG02109.hp2
HG02132.hp1
HG02148.hp1
HG02155.hp2
HG02257.hp1
HG02280.hp2
HG02293.hp1
HG02300.hp2
HG02486.hp2
HG02647.hp2
HG02698.hp2
HG02717.hp1
HG02735.hp1
HG02738.hp2
HG02886.hp1
HG02897.hp1
HG02970.hp2
HG03017.hp1
HG03130.hp2
HG03453.hp1
HG03453.hp2
HG03491.hp2
HG03492.hp2
HG03540.hp2
HG03579.hp1
HG03669.hp2
HG03710.hp1
HG03834.hp2
HG04115.hp1
HG04184.hp2
HG04204.hp2
HG04228.hp2
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18940.hp1
NA18942.hp2
NA18944.hp2
NA18945.hp2
NA18946.hp1
NA18948.hp2
NA18950.hp2
NA18951.hp1
NA18952.hp2
NA18954.hp1
NA18955.hp2
NA18957.hp2
NA18961.hp2
NA18962.hp2
NA18965.hp2
NA18967.hp1
NA18968.hp2
NA18969.hp1
NA18969.hp2
NA18971.hp1
NA18971.hp2
NA18975.hp1
NA18975.hp2
NA18979.hp1
NA18980.hp2
NA18983.hp2
NA18986.hp1
NA18987.hp2
NA18988.hp1
NA18989.hp1
NA18990.hp2
NA18992.hp2
NA18994.hp2
NA19004.hp1
NA19007.hp1
NA19007.hp2
NA19012.hp2
NA19030.hp2
NA19054.hp2
NA19056.hp1
NA19057.hp1
NA19058.hp1
NA19063.hp2
NA19065.hp1
NA19065.hp2
NA19066.hp1
NA19066.hp2
NA19068.hp1
NA19068.hp2
NA19072.hp1
NA19075.hp2
NA19077.hp2
NA19079.hp2
NA19083.hp1
NA19084.hp2
NA19089.hp1
NA19090.hp2
NA19091.hp2
NA20300.hp1
NA20805.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.545-615C>T
c.545-615C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84532245
chr1:84532322 C
C
 G
G
 1 a0001c0006t0014g0061
a0001c0006t0014g0061
 1 HG02723.hp2
HG02723.hp2
 intron_variant MODIFIER c.545-538C>G
c.545-538C>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84532322
chr1:84532357 G
G
 A
A
 64 a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
others(61): Show 
a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 78 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(75): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG02055.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02258.hp1
HG02293.hp2
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02809.hp1
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03486.hp1
HG03516.hp2
HG03540.hp1
HG03834.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18988.hp2
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19089.hp2
NA19240.hp1
NA20300.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.545-503G>A
c.545-503G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84532357
chr1:84532373 G
G
 A
A
 9 a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
others(6): Show 
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
 12 HG01070.hp1
HG01071.hp1
HG01081.hp1
others(9): Show 
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01167.hp1
HG01169.hp1
HG02145.hp2
HG02258.hp2
HG02280.hp1
HG02572.hp1
HG03041.hp1
NA19030.hp1
 intron_variant MODIFIER c.545-487G>A
c.545-487G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84532373
chr1:84532492 T
T
 C
C
 1 a0001c0001t0001g0231
a0001c0001t0001g0231
 1 HG01517.hp2
HG01517.hp2
 intron_variant MODIFIER c.545-368T>C
c.545-368T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84532492
chr1:84532495 CA
CA
 C
C
 8 a0001c0003t0004g0046
a0003c0004t0001g0015
a0003c0004t0001g0064
others(5): Show 
a0001c0003t0004g0046
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
 9 HG01891.hp1
HG02895.hp2
HG02897.hp2
others(6): Show 
HG01891.hp1
HG02895.hp2
HG02897.hp2
HG02965.hp1
HG02970.hp1
HG03516.hp2
HG03540.hp1
HG04199.hp1
NA19089.hp2
 intron_variant MODIFIER c.545-353delA
c.545-353delA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 INFO_REALIGN_3_PRIME chr1 84532495
chr1:84532680 TAAAC
TAAAC
 T
T
 64 a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
others(61): Show 
a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 78 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(75): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG02055.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02258.hp1
HG02293.hp2
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02809.hp1
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03486.hp1
HG03516.hp2
HG03540.hp1
HG03834.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18988.hp2
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19089.hp2
NA19240.hp1
NA20300.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.545-176_545-173del
others(4): Show 
c.545-176_545-173delCAAA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 INFO_REALIGN_3_PRIME chr1 84532680
chr1:84532762 C
C
 G
G
 99 a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
others(96): Show 
a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0106
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 116 HG00140.hp1
HG00280.hp1
HG00597.hp2
others(113): Show 
HG00140.hp1
HG00280.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00735.hp1
HG00741.hp2
HG01106.hp1
HG01109.hp2
HG01168.hp1
HG01168.hp2
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG01993.hp1
HG02055.hp1
HG02055.hp2
HG02109.hp1
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02258.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03041.hp2
HG03130.hp1
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04184.hp1
HG04199.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18980.hp1
NA18988.hp2
NA18989.hp2
NA18994.hp1
NA19004.hp2
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19077.hp1
NA19089.hp2
NA19090.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
NA20805.hp1
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.545-98C>G
c.545-98C>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84532762
chr1:84532797 G
G
 A
A
 1 a0003c0004t0001g0069
a0003c0004t0001g0069
 1 HG02698.hp1
HG02698.hp1
 intron_variant MODIFIER c.545-63G>A
c.545-63G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 6/13 chr1 84532797
chr1:84533395 C
C
 T
T
 68 a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
others(65): Show 
a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 83 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(80): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG02055.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02258.hp1
HG02293.hp2
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03041.hp2
HG03130.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03486.hp1
HG03516.hp2
HG03540.hp1
HG03834.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18988.hp2
NA18989.hp2
NA19004.hp2
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19089.hp2
NA19240.hp1
NA19240.hp2
NA20300.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.660-314C>T
c.660-314C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 7/13 chr1 84533395
chr1:84533474 T
T
 C
C
 2 a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0003t0011g0260
a0001c0003t0011g0261
 2 NA18988.hp2
NA19063.hp1
NA18988.hp2
NA19063.hp1
 intron_variant MODIFIER c.660-235T>C
c.660-235T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 7/13 chr1 84533474
chr1:84533544 G
G
 C
C
 31 a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
others(28): Show 
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0106
a0002c0002t0012g0082
a0005c0009t0012g0083
a0006c0007t0001g0035
 33 HG00280.hp1
HG00609.hp1
HG00621.hp2
others(30): Show 
HG00280.hp1
HG00609.hp1
HG00621.hp2
HG00639.hp2
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01168.hp1
HG01993.hp1
HG02109.hp1
HG02300.hp1
HG02451.hp1
HG02630.hp1
HG02735.hp2
HG02738.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03471.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG04115.hp2
HG04228.hp1
NA18980.hp1
NA18994.hp1
NA19077.hp1
NA19090.hp1
NA21309.hp2
 intron_variant MODIFIER c.660-165G>C
c.660-165G>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 7/13 chr1 84533544
chr1:84533606 A
A
 G
G
 1 a0001c0003t0004g0052
a0001c0003t0004g0052
 1 NA18968.hp1
NA18968.hp1
 intron_variant MODIFIER c.660-103A>G
c.660-103A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 7/13 chr1 84533606
chr1:84533621 G
G
 T
T
 1 a0001c0003t0004g0051
a0001c0003t0004g0051
 1 NA19058.hp2
NA19058.hp2
 intron_variant MODIFIER c.660-88G>T
c.660-88G>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 7/13 chr1 84533621
chr1:84533643 A
A
 G
G
 26 a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
others(23): Show 
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0009g0013
a0002c0002t0002g0019
 32 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(29): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG01192.hp2
HG01346.hp1
HG01943.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02293.hp2
HG02572.hp2
HG02622.hp1
HG02717.hp2
HG02809.hp1
HG03195.hp2
HG03834.hp1
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18948.hp1
NA18968.hp1
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19074.hp1
NA19089.hp2
NA20300.hp2
 intron_variant MODIFIER c.660-66A>G
c.660-66A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 7/13 chr1 84533643
chr1:84533888 T
T
 C
C
 100 a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
others(97): Show 
a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0019
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0106
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 118 HG00140.hp1
HG00280.hp1
HG00597.hp2
others(115): Show 
HG00140.hp1
HG00280.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00735.hp1
HG00741.hp2
HG01106.hp1
HG01109.hp2
HG01168.hp1
HG01168.hp2
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG01993.hp1
HG02055.hp1
HG02055.hp2
HG02109.hp1
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02258.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03041.hp2
HG03130.hp1
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04184.hp1
HG04199.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18948.hp1
NA18968.hp1
NA18980.hp1
NA18988.hp2
NA18989.hp2
NA18994.hp1
NA19004.hp2
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19074.hp1
NA19077.hp1
NA19089.hp2
NA19090.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
NA20805.hp1
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.717+122T>C
c.717+122T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84533888
chr1:84534106 T
T
 C
C
 1 a0001c0001t0009g0229
a0001c0001t0009g0229
 1 NA18940.hp1
NA18940.hp1
 intron_variant MODIFIER c.717+340T>C
c.717+340T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84534106
chr1:84534107 A
A
 T
T
 1 a0001c0001t0009g0229
a0001c0001t0009g0229
 1 NA18940.hp1
NA18940.hp1
 intron_variant MODIFIER c.717+341A>T
c.717+341A>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84534107
chr1:84534108 G
G
 A
A
 1 a0001c0001t0009g0229
a0001c0001t0009g0229
 1 NA18940.hp1
NA18940.hp1
 intron_variant MODIFIER c.717+342G>A
c.717+342G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84534108
chr1:84534109 A
A
 T
T
 1 a0001c0001t0009g0229
a0001c0001t0009g0229
 1 NA18940.hp1
NA18940.hp1
 intron_variant MODIFIER c.717+343A>T
c.717+343A>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84534109
chr1:84534113 G
G
 T
T
 1 a0001c0001t0009g0229
a0001c0001t0009g0229
 1 NA18940.hp1
NA18940.hp1
 intron_variant MODIFIER c.717+347G>T
c.717+347G>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84534113
chr1:84534115 A
A
 G
G
 1 a0001c0001t0009g0229
a0001c0001t0009g0229
 1 NA18940.hp1
NA18940.hp1
 intron_variant MODIFIER c.717+349A>G
c.717+349A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84534115
chr1:84534117 T
T
 G
G
 1 a0001c0001t0009g0229
a0001c0001t0009g0229
 1 NA18940.hp1
NA18940.hp1
 intron_variant MODIFIER c.717+351T>G
c.717+351T>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84534117
chr1:84534120 A
A
 G
G
 1 a0001c0001t0009g0229
a0001c0001t0009g0229
 1 NA18940.hp1
NA18940.hp1
 intron_variant MODIFIER c.717+354A>G
c.717+354A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84534120
chr1:84534122 A
A
 T
T
 1 a0001c0001t0009g0229
a0001c0001t0009g0229
 1 NA18940.hp1
NA18940.hp1
 intron_variant MODIFIER c.717+356A>T
c.717+356A>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84534122
chr1:84534214 G
G
 C
C
 4 a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
others(1): Show 
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
 5 HG02723.hp2
HG02809.hp2
HG03130.hp1
others(2): Show 
HG02723.hp2
HG02809.hp2
HG03130.hp1
NA19043.hp1
NA19240.hp2
 intron_variant MODIFIER c.717+448G>C
c.717+448G>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84534214
chr1:84534229 T
T
 A
A
 2 a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0003g0262
a0002c0002t0003g0263
 2 HG01168.hp1
HG01993.hp1
HG01168.hp1
HG01993.hp1
 intron_variant MODIFIER c.717+463T>A
c.717+463T>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84534229
chr1:84534584 G
G
 A
A
 64 a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
others(61): Show 
a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 78 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(75): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG02055.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02258.hp1
HG02293.hp2
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02809.hp1
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03486.hp1
HG03516.hp2
HG03540.hp1
HG03834.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18988.hp2
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19089.hp2
NA19240.hp1
NA20300.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.717+818G>A
c.717+818G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84534584
chr1:84534607 ACTAC
ACTAC
 A
A
 18 a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
others(15): Show 
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 25 HG01891.hp2
HG02055.hp1
HG02257.hp2
others(22): Show 
HG01891.hp2
HG02055.hp1
HG02257.hp2
HG02258.hp1
HG02451.hp2
HG02486.hp1
HG02622.hp2
HG02630.hp2
HG02647.hp1
HG02723.hp1
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02922.hp1
HG02965.hp2
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03486.hp1
HG06807.hp2
NA18522.hp2
NA19240.hp1
 intron_variant MODIFIER c.717+849_717+852del
others(4): Show 
c.717+849_717+852delCCTA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 INFO_REALIGN_3_PRIME chr1 84534607
chr1:84534701 T
T
 G
G
 26 a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
others(23): Show 
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0009g0013
a0002c0002t0002g0019
 32 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(29): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG01192.hp2
HG01346.hp1
HG01943.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02293.hp2
HG02572.hp2
HG02622.hp1
HG02717.hp2
HG02809.hp1
HG03195.hp2
HG03834.hp1
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18948.hp1
NA18968.hp1
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19074.hp1
NA19089.hp2
NA20300.hp2
 intron_variant MODIFIER c.717+935T>G
c.717+935T>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84534701
chr1:84534764 C
C
 T
T
 1 a0002c0002t0006g0062
a0002c0002t0006g0062
 1 HG03516.hp1
HG03516.hp1
 intron_variant MODIFIER c.717+998C>T
c.717+998C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84534764
chr1:84534984 T
T
 C
C
 1 a0001c0001t0001g0192
a0001c0001t0001g0192
 1 HG00280.hp2
HG00280.hp2
 intron_variant MODIFIER c.717+1218T>C
c.717+1218T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84534984
chr1:84535170 T
T
 C
C
 5 a0001c0001t0001g0003
a0001c0001t0001g0234
a0001c0001t0001g0240
others(2): Show 
a0001c0001t0001g0003
a0001c0001t0001g0234
a0001c0001t0001g0240
a0001c0001t0001g0241
a0001c0001t0001g0250
 8 HG00544.hp2
NA18945.hp2
NA18968.hp2
others(5): Show 
HG00544.hp2
NA18945.hp2
NA18968.hp2
NA18969.hp1
NA18971.hp2
NA18986.hp1
NA19007.hp1
NA19091.hp2
 intron_variant MODIFIER c.717+1404T>C
c.717+1404T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84535170
chr1:84535343 G
G
 A
A
 68 a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
others(65): Show 
a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 83 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(80): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG02055.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02258.hp1
HG02293.hp2
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03041.hp2
HG03130.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03486.hp1
HG03516.hp2
HG03540.hp1
HG03834.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18988.hp2
NA18989.hp2
NA19004.hp2
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19089.hp2
NA19240.hp1
NA19240.hp2
NA20300.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.717+1577G>A
c.717+1577G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84535343
chr1:84535662 T
T
 C
C
 31 a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
others(28): Show 
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0106
a0002c0002t0012g0082
a0005c0009t0012g0083
a0006c0007t0001g0035
 33 HG00280.hp1
HG00609.hp1
HG00621.hp2
others(30): Show 
HG00280.hp1
HG00609.hp1
HG00621.hp2
HG00639.hp2
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01168.hp1
HG01993.hp1
HG02109.hp1
HG02300.hp1
HG02451.hp1
HG02630.hp1
HG02735.hp2
HG02738.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03471.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG04115.hp2
HG04228.hp1
NA18980.hp1
NA18994.hp1
NA19077.hp1
NA19090.hp1
NA21309.hp2
 intron_variant MODIFIER c.717+1896T>C
c.717+1896T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84535662
chr1:84535743 C
C
 T
T
 4 a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
others(1): Show 
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
 5 HG02723.hp2
HG02809.hp2
HG03130.hp1
others(2): Show 
HG02723.hp2
HG02809.hp2
HG03130.hp1
NA19043.hp1
NA19240.hp2
 intron_variant MODIFIER c.717+1977C>T
c.717+1977C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84535743
chr1:84535887 C
C
 T
T
 64 a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
others(61): Show 
a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 78 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(75): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG02055.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02258.hp1
HG02293.hp2
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02809.hp1
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03486.hp1
HG03516.hp2
HG03540.hp1
HG03834.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18988.hp2
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19089.hp2
NA19240.hp1
NA20300.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.717+2121C>T
c.717+2121C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84535887
chr1:84536082 C
C
 A
A
 2 a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0003t0011g0260
a0001c0003t0011g0261
 2 NA18988.hp2
NA19063.hp1
NA18988.hp2
NA19063.hp1
 intron_variant MODIFIER c.717+2316C>A
c.717+2316C>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84536082
chr1:84536213 C
C
 T
T
 1 a0001c0003t0004g0045
a0001c0003t0004g0045
 1 HG03834.hp1
HG03834.hp1
 intron_variant MODIFIER c.717+2447C>T
c.717+2447C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84536213
chr1:84536221 T
T
 G
G
 1 a0002c0002t0003g0146
a0002c0002t0003g0146
 1 HG01109.hp2
HG01109.hp2
 intron_variant MODIFIER c.717+2455T>G
c.717+2455T>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84536221
chr1:84536266 A
A
 G
G
 1 a0004c0005t0001g0039
a0004c0005t0001g0039
 1 NA19240.hp1
NA19240.hp1
 intron_variant MODIFIER c.717+2500A>G
c.717+2500A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84536266
chr1:84536529 C
C
 T
T
 4 a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
others(1): Show 
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
 5 HG02723.hp2
HG02809.hp2
HG03130.hp1
others(2): Show 
HG02723.hp2
HG02809.hp2
HG03130.hp1
NA19043.hp1
NA19240.hp2
 intron_variant MODIFIER c.717+2763C>T
c.717+2763C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84536529
chr1:84536530 G
G
 A
A
 14 a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
others(11): Show 
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 19 HG01891.hp2
HG02055.hp1
HG02257.hp2
others(16): Show 
HG01891.hp2
HG02055.hp1
HG02257.hp2
HG02451.hp2
HG02486.hp1
HG02622.hp2
HG02647.hp1
HG02723.hp1
HG02818.hp1
HG02922.hp1
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp2
HG03225.hp2
HG03486.hp1
HG06807.hp2
NA18522.hp2
NA19240.hp1
 intron_variant MODIFIER c.717+2764G>A
c.717+2764G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84536530
chr1:84536536 C
C
 T
T
 37 a0001c0003t0004g0050
a0002c0002t0002g0006
a0002c0002t0002g0007
others(34): Show 
a0001c0003t0004g0050
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0128
a0002c0002t0005g0150
a0002c0002t0007g0100
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 43 HG00408.hp1
HG00438.hp1
HG00544.hp1
others(40): Show 
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00673.hp1
HG01099.hp1
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02132.hp2
HG02155.hp1
HG04199.hp2
HG04204.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA19012.hp1
NA19056.hp2
NA19057.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19091.hp1
 intron_variant MODIFIER c.717+2770C>T
c.717+2770C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84536536
chr1:84536645 C
C
 T
T
 25 a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
others(22): Show 
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0009g0013
 30 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(27): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG01192.hp2
HG01346.hp1
HG01943.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02293.hp2
HG02572.hp2
HG02622.hp1
HG02717.hp2
HG02809.hp1
HG03195.hp2
HG03834.hp1
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19089.hp2
NA20300.hp2
 intron_variant MODIFIER c.717+2879C>T
c.717+2879C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84536645
chr1:84536733 C
C
 T
T
 3 a0001c0003t0004g0040
a0003c0004t0001g0015
a0003c0004t0001g0081
a0001c0003t0004g0040
a0003c0004t0001g0015
a0003c0004t0001g0081
 4 HG02055.hp2
HG02895.hp2
HG02897.hp2
others(1): Show 
HG02055.hp2
HG02895.hp2
HG02897.hp2
HG02970.hp1
 intron_variant MODIFIER c.717+2967C>T
c.717+2967C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84536733
chr1:84536876 T
T
 C
C
 44 a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
others(41): Show 
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0128
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0007g0100
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 53 HG00408.hp1
HG00438.hp1
HG00544.hp1
others(50): Show 
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00673.hp1
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01167.hp1
HG01169.hp1
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02132.hp2
HG02145.hp2
HG02155.hp1
HG02258.hp2
HG02280.hp1
HG02572.hp1
HG03041.hp1
HG04199.hp2
HG04204.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA19012.hp1
NA19030.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19091.hp1
 intron_variant MODIFIER c.717+3110T>C
c.717+3110T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84536876
chr1:84536881 CT
CT
 C
C
 252 a0001c0001t0001g0001
a0001c0001t0001g0003
a0001c0001t0001g0008
others(249): Show 
a0001c0001t0001g0001
a0001c0001t0001g0003
a0001c0001t0001g0008
a0001c0001t0001g0009
a0001c0001t0001g0025
a0001c0001t0001g0026
a0001c0001t0001g0060
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0163
a0001c0001t0001g0164
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0170
a0001c0001t0001g0171
a0001c0001t0001g0172
a0001c0001t0001g0173
a0001c0001t0001g0174
a0001c0001t0001g0175
a0001c0001t0001g0176
a0001c0001t0001g0177
a0001c0001t0001g0178
a0001c0001t0001g0179
a0001c0001t0001g0180
a0001c0001t0001g0181
a0001c0001t0001g0182
a0001c0001t0001g0183
a0001c0001t0001g0184
a0001c0001t0001g0185
a0001c0001t0001g0186
a0001c0001t0001g0187
a0001c0001t0001g0188
a0001c0001t0001g0189
a0001c0001t0001g0190
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0204
a0001c0001t0001g0205
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0213
a0001c0001t0001g0214
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0001g0219
a0001c0001t0001g0220
a0001c0001t0001g0221
a0001c0001t0001g0222
a0001c0001t0001g0223
a0001c0001t0001g0224
a0001c0001t0001g0225
a0001c0001t0001g0226
a0001c0001t0001g0227
a0001c0001t0001g0228
a0001c0001t0001g0230
a0001c0001t0001g0231
a0001c0001t0001g0232
a0001c0001t0001g0233
a0001c0001t0001g0234
a0001c0001t0001g0235
a0001c0001t0001g0236
a0001c0001t0001g0237
a0001c0001t0001g0238
a0001c0001t0001g0239
a0001c0001t0001g0240
a0001c0001t0001g0241
a0001c0001t0001g0243
a0001c0001t0001g0244
a0001c0001t0001g0245
a0001c0001t0001g0246
a0001c0001t0001g0247
a0001c0001t0001g0248
a0001c0001t0001g0249
a0001c0001t0001g0250
a0001c0001t0001g0251
a0001c0001t0001g0252
a0001c0001t0001g0256
a0001c0001t0001g0257
a0001c0001t0001g0258
a0001c0001t0001g0259
a0001c0001t0001g0264
a0001c0001t0001g0265
a0001c0001t0001g0266
a0001c0001t0001g0267
a0001c0001t0001g0268
a0001c0001t0001g0269
a0001c0001t0007g0017
a0001c0001t0007g0127
a0001c0001t0013g0165
a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0007c0008t0001g0242
 295 HG00140.hp1
HG00140.hp2
HG00280.hp1
others(292): Show 
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00408.hp1
HG00408.hp2
HG00438.hp2
HG00544.hp1
HG00544.hp2
HG00597.hp1
HG00597.hp2
HG00609.hp1
HG00609.hp2
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00673.hp2
HG00735.hp1
HG00735.hp2
HG00738.hp1
HG00738.hp2
HG00741.hp1
HG00741.hp2
HG01070.hp1
HG01070.hp2
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01099.hp2
HG01106.hp1
HG01106.hp2
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp1
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01261.hp2
HG01346.hp1
HG01346.hp2
HG01361.hp1
HG01361.hp2
HG01496.hp1
HG01496.hp2
HG01515.hp1
HG01517.hp2
HG01891.hp2
HG01943.hp1
HG01943.hp2
HG01975.hp1
HG01975.hp2
HG01993.hp1
HG01993.hp2
HG02015.hp1
HG02015.hp2
HG02040.hp1
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02080.hp2
HG02083.hp1
HG02083.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02148.hp2
HG02155.hp1
HG02155.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02280.hp2
HG02293.hp1
HG02293.hp2
HG02300.hp1
HG02300.hp2
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02647.hp2
HG02698.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp1
HG02735.hp2
HG02738.hp1
HG02738.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG02976.hp1
HG02976.hp2
HG03017.hp1
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03492.hp2
HG03516.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03669.hp1
HG03669.hp2
HG03710.hp1
HG03710.hp2
HG03834.hp1
HG03834.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04204.hp2
HG04228.hp1
HG04228.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18612.hp1
NA18612.hp2
NA18747.hp1
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18942.hp2
NA18944.hp1
NA18944.hp2
NA18945.hp1
NA18945.hp2
NA18946.hp1
NA18946.hp2
NA18948.hp1
NA18948.hp2
NA18950.hp1
NA18950.hp2
NA18951.hp1
NA18951.hp2
NA18952.hp1
NA18952.hp2
NA18954.hp1
NA18954.hp2
NA18955.hp1
NA18955.hp2
NA18957.hp1
NA18957.hp2
NA18961.hp1
NA18961.hp2
NA18962.hp1
NA18962.hp2
NA18965.hp1
NA18965.hp2
NA18967.hp1
NA18967.hp2
NA18968.hp1
NA18968.hp2
NA18969.hp1
NA18969.hp2
NA18971.hp1
NA18971.hp2
NA18975.hp1
NA18975.hp2
NA18979.hp1
NA18979.hp2
NA18980.hp1
NA18980.hp2
NA18983.hp1
NA18983.hp2
NA18986.hp1
NA18986.hp2
NA18987.hp1
NA18987.hp2
NA18988.hp1
NA18988.hp2
NA18989.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18992.hp2
NA18994.hp1
NA18994.hp2
NA19004.hp1
NA19004.hp2
NA19007.hp1
NA19007.hp2
NA19012.hp1
NA19012.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19054.hp2
NA19056.hp1
NA19056.hp2
NA19057.hp1
NA19057.hp2
NA19058.hp1
NA19058.hp2
NA19063.hp1
NA19063.hp2
NA19065.hp1
NA19065.hp2
NA19066.hp1
NA19066.hp2
NA19068.hp1
NA19068.hp2
NA19072.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19075.hp2
NA19077.hp1
NA19077.hp2
NA19079.hp1
NA19079.hp2
NA19083.hp1
NA19083.hp2
NA19084.hp1
NA19084.hp2
NA19089.hp1
NA19089.hp2
NA19090.hp1
NA19090.hp2
NA19091.hp1
NA19091.hp2
NA19240.hp1
NA19240.hp2
NA20300.hp1
NA20300.hp2
NA20805.hp1
NA20805.hp2
NA21309.hp1
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.717+3131delT
c.717+3131delT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 INFO_REALIGN_3_PRIME chr1 84536881
chr1:84536881 CTTTTTTT
others(1): Show 
CTTTTTTTT
 C
C
 6 a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
others(3): Show 
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
 6 HG01109.hp1
HG01261.hp1
HG01515.hp2
others(3): Show 
HG01109.hp1
HG01261.hp1
HG01515.hp2
HG01517.hp1
HG02040.hp2
HG03017.hp2
 intron_variant MODIFIER c.717+3124_717+3131d
others(10): Show 
c.717+3124_717+3131delTTTTTTTT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 INFO_REALIGN_3_PRIME chr1 84536881
chr1:84537002 T
T
 C
C
 18 a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
others(15): Show 
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 25 HG01891.hp2
HG02055.hp1
HG02257.hp2
others(22): Show 
HG01891.hp2
HG02055.hp1
HG02257.hp2
HG02258.hp1
HG02451.hp2
HG02486.hp1
HG02622.hp2
HG02630.hp2
HG02647.hp1
HG02723.hp1
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02922.hp1
HG02965.hp2
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03486.hp1
HG06807.hp2
NA18522.hp2
NA19240.hp1
 intron_variant MODIFIER c.717+3236T>C
c.717+3236T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84537002
chr1:84537060 A
A
 G
G
 6 a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
others(3): Show 
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
 6 HG01109.hp1
HG01261.hp1
HG01515.hp2
others(3): Show 
HG01109.hp1
HG01261.hp1
HG01515.hp2
HG01517.hp1
HG02040.hp2
HG03017.hp2
 intron_variant MODIFIER c.717+3294A>G
c.717+3294A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84537060
chr1:84537108 G
G
 A
A
 1 a0001c0003t0004g0054
a0001c0003t0004g0054
 1 HG02148.hp2
HG02148.hp2
 intron_variant MODIFIER c.717+3342G>A
c.717+3342G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84537108
chr1:84537162 G
G
 A
A
 1 a0003c0004t0001g0073
a0003c0004t0001g0073
 1 HG03209.hp1
HG03209.hp1
 intron_variant MODIFIER c.717+3396G>A
c.717+3396G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84537162
chr1:84537528 A
A
 G
G
 25 a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
others(22): Show 
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0009g0013
 30 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(27): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG01192.hp2
HG01346.hp1
HG01943.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02293.hp2
HG02572.hp2
HG02622.hp1
HG02717.hp2
HG02809.hp1
HG03195.hp2
HG03834.hp1
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19089.hp2
NA20300.hp2
 intron_variant MODIFIER c.717+3762A>G
c.717+3762A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84537528
chr1:84537885 T
T
 C
C
 149 a0001c0003t0001g0075
a0001c0003t0001g0088
a0001c0003t0001g0089
others(146): Show 
a0001c0003t0001g0075
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 175 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(172): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01192.hp2
HG01261.hp1
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01515.hp2
HG01517.hp1
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG01993.hp1
HG02015.hp1
HG02040.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp2
HG02155.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp2
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04184.hp1
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18944.hp1
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18968.hp1
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18988.hp2
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19004.hp2
NA19012.hp1
NA19030.hp1
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19056.hp2
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19090.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
NA20805.hp1
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.717+4119T>C
c.717+4119T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84537885
chr1:84537940 T
T
 C
C
 9 a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
others(6): Show 
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0038
 13 HG01891.hp2
HG02257.hp2
HG02451.hp2
others(10): Show 
HG01891.hp2
HG02257.hp2
HG02451.hp2
HG02622.hp2
HG02723.hp1
HG02818.hp1
HG02922.hp1
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp2
HG03486.hp1
NA18522.hp2
 intron_variant MODIFIER c.717+4174T>C
c.717+4174T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84537940
chr1:84538038 T
T
 A
A
 9 a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
others(6): Show 
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
 12 HG01070.hp1
HG01071.hp1
HG01081.hp1
others(9): Show 
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01167.hp1
HG01169.hp1
HG02145.hp2
HG02258.hp2
HG02280.hp1
HG02572.hp1
HG03041.hp1
NA19030.hp1
 intron_variant MODIFIER c.717+4272T>A
c.717+4272T>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84538038
chr1:84538054 A
A
 G
G
 69 a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
others(66): Show 
a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0019
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 85 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(82): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG02055.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02258.hp1
HG02293.hp2
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03041.hp2
HG03130.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03486.hp1
HG03516.hp2
HG03540.hp1
HG03834.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18948.hp1
NA18968.hp1
NA18988.hp2
NA18989.hp2
NA19004.hp2
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19074.hp1
NA19089.hp2
NA19240.hp1
NA19240.hp2
NA20300.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.717+4288A>G
c.717+4288A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84538054
chr1:84538102 G
G
 A
A
 3 a0001c0003t0001g0088
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0088
a0001c0003t0001g0091
a0001c0003t0001g0092
 3 HG01261.hp1
HG02040.hp2
HG03017.hp2
HG01261.hp1
HG02040.hp2
HG03017.hp2
 intron_variant MODIFIER c.717+4336G>A
c.717+4336G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84538102
chr1:84538239 A
A
 G
G
 18 a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
others(15): Show 
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 25 HG01891.hp2
HG02055.hp1
HG02257.hp2
others(22): Show 
HG01891.hp2
HG02055.hp1
HG02257.hp2
HG02258.hp1
HG02451.hp2
HG02486.hp1
HG02622.hp2
HG02630.hp2
HG02647.hp1
HG02723.hp1
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02922.hp1
HG02965.hp2
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03486.hp1
HG06807.hp2
NA18522.hp2
NA19240.hp1
 intron_variant MODIFIER c.717+4473A>G
c.717+4473A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84538239
chr1:84538335 C
C
 T
T
 2 a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0005g0154
a0002c0002t0005g0155
 2 HG02145.hp2
HG02258.hp2
HG02145.hp2
HG02258.hp2
 intron_variant MODIFIER c.717+4569C>T
c.717+4569C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84538335
chr1:84538487 G
G
 T
T
 1 a0001c0001t0001g0237
a0001c0001t0001g0237
 1 HG03669.hp2
HG03669.hp2
 intron_variant MODIFIER c.717+4721G>T
c.717+4721G>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84538487
chr1:84538859 C
C
 G
G
 149 a0001c0003t0001g0075
a0001c0003t0001g0088
a0001c0003t0001g0089
others(146): Show 
a0001c0003t0001g0075
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 175 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(172): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01192.hp2
HG01261.hp1
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01515.hp2
HG01517.hp1
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG01993.hp1
HG02015.hp1
HG02040.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp2
HG02155.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp2
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04184.hp1
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18944.hp1
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18968.hp1
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18988.hp2
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19004.hp2
NA19012.hp1
NA19030.hp1
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19056.hp2
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19090.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
NA20805.hp1
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.717+5093C>G
c.717+5093C>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84538859
chr1:84538974 AT
AT
 A
A
 149 a0001c0003t0001g0075
a0001c0003t0001g0088
a0001c0003t0001g0089
others(146): Show 
a0001c0003t0001g0075
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 175 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(172): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01192.hp2
HG01261.hp1
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01515.hp2
HG01517.hp1
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG01993.hp1
HG02015.hp1
HG02040.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp2
HG02155.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp2
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04184.hp1
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18944.hp1
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18968.hp1
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18988.hp2
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19004.hp2
NA19012.hp1
NA19030.hp1
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19056.hp2
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19090.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
NA20805.hp1
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.717+5215delT
c.717+5215delT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 INFO_REALIGN_3_PRIME chr1 84538974
chr1:84539140 C
C
 T
T
 1 a0001c0003t0003g0102
a0001c0003t0003g0102
 1 HG03195.hp2
HG03195.hp2
 intron_variant MODIFIER c.718-5062C>T
c.718-5062C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84539140
chr1:84539201 C
C
 T
T
 19 a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
others(16): Show 
a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
 21 HG00741.hp2
HG01168.hp2
HG01169.hp2
others(18): Show 
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02698.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.718-5001C>T
c.718-5001C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84539201
chr1:84539202 G
G
 A
A
 15 a0001c0001t0001g0176
a0004c0005t0001g0005
a0004c0005t0001g0010
others(12): Show 
a0001c0001t0001g0176
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 20 HG00673.hp2
HG01891.hp2
HG02055.hp1
others(17): Show 
HG00673.hp2
HG01891.hp2
HG02055.hp1
HG02257.hp2
HG02451.hp2
HG02486.hp1
HG02622.hp2
HG02647.hp1
HG02723.hp1
HG02818.hp1
HG02922.hp1
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp2
HG03225.hp2
HG03486.hp1
HG06807.hp2
NA18522.hp2
NA19240.hp1
 intron_variant MODIFIER c.718-5000G>A
c.718-5000G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84539202
chr1:84539393 A
A
 C
C
 116 a0001c0001t0001g0001
a0001c0001t0001g0003
a0001c0001t0001g0008
others(113): Show 
a0001c0001t0001g0001
a0001c0001t0001g0003
a0001c0001t0001g0008
a0001c0001t0001g0009
a0001c0001t0001g0025
a0001c0001t0001g0026
a0001c0001t0001g0060
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0163
a0001c0001t0001g0164
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0170
a0001c0001t0001g0171
a0001c0001t0001g0172
a0001c0001t0001g0173
a0001c0001t0001g0174
a0001c0001t0001g0175
a0001c0001t0001g0176
a0001c0001t0001g0177
a0001c0001t0001g0178
a0001c0001t0001g0179
a0001c0001t0001g0180
a0001c0001t0001g0181
a0001c0001t0001g0182
a0001c0001t0001g0183
a0001c0001t0001g0184
a0001c0001t0001g0185
a0001c0001t0001g0186
a0001c0001t0001g0187
a0001c0001t0001g0188
a0001c0001t0001g0189
a0001c0001t0001g0190
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0204
a0001c0001t0001g0205
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0213
a0001c0001t0001g0214
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0001g0219
a0001c0001t0001g0220
a0001c0001t0001g0221
a0001c0001t0001g0222
a0001c0001t0001g0223
a0001c0001t0001g0224
a0001c0001t0001g0225
a0001c0001t0001g0226
a0001c0001t0001g0227
a0001c0001t0001g0228
a0001c0001t0001g0230
a0001c0001t0001g0231
a0001c0001t0001g0232
a0001c0001t0001g0233
a0001c0001t0001g0234
a0001c0001t0001g0235
a0001c0001t0001g0236
a0001c0001t0001g0237
a0001c0001t0001g0238
a0001c0001t0001g0239
a0001c0001t0001g0240
a0001c0001t0001g0241
a0001c0001t0001g0243
a0001c0001t0001g0244
a0001c0001t0001g0245
a0001c0001t0001g0246
a0001c0001t0001g0247
a0001c0001t0001g0248
a0001c0001t0001g0249
a0001c0001t0001g0250
a0001c0001t0001g0251
a0001c0001t0001g0252
a0001c0001t0001g0256
a0001c0001t0001g0257
a0001c0001t0001g0258
a0001c0001t0001g0259
a0001c0001t0001g0264
a0001c0001t0001g0265
a0001c0001t0001g0266
a0001c0001t0001g0267
a0001c0001t0001g0268
a0001c0001t0001g0269
a0001c0001t0007g0017
a0001c0001t0007g0127
a0001c0001t0009g0229
a0001c0001t0013g0165
a0007c0008t0001g0242
 133 HG00140.hp2
HG00280.hp2
HG00408.hp2
others(130): Show 
HG00140.hp2
HG00280.hp2
HG00408.hp2
HG00438.hp2
HG00544.hp2
HG00597.hp1
HG00609.hp2
HG00642.hp1
HG00642.hp2
HG00673.hp2
HG00735.hp2
HG00738.hp1
HG00738.hp2
HG00741.hp1
HG01070.hp2
HG01071.hp2
HG01081.hp2
HG01099.hp2
HG01106.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp1
HG01255.hp1
HG01255.hp2
HG01261.hp2
HG01346.hp2
HG01361.hp1
HG01496.hp1
HG01515.hp1
HG01517.hp2
HG01943.hp2
HG01975.hp2
HG01993.hp2
HG02015.hp2
HG02040.hp1
HG02080.hp2
HG02083.hp2
HG02109.hp2
HG02132.hp1
HG02148.hp1
HG02155.hp2
HG02257.hp1
HG02280.hp2
HG02293.hp1
HG02300.hp2
HG02486.hp2
HG02647.hp2
HG02698.hp2
HG02717.hp1
HG02735.hp1
HG02738.hp2
HG02886.hp1
HG02897.hp1
HG02970.hp2
HG03017.hp1
HG03130.hp2
HG03453.hp1
HG03453.hp2
HG03491.hp2
HG03492.hp2
HG03540.hp2
HG03579.hp1
HG03669.hp2
HG03710.hp1
HG03834.hp2
HG04115.hp1
HG04184.hp2
HG04204.hp2
HG04228.hp2
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18940.hp1
NA18942.hp2
NA18944.hp2
NA18945.hp2
NA18946.hp1
NA18948.hp2
NA18950.hp2
NA18951.hp1
NA18952.hp2
NA18954.hp1
NA18955.hp2
NA18957.hp2
NA18961.hp2
NA18962.hp2
NA18965.hp2
NA18967.hp1
NA18968.hp2
NA18969.hp1
NA18969.hp2
NA18971.hp1
NA18971.hp2
NA18975.hp1
NA18975.hp2
NA18979.hp1
NA18980.hp2
NA18983.hp2
NA18986.hp1
NA18987.hp2
NA18988.hp1
NA18989.hp1
NA18990.hp2
NA18992.hp2
NA18994.hp2
NA19004.hp1
NA19007.hp1
NA19007.hp2
NA19012.hp2
NA19030.hp2
NA19054.hp2
NA19056.hp1
NA19057.hp1
NA19058.hp1
NA19063.hp2
NA19065.hp1
NA19065.hp2
NA19066.hp1
NA19066.hp2
NA19068.hp1
NA19068.hp2
NA19072.hp1
NA19075.hp2
NA19077.hp2
NA19079.hp2
NA19083.hp1
NA19084.hp2
NA19089.hp1
NA19090.hp2
NA19091.hp2
NA20300.hp1
NA20805.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.718-4809A>C
c.718-4809A>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84539393
chr1:84539505 C
C
 G
G
 74 a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
others(71): Show 
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0009g0013
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0106
a0002c0002t0012g0082
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 87 HG00140.hp1
HG00280.hp1
HG00597.hp2
others(84): Show 
HG00140.hp1
HG00280.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01168.hp1
HG01192.hp2
HG01346.hp1
HG01891.hp2
HG01943.hp1
HG01993.hp1
HG02055.hp1
HG02055.hp2
HG02109.hp1
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02647.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02886.hp2
HG02922.hp1
HG02976.hp1
HG02976.hp2
HG03041.hp2
HG03130.hp1
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp2
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04228.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18980.hp1
NA18989.hp2
NA18994.hp1
NA19004.hp2
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19077.hp1
NA19089.hp2
NA19090.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
NA21309.hp2
 intron_variant MODIFIER c.718-4697C>G
c.718-4697C>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84539505
chr1:84539524 A
A
 G
G
 1 a0002c0002t0002g0124
a0002c0002t0002g0124
 1 NA19083.hp2
NA19083.hp2
 intron_variant MODIFIER c.718-4678A>G
c.718-4678A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84539524
chr1:84539653 T
T
 G
G
 24 a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
others(21): Show 
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0009g0013
 29 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(26): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG01192.hp2
HG01346.hp1
HG01943.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02293.hp2
HG02572.hp2
HG02622.hp1
HG02717.hp2
HG02809.hp1
HG03834.hp1
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19089.hp2
NA20300.hp2
 intron_variant MODIFIER c.718-4549T>G
c.718-4549T>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84539653
chr1:84539899 T
T
 C
C
 23 a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
others(20): Show 
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0009g0013
 28 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(25): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG01192.hp2
HG01346.hp1
HG01943.hp1
HG02145.hp1
HG02148.hp2
HG02293.hp2
HG02572.hp2
HG02622.hp1
HG02717.hp2
HG02809.hp1
HG03834.hp1
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19089.hp2
NA20300.hp2
 intron_variant MODIFIER c.718-4303T>C
c.718-4303T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84539899
chr1:84539922 A
A
 G
G
 1 a0001c0001t0001g0241
a0001c0001t0001g0241
 1 NA18969.hp1
NA18969.hp1
 intron_variant MODIFIER c.718-4280A>G
c.718-4280A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84539922
chr1:84540088 T
T
 C
C
 4 a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
others(1): Show 
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0003c0004t0006g0068
 6 HG02258.hp1
HG02630.hp2
HG02818.hp2
others(3): Show 
HG02258.hp1
HG02630.hp2
HG02818.hp2
HG02895.hp1
HG02965.hp2
HG03225.hp1
 intron_variant MODIFIER c.718-4114T>C
c.718-4114T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84540088
chr1:84540224 T
T
 G
G
 1 a0001c0001t0001g0193
a0001c0001t0001g0193
 1 HG04204.hp2
HG04204.hp2
 intron_variant MODIFIER c.718-3978T>G
c.718-3978T>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84540224
chr1:84540380 C
C
 T
T
 265 a0001c0001t0001g0001
a0001c0001t0001g0003
a0001c0001t0001g0008
others(262): Show 
a0001c0001t0001g0001
a0001c0001t0001g0003
a0001c0001t0001g0008
a0001c0001t0001g0009
a0001c0001t0001g0025
a0001c0001t0001g0026
a0001c0001t0001g0060
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0163
a0001c0001t0001g0164
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0170
a0001c0001t0001g0171
a0001c0001t0001g0172
a0001c0001t0001g0173
a0001c0001t0001g0174
a0001c0001t0001g0175
a0001c0001t0001g0176
a0001c0001t0001g0177
a0001c0001t0001g0178
a0001c0001t0001g0179
a0001c0001t0001g0180
a0001c0001t0001g0181
a0001c0001t0001g0182
a0001c0001t0001g0183
a0001c0001t0001g0184
a0001c0001t0001g0185
a0001c0001t0001g0186
a0001c0001t0001g0187
a0001c0001t0001g0188
a0001c0001t0001g0189
a0001c0001t0001g0190
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0204
a0001c0001t0001g0205
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0213
a0001c0001t0001g0214
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0001g0219
a0001c0001t0001g0220
a0001c0001t0001g0221
a0001c0001t0001g0222
a0001c0001t0001g0223
a0001c0001t0001g0224
a0001c0001t0001g0225
a0001c0001t0001g0226
a0001c0001t0001g0227
a0001c0001t0001g0228
a0001c0001t0001g0230
a0001c0001t0001g0231
a0001c0001t0001g0232
a0001c0001t0001g0233
a0001c0001t0001g0234
a0001c0001t0001g0235
a0001c0001t0001g0236
a0001c0001t0001g0237
a0001c0001t0001g0238
a0001c0001t0001g0239
a0001c0001t0001g0240
a0001c0001t0001g0241
a0001c0001t0001g0243
a0001c0001t0001g0244
a0001c0001t0001g0245
a0001c0001t0001g0246
a0001c0001t0001g0247
a0001c0001t0001g0248
a0001c0001t0001g0249
a0001c0001t0001g0250
a0001c0001t0001g0251
a0001c0001t0001g0252
a0001c0001t0001g0256
a0001c0001t0001g0257
a0001c0001t0001g0258
a0001c0001t0001g0259
a0001c0001t0001g0264
a0001c0001t0001g0265
a0001c0001t0001g0266
a0001c0001t0001g0267
a0001c0001t0001g0268
a0001c0001t0001g0269
a0001c0001t0007g0017
a0001c0001t0007g0127
a0001c0001t0009g0229
a0001c0001t0013g0165
a0001c0003t0001g0075
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
a0007c0008t0001g0242
 308 HG00140.hp1
HG00140.hp2
HG00280.hp1
others(305): Show 
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00408.hp1
HG00408.hp2
HG00438.hp1
HG00438.hp2
HG00544.hp1
HG00544.hp2
HG00597.hp1
HG00597.hp2
HG00609.hp1
HG00609.hp2
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00673.hp2
HG00735.hp1
HG00735.hp2
HG00738.hp1
HG00738.hp2
HG00741.hp1
HG00741.hp2
HG01070.hp1
HG01070.hp2
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01099.hp2
HG01106.hp1
HG01106.hp2
HG01109.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp1
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01261.hp1
HG01261.hp2
HG01346.hp1
HG01346.hp2
HG01361.hp1
HG01361.hp2
HG01496.hp1
HG01496.hp2
HG01515.hp1
HG01515.hp2
HG01517.hp1
HG01517.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01943.hp2
HG01975.hp1
HG01975.hp2
HG01993.hp1
HG01993.hp2
HG02015.hp1
HG02015.hp2
HG02040.hp1
HG02040.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02080.hp2
HG02083.hp1
HG02083.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02148.hp2
HG02155.hp1
HG02155.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02280.hp2
HG02293.hp1
HG02293.hp2
HG02300.hp1
HG02300.hp2
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02647.hp2
HG02698.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp1
HG02735.hp2
HG02738.hp1
HG02738.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG02976.hp1
HG02976.hp2
HG03017.hp1
HG03017.hp2
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03492.hp2
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03669.hp1
HG03669.hp2
HG03710.hp1
HG03710.hp2
HG03834.hp1
HG03834.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04204.hp2
HG04228.hp1
HG04228.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18612.hp1
NA18612.hp2
NA18747.hp1
NA18747.hp2
NA18940.hp1
NA18940.hp2
NA18942.hp1
NA18942.hp2
NA18944.hp1
NA18944.hp2
NA18945.hp1
NA18945.hp2
NA18946.hp1
NA18946.hp2
NA18948.hp1
NA18948.hp2
NA18950.hp1
NA18950.hp2
NA18951.hp1
NA18951.hp2
NA18952.hp1
NA18952.hp2
NA18954.hp1
NA18954.hp2
NA18955.hp1
NA18955.hp2
NA18957.hp1
NA18957.hp2
NA18961.hp1
NA18961.hp2
NA18962.hp1
NA18962.hp2
NA18965.hp1
NA18965.hp2
NA18967.hp1
NA18967.hp2
NA18968.hp1
NA18968.hp2
NA18969.hp1
NA18969.hp2
NA18971.hp1
NA18971.hp2
NA18975.hp1
NA18975.hp2
NA18979.hp1
NA18979.hp2
NA18980.hp1
NA18980.hp2
NA18983.hp1
NA18983.hp2
NA18986.hp1
NA18986.hp2
NA18987.hp1
NA18987.hp2
NA18988.hp1
NA18988.hp2
NA18989.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18992.hp2
NA18994.hp1
NA18994.hp2
NA19004.hp1
NA19004.hp2
NA19007.hp1
NA19007.hp2
NA19012.hp1
NA19012.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19054.hp2
NA19056.hp1
NA19056.hp2
NA19057.hp1
NA19057.hp2
NA19058.hp1
NA19058.hp2
NA19063.hp1
NA19063.hp2
NA19065.hp1
NA19065.hp2
NA19066.hp1
NA19066.hp2
NA19068.hp1
NA19068.hp2
NA19072.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19075.hp2
NA19077.hp1
NA19077.hp2
NA19079.hp1
NA19079.hp2
NA19083.hp1
NA19083.hp2
NA19084.hp1
NA19084.hp2
NA19089.hp1
NA19089.hp2
NA19090.hp1
NA19090.hp2
NA19091.hp1
NA19091.hp2
NA19240.hp1
NA19240.hp2
NA20300.hp1
NA20300.hp2
NA20805.hp1
NA20805.hp2
NA21309.hp1
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.718-3822C>T
c.718-3822C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84540380
chr1:84540383 C
C
 T
T
 2 a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0003t0011g0260
a0001c0003t0011g0261
 2 NA18988.hp2
NA19063.hp1
NA18988.hp2
NA19063.hp1
 intron_variant MODIFIER c.718-3819C>T
c.718-3819C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84540383
chr1:84540393 T
T
 C
C
 1 a0002c0002t0006g0084
a0002c0002t0006g0084
 1 HG02630.hp1
HG02630.hp1
 intron_variant MODIFIER c.718-3809T>C
c.718-3809T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84540393
chr1:84540399 T
T
 G
G
 35 a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
others(32): Show 
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0128
a0002c0002t0007g0100
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 41 HG00408.hp1
HG00438.hp1
HG00544.hp1
others(38): Show 
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00673.hp1
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02132.hp2
HG02155.hp1
HG04199.hp2
HG04204.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA19012.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19091.hp1
 intron_variant MODIFIER c.718-3803T>G
c.718-3803T>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84540399
chr1:84540428 T
T
 A
A
 1 a0001c0003t0004g0040
a0001c0003t0004g0040
 1 HG02055.hp2
HG02055.hp2
 intron_variant MODIFIER c.718-3774T>A
c.718-3774T>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84540428
chr1:84540561 A
A
 G
G
 3 a0002c0002t0007g0100
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0100
a0002c0002t0007g0129
a0002c0002t0007g0130
 3 NA18954.hp2
NA18962.hp1
NA18986.hp2
NA18954.hp2
NA18962.hp1
NA18986.hp2
 intron_variant MODIFIER c.718-3641A>G
c.718-3641A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84540561
chr1:84540565 T
T
 C
C
 2 a0001c0001t0001g0227
a0001c0001t0001g0228
a0001c0001t0001g0227
a0001c0001t0001g0228
 2 HG01081.hp2
HG01106.hp2
HG01081.hp2
HG01106.hp2
 intron_variant MODIFIER c.718-3637T>C
c.718-3637T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84540565
chr1:84540587 C
C
 T
T
 1 a0001c0001t0001g0180
a0001c0001t0001g0180
 1 NA18975.hp2
NA18975.hp2
 intron_variant MODIFIER c.718-3615C>T
c.718-3615C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84540587
chr1:84540669 A
A
 G
G
 143 a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
others(140): Show 
a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 169 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(166): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG01993.hp1
HG02015.hp1
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp2
HG02155.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04184.hp1
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18944.hp1
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18968.hp1
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18988.hp2
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19004.hp2
NA19012.hp1
NA19030.hp1
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19056.hp2
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19090.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
NA20805.hp1
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.718-3533A>G
c.718-3533A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84540669
chr1:84540898 G
G
 C
C
 265 a0001c0001t0001g0001
a0001c0001t0001g0003
a0001c0001t0001g0008
others(262): Show 
a0001c0001t0001g0001
a0001c0001t0001g0003
a0001c0001t0001g0008
a0001c0001t0001g0009
a0001c0001t0001g0025
a0001c0001t0001g0026
a0001c0001t0001g0060
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0163
a0001c0001t0001g0164
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0170
a0001c0001t0001g0171
a0001c0001t0001g0172
a0001c0001t0001g0173
a0001c0001t0001g0174
a0001c0001t0001g0175
a0001c0001t0001g0176
a0001c0001t0001g0177
a0001c0001t0001g0178
a0001c0001t0001g0179
a0001c0001t0001g0180
a0001c0001t0001g0181
a0001c0001t0001g0182
a0001c0001t0001g0183
a0001c0001t0001g0184
a0001c0001t0001g0185
a0001c0001t0001g0186
a0001c0001t0001g0187
a0001c0001t0001g0188
a0001c0001t0001g0189
a0001c0001t0001g0190
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0204
a0001c0001t0001g0205
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0213
a0001c0001t0001g0214
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0001g0219
a0001c0001t0001g0220
a0001c0001t0001g0221
a0001c0001t0001g0222
a0001c0001t0001g0223
a0001c0001t0001g0224
a0001c0001t0001g0225
a0001c0001t0001g0226
a0001c0001t0001g0227
a0001c0001t0001g0228
a0001c0001t0001g0230
a0001c0001t0001g0231
a0001c0001t0001g0232
a0001c0001t0001g0233
a0001c0001t0001g0234
a0001c0001t0001g0235
a0001c0001t0001g0236
a0001c0001t0001g0237
a0001c0001t0001g0238
a0001c0001t0001g0239
a0001c0001t0001g0240
a0001c0001t0001g0241
a0001c0001t0001g0243
a0001c0001t0001g0244
a0001c0001t0001g0245
a0001c0001t0001g0246
a0001c0001t0001g0247
a0001c0001t0001g0248
a0001c0001t0001g0249
a0001c0001t0001g0250
a0001c0001t0001g0251
a0001c0001t0001g0252
a0001c0001t0001g0256
a0001c0001t0001g0257
a0001c0001t0001g0258
a0001c0001t0001g0259
a0001c0001t0001g0264
a0001c0001t0001g0265
a0001c0001t0001g0266
a0001c0001t0001g0267
a0001c0001t0001g0268
a0001c0001t0001g0269
a0001c0001t0007g0017
a0001c0001t0007g0127
a0001c0001t0009g0229
a0001c0001t0013g0165
a0001c0003t0001g0075
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
a0007c0008t0001g0242
 308 HG00140.hp1
HG00140.hp2
HG00280.hp1
others(305): Show 
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00408.hp1
HG00408.hp2
HG00438.hp1
HG00438.hp2
HG00544.hp1
HG00544.hp2
HG00597.hp1
HG00597.hp2
HG00609.hp1
HG00609.hp2
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00673.hp2
HG00735.hp1
HG00735.hp2
HG00738.hp1
HG00738.hp2
HG00741.hp1
HG00741.hp2
HG01070.hp1
HG01070.hp2
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01099.hp2
HG01106.hp1
HG01106.hp2
HG01109.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp1
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01261.hp1
HG01261.hp2
HG01346.hp1
HG01346.hp2
HG01361.hp1
HG01361.hp2
HG01496.hp1
HG01496.hp2
HG01515.hp1
HG01515.hp2
HG01517.hp1
HG01517.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01943.hp2
HG01975.hp1
HG01975.hp2
HG01993.hp1
HG01993.hp2
HG02015.hp1
HG02015.hp2
HG02040.hp1
HG02040.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02080.hp2
HG02083.hp1
HG02083.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02148.hp2
HG02155.hp1
HG02155.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02280.hp2
HG02293.hp1
HG02293.hp2
HG02300.hp1
HG02300.hp2
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02647.hp2
HG02698.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp1
HG02735.hp2
HG02738.hp1
HG02738.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG02976.hp1
HG02976.hp2
HG03017.hp1
HG03017.hp2
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03492.hp2
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03669.hp1
HG03669.hp2
HG03710.hp1
HG03710.hp2
HG03834.hp1
HG03834.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04204.hp2
HG04228.hp1
HG04228.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18612.hp1
NA18612.hp2
NA18747.hp1
NA18747.hp2
NA18940.hp1
NA18940.hp2
NA18942.hp1
NA18942.hp2
NA18944.hp1
NA18944.hp2
NA18945.hp1
NA18945.hp2
NA18946.hp1
NA18946.hp2
NA18948.hp1
NA18948.hp2
NA18950.hp1
NA18950.hp2
NA18951.hp1
NA18951.hp2
NA18952.hp1
NA18952.hp2
NA18954.hp1
NA18954.hp2
NA18955.hp1
NA18955.hp2
NA18957.hp1
NA18957.hp2
NA18961.hp1
NA18961.hp2
NA18962.hp1
NA18962.hp2
NA18965.hp1
NA18965.hp2
NA18967.hp1
NA18967.hp2
NA18968.hp1
NA18968.hp2
NA18969.hp1
NA18969.hp2
NA18971.hp1
NA18971.hp2
NA18975.hp1
NA18975.hp2
NA18979.hp1
NA18979.hp2
NA18980.hp1
NA18980.hp2
NA18983.hp1
NA18983.hp2
NA18986.hp1
NA18986.hp2
NA18987.hp1
NA18987.hp2
NA18988.hp1
NA18988.hp2
NA18989.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18992.hp2
NA18994.hp1
NA18994.hp2
NA19004.hp1
NA19004.hp2
NA19007.hp1
NA19007.hp2
NA19012.hp1
NA19012.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19054.hp2
NA19056.hp1
NA19056.hp2
NA19057.hp1
NA19057.hp2
NA19058.hp1
NA19058.hp2
NA19063.hp1
NA19063.hp2
NA19065.hp1
NA19065.hp2
NA19066.hp1
NA19066.hp2
NA19068.hp1
NA19068.hp2
NA19072.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19075.hp2
NA19077.hp1
NA19077.hp2
NA19079.hp1
NA19079.hp2
NA19083.hp1
NA19083.hp2
NA19084.hp1
NA19084.hp2
NA19089.hp1
NA19089.hp2
NA19090.hp1
NA19090.hp2
NA19091.hp1
NA19091.hp2
NA19240.hp1
NA19240.hp2
NA20300.hp1
NA20300.hp2
NA20805.hp1
NA20805.hp2
NA21309.hp1
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.718-3304G>C
c.718-3304G>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84540898
chr1:84541309 ATTGT
ATTGT
 A
A
 39 a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
others(36): Show 
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0009g0013
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 49 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(46): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG01192.hp2
HG01346.hp1
HG01891.hp2
HG01943.hp1
HG02055.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02293.hp2
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02647.hp1
HG02717.hp2
HG02723.hp1
HG02809.hp1
HG02818.hp1
HG02922.hp1
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03195.hp2
HG03209.hp2
HG03225.hp2
HG03486.hp1
HG03834.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19089.hp2
NA19240.hp1
NA20300.hp2
 intron_variant MODIFIER c.718-2890_718-2887d
others(6): Show 
c.718-2890_718-2887delGTTT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 INFO_REALIGN_3_PRIME chr1 84541309
chr1:84541387 T
T
 C
C
 14 a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
others(11): Show 
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 19 HG01891.hp2
HG02055.hp1
HG02257.hp2
others(16): Show 
HG01891.hp2
HG02055.hp1
HG02257.hp2
HG02451.hp2
HG02486.hp1
HG02622.hp2
HG02647.hp1
HG02723.hp1
HG02818.hp1
HG02922.hp1
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp2
HG03225.hp2
HG03486.hp1
HG06807.hp2
NA18522.hp2
NA19240.hp1
 intron_variant MODIFIER c.718-2815T>C
c.718-2815T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84541387
chr1:84541430 T
T
 TGGCTCCT
others(159): Show 
TGGCTCCTTTTATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTAAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTGGC
ACAATCTCGGCTCACTGCAAGCTCCGCCTCCGGGGTTCACGCCATTCTCC
TGCCTCAGCCTCCCAAG
 1 a0001c0003t0003g0102
a0001c0003t0003g0102
 1 HG03195.hp2
HG03195.hp2
 intron_variant MODIFIER c.718-2756_718-2755i
others(168): Show 
c.718-2756_718-2755insTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTAAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCA
GTGGCACAATCTCGGCTCACTGCAAGCTCCGCCTCCGGGGTTCACGCCAT
TCTCCTGCCTCAGCCTCCCAAGGGCTCCTTTTATTTCT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 INFO_REALIGN_3_PRIME chr1 84541430
chr1:84541706 C
C
 A
A
 2 a0002c0002t0007g0106
a0006c0007t0001g0035
a0002c0002t0007g0106
a0006c0007t0001g0035
 2 HG00639.hp2
HG02109.hp1
HG00639.hp2
HG02109.hp1
 intron_variant MODIFIER c.718-2496C>A
c.718-2496C>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84541706
chr1:84541709 G
G
 A
A
 1 a0001c0001t0001g0247
a0001c0001t0001g0247
 1 HG00597.hp1
HG00597.hp1
 intron_variant MODIFIER c.718-2493G>A
c.718-2493G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84541709
chr1:84541802 G
G
 A
A
 23 a0001c0003t0001g0075
a0001c0003t0006g0004
a0001c0003t0006g0027
others(20): Show 
a0001c0003t0001g0075
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
 27 HG00741.hp2
HG01168.hp2
HG01169.hp2
others(24): Show 
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02258.hp1
HG02630.hp2
HG02698.hp1
HG02818.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG03209.hp1
HG03225.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.718-2400G>A
c.718-2400G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84541802
chr1:84541930 T
T
 C
C
 25 a0001c0003t0001g0075
a0001c0003t0006g0004
a0001c0003t0006g0027
others(22): Show 
a0001c0003t0001g0075
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0011g0260
a0001c0003t0011g0261
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
 29 HG00741.hp2
HG01168.hp2
HG01169.hp2
others(26): Show 
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02258.hp1
HG02630.hp2
HG02698.hp1
HG02818.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG03209.hp1
HG03225.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18988.hp2
NA19063.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.718-2272T>C
c.718-2272T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84541930
chr1:84541934 G
G
 GT
GT
 4 a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
others(1): Show 
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
 5 HG02723.hp2
HG02809.hp2
HG03130.hp1
others(2): Show 
HG02723.hp2
HG02809.hp2
HG03130.hp1
NA19043.hp1
NA19240.hp2
 intron_variant MODIFIER c.718-2260dupT
c.718-2260dupT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 INFO_REALIGN_3_PRIME chr1 84541934
chr1:84541939 TTTTG
TTTTG
 T
T
 6 a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
others(3): Show 
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
 6 HG01109.hp1
HG01261.hp1
HG01515.hp2
others(3): Show 
HG01109.hp1
HG01261.hp1
HG01515.hp2
HG01517.hp1
HG02040.hp2
HG03017.hp2
 intron_variant MODIFIER c.718-2251_718-2248d
others(6): Show 
c.718-2251_718-2248delGTTT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 INFO_REALIGN_3_PRIME chr1 84541939
chr1:84541955 T
T
 G
G
 6 a0001c0001t0001g0179
a0001c0001t0001g0194
a0001c0001t0001g0195
others(3): Show 
a0001c0001t0001g0179
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0205
a0006c0007t0001g0035
 6 HG00639.hp2
HG01261.hp2
HG01515.hp1
others(3): Show 
HG00639.hp2
HG01261.hp2
HG01515.hp1
HG02148.hp1
HG03491.hp2
HG03492.hp2
 intron_variant MODIFIER c.718-2247T>G
c.718-2247T>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84541955
chr1:84542001 G
G
 A
A
 64 a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
others(61): Show 
a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 78 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(75): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG02055.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02258.hp1
HG02293.hp2
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02809.hp1
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03486.hp1
HG03516.hp2
HG03540.hp1
HG03834.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18988.hp2
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19089.hp2
NA19240.hp1
NA20300.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.718-2201G>A
c.718-2201G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84542001
chr1:84542008 T
T
 C
C
 68 a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
others(65): Show 
a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 83 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(80): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG02055.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02257.hp2
HG02258.hp1
HG02293.hp2
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG03041.hp2
HG03130.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03486.hp1
HG03516.hp2
HG03540.hp1
HG03834.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18988.hp2
NA18989.hp2
NA19004.hp2
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19089.hp2
NA19240.hp1
NA19240.hp2
NA20300.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.718-2194T>C
c.718-2194T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84542008
chr1:84542035 T
T
 C
C
 9 a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
others(6): Show 
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
 12 HG01070.hp1
HG01071.hp1
HG01081.hp1
others(9): Show 
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01167.hp1
HG01169.hp1
HG02145.hp2
HG02258.hp2
HG02280.hp1
HG02572.hp1
HG03041.hp1
NA19030.hp1
 intron_variant MODIFIER c.718-2167T>C
c.718-2167T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84542035
chr1:84542056 A
A
 G
G
 29 a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
others(26): Show 
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0012g0082
a0005c0009t0012g0083
 31 HG00280.hp1
HG00609.hp1
HG00621.hp2
others(28): Show 
HG00280.hp1
HG00609.hp1
HG00621.hp2
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01168.hp1
HG01993.hp1
HG02300.hp1
HG02451.hp1
HG02630.hp1
HG02735.hp2
HG02738.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03471.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG04115.hp2
HG04228.hp1
NA18980.hp1
NA18994.hp1
NA19077.hp1
NA19090.hp1
NA21309.hp2
 intron_variant MODIFIER c.718-2146A>G
c.718-2146A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84542056
chr1:84542126 A
A
 G
G
 149 a0001c0003t0001g0075
a0001c0003t0001g0088
a0001c0003t0001g0089
others(146): Show 
a0001c0003t0001g0075
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 175 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(172): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01192.hp2
HG01261.hp1
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01515.hp2
HG01517.hp1
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG01993.hp1
HG02015.hp1
HG02040.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp2
HG02155.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp2
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04184.hp1
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18944.hp1
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18968.hp1
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18988.hp2
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19004.hp2
NA19012.hp1
NA19030.hp1
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19056.hp2
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19090.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
NA20805.hp1
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.718-2076A>G
c.718-2076A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84542126
chr1:84542501 T
T
 C
C
 1 a0001c0003t0003g0102
a0001c0003t0003g0102
 1 HG03195.hp2
HG03195.hp2
 intron_variant MODIFIER c.718-1701T>C
c.718-1701T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84542501
chr1:84542517 T
T
 A
A
 4 a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
others(1): Show 
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
 5 HG02723.hp2
HG02809.hp2
HG03130.hp1
others(2): Show 
HG02723.hp2
HG02809.hp2
HG03130.hp1
NA19043.hp1
NA19240.hp2
 intron_variant MODIFIER c.718-1685T>A
c.718-1685T>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84542517
chr1:84542726 G
G
 A
A
 1 a0001c0003t0004g0043
a0001c0003t0004g0043
 1 HG02293.hp2
HG02293.hp2
 intron_variant MODIFIER c.718-1476G>A
c.718-1476G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84542726
chr1:84542736 T
T
 C
C
 1 a0002c0002t0002g0094
a0002c0002t0002g0094
 1 NA19075.hp1
NA19075.hp1
 intron_variant MODIFIER c.718-1466T>C
c.718-1466T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84542736
chr1:84542798 T
T
 C
C
 1 a0001c0003t0006g0027
a0001c0003t0006g0027
 1 HG02630.hp2
HG02630.hp2
 intron_variant MODIFIER c.718-1404T>C
c.718-1404T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84542798
chr1:84542879 C
C
 T
T
 35 a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
others(32): Show 
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0128
a0002c0002t0007g0100
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 41 HG00408.hp1
HG00438.hp1
HG00544.hp1
others(38): Show 
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00673.hp1
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02132.hp2
HG02155.hp1
HG04199.hp2
HG04204.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA19012.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19091.hp1
 intron_variant MODIFIER c.718-1323C>T
c.718-1323C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84542879
chr1:84542942 T
T
 C
C
 1 a0001c0001t0001g0188
a0001c0001t0001g0188
 1 HG03453.hp2
HG03453.hp2
 intron_variant MODIFIER c.718-1260T>C
c.718-1260T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84542942
chr1:84542955 T
T
 C
C
 1 a0002c0002t0002g0134
a0002c0002t0002g0134
 1 NA18951.hp2
NA18951.hp2
 intron_variant MODIFIER c.718-1247T>C
c.718-1247T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84542955
chr1:84542971 C
C
 T
T
 1 a0001c0003t0001g0075
a0001c0003t0001g0075
 1 HG02922.hp2
HG02922.hp2
 intron_variant MODIFIER c.718-1231C>T
c.718-1231C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84542971
chr1:84543552 C
C
 A
A
 7 a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0055
others(4): Show 
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
 7 HG02145.hp1
HG02572.hp2
HG02622.hp1
others(4): Show 
HG02145.hp1
HG02572.hp2
HG02622.hp1
HG02717.hp2
HG02809.hp1
NA19043.hp2
NA20300.hp2
 intron_variant MODIFIER c.718-650C>A
c.718-650C>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84543552
chr1:84543774 T
T
 C
C
 3 a0001c0001t0001g0187
a0001c0001t0001g0188
a0001c0001t0001g0189
a0001c0001t0001g0187
a0001c0001t0001g0188
a0001c0001t0001g0189
 3 HG02486.hp2
HG03453.hp2
HG03579.hp1
HG02486.hp2
HG03453.hp2
HG03579.hp1
 intron_variant MODIFIER c.718-428T>C
c.718-428T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84543774
chr1:84543952 T
T
 C
C
 23 a0001c0003t0001g0075
a0001c0003t0006g0004
a0001c0003t0006g0027
others(20): Show 
a0001c0003t0001g0075
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
 27 HG00741.hp2
HG01168.hp2
HG01169.hp2
others(24): Show 
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02258.hp1
HG02630.hp2
HG02698.hp1
HG02818.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG03209.hp1
HG03225.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.718-250T>C
c.718-250T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84543952
chr1:84543982 T
T
 A
A
 44 a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
others(41): Show 
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0128
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0007g0100
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 53 HG00408.hp1
HG00438.hp1
HG00544.hp1
others(50): Show 
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00673.hp1
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01167.hp1
HG01169.hp1
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02132.hp2
HG02145.hp2
HG02155.hp1
HG02258.hp2
HG02280.hp1
HG02572.hp1
HG03041.hp1
HG04199.hp2
HG04204.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA19012.hp1
NA19030.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19091.hp1
 intron_variant MODIFIER c.718-220T>A
c.718-220T>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84543982
chr1:84544154 G
G
 T
T
 29 a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
others(26): Show 
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0126
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0128
a0002c0002t0007g0100
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 35 HG00408.hp1
HG00544.hp1
HG00673.hp1
others(32): Show 
HG00408.hp1
HG00544.hp1
HG00673.hp1
HG02015.hp1
HG02080.hp1
HG02132.hp2
HG02155.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA19012.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19075.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19091.hp1
 intron_variant MODIFIER c.718-48G>T
c.718-48G>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84544154
chr1:84544181 C
C
 T
T
 4 a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
others(1): Show 
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
 5 HG02723.hp2
HG02809.hp2
HG03130.hp1
others(2): Show 
HG02723.hp2
HG02809.hp2
HG03130.hp1
NA19043.hp1
NA19240.hp2
 intron_variant MODIFIER c.718-21C>T
c.718-21C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 8/13 chr1 84544181
chr1:84544379 T
T
 A
A
 2 a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0003t0011g0260
a0001c0003t0011g0261
 2 NA18988.hp2
NA19063.hp1
NA18988.hp2
NA19063.hp1
 intron_variant MODIFIER c.820+75T>A
c.820+75T>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 9/13 chr1 84544379
chr1:84544476 G
G
 C
C
 2 a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0003t0011g0260
a0001c0003t0011g0261
 2 NA18988.hp2
NA19063.hp1
NA18988.hp2
NA19063.hp1
 intron_variant MODIFIER c.820+172G>C
c.820+172G>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 9/13 chr1 84544476
chr1:84544498 A
A
 G
G
 1 a0003c0004t0001g0080
a0003c0004t0001g0080
 1 HG02965.hp1
HG02965.hp1
 intron_variant MODIFIER c.820+194A>G
c.820+194A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 9/13 chr1 84544498
chr1:84544570 TA
TA
 T
T
 15 a0001c0003t0004g0054
a0004c0005t0001g0005
a0004c0005t0001g0010
others(12): Show 
a0001c0003t0004g0054
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 20 HG01891.hp2
HG02055.hp1
HG02148.hp2
others(17): Show 
HG01891.hp2
HG02055.hp1
HG02148.hp2
HG02257.hp2
HG02451.hp2
HG02486.hp1
HG02622.hp2
HG02647.hp1
HG02723.hp1
HG02818.hp1
HG02922.hp1
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp2
HG03225.hp2
HG03486.hp1
HG06807.hp2
NA18522.hp2
NA19240.hp1
 intron_variant MODIFIER c.820+267delA
c.820+267delA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 9/13 chr1 84544570
chr1:84544622 G
G
 A
A
 3 a0001c0001t0001g0008
a0001c0001t0001g0214
a0001c0001t0001g0247
a0001c0001t0001g0008
a0001c0001t0001g0214
a0001c0001t0001g0247
 5 HG00597.hp1
NA19065.hp2
NA19066.hp1
others(2): Show 
HG00597.hp1
NA19065.hp2
NA19066.hp1
NA19068.hp1
NA19079.hp2
 intron_variant MODIFIER c.820+318G>A
c.820+318G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 9/13 chr1 84544622
chr1:84544664 G
G
 T
T
 1 a0001c0003t0003g0102
a0001c0003t0003g0102
 1 HG03195.hp2
HG03195.hp2
 intron_variant MODIFIER c.820+360G>T
c.820+360G>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 9/13 chr1 84544664
chr1:84544706 G
G
 A
A
 1 a0003c0004t0001g0015
a0003c0004t0001g0015
 2 HG02895.hp2
HG02897.hp2
HG02895.hp2
HG02897.hp2
 intron_variant MODIFIER c.820+402G>A
c.820+402G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 9/13 chr1 84544706
chr1:84545019 G
G
 A
A
 1 a0001c0003t0004g0040
a0001c0003t0004g0040
 1 HG02055.hp2
HG02055.hp2
 intron_variant MODIFIER c.821-615G>A
c.821-615G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 9/13 chr1 84545019
chr1:84545034 C
C
 A
A
 4 a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
others(1): Show 
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0003c0004t0006g0068
 6 HG02258.hp1
HG02630.hp2
HG02818.hp2
others(3): Show 
HG02258.hp1
HG02630.hp2
HG02818.hp2
HG02895.hp1
HG02965.hp2
HG03225.hp1
 intron_variant MODIFIER c.821-600C>A
c.821-600C>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 9/13 chr1 84545034
chr1:84545052 T
T
 C
C
 35 a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
others(32): Show 
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0128
a0002c0002t0007g0100
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 41 HG00408.hp1
HG00438.hp1
HG00544.hp1
others(38): Show 
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00673.hp1
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02132.hp2
HG02155.hp1
HG04199.hp2
HG04204.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA19012.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19091.hp1
 intron_variant MODIFIER c.821-582T>C
c.821-582T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 9/13 chr1 84545052
chr1:84545109 T
T
 C
C
 6 a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
others(3): Show 
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
 6 HG01109.hp1
HG01261.hp1
HG01515.hp2
others(3): Show 
HG01109.hp1
HG01261.hp1
HG01515.hp2
HG01517.hp1
HG02040.hp2
HG03017.hp2
 intron_variant MODIFIER c.821-525T>C
c.821-525T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 9/13 chr1 84545109
chr1:84545131 C
C
 T
T
 4 a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
others(1): Show 
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
 5 HG02723.hp2
HG02809.hp2
HG03130.hp1
others(2): Show 
HG02723.hp2
HG02809.hp2
HG03130.hp1
NA19043.hp1
NA19240.hp2
 intron_variant MODIFIER c.821-503C>T
c.821-503C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 9/13 chr1 84545131
chr1:84545222 A
A
 T
T
 4 a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
others(1): Show 
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
 5 HG02723.hp2
HG02809.hp2
HG03130.hp1
others(2): Show 
HG02723.hp2
HG02809.hp2
HG03130.hp1
NA19043.hp1
NA19240.hp2
 intron_variant MODIFIER c.821-412A>T
c.821-412A>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 9/13 chr1 84545222
chr1:84545223 AT
AT
 A
A
 4 a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
others(1): Show 
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0003c0004t0006g0068
 6 HG02258.hp1
HG02630.hp2
HG02818.hp2
others(3): Show 
HG02258.hp1
HG02630.hp2
HG02818.hp2
HG02895.hp1
HG02965.hp2
HG03225.hp1
 intron_variant MODIFIER c.821-410delT
c.821-410delT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 9/13 chr1 84545223
chr1:84545224 T
T
 A
A
 6 a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
others(3): Show 
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
 9 HG01070.hp1
HG01071.hp1
HG01081.hp1
others(6): Show 
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01167.hp1
HG01169.hp1
HG02280.hp1
HG02572.hp1
HG03041.hp1
NA19030.hp1
 intron_variant MODIFIER c.821-410T>A
c.821-410T>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 9/13 chr1 84545224
chr1:84545382 G
G
 C
C
 9 a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
others(6): Show 
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
 12 HG01070.hp1
HG01071.hp1
HG01081.hp1
others(9): Show 
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01167.hp1
HG01169.hp1
HG02145.hp2
HG02258.hp2
HG02280.hp1
HG02572.hp1
HG03041.hp1
NA19030.hp1
 intron_variant MODIFIER c.821-252G>C
c.821-252G>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 9/13 chr1 84545382
chr1:84545471 C
C
 T
T
 19 a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
others(16): Show 
a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
 21 HG00741.hp2
HG01168.hp2
HG01169.hp2
others(18): Show 
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02698.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.821-163C>T
c.821-163C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 9/13 chr1 84545471
chr1:84545801 T
T
 G
G
 3 a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0076
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0076
 3 HG01361.hp2
HG01496.hp2
HG01975.hp1
HG01361.hp2
HG01496.hp2
HG01975.hp1
 intron_variant MODIFIER c.946+42T>G
c.946+42T>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 chr1 84545801
chr1:84545901 T
T
 C
C
 6 a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
others(3): Show 
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
 6 HG01109.hp1
HG01261.hp1
HG01515.hp2
others(3): Show 
HG01109.hp1
HG01261.hp1
HG01515.hp2
HG01517.hp1
HG02040.hp2
HG03017.hp2
 intron_variant MODIFIER c.946+142T>C
c.946+142T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 chr1 84545901
chr1:84545940 G
G
 A
A
 1 a0001c0001t0001g0193
a0001c0001t0001g0193
 1 HG04204.hp2
HG04204.hp2
 intron_variant MODIFIER c.946+181G>A
c.946+181G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 chr1 84545940
chr1:84545960 G
G
 T
T
 14 a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
others(11): Show 
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 19 HG01891.hp2
HG02055.hp1
HG02257.hp2
others(16): Show 
HG01891.hp2
HG02055.hp1
HG02257.hp2
HG02451.hp2
HG02486.hp1
HG02622.hp2
HG02647.hp1
HG02723.hp1
HG02818.hp1
HG02922.hp1
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp2
HG03225.hp2
HG03486.hp1
HG06807.hp2
NA18522.hp2
NA19240.hp1
 intron_variant MODIFIER c.946+201G>T
c.946+201G>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 chr1 84545960
chr1:84546044 T
T
 C
C
 2 a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0003t0011g0260
a0001c0003t0011g0261
 2 NA18988.hp2
NA19063.hp1
NA18988.hp2
NA19063.hp1
 intron_variant MODIFIER c.946+285T>C
c.946+285T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 chr1 84546044
chr1:84546179 C
C
 T
T
 31 a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
others(28): Show 
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0106
a0002c0002t0012g0082
a0005c0009t0012g0083
a0006c0007t0001g0035
 33 HG00280.hp1
HG00609.hp1
HG00621.hp2
others(30): Show 
HG00280.hp1
HG00609.hp1
HG00621.hp2
HG00639.hp2
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01168.hp1
HG01993.hp1
HG02109.hp1
HG02300.hp1
HG02451.hp1
HG02630.hp1
HG02735.hp2
HG02738.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03471.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG04115.hp2
HG04228.hp1
NA18980.hp1
NA18994.hp1
NA19077.hp1
NA19090.hp1
NA21309.hp2
 intron_variant MODIFIER c.946+420C>T
c.946+420C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 chr1 84546179
chr1:84546251 C
C
 T
T
 1 a0001c0006t0014g0061
a0001c0006t0014g0061
 1 HG02723.hp2
HG02723.hp2
 intron_variant MODIFIER c.946+492C>T
c.946+492C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 chr1 84546251
chr1:84546457 C
C
 CA
CA
 19 a0001c0001t0001g0157
a0001c0001t0001g0160
a0001c0001t0001g0161
others(16): Show 
a0001c0001t0001g0157
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0168
a0001c0001t0001g0172
a0001c0001t0001g0173
a0001c0001t0001g0194
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0215
a0001c0001t0001g0219
a0001c0001t0001g0233
a0001c0001t0001g0243
a0001c0001t0001g0244
a0001c0001t0001g0256
a0001c0001t0001g0257
a0001c0001t0001g0267
a0001c0001t0009g0229
a0007c0008t0001g0242
 19 HG00609.hp2
HG00735.hp2
HG01099.hp2
others(16): Show 
HG00609.hp2
HG00735.hp2
HG01099.hp2
HG01175.hp1
HG02080.hp2
HG02148.hp1
HG02257.hp1
HG02280.hp2
HG02647.hp2
HG02738.hp2
HG04115.hp1
HG04184.hp2
NA18940.hp1
NA18967.hp1
NA18980.hp2
NA18994.hp2
NA19012.hp2
NA19030.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.946+721dupA
c.946+721dupA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 INFO_REALIGN_3_PRIME chr1 84546457
chr1:84546457 CA
CA
 C
C
 11 a0001c0001t0001g0252
a0001c0003t0004g0040
a0001c0003t0004g0054
others(8): Show 
a0001c0001t0001g0252
a0001c0003t0004g0040
a0001c0003t0004g0054
a0001c0006t0008g0086
a0001c0006t0014g0061
a0002c0002t0002g0019
a0002c0002t0002g0116
a0002c0002t0002g0117
a0003c0004t0001g0070
a0003c0004t0001g0078
a0004c0005t0001g0031
 12 HG02055.hp2
HG02148.hp2
HG02257.hp2
others(9): Show 
HG02055.hp2
HG02148.hp2
HG02257.hp2
HG02723.hp2
HG03516.hp2
NA18944.hp1
NA18948.hp1
NA18967.hp2
NA18992.hp2
NA19043.hp1
NA19074.hp1
NA21309.hp1
 intron_variant MODIFIER c.946+721delA
c.946+721delA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 INFO_REALIGN_3_PRIME chr1 84546457
chr1:84546457 CAA
CAA
 C
C
 129 a0001c0003t0001g0075
a0001c0003t0001g0088
a0001c0003t0001g0089
others(126): Show 
a0001c0003t0001g0075
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
a0001c0003t0003g0102
a0001c0003t0004g0002
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0057
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0087
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 152 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(149): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01192.hp2
HG01261.hp1
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01515.hp2
HG01517.hp1
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG01993.hp1
HG02015.hp1
HG02040.hp2
HG02055.hp1
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02145.hp2
HG02155.hp1
HG02258.hp2
HG02280.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp1
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02647.hp1
HG02698.hp1
HG02723.hp1
HG02735.hp2
HG02738.hp1
HG02809.hp2
HG02818.hp1
HG02886.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp2
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03540.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04184.hp1
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18946.hp2
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18968.hp1
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18988.hp2
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19004.hp2
NA19012.hp1
NA19030.hp1
NA19054.hp1
NA19056.hp2
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19072.hp2
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19090.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20805.hp1
NA21309.hp2
 intron_variant MODIFIER c.946+720_946+721del
others(2): Show 
c.946+720_946+721delAA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 INFO_REALIGN_3_PRIME chr1 84546457
chr1:84546457 CAAA
CAAA
 C
C
 10 a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0055
others(7): Show 
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0003c0004t0006g0068
 12 HG02145.hp1
HG02258.hp1
HG02572.hp2
others(9): Show 
HG02145.hp1
HG02258.hp1
HG02572.hp2
HG02630.hp2
HG02717.hp2
HG02809.hp1
HG02818.hp2
HG02895.hp1
HG02965.hp2
HG03225.hp1
NA19043.hp2
NA20300.hp2
 intron_variant MODIFIER c.946+719_946+721del
others(3): Show 
c.946+719_946+721delAAA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 INFO_REALIGN_3_PRIME chr1 84546457
chr1:84546633 C
C
 T
T
 3 a0003c0004t0001g0070
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0070
a0003c0004t0001g0072
a0003c0004t0001g0073
 3 HG00741.hp2
HG03209.hp1
NA21309.hp1
HG00741.hp2
HG03209.hp1
NA21309.hp1
 intron_variant MODIFIER c.946+874C>T
c.946+874C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 chr1 84546633
chr1:84546981 G
G
 GT
GT
 143 a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
others(140): Show 
a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 169 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(166): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG01993.hp1
HG02015.hp1
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp2
HG02155.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04184.hp1
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18944.hp1
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18968.hp1
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18988.hp2
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19004.hp2
NA19012.hp1
NA19030.hp1
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19056.hp2
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19090.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
NA20805.hp1
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.946+1224dupT
c.946+1224dupT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 INFO_REALIGN_3_PRIME chr1 84546981
chr1:84547012 G
G
 A
A
 16 a0001c0003t0004g0002
a0001c0003t0004g0041
a0001c0003t0004g0042
others(13): Show 
a0001c0003t0004g0002
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0009g0013
 21 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(18): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG01192.hp2
HG01346.hp1
HG01943.hp1
HG02148.hp2
HG02293.hp2
HG03834.hp1
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18989.hp2
NA19004.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19089.hp2
 intron_variant MODIFIER c.946+1253G>A
c.946+1253G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 chr1 84547012
chr1:84547230 T
T
 C
C
 1 a0001c0003t0003g0110
a0001c0003t0003g0110
 1 NA20300.hp2
NA20300.hp2
 intron_variant MODIFIER c.946+1471T>C
c.946+1471T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 chr1 84547230
chr1:84547296 T
T
 C
C
 114 a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
others(111): Show 
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0009g0013
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 135 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(132): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00673.hp1
HG00735.hp1
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01169.hp1
HG01192.hp2
HG01346.hp1
HG01891.hp2
HG01943.hp1
HG01993.hp1
HG02015.hp1
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp2
HG02155.hp1
HG02257.hp2
HG02258.hp2
HG02280.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02647.hp1
HG02717.hp2
HG02723.hp1
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02818.hp1
HG02886.hp2
HG02922.hp1
HG02976.hp1
HG02976.hp2
HG03041.hp1
HG03041.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp2
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04199.hp2
HG04204.hp1
HG04228.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18944.hp1
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18968.hp1
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19004.hp2
NA19012.hp1
NA19030.hp1
NA19043.hp2
NA19054.hp1
NA19056.hp2
NA19057.hp2
NA19058.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19090.hp1
NA19091.hp1
NA19240.hp1
NA20300.hp2
NA21309.hp2
 intron_variant MODIFIER c.947-1490T>C
c.947-1490T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 chr1 84547296
chr1:84547314 T
T
 G
G
 1 a0001c0001t0001g0186
a0001c0001t0001g0186
 1 HG02717.hp1
HG02717.hp1
 intron_variant MODIFIER c.947-1472T>G
c.947-1472T>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 chr1 84547314
chr1:84547497 A
A
 G
G
 14 a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
others(11): Show 
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 19 HG01891.hp2
HG02055.hp1
HG02257.hp2
others(16): Show 
HG01891.hp2
HG02055.hp1
HG02257.hp2
HG02451.hp2
HG02486.hp1
HG02622.hp2
HG02647.hp1
HG02723.hp1
HG02818.hp1
HG02922.hp1
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp2
HG03225.hp2
HG03486.hp1
HG06807.hp2
NA18522.hp2
NA19240.hp1
 intron_variant MODIFIER c.947-1289A>G
c.947-1289A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 chr1 84547497
chr1:84547718 C
C
 T
T
 104 a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
others(101): Show 
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0006g0068
a0005c0009t0012g0083
a0006c0007t0001g0035
 122 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(119): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00673.hp1
HG00735.hp1
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01169.hp1
HG01192.hp2
HG01346.hp1
HG01943.hp1
HG01993.hp1
HG02015.hp1
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp2
HG02155.hp1
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02630.hp1
HG02630.hp2
HG02717.hp2
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02965.hp2
HG02976.hp2
HG03041.hp1
HG03139.hp1
HG03195.hp2
HG03225.hp1
HG03471.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04199.hp2
HG04204.hp1
HG04228.hp1
NA18612.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18944.hp1
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18968.hp1
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19004.hp2
NA19012.hp1
NA19030.hp1
NA19043.hp2
NA19054.hp1
NA19056.hp2
NA19057.hp2
NA19058.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19090.hp1
NA19091.hp1
NA20300.hp2
NA21309.hp2
 intron_variant MODIFIER c.947-1068C>T
c.947-1068C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 chr1 84547718
chr1:84547719 G
G
 A
A
 2 a0001c0001t0001g0264
a0001c0001t0001g0265
a0001c0001t0001g0264
a0001c0001t0001g0265
 2 HG00438.hp2
NA18952.hp2
HG00438.hp2
NA18952.hp2
 intron_variant MODIFIER c.947-1067G>A
c.947-1067G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 chr1 84547719
chr1:84548065 C
C
 T
T
 21 a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
others(18): Show 
a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
 23 HG00741.hp2
HG01168.hp2
HG01169.hp2
others(20): Show 
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02698.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18988.hp2
NA19063.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.947-721C>T
c.947-721C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 chr1 84548065
chr1:84548078 T
T
 C
C
 1 a0001c0001t0001g0237
a0001c0001t0001g0237
 1 HG03669.hp2
HG03669.hp2
 intron_variant MODIFIER c.947-708T>C
c.947-708T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 chr1 84548078
chr1:84548434 TTA
TTA
 T
T
 34 a0001c0001t0001g0009
a0001c0001t0001g0235
a0001c0001t0001g0244
others(31): Show 
a0001c0001t0001g0009
a0001c0001t0001g0235
a0001c0001t0001g0244
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0106
a0002c0002t0012g0082
a0005c0009t0012g0083
a0006c0007t0001g0035
 38 HG00280.hp1
HG00609.hp1
HG00621.hp2
others(35): Show 
HG00280.hp1
HG00609.hp1
HG00621.hp2
HG00639.hp2
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01168.hp1
HG01192.hp1
HG01975.hp2
HG01993.hp1
HG02109.hp1
HG02300.hp1
HG02451.hp1
HG02630.hp1
HG02735.hp2
HG02738.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03471.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp1
HG03710.hp2
HG04115.hp2
HG04184.hp2
HG04228.hp1
NA18980.hp1
NA18994.hp1
NA19077.hp1
NA19090.hp1
NA20805.hp2
NA21309.hp2
 intron_variant MODIFIER c.947-346_947-345del
others(2): Show 
c.947-346_947-345delAT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 INFO_REALIGN_3_PRIME chr1 84548434
chr1:84548606 A
A
 C
C
 19 a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
others(16): Show 
a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
 21 HG00741.hp2
HG01168.hp2
HG01169.hp2
others(18): Show 
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02698.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.947-180A>C
c.947-180A>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 chr1 84548606
chr1:84548647 G
G
 A
A
 25 a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
others(22): Show 
a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
 28 HG00741.hp2
HG01168.hp2
HG01169.hp2
others(25): Show 
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02698.hp1
HG02723.hp2
HG02809.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03130.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18988.hp2
NA19043.hp1
NA19063.hp1
NA19240.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.947-139G>A
c.947-139G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 chr1 84548647
chr1:84548750 C
C
 CT
CT
 22 a0001c0003t0003g0102
a0001c0003t0003g0105
a0002c0002t0002g0018
others(19): Show 
a0001c0003t0003g0102
a0001c0003t0003g0105
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 24 HG00438.hp1
HG00544.hp1
HG00673.hp1
others(21): Show 
HG00438.hp1
HG00544.hp1
HG00673.hp1
HG02083.hp1
HG02809.hp1
HG03195.hp2
HG04199.hp2
HG04204.hp1
NA18946.hp2
NA18948.hp1
NA18952.hp1
NA18955.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18986.hp2
NA18992.hp1
NA19012.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19083.hp2
NA19091.hp1
 splice_region_variant&intron_variant LOW c.947-5dupT
c.947-5dupT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 INFO_REALIGN_3_PRIME chr1 84548750
chr1:84548750 C
C
 CTT
CTT
 8 a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0114
others(5): Show 
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0126
a0002c0002t0003g0128
 12 HG00408.hp1
HG02015.hp1
HG02080.hp1
others(9): Show 
HG00408.hp1
HG02015.hp1
HG02080.hp1
HG02155.hp1
NA18950.hp1
NA18957.hp1
NA18979.hp2
NA18983.hp1
NA18987.hp1
NA18990.hp1
NA19079.hp1
NA19084.hp1
 splice_region_variant&intron_variant LOW c.947-6_947-5dupTT
c.947-6_947-5dupTT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 INFO_REALIGN_3_PRIME chr1 84548750
chr1:84548750 CT
CT
 C
C
 41 a0001c0001t0001g0003
a0001c0001t0001g0166
a0001c0001t0001g0167
others(38): Show 
a0001c0001t0001g0003
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0210
a0001c0001t0001g0217
a0001c0001t0001g0220
a0001c0001t0001g0224
a0001c0001t0001g0233
a0001c0001t0001g0238
a0001c0001t0001g0243
a0001c0001t0001g0245
a0001c0001t0001g0253
a0001c0001t0001g0257
a0001c0001t0001g0264
a0001c0001t0001g0269
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0057
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0003c0004t0006g0068
a0004c0005t0001g0030
a0004c0005t0001g0037
 51 HG00140.hp1
HG00438.hp2
HG00597.hp2
others(48): Show 
HG00140.hp1
HG00438.hp2
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG00735.hp2
HG01167.hp2
HG01192.hp2
HG01346.hp1
HG01943.hp1
HG02015.hp2
HG02040.hp1
HG02055.hp1
HG02055.hp2
HG02109.hp2
HG02258.hp1
HG02293.hp2
HG02486.hp1
HG02622.hp1
HG02630.hp2
HG02738.hp2
HG02818.hp2
HG02895.hp1
HG02965.hp2
HG03225.hp1
HG03834.hp1
HG03834.hp2
HG04115.hp1
NA18522.hp1
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18945.hp2
NA18950.hp2
NA18954.hp1
NA18968.hp1
NA18968.hp2
NA18975.hp1
NA18986.hp1
NA18987.hp2
NA18989.hp2
NA19004.hp2
NA19007.hp1
NA19007.hp2
NA19030.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19089.hp2
NA20300.hp2
 splice_region_variant&intron_variant LOW c.947-5delT
c.947-5delT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 INFO_REALIGN_3_PRIME chr1 84548750
chr1:84548750 CTT
CTT
 C
C
 103 a0001c0001t0001g0001
a0001c0001t0001g0008
a0001c0001t0001g0009
others(100): Show 
a0001c0001t0001g0001
a0001c0001t0001g0008
a0001c0001t0001g0009
a0001c0001t0001g0025
a0001c0001t0001g0026
a0001c0001t0001g0060
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0163
a0001c0001t0001g0164
a0001c0001t0001g0171
a0001c0001t0001g0172
a0001c0001t0001g0173
a0001c0001t0001g0174
a0001c0001t0001g0175
a0001c0001t0001g0176
a0001c0001t0001g0177
a0001c0001t0001g0179
a0001c0001t0001g0180
a0001c0001t0001g0181
a0001c0001t0001g0182
a0001c0001t0001g0184
a0001c0001t0001g0185
a0001c0001t0001g0186
a0001c0001t0001g0187
a0001c0001t0001g0188
a0001c0001t0001g0189
a0001c0001t0001g0190
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0204
a0001c0001t0001g0205
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0214
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0219
a0001c0001t0001g0222
a0001c0001t0001g0225
a0001c0001t0001g0226
a0001c0001t0001g0227
a0001c0001t0001g0228
a0001c0001t0001g0230
a0001c0001t0001g0232
a0001c0001t0001g0234
a0001c0001t0001g0235
a0001c0001t0001g0236
a0001c0001t0001g0237
a0001c0001t0001g0239
a0001c0001t0001g0241
a0001c0001t0001g0244
a0001c0001t0001g0247
a0001c0001t0001g0248
a0001c0001t0001g0249
a0001c0001t0001g0251
a0001c0001t0001g0252
a0001c0001t0001g0256
a0001c0001t0001g0258
a0001c0001t0001g0259
a0001c0001t0001g0265
a0001c0001t0001g0266
a0001c0001t0001g0267
a0001c0001t0001g0268
a0001c0001t0007g0017
a0001c0001t0007g0127
a0001c0001t0009g0229
a0001c0001t0013g0165
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
a0001c0003t0004g0055
a0003c0004t0001g0078
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0029
a0004c0005t0001g0031
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0038
a0007c0008t0001g0242
 121 HG00140.hp2
HG00280.hp2
HG00408.hp2
others(118): Show 
HG00140.hp2
HG00280.hp2
HG00408.hp2
HG00597.hp1
HG00609.hp2
HG00642.hp1
HG00642.hp2
HG00673.hp2
HG00738.hp1
HG00738.hp2
HG00741.hp1
HG01070.hp2
HG01071.hp2
HG01081.hp2
HG01099.hp2
HG01106.hp2
HG01109.hp1
HG01175.hp1
HG01175.hp2
HG01192.hp1
HG01255.hp1
HG01255.hp2
HG01261.hp1
HG01261.hp2
HG01346.hp2
HG01361.hp1
HG01496.hp1
HG01515.hp1
HG01515.hp2
HG01517.hp1
HG01891.hp2
HG01943.hp2
HG01975.hp2
HG02040.hp2
HG02080.hp2
HG02083.hp2
HG02132.hp1
HG02148.hp1
HG02155.hp2
HG02257.hp1
HG02257.hp2
HG02280.hp2
HG02293.hp1
HG02300.hp2
HG02451.hp2
HG02486.hp2
HG02647.hp2
HG02717.hp1
HG02723.hp1
HG02735.hp1
HG02818.hp1
HG02886.hp1
HG02922.hp1
HG02970.hp2
HG02976.hp1
HG03017.hp1
HG03017.hp2
HG03130.hp2
HG03195.hp1
HG03209.hp2
HG03453.hp1
HG03453.hp2
HG03486.hp1
HG03492.hp2
HG03516.hp2
HG03540.hp2
HG03579.hp1
HG03669.hp2
HG03710.hp1
HG04184.hp2
HG04204.hp2
HG04228.hp2
HG06807.hp2
NA18522.hp2
NA18612.hp1
NA18747.hp1
NA18940.hp1
NA18942.hp2
NA18944.hp2
NA18946.hp1
NA18948.hp2
NA18951.hp1
NA18952.hp2
NA18955.hp2
NA18957.hp2
NA18961.hp2
NA18965.hp2
NA18967.hp1
NA18969.hp1
NA18969.hp2
NA18971.hp1
NA18975.hp2
NA18979.hp1
NA18980.hp2
NA18983.hp2
NA18990.hp2
NA18992.hp2
NA18994.hp2
NA19004.hp1
NA19012.hp2
NA19043.hp2
NA19054.hp2
NA19056.hp1
NA19057.hp1
NA19058.hp1
NA19063.hp2
NA19065.hp1
NA19065.hp2
NA19066.hp1
NA19066.hp2
NA19068.hp1
NA19068.hp2
NA19077.hp2
NA19079.hp2
NA19084.hp2
NA19089.hp1
NA19090.hp2
NA19091.hp2
NA20300.hp1
NA20805.hp2
homoSapiens_chm13v2.hp1
 splice_region_variant&intron_variant LOW c.947-6_947-5delTT
c.947-6_947-5delTT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 INFO_REALIGN_3_PRIME chr1 84548750
chr1:84548750 CTTT
CTTT
 C
C
 20 a0001c0001t0001g0170
a0001c0001t0001g0178
a0001c0001t0001g0195
others(17): Show 
a0001c0001t0001g0170
a0001c0001t0001g0178
a0001c0001t0001g0195
a0001c0001t0001g0201
a0001c0001t0001g0213
a0001c0001t0001g0218
a0001c0001t0001g0221
a0001c0001t0001g0223
a0001c0001t0001g0231
a0001c0001t0001g0246
a0001c0006t0014g0061
a0003c0004t0001g0064
a0003c0004t0001g0070
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0079
a0003c0004t0001g0080
a0004c0005t0001g0012
a0004c0005t0001g0033
a0004c0005t0001g0039
 21 HG01517.hp2
HG01891.hp1
HG01975.hp1
others(18): Show 
HG01517.hp2
HG01891.hp1
HG01975.hp1
HG01993.hp2
HG02647.hp1
HG02698.hp2
HG02723.hp2
HG02897.hp1
HG02965.hp1
HG03041.hp2
HG03225.hp2
HG03491.hp2
HG03540.hp1
HG04199.hp1
NA18962.hp2
NA18989.hp1
NA19072.hp1
NA19075.hp2
NA19083.hp1
NA19240.hp1
NA21309.hp1
 splice_region_variant&intron_variant LOW c.947-7_947-5delTTT
c.947-7_947-5delTTT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 INFO_REALIGN_3_PRIME chr1 84548750
chr1:84548750 CTTTT
CTTTT
 C
C
 21 a0001c0003t0001g0075
a0002c0002t0005g0023
a0002c0002t0005g0024
others(18): Show 
a0001c0003t0001g0075
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0081
a0004c0005t0001g0032
 25 HG00741.hp2
HG01071.hp1
HG01081.hp1
others(22): Show 
HG00741.hp2
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG02145.hp2
HG02258.hp2
HG02280.hp1
HG02572.hp1
HG02622.hp2
HG02698.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02970.hp1
HG03041.hp1
HG03209.hp1
HG04184.hp1
HG06807.hp1
NA19030.hp1
NA20805.hp1
 splice_region_variant&intron_variant LOW c.947-8_947-5delTTTT
c.947-8_947-5delTTTT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 INFO_REALIGN_3_PRIME chr1 84548750
chr1:84548750 CTTTTT
CTTTTT
 C
C
 4 a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
others(1): Show 
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0002c0002t0005g0022
 6 HG01070.hp1
HG01167.hp1
HG02809.hp2
others(3): Show 
HG01070.hp1
HG01167.hp1
HG02809.hp2
HG03130.hp1
NA19043.hp1
NA19240.hp2
 splice_region_variant&intron_variant LOW c.947-9_947-5delTTTT
others(1): Show 
c.947-9_947-5delTTTTT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 INFO_REALIGN_3_PRIME chr1 84548750
chr1:84548750 CTTTTTTT
others(8): Show 
CTTTTTTTTTTTTTTT
 C
C
 31 a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
others(28): Show 
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0106
a0002c0002t0012g0082
a0005c0009t0012g0083
a0006c0007t0001g0035
 33 HG00280.hp1
HG00609.hp1
HG00621.hp2
others(30): Show 
HG00280.hp1
HG00609.hp1
HG00621.hp2
HG00639.hp2
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01168.hp1
HG01993.hp1
HG02109.hp1
HG02300.hp1
HG02451.hp1
HG02630.hp1
HG02735.hp2
HG02738.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03471.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG04115.hp2
HG04228.hp1
NA18980.hp1
NA18994.hp1
NA19077.hp1
NA19090.hp1
NA21309.hp2
 splice_region_variant&intron_variant LOW c.947-19_947-5delTTT
others(12): Show 
c.947-19_947-5delTTTTTTTTTTTTTTT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 INFO_REALIGN_3_PRIME chr1 84548750
chr1:84548754 T
T
 C
C
 2 a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0199
a0001c0001t0001g0200
 2 HG00140.hp2
HG01255.hp2
HG00140.hp2
HG01255.hp2
 intron_variant MODIFIER c.947-32T>C
c.947-32T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 chr1 84548754
chr1:84548781 T
T
 A
A
 1 a0001c0001t0001g0172
a0001c0001t0001g0172
 1 HG01099.hp2
HG01099.hp2
 splice_region_variant&intron_variant LOW c.947-5T>A
c.947-5T>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 10/13 chr1 84548781
chr1:84548996 G
G
 A
A
 4 a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
others(1): Show 
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
 5 HG02723.hp2
HG02809.hp2
HG03130.hp1
others(2): Show 
HG02723.hp2
HG02809.hp2
HG03130.hp1
NA19043.hp1
NA19240.hp2
 intron_variant MODIFIER c.1125+32G>A
c.1125+32G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 11/13 chr1 84548996
chr1:84549162 G
G
 A
A
 3 a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
 5 HG02258.hp1
HG02630.hp2
HG02895.hp1
others(2): Show 
HG02258.hp1
HG02630.hp2
HG02895.hp1
HG02965.hp2
HG03225.hp1
 intron_variant MODIFIER c.1125+198G>A
c.1125+198G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 11/13 chr1 84549162
chr1:84549234 G
G
 C
C
 1 a0002c0002t0006g0063
a0002c0002t0006g0063
 1 HG03471.hp1
HG03471.hp1
 intron_variant MODIFIER c.1125+270G>C
c.1125+270G>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 11/13 chr1 84549234
chr1:84549306 A
A
 G
G
 19 a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
others(16): Show 
a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
 21 HG00741.hp2
HG01168.hp2
HG01169.hp2
others(18): Show 
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02698.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.1125+342A>G
c.1125+342A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 11/13 chr1 84549306
chr1:84549506 T
T
 C
C
 25 a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
others(22): Show 
a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
 28 HG00741.hp2
HG01168.hp2
HG01169.hp2
others(25): Show 
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02698.hp1
HG02723.hp2
HG02809.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03130.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18988.hp2
NA19043.hp1
NA19063.hp1
NA19240.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.1125+542T>C
c.1125+542T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 11/13 chr1 84549506
chr1:84549742 T
T
 A
A
 1 a0001c0003t0003g0102
a0001c0003t0003g0102
 1 HG03195.hp2
HG03195.hp2
 intron_variant MODIFIER c.1126-690T>A
c.1126-690T>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 11/13 chr1 84549742
chr1:84549767 G
G
 A
A
 4 a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
others(1): Show 
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0149
 4 HG03492.hp1
HG03710.hp2
HG04115.hp2
others(1): Show 
HG03492.hp1
HG03710.hp2
HG04115.hp2
HG04228.hp1
 intron_variant MODIFIER c.1126-665G>A
c.1126-665G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 11/13 chr1 84549767
chr1:84549872 C
C
 CT
CT
 141 a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
others(138): Show 
a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 167 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(164): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG01993.hp1
HG02015.hp1
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp2
HG02155.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04184.hp1
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18944.hp1
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18968.hp1
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19004.hp2
NA19012.hp1
NA19030.hp1
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19056.hp2
NA19057.hp2
NA19058.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19090.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
NA20805.hp1
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.1126-550dupT
c.1126-550dupT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 11/13 INFO_REALIGN_3_PRIME chr1 84549872
chr1:84550024 T
T
 C
C
 8 a0001c0003t0001g0075
a0003c0004t0001g0015
a0003c0004t0001g0064
others(5): Show 
a0001c0003t0001g0075
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
 9 HG01891.hp1
HG02895.hp2
HG02897.hp2
others(6): Show 
HG01891.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03516.hp2
HG03540.hp1
HG04199.hp1
 intron_variant MODIFIER c.1126-408T>C
c.1126-408T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 11/13 chr1 84550024
chr1:84550084 ATAT
ATAT
 A
A
 34 a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
others(31): Show 
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0128
a0002c0002t0007g0100
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 39 HG00408.hp1
HG00438.hp1
HG00544.hp1
others(36): Show 
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00673.hp1
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02132.hp2
HG02155.hp1
HG04199.hp2
HG04204.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA19012.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp2
NA19075.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19091.hp1
 intron_variant MODIFIER c.1126-342_1126-340d
others(5): Show 
c.1126-342_1126-340delTTA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 11/13 INFO_REALIGN_3_PRIME chr1 84550084
chr1:84550090 TTAAG
TTAAG
 T
T
 4 a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
others(1): Show 
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0003c0004t0006g0068
 6 HG02258.hp1
HG02630.hp2
HG02818.hp2
others(3): Show 
HG02258.hp1
HG02630.hp2
HG02818.hp2
HG02895.hp1
HG02965.hp2
HG03225.hp1
 intron_variant MODIFIER c.1126-339_1126-336d
others(6): Show 
c.1126-339_1126-336delAGTA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 11/13 INFO_REALIGN_3_PRIME chr1 84550090
chr1:84550117 T
T
 G
G
 25 a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
others(22): Show 
a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
 28 HG00741.hp2
HG01168.hp2
HG01169.hp2
others(25): Show 
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02698.hp1
HG02723.hp2
HG02809.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03130.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18988.hp2
NA19043.hp1
NA19063.hp1
NA19240.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.1126-315T>G
c.1126-315T>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 11/13 chr1 84550117
chr1:84550123 G
G
 A
A
 1 a0001c0001t0001g0186
a0001c0001t0001g0186
 1 HG02717.hp1
HG02717.hp1
 intron_variant MODIFIER c.1126-309G>A
c.1126-309G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 11/13 chr1 84550123
chr1:84550206 C
C
 T
T
 1 a0003c0004t0006g0068
a0003c0004t0006g0068
 1 HG02818.hp2
HG02818.hp2
 intron_variant MODIFIER c.1126-226C>T
c.1126-226C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 11/13 chr1 84550206
chr1:84550429 C
C
 T
T
 25 a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
others(22): Show 
a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
 28 HG00741.hp2
HG01168.hp2
HG01169.hp2
others(25): Show 
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02698.hp1
HG02723.hp2
HG02809.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03130.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18988.hp2
NA19043.hp1
NA19063.hp1
NA19240.hp2
NA20805.hp1
NA21309.hp1
 splice_region_variant&intron_variant LOW c.1126-3C>T
c.1126-3C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 11/13 chr1 84550429
chr1:84550720 A
A
 G
G
 149 a0001c0003t0001g0075
a0001c0003t0001g0088
a0001c0003t0001g0089
others(146): Show 
a0001c0003t0001g0075
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 175 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(172): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01192.hp2
HG01261.hp1
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01515.hp2
HG01517.hp1
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG01993.hp1
HG02015.hp1
HG02040.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp2
HG02155.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03017.hp2
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04184.hp1
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18944.hp1
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18968.hp1
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18988.hp2
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19004.hp2
NA19012.hp1
NA19030.hp1
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19056.hp2
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19090.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
NA20805.hp1
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.1224+190A>G
c.1224+190A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84550720
chr1:84550895 T
T
 C
C
 27 a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
others(24): Show 
a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0007g0106
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0006c0007t0001g0035
 30 HG00639.hp2
HG00741.hp2
HG01168.hp2
others(27): Show 
HG00639.hp2
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02109.hp1
HG02698.hp1
HG02723.hp2
HG02809.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03130.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18988.hp2
NA19043.hp1
NA19063.hp1
NA19240.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.1224+365T>C
c.1224+365T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84550895
chr1:84551080 A
A
 G
G
 3 a0001c0001t0001g0204
a0001c0001t0001g0207
a0001c0001t0001g0209
a0001c0001t0001g0204
a0001c0001t0001g0207
a0001c0001t0001g0209
 3 NA18942.hp2
NA18971.hp1
NA19004.hp1
NA18942.hp2
NA18971.hp1
NA19004.hp1
 intron_variant MODIFIER c.1224+550A>G
c.1224+550A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84551080
chr1:84551370 AAAAT
AAAAT
 A
A
 4 a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
others(1): Show 
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0003c0004t0006g0068
 6 HG02258.hp1
HG02630.hp2
HG02818.hp2
others(3): Show 
HG02258.hp1
HG02630.hp2
HG02818.hp2
HG02895.hp1
HG02965.hp2
HG03225.hp1
 intron_variant MODIFIER c.1224+848_1224+851d
others(6): Show 
c.1224+848_1224+851delTAAA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 INFO_REALIGN_3_PRIME chr1 84551370
chr1:84551427 T
T
 C
C
 1 a0004c0005t0001g0029
a0004c0005t0001g0029
 1 HG06807.hp2
HG06807.hp2
 intron_variant MODIFIER c.1224+897T>C
c.1224+897T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84551427
chr1:84551643 C
C
 T
T
 27 a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
others(24): Show 
a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0007g0106
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0006c0007t0001g0035
 30 HG00639.hp2
HG00741.hp2
HG01168.hp2
others(27): Show 
HG00639.hp2
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02109.hp1
HG02698.hp1
HG02723.hp2
HG02809.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03130.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18988.hp2
NA19043.hp1
NA19063.hp1
NA19240.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.1224+1113C>T
c.1224+1113C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84551643
chr1:84551724 A
A
 G
G
 1 a0001c0001t0001g0210
a0001c0001t0001g0210
 1 HG02109.hp2
HG02109.hp2
 intron_variant MODIFIER c.1224+1194A>G
c.1224+1194A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84551724
chr1:84551725 C
C
 A
A
 1 a0001c0001t0001g0210
a0001c0001t0001g0210
 1 HG02109.hp2
HG02109.hp2
 intron_variant MODIFIER c.1224+1195C>A
c.1224+1195C>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84551725
chr1:84551823 C
C
 T
T
 1 a0002c0002t0002g0120
a0002c0002t0002g0120
 1 NA19012.hp1
NA19012.hp1
 intron_variant MODIFIER c.1224+1293C>T
c.1224+1293C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84551823
chr1:84551918 C
C
 A
A
 23 a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
others(20): Show 
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0009g0013
 28 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(25): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG01192.hp2
HG01346.hp1
HG01943.hp1
HG02145.hp1
HG02148.hp2
HG02293.hp2
HG02572.hp2
HG02622.hp1
HG02717.hp2
HG02809.hp1
HG03834.hp1
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19089.hp2
NA20300.hp2
 intron_variant MODIFIER c.1224+1388C>A
c.1224+1388C>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84551918
chr1:84552060 T
T
 C
C
 1 a0001c0001t0001g0237
a0001c0001t0001g0237
 1 HG03669.hp2
HG03669.hp2
 intron_variant MODIFIER c.1224+1530T>C
c.1224+1530T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84552060
chr1:84552251 A
A
 G
G
 1 a0001c0001t0001g0170
a0001c0001t0001g0170
 1 HG02897.hp1
HG02897.hp1
 intron_variant MODIFIER c.1224+1721A>G
c.1224+1721A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84552251
chr1:84552280 G
G
 A
A
 27 a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
others(24): Show 
a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0007g0106
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0006c0007t0001g0035
 30 HG00639.hp2
HG00741.hp2
HG01168.hp2
others(27): Show 
HG00639.hp2
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02109.hp1
HG02698.hp1
HG02723.hp2
HG02809.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03130.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18988.hp2
NA19043.hp1
NA19063.hp1
NA19240.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.1224+1750G>A
c.1224+1750G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84552280
chr1:84552638 G
G
 A
A
 1 a0001c0001t0001g0167
a0001c0001t0001g0167
 1 HG02015.hp2
HG02015.hp2
 intron_variant MODIFIER c.1224+2108G>A
c.1224+2108G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84552638
chr1:84552663 T
T
 G
G
 27 a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
others(24): Show 
a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0007g0106
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0006c0007t0001g0035
 30 HG00639.hp2
HG00741.hp2
HG01168.hp2
others(27): Show 
HG00639.hp2
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02109.hp1
HG02698.hp1
HG02723.hp2
HG02809.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03130.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18988.hp2
NA19043.hp1
NA19063.hp1
NA19240.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.1224+2133T>G
c.1224+2133T>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84552663
chr1:84552965 C
C
 T
T
 27 a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
others(24): Show 
a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0007g0106
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0006c0007t0001g0035
 30 HG00639.hp2
HG00741.hp2
HG01168.hp2
others(27): Show 
HG00639.hp2
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02109.hp1
HG02698.hp1
HG02723.hp2
HG02809.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03130.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18988.hp2
NA19043.hp1
NA19063.hp1
NA19240.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.1224+2435C>T
c.1224+2435C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84552965
chr1:84553030 T
T
 C
C
 1 a0001c0003t0004g0051
a0001c0003t0004g0051
 1 NA19058.hp2
NA19058.hp2
 intron_variant MODIFIER c.1224+2500T>C
c.1224+2500T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84553030
chr1:84553252 G
G
 A
A
 1 a0002c0002t0003g0140
a0002c0002t0003g0140
 1 HG02738.hp1
HG02738.hp1
 intron_variant MODIFIER c.1225-2658G>A
c.1225-2658G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84553252
chr1:84553462 G
G
 A
A
 1 a0001c0001t0001g0180
a0001c0001t0001g0180
 1 NA18975.hp2
NA18975.hp2
 intron_variant MODIFIER c.1225-2448G>A
c.1225-2448G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84553462
chr1:84553597 T
T
 C
C
 4 a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
others(1): Show 
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0003c0004t0006g0068
 6 HG02258.hp1
HG02630.hp2
HG02818.hp2
others(3): Show 
HG02258.hp1
HG02630.hp2
HG02818.hp2
HG02895.hp1
HG02965.hp2
HG03225.hp1
 intron_variant MODIFIER c.1225-2313T>C
c.1225-2313T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84553597
chr1:84553746 G
G
 A
A
 1 a0002c0002t0002g0145
a0002c0002t0002g0145
 1 NA18961.hp1
NA18961.hp1
 intron_variant MODIFIER c.1225-2164G>A
c.1225-2164G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84553746
chr1:84553866 G
G
 A
A
 1 a0001c0001t0001g0197
a0001c0001t0001g0197
 1 NA19012.hp2
NA19012.hp2
 intron_variant MODIFIER c.1225-2044G>A
c.1225-2044G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84553866
chr1:84554052 G
G
 A
A
 3 a0002c0002t0002g0111
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0111
a0002c0002t0002g0134
a0002c0002t0002g0135
 3 HG02083.hp1
NA18951.hp2
NA19074.hp2
HG02083.hp1
NA18951.hp2
NA19074.hp2
 intron_variant MODIFIER c.1225-1858G>A
c.1225-1858G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84554052
chr1:84554241 T
T
 TG
TG
 27 a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
others(24): Show 
a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0007g0106
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0006c0007t0001g0035
 30 HG00639.hp2
HG00741.hp2
HG01168.hp2
others(27): Show 
HG00639.hp2
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02109.hp1
HG02698.hp1
HG02723.hp2
HG02809.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03130.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18988.hp2
NA19043.hp1
NA19063.hp1
NA19240.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.1225-1668dupG
c.1225-1668dupG
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 INFO_REALIGN_3_PRIME chr1 84554241
chr1:84554674 A
A
 G
G
 1 a0001c0001t0001g0220
a0001c0001t0001g0220
 1 NA18954.hp1
NA18954.hp1
 intron_variant MODIFIER c.1225-1236A>G
c.1225-1236A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84554674
chr1:84554804 C
C
 T
T
 25 a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
others(22): Show 
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0009g0013
 30 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(27): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG01192.hp2
HG01346.hp1
HG01943.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02293.hp2
HG02572.hp2
HG02622.hp1
HG02717.hp2
HG02809.hp1
HG03195.hp2
HG03834.hp1
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18968.hp1
NA18989.hp2
NA19004.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19089.hp2
NA20300.hp2
 intron_variant MODIFIER c.1225-1106C>T
c.1225-1106C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84554804
chr1:84554813 T
T
 A
A
 18 a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
others(15): Show 
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 25 HG01891.hp2
HG02055.hp1
HG02257.hp2
others(22): Show 
HG01891.hp2
HG02055.hp1
HG02257.hp2
HG02258.hp1
HG02451.hp2
HG02486.hp1
HG02622.hp2
HG02630.hp2
HG02647.hp1
HG02723.hp1
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02922.hp1
HG02965.hp2
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03486.hp1
HG06807.hp2
NA18522.hp2
NA19240.hp1
 intron_variant MODIFIER c.1225-1097T>A
c.1225-1097T>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84554813
chr1:84554954 G
G
 T
T
 27 a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
others(24): Show 
a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0007g0106
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0006c0007t0001g0035
 30 HG00639.hp2
HG00741.hp2
HG01168.hp2
others(27): Show 
HG00639.hp2
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02109.hp1
HG02698.hp1
HG02723.hp2
HG02809.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03130.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18988.hp2
NA19043.hp1
NA19063.hp1
NA19240.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.1225-956G>T
c.1225-956G>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84554954
chr1:84554966 C
C
 T
T
 27 a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
others(24): Show 
a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0007g0106
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0006c0007t0001g0035
 30 HG00639.hp2
HG00741.hp2
HG01168.hp2
others(27): Show 
HG00639.hp2
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02109.hp1
HG02698.hp1
HG02723.hp2
HG02809.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03130.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18988.hp2
NA19043.hp1
NA19063.hp1
NA19240.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.1225-944C>T
c.1225-944C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84554966
chr1:84555086 G
G
 A
A
 4 a0003c0004t0001g0014
a0003c0004t0001g0069
a0003c0004t0001g0071
others(1): Show 
a0003c0004t0001g0014
a0003c0004t0001g0069
a0003c0004t0001g0071
a0003c0004t0001g0074
 5 HG01168.hp2
HG01169.hp2
HG02698.hp1
others(2): Show 
HG01168.hp2
HG01169.hp2
HG02698.hp1
HG04184.hp1
NA20805.hp1
 intron_variant MODIFIER c.1225-824G>A
c.1225-824G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84555086
chr1:84555112 G
G
 A
A
 1 a0001c0001t0001g0237
a0001c0001t0001g0237
 1 HG03669.hp2
HG03669.hp2
 intron_variant MODIFIER c.1225-798G>A
c.1225-798G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84555112
chr1:84555546 G
G
 A
A
 1 a0001c0001t0001g0175
a0001c0001t0001g0175
 1 HG03017.hp1
HG03017.hp1
 intron_variant MODIFIER c.1225-364G>A
c.1225-364G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84555546
chr1:84555594 T
T
 G
G
 35 a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
others(32): Show 
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0128
a0002c0002t0007g0100
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 41 HG00408.hp1
HG00438.hp1
HG00544.hp1
others(38): Show 
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00673.hp1
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02132.hp2
HG02155.hp1
HG04199.hp2
HG04204.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA19012.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19091.hp1
 intron_variant MODIFIER c.1225-316T>G
c.1225-316T>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84555594
chr1:84555674 A
A
 T
T
 6 a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
others(3): Show 
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
 9 HG01070.hp1
HG01071.hp1
HG01081.hp1
others(6): Show 
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01167.hp1
HG01169.hp1
HG02280.hp1
HG02572.hp1
HG03041.hp1
NA19030.hp1
 intron_variant MODIFIER c.1225-236A>T
c.1225-236A>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84555674
chr1:84555874 A
A
 G
G
 29 a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
others(26): Show 
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0012g0082
a0005c0009t0012g0083
 31 HG00280.hp1
HG00609.hp1
HG00621.hp2
others(28): Show 
HG00280.hp1
HG00609.hp1
HG00621.hp2
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01168.hp1
HG01993.hp1
HG02300.hp1
HG02451.hp1
HG02630.hp1
HG02735.hp2
HG02738.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03471.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG04115.hp2
HG04228.hp1
NA18980.hp1
NA18994.hp1
NA19077.hp1
NA19090.hp1
NA21309.hp2
 intron_variant MODIFIER c.1225-36A>G
c.1225-36A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84555874
chr1:84555906 G
G
 A
A
 6 a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
others(3): Show 
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
 6 HG01109.hp1
HG01261.hp1
HG01515.hp2
others(3): Show 
HG01109.hp1
HG01261.hp1
HG01515.hp2
HG01517.hp1
HG02040.hp2
HG03017.hp2
 splice_region_variant&intron_variant LOW c.1225-4G>A
c.1225-4G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 12/13 chr1 84555906
chr1:84556059 T
T
 C
C
 27 a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
others(24): Show 
a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0007g0106
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0006c0007t0001g0035
 30 HG00639.hp2
HG00741.hp2
HG01168.hp2
others(27): Show 
HG00639.hp2
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02109.hp1
HG02698.hp1
HG02723.hp2
HG02809.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03130.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18988.hp2
NA19043.hp1
NA19063.hp1
NA19240.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.1294+80T>C
c.1294+80T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84556059
chr1:84556441 G
G
 A
A
 2 a0004c0005t0001g0012
a0004c0005t0001g0039
a0004c0005t0001g0012
a0004c0005t0001g0039
 3 HG02647.hp1
HG03225.hp2
NA19240.hp1
HG02647.hp1
HG03225.hp2
NA19240.hp1
 intron_variant MODIFIER c.1294+462G>A
c.1294+462G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84556441
chr1:84556445 T
T
 G
G
 27 a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
others(24): Show 
a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0007g0106
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0006c0007t0001g0035
 30 HG00639.hp2
HG00741.hp2
HG01168.hp2
others(27): Show 
HG00639.hp2
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02109.hp1
HG02698.hp1
HG02723.hp2
HG02809.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03130.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18988.hp2
NA19043.hp1
NA19063.hp1
NA19240.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.1294+466T>G
c.1294+466T>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84556445
chr1:84556544 T
T
 C
C
 265 a0001c0001t0001g0001
a0001c0001t0001g0003
a0001c0001t0001g0008
others(262): Show 
a0001c0001t0001g0001
a0001c0001t0001g0003
a0001c0001t0001g0008
a0001c0001t0001g0009
a0001c0001t0001g0025
a0001c0001t0001g0026
a0001c0001t0001g0060
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0163
a0001c0001t0001g0164
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0170
a0001c0001t0001g0171
a0001c0001t0001g0172
a0001c0001t0001g0173
a0001c0001t0001g0174
a0001c0001t0001g0175
a0001c0001t0001g0176
a0001c0001t0001g0177
a0001c0001t0001g0178
a0001c0001t0001g0179
a0001c0001t0001g0180
a0001c0001t0001g0181
a0001c0001t0001g0182
a0001c0001t0001g0183
a0001c0001t0001g0184
a0001c0001t0001g0185
a0001c0001t0001g0186
a0001c0001t0001g0187
a0001c0001t0001g0188
a0001c0001t0001g0189
a0001c0001t0001g0190
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0204
a0001c0001t0001g0205
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0213
a0001c0001t0001g0214
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0001g0219
a0001c0001t0001g0220
a0001c0001t0001g0221
a0001c0001t0001g0222
a0001c0001t0001g0223
a0001c0001t0001g0224
a0001c0001t0001g0225
a0001c0001t0001g0226
a0001c0001t0001g0227
a0001c0001t0001g0228
a0001c0001t0001g0230
a0001c0001t0001g0231
a0001c0001t0001g0232
a0001c0001t0001g0233
a0001c0001t0001g0234
a0001c0001t0001g0235
a0001c0001t0001g0236
a0001c0001t0001g0237
a0001c0001t0001g0238
a0001c0001t0001g0239
a0001c0001t0001g0240
a0001c0001t0001g0241
a0001c0001t0001g0243
a0001c0001t0001g0244
a0001c0001t0001g0245
a0001c0001t0001g0246
a0001c0001t0001g0247
a0001c0001t0001g0248
a0001c0001t0001g0249
a0001c0001t0001g0250
a0001c0001t0001g0251
a0001c0001t0001g0252
a0001c0001t0001g0256
a0001c0001t0001g0257
a0001c0001t0001g0258
a0001c0001t0001g0259
a0001c0001t0001g0264
a0001c0001t0001g0265
a0001c0001t0001g0266
a0001c0001t0001g0267
a0001c0001t0001g0268
a0001c0001t0001g0269
a0001c0001t0007g0017
a0001c0001t0007g0127
a0001c0001t0009g0229
a0001c0001t0013g0165
a0001c0003t0001g0075
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
a0007c0008t0001g0242
 308 HG00140.hp1
HG00140.hp2
HG00280.hp1
others(305): Show 
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00408.hp1
HG00408.hp2
HG00438.hp1
HG00438.hp2
HG00544.hp1
HG00544.hp2
HG00597.hp1
HG00597.hp2
HG00609.hp1
HG00609.hp2
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00673.hp2
HG00735.hp1
HG00735.hp2
HG00738.hp1
HG00738.hp2
HG00741.hp1
HG00741.hp2
HG01070.hp1
HG01070.hp2
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01099.hp2
HG01106.hp1
HG01106.hp2
HG01109.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp1
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01261.hp1
HG01261.hp2
HG01346.hp1
HG01346.hp2
HG01361.hp1
HG01361.hp2
HG01496.hp1
HG01496.hp2
HG01515.hp1
HG01515.hp2
HG01517.hp1
HG01517.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01943.hp2
HG01975.hp1
HG01975.hp2
HG01993.hp1
HG01993.hp2
HG02015.hp1
HG02015.hp2
HG02040.hp1
HG02040.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02080.hp2
HG02083.hp1
HG02083.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02148.hp2
HG02155.hp1
HG02155.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02280.hp2
HG02293.hp1
HG02293.hp2
HG02300.hp1
HG02300.hp2
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02647.hp2
HG02698.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp1
HG02735.hp2
HG02738.hp1
HG02738.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG02976.hp1
HG02976.hp2
HG03017.hp1
HG03017.hp2
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03492.hp2
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03669.hp1
HG03669.hp2
HG03710.hp1
HG03710.hp2
HG03834.hp1
HG03834.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04204.hp2
HG04228.hp1
HG04228.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18612.hp1
NA18612.hp2
NA18747.hp1
NA18747.hp2
NA18940.hp1
NA18940.hp2
NA18942.hp1
NA18942.hp2
NA18944.hp1
NA18944.hp2
NA18945.hp1
NA18945.hp2
NA18946.hp1
NA18946.hp2
NA18948.hp1
NA18948.hp2
NA18950.hp1
NA18950.hp2
NA18951.hp1
NA18951.hp2
NA18952.hp1
NA18952.hp2
NA18954.hp1
NA18954.hp2
NA18955.hp1
NA18955.hp2
NA18957.hp1
NA18957.hp2
NA18961.hp1
NA18961.hp2
NA18962.hp1
NA18962.hp2
NA18965.hp1
NA18965.hp2
NA18967.hp1
NA18967.hp2
NA18968.hp1
NA18968.hp2
NA18969.hp1
NA18969.hp2
NA18971.hp1
NA18971.hp2
NA18975.hp1
NA18975.hp2
NA18979.hp1
NA18979.hp2
NA18980.hp1
NA18980.hp2
NA18983.hp1
NA18983.hp2
NA18986.hp1
NA18986.hp2
NA18987.hp1
NA18987.hp2
NA18988.hp1
NA18988.hp2
NA18989.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18992.hp2
NA18994.hp1
NA18994.hp2
NA19004.hp1
NA19004.hp2
NA19007.hp1
NA19007.hp2
NA19012.hp1
NA19012.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19054.hp2
NA19056.hp1
NA19056.hp2
NA19057.hp1
NA19057.hp2
NA19058.hp1
NA19058.hp2
NA19063.hp1
NA19063.hp2
NA19065.hp1
NA19065.hp2
NA19066.hp1
NA19066.hp2
NA19068.hp1
NA19068.hp2
NA19072.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19075.hp2
NA19077.hp1
NA19077.hp2
NA19079.hp1
NA19079.hp2
NA19083.hp1
NA19083.hp2
NA19084.hp1
NA19084.hp2
NA19089.hp1
NA19089.hp2
NA19090.hp1
NA19090.hp2
NA19091.hp1
NA19091.hp2
NA19240.hp1
NA19240.hp2
NA20300.hp1
NA20300.hp2
NA20805.hp1
NA20805.hp2
NA21309.hp1
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.1294+565T>C
c.1294+565T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84556544
chr1:84556548 T
T
 TA
TA
 143 a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
others(140): Show 
a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
 169 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(166): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00673.hp1
HG00735.hp1
HG00741.hp2
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01975.hp1
HG01993.hp1
HG02015.hp1
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp2
HG02155.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02976.hp1
HG02976.hp2
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04184.hp1
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04228.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18944.hp1
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18968.hp1
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18988.hp2
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19004.hp2
NA19012.hp1
NA19030.hp1
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19056.hp2
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19090.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
NA20300.hp2
NA20805.hp1
NA21309.hp1
NA21309.hp2
 intron_variant MODIFIER c.1294+573dupA
c.1294+573dupA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 INFO_REALIGN_3_PRIME chr1 84556548
chr1:84556551 A
A
 C
C
 6 a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
others(3): Show 
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
 6 HG01109.hp1
HG01261.hp1
HG01515.hp2
others(3): Show 
HG01109.hp1
HG01261.hp1
HG01515.hp2
HG01517.hp1
HG02040.hp2
HG03017.hp2
 intron_variant MODIFIER c.1294+572A>C
c.1294+572A>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84556551
chr1:84556578 G
G
 A
A
 27 a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
others(24): Show 
a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0007g0106
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0006c0007t0001g0035
 30 HG00639.hp2
HG00741.hp2
HG01168.hp2
others(27): Show 
HG00639.hp2
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02109.hp1
HG02698.hp1
HG02723.hp2
HG02809.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03130.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18988.hp2
NA19043.hp1
NA19063.hp1
NA19240.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.1294+599G>A
c.1294+599G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84556578
chr1:84556656 A
A
 C
C
 1 a0001c0003t0004g0040
a0001c0003t0004g0040
 1 HG02055.hp2
HG02055.hp2
 intron_variant MODIFIER c.1294+677A>C
c.1294+677A>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84556656
chr1:84556710 C
C
 CA
CA
 110 a0001c0001t0001g0252
a0001c0001t0001g0267
a0001c0003t0001g0088
others(107): Show 
a0001c0001t0001g0252
a0001c0001t0001g0267
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0009g0013
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0005c0009t0012g0083
a0006c0007t0001g0035
 129 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(126): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00609.hp2
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00673.hp1
HG00735.hp1
HG01106.hp1
HG01109.hp1
HG01109.hp2
HG01168.hp1
HG01192.hp2
HG01261.hp1
HG01346.hp1
HG01515.hp2
HG01517.hp1
HG01891.hp2
HG01943.hp1
HG01993.hp1
HG02015.hp1
HG02040.hp2
HG02055.hp1
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02145.hp1
HG02148.hp2
HG02155.hp1
HG02257.hp2
HG02258.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02717.hp2
HG02723.hp1
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02922.hp1
HG02965.hp2
HG02976.hp1
HG02976.hp2
HG03017.hp2
HG03041.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp2
HG03225.hp1
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04199.hp2
HG04204.hp1
HG04228.hp1
NA18522.hp2
NA18612.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18944.hp1
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18992.hp2
NA18994.hp1
NA19004.hp2
NA19012.hp1
NA19043.hp2
NA19054.hp1
NA19056.hp2
NA19057.hp2
NA19058.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19090.hp1
NA19091.hp1
NA20300.hp2
NA21309.hp2
 intron_variant MODIFIER c.1294+749dupA
c.1294+749dupA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 INFO_REALIGN_3_PRIME chr1 84556710
chr1:84556710 C
C
 CAA
CAA
 31 a0001c0003t0001g0075
a0001c0003t0011g0261
a0002c0002t0005g0022
others(28): Show 
a0001c0003t0001g0075
a0001c0003t0011g0261
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0004c0005t0001g0029
 36 HG00741.hp2
HG01070.hp1
HG01071.hp1
others(33): Show 
HG00741.hp2
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01167.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02145.hp2
HG02258.hp2
HG02280.hp1
HG02572.hp1
HG02698.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03041.hp1
HG03209.hp1
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
HG06807.hp2
NA19030.hp1
NA19063.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.1294+748_1294+749d
others(4): Show 
c.1294+748_1294+749dupAA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 INFO_REALIGN_3_PRIME chr1 84556710
chr1:84556710 C
C
 CAAA
CAAA
 5 a0001c0003t0011g0260
a0001c0006t0008g0016
a0001c0006t0008g0086
others(2): Show 
a0001c0003t0011g0260
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
 6 HG02723.hp2
HG02809.hp2
HG03130.hp1
others(3): Show 
HG02723.hp2
HG02809.hp2
HG03130.hp1
NA18988.hp2
NA19043.hp1
NA19240.hp2
 intron_variant MODIFIER c.1294+747_1294+749d
others(5): Show 
c.1294+747_1294+749dupAAA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 INFO_REALIGN_3_PRIME chr1 84556710
chr1:84556769 C
C
 T
T
 1 a0002c0002t0006g0062
a0002c0002t0006g0062
 1 HG03516.hp1
HG03516.hp1
 intron_variant MODIFIER c.1294+790C>T
c.1294+790C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84556769
chr1:84556840 T
T
 C
C
 29 a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
others(26): Show 
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0012g0082
a0005c0009t0012g0083
 31 HG00280.hp1
HG00609.hp1
HG00621.hp2
others(28): Show 
HG00280.hp1
HG00609.hp1
HG00621.hp2
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01168.hp1
HG01993.hp1
HG02300.hp1
HG02451.hp1
HG02630.hp1
HG02735.hp2
HG02738.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03471.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG04115.hp2
HG04228.hp1
NA18980.hp1
NA18994.hp1
NA19077.hp1
NA19090.hp1
NA21309.hp2
 intron_variant MODIFIER c.1294+861T>C
c.1294+861T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84556840
chr1:84557022 T
T
 C
C
 1 a0001c0001t0001g0185
a0001c0001t0001g0185
 1 HG00642.hp1
HG00642.hp1
 intron_variant MODIFIER c.1294+1043T>C
c.1294+1043T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84557022
chr1:84557073 C
C
 CA
CA
 27 a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
others(24): Show 
a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0007g0106
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0006c0007t0001g0035
 30 HG00639.hp2
HG00741.hp2
HG01168.hp2
others(27): Show 
HG00639.hp2
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02109.hp1
HG02698.hp1
HG02723.hp2
HG02809.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03130.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18988.hp2
NA19043.hp1
NA19063.hp1
NA19240.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.1294+1099dupA
c.1294+1099dupA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 INFO_REALIGN_3_PRIME chr1 84557073
chr1:84557533 C
C
 CA
CA
 9 a0001c0001t0001g0181
a0001c0001t0001g0232
a0001c0001t0001g0243
others(6): Show 
a0001c0001t0001g0181
a0001c0001t0001g0232
a0001c0001t0001g0243
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
 9 HG01109.hp1
HG01261.hp1
HG01515.hp2
others(6): Show 
HG01109.hp1
HG01261.hp1
HG01515.hp2
HG01517.hp1
HG02040.hp2
HG03017.hp2
HG04115.hp1
HG04228.hp2
NA18965.hp2
 intron_variant MODIFIER c.1294+1574dupA
c.1294+1574dupA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 INFO_REALIGN_3_PRIME chr1 84557533
chr1:84557533 CAAA
CAAA
 C
C
 27 a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
others(24): Show 
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0012g0082
a0005c0009t0012g0083
 29 HG00280.hp1
HG00609.hp1
HG00621.hp2
others(26): Show 
HG00280.hp1
HG00609.hp1
HG00621.hp2
HG00735.hp1
HG01106.hp1
HG01168.hp1
HG01993.hp1
HG02300.hp1
HG02451.hp1
HG02630.hp1
HG02735.hp2
HG02738.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03471.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03579.hp2
HG03669.hp1
HG04115.hp2
HG04228.hp1
NA18980.hp1
NA18994.hp1
NA19077.hp1
NA19090.hp1
NA21309.hp2
 intron_variant MODIFIER c.1294+1572_1294+157
others(7): Show 
c.1294+1572_1294+1574delAAA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 INFO_REALIGN_3_PRIME chr1 84557533
chr1:84557544 A
A
 G
G
 19 a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
others(16): Show 
a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
 21 HG00741.hp2
HG01168.hp2
HG01169.hp2
others(18): Show 
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02698.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.1294+1565A>G
c.1294+1565A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84557544
chr1:84557550 A
A
 G
G
 3 a0001c0003t0004g0052
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0003t0004g0052
a0001c0003t0011g0260
a0001c0003t0011g0261
 3 NA18968.hp1
NA18988.hp2
NA19063.hp1
NA18968.hp1
NA18988.hp2
NA19063.hp1
 intron_variant MODIFIER c.1294+1571A>G
c.1294+1571A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84557550
chr1:84557551 A
A
 G
G
 55 a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
others(52): Show 
a0001c0003t0001g0075
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0009g0013
a0001c0006t0014g0061
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0007g0106
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0006c0007t0001g0035
 65 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(62): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG00639.hp2
HG00741.hp2
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01167.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01192.hp2
HG01346.hp1
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01943.hp1
HG01975.hp1
HG02055.hp2
HG02109.hp1
HG02145.hp1
HG02145.hp2
HG02148.hp2
HG02258.hp2
HG02280.hp1
HG02293.hp2
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02698.hp1
HG02717.hp2
HG02723.hp2
HG02809.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03041.hp1
HG03195.hp2
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG03834.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18989.hp2
NA19004.hp2
NA19030.hp1
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19089.hp2
NA20300.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.1294+1572A>G
c.1294+1572A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84557551
chr1:84557552 A
A
 G
G
 51 a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
others(48): Show 
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0128
a0002c0002t0007g0100
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 63 HG00408.hp1
HG00438.hp1
HG00544.hp1
others(60): Show 
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00673.hp1
HG01891.hp2
HG02015.hp1
HG02055.hp1
HG02080.hp1
HG02083.hp1
HG02132.hp2
HG02155.hp1
HG02257.hp2
HG02451.hp2
HG02486.hp1
HG02622.hp2
HG02647.hp1
HG02723.hp1
HG02809.hp2
HG02818.hp1
HG02922.hp1
HG02976.hp1
HG03041.hp2
HG03130.hp1
HG03195.hp1
HG03209.hp2
HG03225.hp2
HG03486.hp1
HG04199.hp2
HG04204.hp1
HG06807.hp2
NA18522.hp2
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA19012.hp1
NA19043.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19091.hp1
NA19240.hp1
NA19240.hp2
 intron_variant MODIFIER c.1294+1573A>G
c.1294+1573A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84557552
chr1:84557552 AAG
AAG
 A
A
 34 a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0004g0002
others(31): Show 
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
 42 HG00140.hp1
HG00597.hp2
HG00621.hp1
others(39): Show 
HG00140.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01167.hp1
HG01169.hp1
HG01192.hp2
HG01346.hp1
HG01943.hp1
HG02055.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp2
HG02258.hp2
HG02280.hp1
HG02293.hp2
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02717.hp2
HG02809.hp1
HG03041.hp1
HG03195.hp2
HG03834.hp1
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18988.hp2
NA18989.hp2
NA19004.hp2
NA19030.hp1
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19063.hp1
NA19089.hp2
 intron_variant MODIFIER c.1294+1575_1294+157
others(6): Show 
c.1294+1575_1294+1576delGA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 INFO_REALIGN_3_PRIME chr1 84557552
chr1:84557553 AG
AG
 A
A
 70 a0001c0003t0001g0075
a0001c0003t0003g0110
a0002c0002t0002g0006
others(67): Show 
a0001c0003t0001g0075
a0001c0003t0003g0110
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0128
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0006c0007t0001g0035
 83 HG00408.hp1
HG00438.hp1
HG00544.hp1
others(80): Show 
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00639.hp2
HG00673.hp1
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01891.hp2
HG01975.hp1
HG02015.hp1
HG02055.hp1
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02155.hp1
HG02257.hp2
HG02451.hp2
HG02486.hp1
HG02622.hp2
HG02647.hp1
HG02698.hp1
HG02723.hp1
HG02818.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp1
HG03209.hp2
HG03225.hp2
HG03486.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG06807.hp1
HG06807.hp2
NA18522.hp2
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA19012.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19091.hp1
NA19240.hp1
NA20300.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.1294+1575delG
c.1294+1575delG
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84557553
chr1:84557554 G
G
 A
A
 8 a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
others(5): Show 
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0003c0004t0006g0068
 11 HG02258.hp1
HG02630.hp2
HG02723.hp2
others(8): Show 
HG02258.hp1
HG02630.hp2
HG02723.hp2
HG02809.hp2
HG02818.hp2
HG02895.hp1
HG02965.hp2
HG03130.hp1
HG03225.hp1
NA19043.hp1
NA19240.hp2
 intron_variant MODIFIER c.1294+1575G>A
c.1294+1575G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84557554
chr1:84557582 G
G
 A
A
 1 a0001c0003t0004g0052
a0001c0003t0004g0052
 1 NA18968.hp1
NA18968.hp1
 intron_variant MODIFIER c.1294+1603G>A
c.1294+1603G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84557582
chr1:84557584 G
G
 A
A
 3 a0002c0002t0005g0150
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0005g0150
a0002c0002t0005g0154
a0002c0002t0005g0155
 3 HG01099.hp1
HG02145.hp2
HG02258.hp2
HG01099.hp1
HG02145.hp2
HG02258.hp2
 intron_variant MODIFIER c.1294+1605G>A
c.1294+1605G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84557584
chr1:84557644 A
A
 G
G
 9 a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
others(6): Show 
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
 12 HG01070.hp1
HG01071.hp1
HG01081.hp1
others(9): Show 
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01167.hp1
HG01169.hp1
HG02145.hp2
HG02258.hp2
HG02280.hp1
HG02572.hp1
HG03041.hp1
NA19030.hp1
 intron_variant MODIFIER c.1294+1665A>G
c.1294+1665A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84557644
chr1:84557857 C
C
 CA
CA
 36 a0001c0003t0004g0057
a0001c0003t0006g0004
a0001c0003t0006g0027
others(33): Show 
a0001c0003t0004g0057
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0109
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0012g0082
a0003c0004t0006g0068
a0005c0009t0012g0083
a0006c0007t0001g0035
 40 HG00280.hp1
HG00609.hp1
HG00621.hp2
others(37): Show 
HG00280.hp1
HG00609.hp1
HG00621.hp2
HG00639.hp2
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01168.hp1
HG01993.hp1
HG02145.hp2
HG02258.hp1
HG02258.hp2
HG02300.hp1
HG02451.hp1
HG02622.hp1
HG02630.hp1
HG02630.hp2
HG02735.hp2
HG02738.hp1
HG02818.hp2
HG02895.hp1
HG02965.hp2
HG02976.hp2
HG03139.hp1
HG03225.hp1
HG03471.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG04115.hp2
HG04228.hp1
NA18980.hp1
NA18994.hp1
NA19077.hp1
NA19090.hp1
NA21309.hp2
 intron_variant MODIFIER c.1294+1892dupA
c.1294+1892dupA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 INFO_REALIGN_3_PRIME chr1 84557857
chr1:84557872 G
G
 A
A
 2 a0001c0001t0007g0017
a0001c0001t0007g0127
a0001c0001t0007g0017
a0001c0001t0007g0127
 3 HG01255.hp1
HG01943.hp2
HG02293.hp1
HG01255.hp1
HG01943.hp2
HG02293.hp1
 intron_variant MODIFIER c.1294+1893G>A
c.1294+1893G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84557872
chr1:84557905 T
T
 G
G
 116 a0001c0001t0001g0001
a0001c0001t0001g0003
a0001c0001t0001g0008
others(113): Show 
a0001c0001t0001g0001
a0001c0001t0001g0003
a0001c0001t0001g0008
a0001c0001t0001g0009
a0001c0001t0001g0025
a0001c0001t0001g0026
a0001c0001t0001g0060
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0163
a0001c0001t0001g0164
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0170
a0001c0001t0001g0171
a0001c0001t0001g0172
a0001c0001t0001g0173
a0001c0001t0001g0174
a0001c0001t0001g0175
a0001c0001t0001g0176
a0001c0001t0001g0177
a0001c0001t0001g0178
a0001c0001t0001g0179
a0001c0001t0001g0180
a0001c0001t0001g0181
a0001c0001t0001g0182
a0001c0001t0001g0183
a0001c0001t0001g0184
a0001c0001t0001g0185
a0001c0001t0001g0186
a0001c0001t0001g0187
a0001c0001t0001g0188
a0001c0001t0001g0189
a0001c0001t0001g0190
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0204
a0001c0001t0001g0205
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0213
a0001c0001t0001g0214
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0001g0219
a0001c0001t0001g0220
a0001c0001t0001g0221
a0001c0001t0001g0222
a0001c0001t0001g0223
a0001c0001t0001g0224
a0001c0001t0001g0225
a0001c0001t0001g0226
a0001c0001t0001g0227
a0001c0001t0001g0228
a0001c0001t0001g0230
a0001c0001t0001g0231
a0001c0001t0001g0232
a0001c0001t0001g0233
a0001c0001t0001g0234
a0001c0001t0001g0235
a0001c0001t0001g0236
a0001c0001t0001g0237
a0001c0001t0001g0238
a0001c0001t0001g0239
a0001c0001t0001g0240
a0001c0001t0001g0241
a0001c0001t0001g0243
a0001c0001t0001g0244
a0001c0001t0001g0245
a0001c0001t0001g0246
a0001c0001t0001g0247
a0001c0001t0001g0248
a0001c0001t0001g0249
a0001c0001t0001g0250
a0001c0001t0001g0251
a0001c0001t0001g0252
a0001c0001t0001g0256
a0001c0001t0001g0257
a0001c0001t0001g0258
a0001c0001t0001g0259
a0001c0001t0001g0264
a0001c0001t0001g0265
a0001c0001t0001g0266
a0001c0001t0001g0267
a0001c0001t0001g0268
a0001c0001t0001g0269
a0001c0001t0007g0017
a0001c0001t0007g0127
a0001c0001t0009g0229
a0001c0001t0013g0165
a0007c0008t0001g0242
 133 HG00140.hp2
HG00280.hp2
HG00408.hp2
others(130): Show 
HG00140.hp2
HG00280.hp2
HG00408.hp2
HG00438.hp2
HG00544.hp2
HG00597.hp1
HG00609.hp2
HG00642.hp1
HG00642.hp2
HG00673.hp2
HG00735.hp2
HG00738.hp1
HG00738.hp2
HG00741.hp1
HG01070.hp2
HG01071.hp2
HG01081.hp2
HG01099.hp2
HG01106.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp1
HG01255.hp1
HG01255.hp2
HG01261.hp2
HG01346.hp2
HG01361.hp1
HG01496.hp1
HG01515.hp1
HG01517.hp2
HG01943.hp2
HG01975.hp2
HG01993.hp2
HG02015.hp2
HG02040.hp1
HG02080.hp2
HG02083.hp2
HG02109.hp2
HG02132.hp1
HG02148.hp1
HG02155.hp2
HG02257.hp1
HG02280.hp2
HG02293.hp1
HG02300.hp2
HG02486.hp2
HG02647.hp2
HG02698.hp2
HG02717.hp1
HG02735.hp1
HG02738.hp2
HG02886.hp1
HG02897.hp1
HG02970.hp2
HG03017.hp1
HG03130.hp2
HG03453.hp1
HG03453.hp2
HG03491.hp2
HG03492.hp2
HG03540.hp2
HG03579.hp1
HG03669.hp2
HG03710.hp1
HG03834.hp2
HG04115.hp1
HG04184.hp2
HG04204.hp2
HG04228.hp2
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18940.hp1
NA18942.hp2
NA18944.hp2
NA18945.hp2
NA18946.hp1
NA18948.hp2
NA18950.hp2
NA18951.hp1
NA18952.hp2
NA18954.hp1
NA18955.hp2
NA18957.hp2
NA18961.hp2
NA18962.hp2
NA18965.hp2
NA18967.hp1
NA18968.hp2
NA18969.hp1
NA18969.hp2
NA18971.hp1
NA18971.hp2
NA18975.hp1
NA18975.hp2
NA18979.hp1
NA18980.hp2
NA18983.hp2
NA18986.hp1
NA18987.hp2
NA18988.hp1
NA18989.hp1
NA18990.hp2
NA18992.hp2
NA18994.hp2
NA19004.hp1
NA19007.hp1
NA19007.hp2
NA19012.hp2
NA19030.hp2
NA19054.hp2
NA19056.hp1
NA19057.hp1
NA19058.hp1
NA19063.hp2
NA19065.hp1
NA19065.hp2
NA19066.hp1
NA19066.hp2
NA19068.hp1
NA19068.hp2
NA19072.hp1
NA19075.hp2
NA19077.hp2
NA19079.hp2
NA19083.hp1
NA19084.hp2
NA19089.hp1
NA19090.hp2
NA19091.hp2
NA20300.hp1
NA20805.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.1294+1926T>G
c.1294+1926T>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84557905
chr1:84557977 C
C
 A
A
 6 a0001c0001t0001g0003
a0001c0001t0001g0234
a0001c0001t0001g0238
others(3): Show 
a0001c0001t0001g0003
a0001c0001t0001g0234
a0001c0001t0001g0238
a0001c0001t0001g0240
a0001c0001t0001g0241
a0001c0001t0001g0250
 9 HG00544.hp2
HG02040.hp1
NA18945.hp2
others(6): Show 
HG00544.hp2
HG02040.hp1
NA18945.hp2
NA18968.hp2
NA18969.hp1
NA18971.hp2
NA18986.hp1
NA19007.hp1
NA19091.hp2
 intron_variant MODIFIER c.1294+1998C>A
c.1294+1998C>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84557977
chr1:84558020 G
G
 A
A
 9 a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
others(6): Show 
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
 12 HG01070.hp1
HG01071.hp1
HG01081.hp1
others(9): Show 
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01167.hp1
HG01169.hp1
HG02145.hp2
HG02258.hp2
HG02280.hp1
HG02572.hp1
HG03041.hp1
NA19030.hp1
 intron_variant MODIFIER c.1294+2041G>A
c.1294+2041G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84558020
chr1:84558077 A
A
 G
G
 35 a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
others(32): Show 
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0128
a0002c0002t0007g0100
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 41 HG00408.hp1
HG00438.hp1
HG00544.hp1
others(38): Show 
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00673.hp1
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02132.hp2
HG02155.hp1
HG04199.hp2
HG04204.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA19012.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19091.hp1
 intron_variant MODIFIER c.1294+2098A>G
c.1294+2098A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84558077
chr1:84558221 T
T
 C
C
 1 a0001c0003t0004g0040
a0001c0003t0004g0040
 1 HG02055.hp2
HG02055.hp2
 intron_variant MODIFIER c.1294+2242T>C
c.1294+2242T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84558221
chr1:84558246 A
A
 G
G
 1 a0001c0001t0001g0180
a0001c0001t0001g0180
 1 NA18975.hp2
NA18975.hp2
 intron_variant MODIFIER c.1294+2267A>G
c.1294+2267A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84558246
chr1:84558272 T
T
 C
C
 35 a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
others(32): Show 
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0128
a0002c0002t0007g0100
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 41 HG00408.hp1
HG00438.hp1
HG00544.hp1
others(38): Show 
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00673.hp1
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02132.hp2
HG02155.hp1
HG04199.hp2
HG04204.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA19012.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19091.hp1
 intron_variant MODIFIER c.1294+2293T>C
c.1294+2293T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84558272
chr1:84558284 G
G
 T
T
 19 a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
others(16): Show 
a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
 21 HG00741.hp2
HG01168.hp2
HG01169.hp2
others(18): Show 
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02698.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.1294+2305G>T
c.1294+2305G>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84558284
chr1:84558293 C
C
 CT
CT
 5 a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
others(2): Show 
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0003c0004t0001g0015
 7 HG02723.hp2
HG02809.hp2
HG02895.hp2
others(4): Show 
HG02723.hp2
HG02809.hp2
HG02895.hp2
HG02897.hp2
HG03130.hp1
NA19043.hp1
NA19240.hp2
 intron_variant MODIFIER c.1294+2328dupT
c.1294+2328dupT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 INFO_REALIGN_3_PRIME chr1 84558293
chr1:84558293 CT
CT
 C
C
 30 a0001c0001t0001g0228
a0002c0002t0003g0020
a0002c0002t0003g0021
others(27): Show 
a0001c0001t0001g0228
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0012g0082
a0005c0009t0012g0083
 32 HG00280.hp1
HG00609.hp1
HG00621.hp2
others(29): Show 
HG00280.hp1
HG00609.hp1
HG00621.hp2
HG00735.hp1
HG01081.hp2
HG01106.hp1
HG01109.hp2
HG01168.hp1
HG01993.hp1
HG02300.hp1
HG02451.hp1
HG02630.hp1
HG02735.hp2
HG02738.hp1
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03471.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG04115.hp2
HG04228.hp1
NA18980.hp1
NA18994.hp1
NA19077.hp1
NA19090.hp1
NA21309.hp2
 intron_variant MODIFIER c.1294+2328delT
c.1294+2328delT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 INFO_REALIGN_3_PRIME chr1 84558293
chr1:84558415 A
A
 G
G
 4 a0002c0002t0002g0018
a0002c0002t0002g0117
a0002c0002t0002g0120
others(1): Show 
a0002c0002t0002g0018
a0002c0002t0002g0117
a0002c0002t0002g0120
a0002c0002t0002g0122
 5 NA18967.hp2
NA18992.hp1
NA19012.hp1
others(2): Show 
NA18967.hp2
NA18992.hp1
NA19012.hp1
NA19084.hp1
NA19091.hp1
 intron_variant MODIFIER c.1294+2436A>G
c.1294+2436A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84558415
chr1:84558444 T
T
 C
C
 2 a0001c0001t0001g0219
a0001c0001t0001g0224
a0001c0001t0001g0219
a0001c0001t0001g0224
 2 HG03834.hp2
NA18994.hp2
HG03834.hp2
NA18994.hp2
 intron_variant MODIFIER c.1294+2465T>C
c.1294+2465T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84558444
chr1:84558445 A
A
 G
G
 2 a0001c0001t0001g0219
a0001c0001t0001g0224
a0001c0001t0001g0219
a0001c0001t0001g0224
 2 HG03834.hp2
NA18994.hp2
HG03834.hp2
NA18994.hp2
 intron_variant MODIFIER c.1294+2466A>G
c.1294+2466A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84558445
chr1:84558538 G
G
 A
A
 2 a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0003t0011g0260
a0001c0003t0011g0261
 2 NA18988.hp2
NA19063.hp1
NA18988.hp2
NA19063.hp1
 intron_variant MODIFIER c.1294+2559G>A
c.1294+2559G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84558538
chr1:84558579 C
C
 T
T
 116 a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
others(113): Show 
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
 139 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(136): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00673.hp1
HG00735.hp1
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01169.hp1
HG01192.hp2
HG01346.hp1
HG01891.hp2
HG01943.hp1
HG01993.hp1
HG02015.hp1
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp2
HG02155.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02717.hp2
HG02723.hp1
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02922.hp1
HG02965.hp2
HG02976.hp1
HG02976.hp2
HG03041.hp1
HG03041.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04199.hp2
HG04204.hp1
HG04228.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18944.hp1
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18968.hp1
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19004.hp2
NA19012.hp1
NA19030.hp1
NA19043.hp2
NA19054.hp1
NA19056.hp2
NA19057.hp2
NA19058.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19090.hp1
NA19091.hp1
NA19240.hp1
NA20300.hp2
NA21309.hp2
 intron_variant MODIFIER c.1294+2600C>T
c.1294+2600C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84558579
chr1:84558604 TA
TA
 T
T
 26 a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
others(23): Show 
a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0002c0002t0007g0106
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0006c0007t0001g0035
 29 HG00639.hp2
HG00741.hp2
HG01168.hp2
others(26): Show 
HG00639.hp2
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02109.hp1
HG02698.hp1
HG02809.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03130.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18988.hp2
NA19043.hp1
NA19063.hp1
NA19240.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.1294+2637delA
c.1294+2637delA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 INFO_REALIGN_3_PRIME chr1 84558604
chr1:84558718 T
T
 C
C
 1 a0001c0001t0001g0210
a0001c0001t0001g0210
 1 HG02109.hp2
HG02109.hp2
 intron_variant MODIFIER c.1294+2739T>C
c.1294+2739T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84558718
chr1:84558773 C
C
 T
T
 25 a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
others(22): Show 
a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
 28 HG00741.hp2
HG01168.hp2
HG01169.hp2
others(25): Show 
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02698.hp1
HG02723.hp2
HG02809.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03130.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18988.hp2
NA19043.hp1
NA19063.hp1
NA19240.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.1294+2794C>T
c.1294+2794C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84558773
chr1:84558827 A
A
 G
G
 1 a0001c0003t0001g0075
a0001c0003t0001g0075
 1 HG02922.hp2
HG02922.hp2
 intron_variant MODIFIER c.1294+2848A>G
c.1294+2848A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84558827
chr1:84558927 T
T
 A
A
 1 a0001c0003t0001g0075
a0001c0003t0001g0075
 1 HG02922.hp2
HG02922.hp2
 intron_variant MODIFIER c.1294+2948T>A
c.1294+2948T>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84558927
chr1:84558969 G
G
 A
A
 4 a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
others(1): Show 
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0003c0004t0006g0068
 6 HG02258.hp1
HG02630.hp2
HG02818.hp2
others(3): Show 
HG02258.hp1
HG02630.hp2
HG02818.hp2
HG02895.hp1
HG02965.hp2
HG03225.hp1
 intron_variant MODIFIER c.1294+2990G>A
c.1294+2990G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84558969
chr1:84559007 C
C
 T
T
 1 a0001c0001t0001g0203
a0001c0001t0001g0203
 1 NA19054.hp2
NA19054.hp2
 intron_variant MODIFIER c.1294+3028C>T
c.1294+3028C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84559007
chr1:84559066 C
C
 G
G
 14 a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
others(11): Show 
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 19 HG01891.hp2
HG02055.hp1
HG02257.hp2
others(16): Show 
HG01891.hp2
HG02055.hp1
HG02257.hp2
HG02451.hp2
HG02486.hp1
HG02622.hp2
HG02647.hp1
HG02723.hp1
HG02818.hp1
HG02922.hp1
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp2
HG03225.hp2
HG03486.hp1
HG06807.hp2
NA18522.hp2
NA19240.hp1
 intron_variant MODIFIER c.1294+3087C>G
c.1294+3087C>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84559066
chr1:84559348 C
C
 T
T
 1 a0002c0002t0003g0149
a0002c0002t0003g0149
 1 HG03710.hp2
HG03710.hp2
 intron_variant MODIFIER c.1294+3369C>T
c.1294+3369C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84559348
chr1:84559466 C
C
 T
T
 1 a0001c0001t0001g0213
a0001c0001t0001g0213
 1 NA19072.hp1
NA19072.hp1
 intron_variant MODIFIER c.1294+3487C>T
c.1294+3487C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84559466
chr1:84559604 G
G
 A
A
 1 a0002c0002t0006g0062
a0002c0002t0006g0062
 1 HG03516.hp1
HG03516.hp1
 intron_variant MODIFIER c.1294+3625G>A
c.1294+3625G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84559604
chr1:84559818 C
C
 T
T
 1 a0001c0001t0001g0161
a0001c0001t0001g0161
 1 HG02647.hp2
HG02647.hp2
 intron_variant MODIFIER c.1294+3839C>T
c.1294+3839C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84559818
chr1:84559822 T
T
 G
G
 1 a0001c0003t0003g0102
a0001c0003t0003g0102
 1 HG03195.hp2
HG03195.hp2
 intron_variant MODIFIER c.1294+3843T>G
c.1294+3843T>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84559822
chr1:84559844 G
G
 A
A
 1 a0006c0007t0001g0035
a0006c0007t0001g0035
 1 HG00639.hp2
HG00639.hp2
 intron_variant MODIFIER c.1294+3865G>A
c.1294+3865G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84559844
chr1:84560093 AAAAAAAA
others(5): Show 
AAAAAAAAGAAAG
 A
A
 1 a0002c0002t0002g0116
a0002c0002t0002g0116
 1 NA18944.hp1
NA18944.hp1
 intron_variant MODIFIER c.1294+4118_1294+412
others(16): Show 
c.1294+4118_1294+4129delAAAAGAAAGAAA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 INFO_REALIGN_3_PRIME chr1 84560093
chr1:84560096 AAAAAGAA
others(6): Show 
AAAAAGAAAGAAAG
 A
A
 2 a0001c0003t0004g0050
a0002c0002t0007g0130
a0001c0003t0004g0050
a0002c0002t0007g0130
 2 NA18962.hp1
NA19057.hp2
NA18962.hp1
NA19057.hp2
 intron_variant MODIFIER c.1294+4121_1294+413
others(17): Show 
c.1294+4121_1294+4133delAGAAAGAAAGAAA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 INFO_REALIGN_3_PRIME chr1 84560096
chr1:84560097 A
A
 AAAGAAAG
others(4): Show 
AAAGAAAGAAAG
 2 a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0003t0011g0260
a0001c0003t0011g0261
 2 NA18988.hp2
NA19063.hp1
NA18988.hp2
NA19063.hp1
 intron_variant MODIFIER c.1294+4120_1294+412
others(15): Show 
c.1294+4120_1294+4121insGAAAGAAAGAA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 INFO_REALIGN_3_PRIME chr1 84560097
chr1:84560097 AAAAG
AAAAG
 A
A
 106 a0001c0001t0001g0001
a0001c0001t0001g0003
a0001c0001t0001g0008
others(103): Show 
a0001c0001t0001g0001
a0001c0001t0001g0003
a0001c0001t0001g0008
a0001c0001t0001g0009
a0001c0001t0001g0025
a0001c0001t0001g0026
a0001c0001t0001g0060
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0163
a0001c0001t0001g0164
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0170
a0001c0001t0001g0171
a0001c0001t0001g0172
a0001c0001t0001g0173
a0001c0001t0001g0174
a0001c0001t0001g0175
a0001c0001t0001g0176
a0001c0001t0001g0177
a0001c0001t0001g0178
a0001c0001t0001g0179
a0001c0001t0001g0180
a0001c0001t0001g0181
a0001c0001t0001g0182
a0001c0001t0001g0184
a0001c0001t0001g0185
a0001c0001t0001g0189
a0001c0001t0001g0190
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0198
a0001c0001t0001g0200
a0001c0001t0001g0203
a0001c0001t0001g0204
a0001c0001t0001g0205
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0213
a0001c0001t0001g0214
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0001g0219
a0001c0001t0001g0220
a0001c0001t0001g0221
a0001c0001t0001g0222
a0001c0001t0001g0223
a0001c0001t0001g0224
a0001c0001t0001g0225
a0001c0001t0001g0227
a0001c0001t0001g0228
a0001c0001t0001g0231
a0001c0001t0001g0232
a0001c0001t0001g0233
a0001c0001t0001g0234
a0001c0001t0001g0235
a0001c0001t0001g0236
a0001c0001t0001g0237
a0001c0001t0001g0238
a0001c0001t0001g0239
a0001c0001t0001g0240
a0001c0001t0001g0241
a0001c0001t0001g0243
a0001c0001t0001g0244
a0001c0001t0001g0245
a0001c0001t0001g0247
a0001c0001t0001g0249
a0001c0001t0001g0250
a0001c0001t0001g0251
a0001c0001t0001g0252
a0001c0001t0001g0256
a0001c0001t0001g0257
a0001c0001t0001g0258
a0001c0001t0001g0259
a0001c0001t0001g0264
a0001c0001t0001g0265
a0001c0001t0001g0266
a0001c0001t0001g0267
a0001c0001t0001g0268
a0001c0001t0001g0269
a0001c0001t0007g0017
a0001c0001t0007g0127
a0001c0001t0009g0229
a0001c0001t0013g0165
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
 123 HG00280.hp2
HG00408.hp2
HG00438.hp2
others(120): Show 
HG00280.hp2
HG00408.hp2
HG00438.hp2
HG00544.hp2
HG00597.hp1
HG00609.hp2
HG00642.hp1
HG00642.hp2
HG00673.hp2
HG00735.hp2
HG00738.hp1
HG00738.hp2
HG01070.hp2
HG01081.hp2
HG01099.hp2
HG01106.hp2
HG01109.hp1
HG01192.hp1
HG01255.hp1
HG01255.hp2
HG01261.hp1
HG01261.hp2
HG01346.hp2
HG01496.hp1
HG01515.hp1
HG01515.hp2
HG01517.hp1
HG01517.hp2
HG01943.hp2
HG01975.hp2
HG01993.hp2
HG02015.hp2
HG02040.hp1
HG02040.hp2
HG02080.hp2
HG02083.hp2
HG02132.hp1
HG02148.hp1
HG02257.hp1
HG02280.hp2
HG02293.hp1
HG02300.hp2
HG02486.hp2
HG02647.hp2
HG02735.hp1
HG02738.hp2
HG02886.hp1
HG02897.hp1
HG02970.hp2
HG03017.hp1
HG03017.hp2
HG03130.hp2
HG03453.hp1
HG03491.hp2
HG03492.hp2
HG03540.hp2
HG03669.hp2
HG03710.hp1
HG03834.hp2
HG04115.hp1
HG04184.hp2
HG04204.hp2
HG04228.hp2
NA18522.hp1
NA18612.hp1
NA18747.hp1
NA18940.hp1
NA18942.hp2
NA18944.hp2
NA18945.hp2
NA18946.hp1
NA18948.hp2
NA18950.hp2
NA18952.hp2
NA18954.hp1
NA18955.hp2
NA18957.hp2
NA18961.hp2
NA18965.hp2
NA18967.hp1
NA18968.hp2
NA18969.hp1
NA18969.hp2
NA18971.hp1
NA18971.hp2
NA18975.hp1
NA18975.hp2
NA18979.hp1
NA18980.hp2
NA18983.hp2
NA18986.hp1
NA18987.hp2
NA18989.hp1
NA18990.hp2
NA18992.hp2
NA18994.hp2
NA19004.hp1
NA19007.hp1
NA19007.hp2
NA19030.hp2
NA19054.hp2
NA19056.hp1
NA19057.hp1
NA19058.hp1
NA19063.hp2
NA19065.hp1
NA19065.hp2
NA19066.hp1
NA19066.hp2
NA19068.hp1
NA19068.hp2
NA19072.hp1
NA19075.hp2
NA19077.hp2
NA19079.hp2
NA19083.hp1
NA19084.hp2
NA19089.hp1
NA19090.hp2
NA19091.hp2
NA20300.hp1
NA20805.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.1294+4151_1294+415
others(8): Show 
c.1294+4151_1294+4154delAAAG
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 INFO_REALIGN_3_PRIME chr1 84560097
chr1:84560097 AAAAGAAA
others(1): Show 
AAAAGAAAG
 A
A
 68 a0001c0001t0001g0188
a0001c0003t0003g0102
a0001c0003t0004g0002
others(65): Show 
a0001c0001t0001g0188
a0001c0003t0003g0102
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0049
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0002c0002t0002g0019
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0109
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0012g0082
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 85 HG00280.hp1
HG00597.hp2
HG00609.hp1
others(82): Show 
HG00280.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp2
HG00639.hp1
HG00735.hp1
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01169.hp1
HG01192.hp2
HG01346.hp1
HG01891.hp2
HG01943.hp1
HG01993.hp1
HG02055.hp1
HG02055.hp2
HG02148.hp2
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02723.hp1
HG02735.hp2
HG02738.hp1
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02922.hp1
HG02965.hp2
HG02976.hp1
HG02976.hp2
HG03041.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03579.hp2
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04228.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18945.hp1
NA18948.hp1
NA18968.hp1
NA18980.hp1
NA18989.hp2
NA18994.hp1
NA19004.hp2
NA19030.hp1
NA19054.hp1
NA19074.hp1
NA19077.hp1
NA19089.hp2
NA19090.hp1
NA19240.hp1
NA21309.hp2
 intron_variant MODIFIER c.1294+4147_1294+415
others(12): Show 
c.1294+4147_1294+4154delAAAGAAAG
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 INFO_REALIGN_3_PRIME chr1 84560097
chr1:84560097 AAAAGAAA
others(5): Show 
AAAAGAAAGAAAG
 A
A
 31 a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
others(28): Show 
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0128
a0002c0002t0005g0024
a0002c0002t0007g0100
a0002c0002t0007g0129
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 37 HG00408.hp1
HG00438.hp1
HG00544.hp1
others(34): Show 
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00673.hp1
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02132.hp2
HG02155.hp1
HG02280.hp1
HG03041.hp1
HG04199.hp2
HG04204.hp1
NA18747.hp2
NA18946.hp2
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18965.hp1
NA18979.hp2
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA19012.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp2
NA19075.hp1
NA19083.hp2
NA19084.hp1
NA19091.hp1
 intron_variant MODIFIER c.1294+4143_1294+415
others(16): Show 
c.1294+4143_1294+4154delAAAGAAAGAAAG
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 INFO_REALIGN_3_PRIME chr1 84560097
chr1:84560098 AAAG
AAAG
 A
A
 8 a0001c0001t0001g0162
a0001c0001t0001g0183
a0001c0001t0001g0197
others(5): Show 
a0001c0001t0001g0162
a0001c0001t0001g0183
a0001c0001t0001g0197
a0001c0001t0001g0199
a0001c0001t0001g0210
a0001c0001t0001g0230
a0001c0001t0001g0246
a0001c0001t0001g0248
 8 HG00140.hp2
HG00741.hp1
HG01071.hp2
others(5): Show 
HG00140.hp2
HG00741.hp1
HG01071.hp2
HG02109.hp2
HG02155.hp2
HG02698.hp2
NA18988.hp1
NA19012.hp2
 intron_variant MODIFIER c.1294+4122_1294+412
others(7): Show 
c.1294+4122_1294+4124delGAA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 INFO_REALIGN_3_PRIME chr1 84560098
chr1:84560098 AAAGAAAG
AAAGAAAG
 A
A
 11 a0001c0001t0001g0187
a0001c0003t0003g0105
a0001c0003t0004g0044
others(8): Show 
a0001c0001t0001g0187
a0001c0003t0003g0105
a0001c0003t0004g0044
a0001c0003t0004g0048
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0002c0002t0003g0108
a0002c0002t0005g0154
a0005c0009t0012g0083
 11 HG00140.hp1
HG00621.hp1
HG02145.hp1
others(8): Show 
HG00140.hp1
HG00621.hp1
HG02145.hp1
HG02145.hp2
HG02622.hp1
HG02717.hp2
HG02809.hp1
HG02886.hp2
HG03579.hp1
HG03669.hp1
NA19043.hp2
 intron_variant MODIFIER c.1294+4122_1294+412
others(11): Show 
c.1294+4122_1294+4128delGAAAGAA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 INFO_REALIGN_3_PRIME chr1 84560098
chr1:84560098 AAAGAAAG
others(4): Show 
AAAGAAAGAAAG
 A
A
 3 a0002c0002t0002g0117
a0002c0002t0002g0121
a0003c0004t0001g0080
a0002c0002t0002g0117
a0002c0002t0002g0121
a0003c0004t0001g0080
 3 HG02965.hp1
NA18967.hp2
NA19079.hp1
HG02965.hp1
NA18967.hp2
NA19079.hp1
 intron_variant MODIFIER c.1294+4122_1294+413
others(15): Show 
c.1294+4122_1294+4132delGAAAGAAAGAA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 INFO_REALIGN_3_PRIME chr1 84560098
chr1:84560098 AAAGAAAG
others(8): Show 
AAAGAAAGAAAGAAAG
 A
A
 1 a0001c0003t0003g0110
a0001c0003t0003g0110
 1 NA20300.hp2
NA20300.hp2
 intron_variant MODIFIER c.1294+4122_1294+413
others(19): Show 
c.1294+4122_1294+4136delGAAAGAAAGAAAGAA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 INFO_REALIGN_3_PRIME chr1 84560098
chr1:84560099 AAGAAAGA
others(3): Show 
AAGAAAGAAAG
 A
A
 14 a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
others(11): Show 
a0001c0003t0001g0075
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0076
a0003c0004t0001g0079
a0003c0004t0001g0081
a0006c0007t0001g0035
 16 HG00639.hp2
HG00741.hp2
HG01168.hp2
others(13): Show 
HG00639.hp2
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01975.hp1
HG02698.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02970.hp1
HG03209.hp1
HG03540.hp1
HG06807.hp1
NA20805.hp1
 intron_variant MODIFIER c.1294+4122_1294+413
others(14): Show 
c.1294+4122_1294+4131delGAAAGAAAGA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 INFO_REALIGN_3_PRIME chr1 84560099
chr1:84560099 AAGAAAGA
others(15): Show 
AAGAAAGAAAGAAAGAAAGAAAG
 A
A
 1 a0003c0004t0001g0064
a0003c0004t0001g0064
 1 HG04199.hp1
HG04199.hp1
 intron_variant MODIFIER c.1294+4122_1294+414
others(26): Show 
c.1294+4122_1294+4143delGAAAGAAAGAAAGAAAGAAAGA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 INFO_REALIGN_3_PRIME chr1 84560099
chr1:84560100 AGAAAG
AGAAAG
 A
A
 4 a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
others(1): Show 
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
 5 HG02723.hp2
HG02809.hp2
HG03130.hp1
others(2): Show 
HG02723.hp2
HG02809.hp2
HG03130.hp1
NA19043.hp1
NA19240.hp2
 intron_variant MODIFIER c.1294+4122_1294+412
others(9): Show 
c.1294+4122_1294+4126delGAAAG
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84560100
chr1:84560100 AGAAAGAA
others(2): Show 
AGAAAGAAAG
 A
A
 4 a0003c0004t0001g0070
a0003c0004t0001g0074
a0003c0004t0001g0077
others(1): Show 
a0003c0004t0001g0070
a0003c0004t0001g0074
a0003c0004t0001g0077
a0003c0004t0001g0078
 4 HG01891.hp1
HG03516.hp2
HG04184.hp1
others(1): Show 
HG01891.hp1
HG03516.hp2
HG04184.hp1
NA21309.hp1
 intron_variant MODIFIER c.1294+4122_1294+413
others(13): Show 
c.1294+4122_1294+4130delGAAAGAAAG
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84560100
chr1:84560108 AGAAAGAA
others(18): Show 
AGAAAGAAAGAAAGAAAGAAAGAAAG
 A
A
 1 a0001c0001t0001g0186
a0001c0001t0001g0186
 1 HG02717.hp1
HG02717.hp1
 intron_variant MODIFIER c.1294+4148_1294+417
others(29): Show 
c.1294+4148_1294+4172delAAGAAAGGAAAGAAAGAAAGAAAGA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 INFO_REALIGN_3_PRIME chr1 84560108
chr1:84560125 GAAAGAAA
others(5): Show 
GAAAGAAAGGAAA
 G
G
 1 a0001c0003t0004g0051
a0001c0003t0004g0051
 1 NA19058.hp2
NA19058.hp2
 intron_variant MODIFIER c.1294+4147_1294+415
others(16): Show 
c.1294+4147_1294+4158delAAAGAAAGGAAA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84560125
chr1:84560246 T
T
 C
C
 1 a0003c0004t0001g0071
a0003c0004t0001g0071
 1 NA20805.hp1
NA20805.hp1
 intron_variant MODIFIER c.1294+4267T>C
c.1294+4267T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84560246
chr1:84560262 T
T
 C
C
 27 a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
others(24): Show 
a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0007g0106
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0006c0007t0001g0035
 30 HG00639.hp2
HG00741.hp2
HG01168.hp2
others(27): Show 
HG00639.hp2
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02109.hp1
HG02698.hp1
HG02723.hp2
HG02809.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03130.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18988.hp2
NA19043.hp1
NA19063.hp1
NA19240.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.1294+4283T>C
c.1294+4283T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84560262
chr1:84560534 G
G
 A
A
 2 a0002c0002t0007g0106
a0006c0007t0001g0035
a0002c0002t0007g0106
a0006c0007t0001g0035
 2 HG00639.hp2
HG02109.hp1
HG00639.hp2
HG02109.hp1
 intron_variant MODIFIER c.1294+4555G>A
c.1294+4555G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84560534
chr1:84560573 C
C
 T
T
 27 a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
others(24): Show 
a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0007g0106
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0006c0007t0001g0035
 30 HG00639.hp2
HG00741.hp2
HG01168.hp2
others(27): Show 
HG00639.hp2
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02109.hp1
HG02698.hp1
HG02723.hp2
HG02809.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03130.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18988.hp2
NA19043.hp1
NA19063.hp1
NA19240.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.1294+4594C>T
c.1294+4594C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84560573
chr1:84560596 T
T
 C
C
 1 a0001c0001t0001g0202
a0001c0001t0001g0202
 1 NA18951.hp1
NA18951.hp1
 intron_variant MODIFIER c.1294+4617T>C
c.1294+4617T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84560596
chr1:84560908 T
T
 C
C
 4 a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
others(1): Show 
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0003c0004t0006g0068
 6 HG02258.hp1
HG02630.hp2
HG02818.hp2
others(3): Show 
HG02258.hp1
HG02630.hp2
HG02818.hp2
HG02895.hp1
HG02965.hp2
HG03225.hp1
 intron_variant MODIFIER c.1294+4929T>C
c.1294+4929T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84560908
chr1:84560948 G
G
 A
A
 2 a0002c0002t0007g0106
a0006c0007t0001g0035
a0002c0002t0007g0106
a0006c0007t0001g0035
 2 HG00639.hp2
HG02109.hp1
HG00639.hp2
HG02109.hp1
 intron_variant MODIFIER c.1295-4913G>A
c.1295-4913G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84560948
chr1:84561160 T
T
 G
G
 116 a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
others(113): Show 
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
 139 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(136): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00673.hp1
HG00735.hp1
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01169.hp1
HG01192.hp2
HG01346.hp1
HG01891.hp2
HG01943.hp1
HG01993.hp1
HG02015.hp1
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp2
HG02155.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02717.hp2
HG02723.hp1
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02922.hp1
HG02965.hp2
HG02976.hp1
HG02976.hp2
HG03041.hp1
HG03041.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04199.hp2
HG04204.hp1
HG04228.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18944.hp1
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18968.hp1
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19004.hp2
NA19012.hp1
NA19030.hp1
NA19043.hp2
NA19054.hp1
NA19056.hp2
NA19057.hp2
NA19058.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19090.hp1
NA19091.hp1
NA19240.hp1
NA20300.hp2
NA21309.hp2
 intron_variant MODIFIER c.1295-4701T>G
c.1295-4701T>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84561160
chr1:84561215 A
A
 T
T
 1 a0004c0005t0001g0034
a0004c0005t0001g0034
 1 HG02451.hp2
HG02451.hp2
 intron_variant MODIFIER c.1295-4646A>T
c.1295-4646A>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84561215
chr1:84561407 G
G
 A
A
 4 a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
others(1): Show 
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
 5 HG02723.hp2
HG02809.hp2
HG03130.hp1
others(2): Show 
HG02723.hp2
HG02809.hp2
HG03130.hp1
NA19043.hp1
NA19240.hp2
 intron_variant MODIFIER c.1295-4454G>A
c.1295-4454G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84561407
chr1:84561418 A
A
 G
G
 1 a0002c0002t0002g0085
a0002c0002t0002g0085
 1 HG00438.hp1
HG00438.hp1
 intron_variant MODIFIER c.1295-4443A>G
c.1295-4443A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84561418
chr1:84561442 C
C
 T
T
 35 a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
others(32): Show 
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0128
a0002c0002t0007g0100
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
 41 HG00408.hp1
HG00438.hp1
HG00544.hp1
others(38): Show 
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00673.hp1
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02132.hp2
HG02155.hp1
HG04199.hp2
HG04204.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA19012.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19091.hp1
 intron_variant MODIFIER c.1295-4419C>T
c.1295-4419C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84561442
chr1:84561577 G
G
 A
A
 18 a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
others(15): Show 
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
 25 HG01891.hp2
HG02055.hp1
HG02257.hp2
others(22): Show 
HG01891.hp2
HG02055.hp1
HG02257.hp2
HG02258.hp1
HG02451.hp2
HG02486.hp1
HG02622.hp2
HG02630.hp2
HG02647.hp1
HG02723.hp1
HG02818.hp1
HG02818.hp2
HG02895.hp1
HG02922.hp1
HG02965.hp2
HG02976.hp1
HG03041.hp2
HG03195.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03486.hp1
HG06807.hp2
NA18522.hp2
NA19240.hp1
 intron_variant MODIFIER c.1295-4284G>A
c.1295-4284G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84561577
chr1:84561637 G
G
 A
A
 6 a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
others(3): Show 
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
 6 HG01109.hp1
HG01261.hp1
HG01515.hp2
others(3): Show 
HG01109.hp1
HG01261.hp1
HG01515.hp2
HG01517.hp1
HG02040.hp2
HG03017.hp2
 intron_variant MODIFIER c.1295-4224G>A
c.1295-4224G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84561637
chr1:84561769 T
T
 G
G
 5 a0002c0002t0003g0021
a0002c0002t0003g0137
a0002c0002t0003g0138
others(2): Show 
a0002c0002t0003g0021
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0141
a0002c0002t0003g0142
 6 HG00609.hp1
HG00621.hp2
NA18980.hp1
others(3): Show 
HG00609.hp1
HG00621.hp2
NA18980.hp1
NA18994.hp1
NA19077.hp1
NA19090.hp1
 intron_variant MODIFIER c.1295-4092T>G
c.1295-4092T>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84561769
chr1:84562102 T
T
 A
A
 116 a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
others(113): Show 
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
 139 HG00140.hp1
HG00280.hp1
HG00408.hp1
others(136): Show 
HG00140.hp1
HG00280.hp1
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00597.hp2
HG00609.hp1
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00673.hp1
HG00735.hp1
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01106.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01169.hp1
HG01192.hp2
HG01346.hp1
HG01891.hp2
HG01943.hp1
HG01993.hp1
HG02015.hp1
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02083.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp2
HG02155.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02293.hp2
HG02300.hp1
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02717.hp2
HG02723.hp1
HG02735.hp2
HG02738.hp1
HG02809.hp1
HG02818.hp1
HG02818.hp2
HG02886.hp2
HG02895.hp1
HG02922.hp1
HG02965.hp2
HG02976.hp1
HG02976.hp2
HG03041.hp1
HG03041.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG03834.hp1
HG04115.hp2
HG04199.hp2
HG04204.hp1
HG04228.hp1
HG06807.hp2
NA18522.hp2
NA18612.hp2
NA18747.hp2
NA18940.hp2
NA18942.hp1
NA18944.hp1
NA18945.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18968.hp1
NA18979.hp2
NA18980.hp1
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18989.hp2
NA18990.hp1
NA18992.hp1
NA18994.hp1
NA19004.hp2
NA19012.hp1
NA19030.hp1
NA19043.hp2
NA19054.hp1
NA19056.hp2
NA19057.hp2
NA19058.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19077.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19089.hp2
NA19090.hp1
NA19091.hp1
NA19240.hp1
NA20300.hp2
NA21309.hp2
 intron_variant MODIFIER c.1295-3759T>A
c.1295-3759T>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84562102
chr1:84562123 T
T
 G
G
 1 a0004c0005t0001g0029
a0004c0005t0001g0029
 1 HG06807.hp2
HG06807.hp2
 intron_variant MODIFIER c.1295-3738T>G
c.1295-3738T>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84562123
chr1:84562184 G
G
 A
A
 1 a0001c0006t0008g0087
a0001c0006t0008g0087
 1 HG03130.hp1
HG03130.hp1
 intron_variant MODIFIER c.1295-3677G>A
c.1295-3677G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84562184
chr1:84562307 T
T
 C
C
 27 a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
others(24): Show 
a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0007g0106
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0006c0007t0001g0035
 30 HG00639.hp2
HG00741.hp2
HG01168.hp2
others(27): Show 
HG00639.hp2
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02109.hp1
HG02698.hp1
HG02723.hp2
HG02809.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03130.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG06807.hp1
NA18988.hp2
NA19043.hp1
NA19063.hp1
NA19240.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.1295-3554T>C
c.1295-3554T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84562307
chr1:84562558 A
A
 G
G
 1 a0002c0002t0003g0136
a0002c0002t0003g0136
 1 HG00735.hp1
HG00735.hp1
 intron_variant MODIFIER c.1295-3303A>G
c.1295-3303A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84562558
chr1:84562591 T
T
 G
G
 54 a0001c0003t0001g0075
a0002c0002t0002g0006
a0002c0002t0002g0007
others(51): Show 
a0001c0003t0001g0075
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0128
a0002c0002t0007g0100
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
 62 HG00408.hp1
HG00438.hp1
HG00544.hp1
others(59): Show 
HG00408.hp1
HG00438.hp1
HG00544.hp1
HG00673.hp1
HG00741.hp2
HG01168.hp2
HG01169.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02132.hp2
HG02155.hp1
HG02698.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG06807.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18952.hp1
NA18954.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18962.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18983.hp1
NA18986.hp2
NA18987.hp1
NA18990.hp1
NA18992.hp1
NA19012.hp1
NA19056.hp2
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19091.hp1
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.1295-3270T>G
c.1295-3270T>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84562591
chr1:84562638 CTG
CTG
 C
C
 4 a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
others(1): Show 
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0003c0004t0006g0068
 6 HG02258.hp1
HG02630.hp2
HG02818.hp2
others(3): Show 
HG02258.hp1
HG02630.hp2
HG02818.hp2
HG02895.hp1
HG02965.hp2
HG03225.hp1
 intron_variant MODIFIER c.1295-3221_1295-322
others(6): Show 
c.1295-3221_1295-3220delGT
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 INFO_REALIGN_3_PRIME chr1 84562638
chr1:84563286 C
C
 A
A
 4 a0001c0001t0001g0266
a0001c0001t0001g0267
a0001c0001t0001g0268
others(1): Show 
a0001c0001t0001g0266
a0001c0001t0001g0267
a0001c0001t0001g0268
a0001c0001t0001g0269
 4 HG00609.hp2
NA18975.hp1
NA19065.hp1
others(1): Show 
HG00609.hp2
NA18975.hp1
NA19065.hp1
NA19066.hp2
 intron_variant MODIFIER c.1295-2575C>A
c.1295-2575C>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84563286
chr1:84563394 C
C
 T
T
 28 a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
others(25): Show 
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0263
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0012g0082
a0003c0004t0006g0068
a0005c0009t0012g0083
 30 HG00280.hp1
HG00609.hp1
HG00621.hp2
others(27): Show 
HG00280.hp1
HG00609.hp1
HG00621.hp2
HG00735.hp1
HG01106.hp1
HG01109.hp2
HG01168.hp1
HG02300.hp1
HG02451.hp1
HG02630.hp1
HG02735.hp2
HG02738.hp1
HG02818.hp2
HG02886.hp2
HG02976.hp2
HG03139.hp1
HG03471.hp1
HG03491.hp1
HG03492.hp1
HG03516.hp1
HG03579.hp2
HG03669.hp1
HG03710.hp2
HG04115.hp2
HG04228.hp1
NA18980.hp1
NA18994.hp1
NA19077.hp1
NA19090.hp1
NA21309.hp2
 intron_variant MODIFIER c.1295-2467C>T
c.1295-2467C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84563394
chr1:84563548 TA
TA
 T
T
 9 a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
others(6): Show 
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
 12 HG01070.hp1
HG01071.hp1
HG01081.hp1
others(9): Show 
HG01070.hp1
HG01071.hp1
HG01081.hp1
HG01099.hp1
HG01167.hp1
HG01169.hp1
HG02145.hp2
HG02258.hp2
HG02280.hp1
HG02572.hp1
HG03041.hp1
NA19030.hp1
 intron_variant MODIFIER c.1295-2309delA
c.1295-2309delA
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 INFO_REALIGN_3_PRIME chr1 84563548
chr1:84563806 T
T
 A
A
 1 a0001c0001t0001g0258
a0001c0001t0001g0258
 1 HG00738.hp1
HG00738.hp1
 intron_variant MODIFIER c.1295-2055T>A
c.1295-2055T>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84563806
chr1:84563964 A
A
 G
G
 1 a0002c0002t0003g0104
a0002c0002t0003g0104
 1 HG03139.hp1
HG03139.hp1
 intron_variant MODIFIER c.1295-1897A>G
c.1295-1897A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84563964
chr1:84564052 A
A
 G
G
 1 a0001c0003t0004g0057
a0001c0003t0004g0057
 1 HG02622.hp1
HG02622.hp1
 intron_variant MODIFIER c.1295-1809A>G
c.1295-1809A>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84564052
chr1:84564062 T
T
 C
C
 8 a0001c0003t0001g0075
a0003c0004t0001g0015
a0003c0004t0001g0064
others(5): Show 
a0001c0003t0001g0075
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
 9 HG01891.hp1
HG02895.hp2
HG02897.hp2
others(6): Show 
HG01891.hp1
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03516.hp2
HG03540.hp1
HG04199.hp1
 intron_variant MODIFIER c.1295-1799T>C
c.1295-1799T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84564062
chr1:84564237 T
T
 G
G
 4 a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
others(1): Show 
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
 5 HG02723.hp2
HG02809.hp2
HG03130.hp1
others(2): Show 
HG02723.hp2
HG02809.hp2
HG03130.hp1
NA19043.hp1
NA19240.hp2
 intron_variant MODIFIER c.1295-1624T>G
c.1295-1624T>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84564237
chr1:84564280 A
A
 C
C
 6 a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
others(3): Show 
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
 6 HG01109.hp1
HG01261.hp1
HG01515.hp2
others(3): Show 
HG01109.hp1
HG01261.hp1
HG01515.hp2
HG01517.hp1
HG02040.hp2
HG03017.hp2
 intron_variant MODIFIER c.1295-1581A>C
c.1295-1581A>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84564280
chr1:84564370 C
C
 T
T
 54 a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
others(51): Show 
a0001c0003t0001g0075
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0007g0106
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0006c0007t0001g0035
 62 HG00438.hp1
HG00544.hp1
HG00639.hp2
others(59): Show 
HG00438.hp1
HG00544.hp1
HG00639.hp2
HG00673.hp1
HG00741.hp2
HG01361.hp2
HG01496.hp2
HG01891.hp1
HG01975.hp1
HG02015.hp1
HG02080.hp1
HG02083.hp1
HG02109.hp1
HG02132.hp2
HG02155.hp1
HG02698.hp1
HG02723.hp2
HG02809.hp2
HG02895.hp2
HG02897.hp2
HG02922.hp2
HG02965.hp1
HG02970.hp1
HG03130.hp1
HG03209.hp1
HG03516.hp2
HG03540.hp1
HG04184.hp1
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG06807.hp1
NA18747.hp2
NA18944.hp1
NA18946.hp2
NA18948.hp1
NA18950.hp1
NA18951.hp2
NA18955.hp1
NA18957.hp1
NA18961.hp1
NA18965.hp1
NA18967.hp2
NA18979.hp2
NA18983.hp1
NA18987.hp1
NA18988.hp2
NA18990.hp1
NA18992.hp1
NA19012.hp1
NA19043.hp1
NA19063.hp1
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19079.hp1
NA19083.hp2
NA19084.hp1
NA19091.hp1
NA19240.hp2
NA20805.hp1
NA21309.hp1
 intron_variant MODIFIER c.1295-1491C>T
c.1295-1491C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84564370
chr1:84564676 G
G
 T
T
 265 a0001c0001t0001g0001
a0001c0001t0001g0003
a0001c0001t0001g0008
others(262): Show 
a0001c0001t0001g0001
a0001c0001t0001g0003
a0001c0001t0001g0008
a0001c0001t0001g0009
a0001c0001t0001g0025
a0001c0001t0001g0026
a0001c0001t0001g0060
a0001c0001t0001g0156
a0001c0001t0001g0157
a0001c0001t0001g0158
a0001c0001t0001g0159
a0001c0001t0001g0160
a0001c0001t0001g0161
a0001c0001t0001g0162
a0001c0001t0001g0163
a0001c0001t0001g0164
a0001c0001t0001g0166
a0001c0001t0001g0167
a0001c0001t0001g0168
a0001c0001t0001g0169
a0001c0001t0001g0170
a0001c0001t0001g0171
a0001c0001t0001g0172
a0001c0001t0001g0173
a0001c0001t0001g0174
a0001c0001t0001g0175
a0001c0001t0001g0176
a0001c0001t0001g0177
a0001c0001t0001g0178
a0001c0001t0001g0179
a0001c0001t0001g0180
a0001c0001t0001g0181
a0001c0001t0001g0182
a0001c0001t0001g0183
a0001c0001t0001g0184
a0001c0001t0001g0185
a0001c0001t0001g0186
a0001c0001t0001g0187
a0001c0001t0001g0188
a0001c0001t0001g0189
a0001c0001t0001g0190
a0001c0001t0001g0191
a0001c0001t0001g0192
a0001c0001t0001g0193
a0001c0001t0001g0194
a0001c0001t0001g0195
a0001c0001t0001g0196
a0001c0001t0001g0197
a0001c0001t0001g0198
a0001c0001t0001g0199
a0001c0001t0001g0200
a0001c0001t0001g0201
a0001c0001t0001g0202
a0001c0001t0001g0203
a0001c0001t0001g0204
a0001c0001t0001g0205
a0001c0001t0001g0206
a0001c0001t0001g0207
a0001c0001t0001g0208
a0001c0001t0001g0209
a0001c0001t0001g0210
a0001c0001t0001g0211
a0001c0001t0001g0212
a0001c0001t0001g0213
a0001c0001t0001g0214
a0001c0001t0001g0215
a0001c0001t0001g0216
a0001c0001t0001g0217
a0001c0001t0001g0218
a0001c0001t0001g0219
a0001c0001t0001g0220
a0001c0001t0001g0221
a0001c0001t0001g0222
a0001c0001t0001g0223
a0001c0001t0001g0224
a0001c0001t0001g0225
a0001c0001t0001g0226
a0001c0001t0001g0227
a0001c0001t0001g0228
a0001c0001t0001g0230
a0001c0001t0001g0231
a0001c0001t0001g0232
a0001c0001t0001g0233
a0001c0001t0001g0234
a0001c0001t0001g0235
a0001c0001t0001g0236
a0001c0001t0001g0237
a0001c0001t0001g0238
a0001c0001t0001g0239
a0001c0001t0001g0240
a0001c0001t0001g0241
a0001c0001t0001g0243
a0001c0001t0001g0244
a0001c0001t0001g0245
a0001c0001t0001g0246
a0001c0001t0001g0247
a0001c0001t0001g0248
a0001c0001t0001g0249
a0001c0001t0001g0250
a0001c0001t0001g0251
a0001c0001t0001g0252
a0001c0001t0001g0256
a0001c0001t0001g0257
a0001c0001t0001g0258
a0001c0001t0001g0259
a0001c0001t0001g0264
a0001c0001t0001g0265
a0001c0001t0001g0266
a0001c0001t0001g0267
a0001c0001t0001g0268
a0001c0001t0001g0269
a0001c0001t0007g0017
a0001c0001t0007g0127
a0001c0001t0009g0229
a0001c0001t0013g0165
a0001c0003t0001g0075
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0001c0003t0006g0004
a0001c0003t0006g0027
a0001c0003t0006g0028
a0001c0003t0009g0013
a0001c0003t0011g0260
a0001c0003t0011g0261
a0001c0006t0008g0016
a0001c0006t0008g0086
a0001c0006t0008g0087
a0001c0006t0014g0061
a0002c0002t0002g0006
a0002c0002t0002g0007
a0002c0002t0002g0018
a0002c0002t0002g0019
a0002c0002t0002g0085
a0002c0002t0002g0094
a0002c0002t0002g0099
a0002c0002t0002g0101
a0002c0002t0002g0111
a0002c0002t0002g0112
a0002c0002t0002g0113
a0002c0002t0002g0114
a0002c0002t0002g0115
a0002c0002t0002g0116
a0002c0002t0002g0117
a0002c0002t0002g0118
a0002c0002t0002g0119
a0002c0002t0002g0120
a0002c0002t0002g0121
a0002c0002t0002g0122
a0002c0002t0002g0123
a0002c0002t0002g0124
a0002c0002t0002g0125
a0002c0002t0002g0126
a0002c0002t0002g0134
a0002c0002t0002g0135
a0002c0002t0002g0144
a0002c0002t0002g0145
a0002c0002t0003g0020
a0002c0002t0003g0021
a0002c0002t0003g0096
a0002c0002t0003g0097
a0002c0002t0003g0098
a0002c0002t0003g0103
a0002c0002t0003g0104
a0002c0002t0003g0107
a0002c0002t0003g0108
a0002c0002t0003g0109
a0002c0002t0003g0128
a0002c0002t0003g0132
a0002c0002t0003g0133
a0002c0002t0003g0136
a0002c0002t0003g0137
a0002c0002t0003g0138
a0002c0002t0003g0139
a0002c0002t0003g0140
a0002c0002t0003g0141
a0002c0002t0003g0142
a0002c0002t0003g0143
a0002c0002t0003g0146
a0002c0002t0003g0149
a0002c0002t0003g0262
a0002c0002t0003g0263
a0002c0002t0005g0022
a0002c0002t0005g0023
a0002c0002t0005g0024
a0002c0002t0005g0150
a0002c0002t0005g0151
a0002c0002t0005g0152
a0002c0002t0005g0153
a0002c0002t0005g0154
a0002c0002t0005g0155
a0002c0002t0006g0062
a0002c0002t0006g0063
a0002c0002t0006g0084
a0002c0002t0007g0100
a0002c0002t0007g0106
a0002c0002t0007g0129
a0002c0002t0007g0130
a0002c0002t0007g0131
a0002c0002t0010g0147
a0002c0002t0010g0148
a0002c0002t0012g0082
a0003c0004t0001g0014
a0003c0004t0001g0015
a0003c0004t0001g0064
a0003c0004t0001g0065
a0003c0004t0001g0066
a0003c0004t0001g0067
a0003c0004t0001g0069
a0003c0004t0001g0070
a0003c0004t0001g0071
a0003c0004t0001g0072
a0003c0004t0001g0073
a0003c0004t0001g0074
a0003c0004t0001g0076
a0003c0004t0001g0077
a0003c0004t0001g0078
a0003c0004t0001g0079
a0003c0004t0001g0080
a0003c0004t0001g0081
a0003c0004t0006g0068
a0004c0005t0001g0005
a0004c0005t0001g0010
a0004c0005t0001g0011
a0004c0005t0001g0012
a0004c0005t0001g0029
a0004c0005t0001g0030
a0004c0005t0001g0031
a0004c0005t0001g0032
a0004c0005t0001g0033
a0004c0005t0001g0034
a0004c0005t0001g0036
a0004c0005t0001g0037
a0004c0005t0001g0038
a0004c0005t0001g0039
a0005c0009t0012g0083
a0006c0007t0001g0035
a0007c0008t0001g0242
 308 HG00140.hp1
HG00140.hp2
HG00280.hp1
others(305): Show 
HG00140.hp1
HG00140.hp2
HG00280.hp1
HG00280.hp2
HG00408.hp1
HG00408.hp2
HG00438.hp1
HG00438.hp2
HG00544.hp1
HG00544.hp2
HG00597.hp1
HG00597.hp2
HG00609.hp1
HG00609.hp2
HG00621.hp1
HG00621.hp2
HG00639.hp1
HG00639.hp2
HG00642.hp1
HG00642.hp2
HG00673.hp1
HG00673.hp2
HG00735.hp1
HG00735.hp2
HG00738.hp1
HG00738.hp2
HG00741.hp1
HG00741.hp2
HG01070.hp1
HG01070.hp2
HG01071.hp1
HG01071.hp2
HG01081.hp1
HG01081.hp2
HG01099.hp1
HG01099.hp2
HG01106.hp1
HG01106.hp2
HG01109.hp1
HG01109.hp2
HG01167.hp1
HG01168.hp1
HG01168.hp2
HG01169.hp1
HG01169.hp2
HG01175.hp1
HG01175.hp2
HG01192.hp1
HG01192.hp2
HG01255.hp1
HG01255.hp2
HG01261.hp1
HG01261.hp2
HG01346.hp1
HG01346.hp2
HG01361.hp1
HG01361.hp2
HG01496.hp1
HG01496.hp2
HG01515.hp1
HG01515.hp2
HG01517.hp1
HG01517.hp2
HG01891.hp1
HG01891.hp2
HG01943.hp1
HG01943.hp2
HG01975.hp1
HG01975.hp2
HG01993.hp1
HG01993.hp2
HG02015.hp1
HG02015.hp2
HG02040.hp1
HG02040.hp2
HG02055.hp1
HG02055.hp2
HG02080.hp1
HG02080.hp2
HG02083.hp1
HG02083.hp2
HG02109.hp1
HG02109.hp2
HG02132.hp1
HG02132.hp2
HG02145.hp1
HG02145.hp2
HG02148.hp1
HG02148.hp2
HG02155.hp1
HG02155.hp2
HG02257.hp1
HG02257.hp2
HG02258.hp1
HG02258.hp2
HG02280.hp1
HG02280.hp2
HG02293.hp1
HG02293.hp2
HG02300.hp1
HG02300.hp2
HG02451.hp1
HG02451.hp2
HG02486.hp1
HG02486.hp2
HG02572.hp1
HG02572.hp2
HG02622.hp1
HG02622.hp2
HG02630.hp1
HG02630.hp2
HG02647.hp1
HG02647.hp2
HG02698.hp1
HG02698.hp2
HG02717.hp1
HG02717.hp2
HG02723.hp1
HG02723.hp2
HG02735.hp1
HG02735.hp2
HG02738.hp1
HG02738.hp2
HG02809.hp1
HG02809.hp2
HG02818.hp1
HG02818.hp2
HG02886.hp1
HG02886.hp2
HG02895.hp1
HG02895.hp2
HG02897.hp1
HG02897.hp2
HG02922.hp1
HG02922.hp2
HG02965.hp1
HG02965.hp2
HG02970.hp1
HG02970.hp2
HG02976.hp1
HG02976.hp2
HG03017.hp1
HG03017.hp2
HG03041.hp1
HG03041.hp2
HG03130.hp1
HG03130.hp2
HG03139.hp1
HG03195.hp1
HG03195.hp2
HG03209.hp1
HG03209.hp2
HG03225.hp1
HG03225.hp2
HG03453.hp1
HG03453.hp2
HG03471.hp1
HG03486.hp1
HG03486.hp2
HG03491.hp1
HG03491.hp2
HG03492.hp1
HG03492.hp2
HG03516.hp1
HG03516.hp2
HG03540.hp1
HG03540.hp2
HG03579.hp1
HG03579.hp2
HG03669.hp1
HG03669.hp2
HG03710.hp1
HG03710.hp2
HG03834.hp1
HG03834.hp2
HG04115.hp1
HG04115.hp2
HG04184.hp1
HG04184.hp2
HG04199.hp1
HG04199.hp2
HG04204.hp1
HG04204.hp2
HG04228.hp1
HG04228.hp2
HG06807.hp1
HG06807.hp2
NA18522.hp1
NA18522.hp2
NA18612.hp1
NA18612.hp2
NA18747.hp1
NA18747.hp2
NA18940.hp1
NA18940.hp2
NA18942.hp1
NA18942.hp2
NA18944.hp1
NA18944.hp2
NA18945.hp1
NA18945.hp2
NA18946.hp1
NA18946.hp2
NA18948.hp1
NA18948.hp2
NA18950.hp1
NA18950.hp2
NA18951.hp1
NA18951.hp2
NA18952.hp1
NA18952.hp2
NA18954.hp1
NA18954.hp2
NA18955.hp1
NA18955.hp2
NA18957.hp1
NA18957.hp2
NA18961.hp1
NA18961.hp2
NA18962.hp1
NA18962.hp2
NA18965.hp1
NA18965.hp2
NA18967.hp1
NA18967.hp2
NA18968.hp1
NA18968.hp2
NA18969.hp1
NA18969.hp2
NA18971.hp1
NA18971.hp2
NA18975.hp1
NA18975.hp2
NA18979.hp1
NA18979.hp2
NA18980.hp1
NA18980.hp2
NA18983.hp1
NA18983.hp2
NA18986.hp1
NA18986.hp2
NA18987.hp1
NA18987.hp2
NA18988.hp1
NA18988.hp2
NA18989.hp1
NA18989.hp2
NA18990.hp1
NA18990.hp2
NA18992.hp1
NA18992.hp2
NA18994.hp1
NA18994.hp2
NA19004.hp1
NA19004.hp2
NA19007.hp1
NA19007.hp2
NA19012.hp1
NA19012.hp2
NA19030.hp1
NA19030.hp2
NA19043.hp1
NA19043.hp2
NA19054.hp1
NA19054.hp2
NA19056.hp1
NA19056.hp2
NA19057.hp1
NA19057.hp2
NA19058.hp1
NA19058.hp2
NA19063.hp1
NA19063.hp2
NA19065.hp1
NA19065.hp2
NA19066.hp1
NA19066.hp2
NA19068.hp1
NA19068.hp2
NA19072.hp1
NA19072.hp2
NA19074.hp1
NA19074.hp2
NA19075.hp1
NA19075.hp2
NA19077.hp1
NA19077.hp2
NA19079.hp1
NA19079.hp2
NA19083.hp1
NA19083.hp2
NA19084.hp1
NA19084.hp2
NA19089.hp1
NA19089.hp2
NA19090.hp1
NA19090.hp2
NA19091.hp1
NA19091.hp2
NA19240.hp1
NA19240.hp2
NA20300.hp1
NA20300.hp2
NA20805.hp1
NA20805.hp2
NA21309.hp1
NA21309.hp2
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.1295-1185G>T
c.1295-1185G>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84564676
chr1:84564781 C
C
 T
T
 1 a0001c0003t0003g0102
a0001c0003t0003g0102
 1 HG03195.hp2
HG03195.hp2
 intron_variant MODIFIER c.1295-1080C>T
c.1295-1080C>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84564781
chr1:84565143 G
G
 A
A
 7 a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0055
others(4): Show 
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
 7 HG02145.hp1
HG02572.hp2
HG02622.hp1
others(4): Show 
HG02145.hp1
HG02572.hp2
HG02622.hp1
HG02717.hp2
HG02809.hp1
NA19043.hp2
NA20300.hp2
 intron_variant MODIFIER c.1295-718G>A
c.1295-718G>A
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84565143
chr1:84565213 A
A
 T
T
 1 a0001c0001t0001g0213
a0001c0001t0001g0213
 1 NA19072.hp1
NA19072.hp1
 intron_variant MODIFIER c.1295-648A>T
c.1295-648A>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84565213
chr1:84565274 T
T
 C
C
 7 a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0055
others(4): Show 
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
 7 HG02145.hp1
HG02572.hp2
HG02622.hp1
others(4): Show 
HG02145.hp1
HG02572.hp2
HG02622.hp1
HG02717.hp2
HG02809.hp1
NA19043.hp2
NA20300.hp2
 intron_variant MODIFIER c.1295-587T>C
c.1295-587T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84565274
chr1:84565316 A
A
 T
T
 1 a0002c0002t0005g0150
a0002c0002t0005g0150
 1 HG01099.hp1
HG01099.hp1
 intron_variant MODIFIER c.1295-545A>T
c.1295-545A>T
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84565316
chr1:84565331 T
T
 G
G
 3 a0001c0001t0001g0256
a0001c0001t0001g0257
a0001c0001t0001g0259
a0001c0001t0001g0256
a0001c0001t0001g0257
a0001c0001t0001g0259
 3 HG00735.hp2
HG01496.hp1
homoSapiens_chm13v2.hp1
HG00735.hp2
HG01496.hp1
homoSapiens_chm13v2.hp1
 intron_variant MODIFIER c.1295-530T>G
c.1295-530T>G
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84565331
chr1:84565735 T
T
 C
C
 25 a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
others(22): Show 
a0001c0003t0003g0102
a0001c0003t0003g0105
a0001c0003t0003g0110
a0001c0003t0004g0002
a0001c0003t0004g0040
a0001c0003t0004g0041
a0001c0003t0004g0042
a0001c0003t0004g0043
a0001c0003t0004g0044
a0001c0003t0004g0045
a0001c0003t0004g0046
a0001c0003t0004g0047
a0001c0003t0004g0048
a0001c0003t0004g0049
a0001c0003t0004g0050
a0001c0003t0004g0051
a0001c0003t0004g0052
a0001c0003t0004g0053
a0001c0003t0004g0054
a0001c0003t0004g0055
a0001c0003t0004g0056
a0001c0003t0004g0057
a0001c0003t0004g0058
a0001c0003t0004g0059
a0002c0002t0003g0128
 29 HG00140.hp1
HG00408.hp1
HG00597.hp2
others(26): Show 
HG00140.hp1
HG00408.hp1
HG00597.hp2
HG00621.hp1
HG00639.hp1
HG01192.hp2
HG01346.hp1
HG01943.hp1
HG02055.hp2
HG02145.hp1
HG02148.hp2
HG02293.hp2
HG02572.hp2
HG02622.hp1
HG02717.hp2
HG02809.hp1
HG03195.hp2
HG03834.hp1
NA18612.hp2
NA18940.hp2
NA18942.hp1
NA18968.hp1
NA18989.hp2
NA19043.hp2
NA19054.hp1
NA19057.hp2
NA19058.hp2
NA19089.hp2
NA20300.hp2
 intron_variant MODIFIER c.1295-126T>C
c.1295-126T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84565735
chr1:84565809 T
T
 C
C
 6 a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
others(3): Show 
a0001c0003t0001g0088
a0001c0003t0001g0089
a0001c0003t0001g0090
a0001c0003t0001g0091
a0001c0003t0001g0092
a0001c0003t0001g0093
 6 HG01109.hp1
HG01261.hp1
HG01515.hp2
others(3): Show 
HG01109.hp1
HG01261.hp1
HG01515.hp2
HG01517.hp1
HG02040.hp2
HG03017.hp2
 intron_variant MODIFIER c.1295-52T>C
c.1295-52T>C
SPATA1 ENSG00000122432.19 transcript ENST00000699524.1 protein_coding 13/13 chr1 84565809

  • GeneCards
  • OpenTarget
  • The Human Protein Atlas
  • Gnomad v4.1.0
  • PhewebJP (Japan)
  • UKB-TOPMed (UMich) (UK and US)
  • FinnGen r11 (Finland)
  • KoGES (Korean)
  • Mouse Phenotype
  • Zebra Phenotype
  • TogoVar

  • DNA
  • Satellite
  • All Snps 1.4.2
  • RC
  • snRNA
  • SINE
  • GC %
  • Simple_repeat
  • RNA
  • Retroposon
  • Unknown
  • Low_complexity
  • LINE
  • scRNA
  • CpG Islands
  • Phastcons (20 way)
  • srpRNA
  • Common Snps 1.4.2
  • rRNA
  • LTR
  • tRNA

  • Axiom Genome-Wide Array (Japonica Array V1)
  • Axiom Genome-Wide Array (Japonica Array V2)
  • Axiom Genome-Wide ASI Array V1 (ASI V1)
​

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