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geneid	91298
ensemblid	ENSG00000133641.18
hgncid	25322
symbol	RLIG1
name	RNA 5'-phosphate and 3'-OH ligase 1
refseq_nuc	NM_001009894.3
refseq_prot	NP_001009894.2
ensembl_nuc	ENST00000356891.4
ensembl_prot	ENSP00000349358.3
mane_status	MANE Select
chr	chr12
start	88035536
end	88050160
strand	+
ver	v1.2
region	chr12:88035536-88050160
region5000	chr12:88030536-88055160
regionname0	RLIG1_chr12_88035536_88050160
regionname5000	RLIG1_chr12_88030536_88055160

ahapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	alen	total	AFR	AMR	EAS	EUR	SAS	JPT	regionname	genename	aa	chr	start	end
a0001	1/0	325	199	78	34	72	4	10	64	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
a0002	0/1	325	150	12	29	86	6	16	52	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
a0003	0/0	325	4	0	0	4	0	0	4	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
a0004	0/0	325	3	0	3	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160

chapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
c0001	1/0	978	199	78	34	72	4	10	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
c0002	0/1	978	150	12	29	86	6	16	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
c0003	0/0	978	4	0	0	4	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
c0004	0/0	978	3	0	3	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160

thapid	grch38 chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
t0001	1/1	1852	284	60	60	127	9	26	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
t0002	0/0	1852	18	0	0	18	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
t0003	0/0	1846	16	13	3	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
t0004	0/0	1848	12	1	2	9	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
t0005	0/0	1852	7	0	0	6	1	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
t0006	0/0	1852	6	6	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
t0007	0/0	1857	3	3	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
t0008	0/0	1848	2	2	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
t0009	0/0	1852	2	2	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
t0010	0/0	1848	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
t0011	0/0	1852	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
t0012	0/0	1852	1	0	1	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
t0013	0/0	1852	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
t0014	0/0	1852	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
t0015	0/0	1852	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160

ghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
g0001	0/1	178	23	33	102	5	14	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0002	0/0	30	25	2	2	0	1	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0003	0/0	20	1	5	10	1	3	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0004	0/0	13	0	5	5	1	2	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0005	0/0	12	9	3	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0006	0/0	11	0	2	9	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0007	0/0	9	0	2	7	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0008	0/0	6	0	5	0	1	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0009	0/0	4	1	1	0	2	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0010	0/0	4	0	0	4	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0011	0/0	4	4	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0012	0/0	3	3	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0013	0/0	3	0	0	3	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0014	0/0	3	0	3	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0015	0/0	3	0	3	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0016	0/0	3	3	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0017	0/0	3	0	0	3	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0018	0/0	2	0	0	1	0	1	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0019	0/0	2	2	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0020	0/0	2	0	0	2	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0021	0/0	2	2	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0022	0/0	2	0	0	1	0	1	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0023	0/0	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0024	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0025	0/0	1	0	0	0	0	1	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0026	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0027	1/0	1	0	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0028	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0029	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0030	0/0	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0031	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0032	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0033	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0034	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0035	0/0	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0036	0/0	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0037	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0038	0/0	1	0	1	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0039	0/0	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0040	0/0	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0041	0/0	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0042	0/0	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0043	0/0	1	0	0	0	0	1	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0044	0/0	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0045	0/0	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0046	0/0	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0047	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0048	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0049	0/0	1	0	0	0	0	1	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0050	0/0	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0051	0/0	1	0	0	0	0	1	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0052	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0053	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0054	0/0	1	0	1	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0055	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0056	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0057	0/0	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0058	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
g0059	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160

achapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	clen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	cseq	chr	start	end
a0001c0001	1/0	978	199	78	34	72	4	10	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
a0002c0002	0/1	978	150	12	29	86	6	16	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
a0003c0003	0/0	978	4	0	0	4	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
a0004c0004	0/0	978	3	0	3	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160

acthapid	grch38 chm13v2	tlen	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	tseq	chr	start	end
a0001c0001t0001	1/0	2829	153	48	28	62	4	10	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
a0001c0001t0003	0/0	2823	16	13	3	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
a0001c0001t0004	0/0	2825	12	1	2	9	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
a0001c0001t0006	0/0	2829	6	6	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
a0001c0001t0007	0/0	2834	3	3	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
a0001c0001t0008	0/0	2825	2	2	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
a0001c0001t0009	0/0	2829	2	2	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
a0001c0001t0010	0/0	2825	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
a0001c0001t0012	0/0	2829	1	0	1	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
a0001c0001t0013	0/0	2829	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
a0001c0001t0014	0/0	2829	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
a0001c0001t0015	0/0	2829	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
a0002c0002t0001	0/1	2829	124	12	29	61	5	16	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
a0002c0002t0002	0/0	2829	18	0	0	18	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
a0002c0002t0005	0/0	2829	7	0	0	6	1	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
a0002c0002t0011	0/0	2829	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
a0003c0003t0001	0/0	2829	4	0	0	4	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160
a0004c0004t0001	0/0	2829	3	0	3	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	copy fasta	chr12	88030536	88055160

actghapid	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	total	AFR	AMR	EAS	EUR	SAS	regionname	genename	chr	start	end
a0001c0001t0001g0001	0/0	61	14	16	28	0	3	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0001g0002	0/0	28	23	2	2	0	1	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0001g0003	0/0	20	1	5	10	1	3	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0001g0004	0/0	13	0	5	5	1	2	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0001g0009	0/0	2	0	0	0	2	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0001g0010	0/0	4	0	0	4	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0001g0012	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0001g0013	0/0	3	0	0	3	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0001g0016	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0001g0017	0/0	3	0	0	3	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0001g0019	0/0	2	2	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0001g0020	0/0	2	0	0	2	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0001g0024	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0001g0026	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0001g0027	1/0	1	0	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0001g0028	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0001g0029	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0001g0034	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0001g0040	0/0	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0001g0043	0/0	1	0	0	0	0	1	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0001g0044	0/0	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0001g0045	0/0	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0001g0046	0/0	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0001g0050	0/0	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0001g0058	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0003g0005	0/0	12	9	3	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0003g0031	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0003g0055	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0003g0056	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0003g0059	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0004g0006	0/0	11	0	2	9	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0004g0048	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0006g0011	0/0	4	4	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0006g0032	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0006g0033	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0007g0021	0/0	2	2	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0007g0052	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0008g0016	0/0	2	2	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0009g0012	0/0	2	2	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0010g0047	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0012g0001	0/0	1	0	1	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0013g0030	0/0	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0014g0002	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0001c0001t0015g0002	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0002c0002t0001g0001	0/1	87	9	16	46	4	11	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0002c0002t0001g0007	0/0	9	0	2	7	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0002c0002t0001g0008	0/0	6	0	5	0	1	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0002c0002t0001g0009	0/0	2	1	1	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0002c0002t0001g0015	0/0	3	0	3	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0002c0002t0001g0018	0/0	2	0	0	1	0	1	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0002c0002t0001g0022	0/0	2	0	0	1	0	1	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0002c0002t0001g0023	0/0	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0002c0002t0001g0025	0/0	1	0	0	0	0	1	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0002c0002t0001g0035	0/0	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0002c0002t0001g0037	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0002c0002t0001g0038	0/0	1	0	1	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0002c0002t0001g0039	0/0	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0002c0002t0001g0041	0/0	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0002c0002t0001g0042	0/0	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0002c0002t0001g0049	0/0	1	0	0	0	0	1	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0002c0002t0001g0051	0/0	1	0	0	0	0	1	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0002c0002t0001g0053	0/0	1	1	0	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0002c0002t0001g0054	0/0	1	0	1	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0002c0002t0001g0057	0/0	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0002c0002t0002g0001	0/0	17	0	0	17	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0002c0002t0002g0036	0/0	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0002c0002t0005g0001	0/0	7	0	0	6	1	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0002c0002t0011g0001	0/0	1	0	0	1	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0003c0003t0001g0001	0/0	4	0	0	4	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
a0004c0004t0001g0014	0/0	3	0	3	0	0	0	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160

sampleid	ID haplotypeid	ahapid	chapid	thapid	ghapid	gpopname	popname	regionname	genename	chr	start	end
HG00280	hp1	a0001	c0001	t0001	g0009	EUR	FIN	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG00280	hp2	a0002	c0002	t0001	g0001	EUR	FIN	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG00323	hp1	a0002	c0002	t0001	g0001	EUR	FIN	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG00323	hp2	a0001	c0001	t0001	g0003	EUR	FIN	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG00423	hp1	a0002	c0002	t0001	g0001	EAS	CHS	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG00423	hp2	a0001	c0001	t0001	g0003	EAS	CHS	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG00438	hp1	a0002	c0002	t0001	g0001	EAS	CHS	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG00438	hp2	a0002	c0002	t0002	g0001	EAS	CHS	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG00558	hp1	a0002	c0002	t0001	g0001	EAS	CHS	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG00558	hp2	a0002	c0002	t0001	g0007	EAS	CHS	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG00597	hp1	a0002	c0002	t0001	g0023	EAS	CHS	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG00597	hp2	a0002	c0002	t0002	g0001	EAS	CHS	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG00609	hp1	a0001	c0001	t0001	g0003	EAS	CHS	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG00609	hp2	a0002	c0002	t0001	g0001	EAS	CHS	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG00621	hp1	a0002	c0002	t0001	g0001	EAS	CHS	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG00621	hp2	a0002	c0002	t0005	g0001	EAS	CHS	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG00639	hp1	a0002	c0002	t0001	g0001	AMR	PUR	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG00639	hp2	a0001	c0001	t0001	g0001	AMR	PUR	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG00642	hp1	a0001	c0001	t0001	g0004	AMR	PUR	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG00642	hp2	a0002	c0002	t0001	g0015	AMR	PUR	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG00673	hp1	a0002	c0002	t0001	g0001	EAS	CHS	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG00673	hp2	a0002	c0002	t0001	g0007	EAS	CHS	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG00735	hp1	a0001	c0001	t0001	g0001	AMR	PUR	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG00735	hp2	a0002	c0002	t0001	g0001	AMR	PUR	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG00738	hp1	a0001	c0001	t0001	g0001	AMR	PUR	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG00738	hp2	a0001	c0001	t0001	g0003	AMR	PUR	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG00741	hp1	a0002	c0002	t0001	g0001	AMR	PUR	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG00741	hp2	a0001	c0001	t0001	g0001	AMR	PUR	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01071	hp1	a0001	c0001	t0001	g0002	AMR	PUR	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01071	hp2	a0001	c0001	t0001	g0001	AMR	PUR	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01074	hp1	a0001	c0001	t0001	g0001	AMR	PUR	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01074	hp2	a0002	c0002	t0001	g0001	AMR	PUR	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01081	hp1	a0001	c0001	t0001	g0001	AMR	PUR	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01081	hp2	a0001	c0001	t0001	g0001	AMR	PUR	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01099	hp1	a0002	c0002	t0001	g0008	AMR	PUR	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01099	hp2	a0001	c0001	t0001	g0001	AMR	PUR	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01106	hp1	a0001	c0001	t0001	g0003	AMR	PUR	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01106	hp2	a0001	c0001	t0001	g0001	AMR	PUR	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01109	hp1	a0001	c0001	t0001	g0001	AMR	PUR	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01109	hp2	a0001	c0001	t0003	g0005	AMR	PUR	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01168	hp1	a0002	c0002	t0001	g0009	AMR	PUR	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01168	hp2	a0002	c0002	t0001	g0001	AMR	PUR	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01175	hp1	a0002	c0002	t0001	g0001	AMR	PUR	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01175	hp2	a0001	c0001	t0004	g0006	AMR	PUR	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01192	hp1	a0002	c0002	t0001	g0001	AMR	PUR	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01192	hp2	a0001	c0001	t0003	g0005	AMR	PUR	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01243	hp1	a0002	c0002	t0001	g0001	AMR	PUR	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01243	hp2	a0001	c0001	t0003	g0005	AMR	PUR	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01255	hp1	a0001	c0001	t0004	g0006	AMR	CLM	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01255	hp2	a0002	c0002	t0001	g0001	AMR	CLM	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01258	hp1	a0002	c0002	t0001	g0001	AMR	CLM	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01258	hp2	a0002	c0002	t0001	g0001	AMR	CLM	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01261	hp1	a0002	c0002	t0001	g0038	AMR	CLM	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01261	hp2	a0002	c0002	t0001	g0001	AMR	CLM	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01346	hp1	a0002	c0002	t0001	g0054	AMR	CLM	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01346	hp2	a0002	c0002	t0001	g0008	AMR	CLM	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01358	hp1	a0001	c0001	t0001	g0004	AMR	CLM	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01358	hp2	a0002	c0002	t0001	g0001	AMR	CLM	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01515	hp1	a0002	c0002	t0001	g0001	EUR	IBS	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01515	hp2	a0001	c0001	t0001	g0009	EUR	IBS	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01884	hp1	a0001	c0001	t0001	g0001	AFR	ACB	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01884	hp2	a0001	c0001	t0006	g0011	AFR	ACB	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01891	hp1	a0001	c0001	t0001	g0058	AFR	ACB	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01891	hp2	a0002	c0002	t0001	g0001	AFR	ACB	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01928	hp1	a0001	c0001	t0001	g0001	AMR	PEL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01928	hp2	a0001	c0001	t0001	g0003	AMR	PEL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01934	hp1	a0002	c0002	t0001	g0007	AMR	PEL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01934	hp2	a0001	c0001	t0001	g0004	AMR	PEL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01943	hp1	a0004	c0004	t0001	g0014	AMR	PEL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01943	hp2	a0001	c0001	t0001	g0001	AMR	PEL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01952	hp1	a0002	c0002	t0001	g0015	AMR	PEL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01952	hp2	a0004	c0004	t0001	g0014	AMR	PEL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01975	hp1	a0002	c0002	t0001	g0015	AMR	PEL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01975	hp2	a0002	c0002	t0001	g0001	AMR	PEL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01978	hp1	a0001	c0001	t0001	g0001	AMR	PEL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01978	hp2	a0004	c0004	t0001	g0014	AMR	PEL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01981	hp1	a0002	c0002	t0001	g0007	AMR	PEL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01981	hp2	a0001	c0001	t0001	g0004	AMR	PEL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02004	hp1	a0001	c0001	t0001	g0003	AMR	PEL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02004	hp2	a0002	c0002	t0001	g0008	AMR	PEL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02027	hp1	a0002	c0002	t0002	g0001	EAS	KHV	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02027	hp2	a0002	c0002	t0001	g0001	EAS	KHV	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02040	hp1	a0002	c0002	t0005	g0001	EAS	KHV	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02040	hp2	a0002	c0002	t0001	g0001	EAS	KHV	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02055	hp1	a0001	c0001	t0003	g0005	AFR	ACB	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02055	hp2	a0001	c0001	t0001	g0002	AFR	ACB	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02056	hp1	a0002	c0002	t0001	g0001	EAS	KHV	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02056	hp2	a0002	c0002	t0001	g0001	EAS	KHV	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02071	hp1	a0001	c0001	t0013	g0030	EAS	KHV	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02071	hp2	a0002	c0002	t0001	g0001	EAS	KHV	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02074	hp1	a0002	c0002	t0001	g0007	EAS	KHV	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02074	hp2	a0002	c0002	t0001	g0001	EAS	KHV	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02080	hp1	a0001	c0001	t0001	g0003	EAS	KHV	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02080	hp2	a0002	c0002	t0001	g0001	EAS	KHV	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02083	hp1	a0002	c0002	t0001	g0022	EAS	KHV	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02083	hp2	a0002	c0002	t0001	g0001	EAS	KHV	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02129	hp1	a0002	c0002	t0001	g0001	EAS	KHV	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02129	hp2	a0002	c0002	t0002	g0001	EAS	KHV	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02135	hp1	a0002	c0002	t0001	g0041	EAS	KHV	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02135	hp2	a0002	c0002	t0001	g0001	EAS	KHV	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02148	hp1	a0001	c0001	t0001	g0001	AMR	PEL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02148	hp2	a0001	c0001	t0001	g0003	AMR	PEL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02155	hp1	a0001	c0001	t0004	g0006	EAS	CDX	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02155	hp2	a0002	c0002	t0001	g0001	EAS	CDX	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02165	hp1	a0002	c0002	t0001	g0042	EAS	CDX	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02165	hp2	a0002	c0002	t0001	g0001	EAS	CDX	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02257	hp1	a0001	c0001	t0001	g0028	AFR	ACB	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02257	hp2	a0001	c0001	t0007	g0052	AFR	ACB	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02258	hp1	a0001	c0001	t0001	g0002	AFR	ACB	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02258	hp2	a0001	c0001	t0003	g0005	AFR	ACB	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02273	hp1	a0002	c0002	t0001	g0001	AMR	PEL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02273	hp2	a0002	c0002	t0001	g0008	AMR	PEL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02280	hp1	a0001	c0001	t0001	g0001	AFR	ACB	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02280	hp2	a0001	c0001	t0001	g0002	AFR	ACB	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02293	hp1	a0001	c0001	t0001	g0001	AMR	PEL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02293	hp2	a0001	c0001	t0001	g0002	AMR	PEL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02300	hp1	a0002	c0002	t0001	g0008	AMR	PEL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02300	hp2	a0002	c0002	t0001	g0001	AMR	PEL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02451	hp1	a0002	c0002	t0001	g0009	AFR	ACB	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02451	hp2	a0001	c0001	t0001	g0001	AFR	ACB	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02523	hp1	a0002	c0002	t0001	g0007	EAS	KHV	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02523	hp2	a0001	c0001	t0001	g0040	EAS	KHV	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02572	hp1	a0001	c0001	t0001	g0002	AFR	GWD	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02572	hp2	a0001	c0001	t0001	g0002	AFR	GWD	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02615	hp1	a0001	c0001	t0001	g0026	AFR	GWD	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02615	hp2	a0002	c0002	t0001	g0053	AFR	GWD	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02630	hp1	a0001	c0001	t0001	g0001	AFR	GWD	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02630	hp2	a0001	c0001	t0014	g0002	AFR	GWD	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02647	hp1	a0001	c0001	t0001	g0001	AFR	GWD	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02647	hp2	a0001	c0001	t0006	g0011	AFR	GWD	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02683	hp1	a0001	c0001	t0001	g0003	SAS	PJL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02683	hp2	a0002	c0002	t0001	g0049	SAS	PJL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02717	hp1	a0002	c0002	t0001	g0001	AFR	GWD	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02717	hp2	a0001	c0001	t0001	g0002	AFR	GWD	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02723	hp1	a0001	c0001	t0001	g0002	AFR	GWD	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02723	hp2	a0001	c0001	t0001	g0001	AFR	GWD	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02735	hp1	a0001	c0001	t0001	g0001	SAS	PJL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02735	hp2	a0002	c0002	t0001	g0001	SAS	PJL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02809	hp1	a0001	c0001	t0001	g0002	AFR	GWD	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02809	hp2	a0002	c0002	t0001	g0001	AFR	GWD	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02818	hp1	a0002	c0002	t0001	g0001	AFR	GWD	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02818	hp2	a0001	c0001	t0001	g0002	AFR	GWD	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02886	hp1	a0002	c0002	t0001	g0001	AFR	GWD	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02886	hp2	a0001	c0001	t0010	g0047	AFR	GWD	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02895	hp1	a0001	c0001	t0001	g0002	AFR	GWD	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02895	hp2	a0001	c0001	t0006	g0011	AFR	GWD	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02896	hp1	a0001	c0001	t0001	g0019	AFR	GWD	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02896	hp2	a0001	c0001	t0003	g0005	AFR	GWD	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02897	hp1	a0001	c0001	t0001	g0019	AFR	GWD	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02897	hp2	a0001	c0001	t0001	g0002	AFR	GWD	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02922	hp1	a0001	c0001	t0001	g0001	AFR	ESN	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02922	hp2	a0001	c0001	t0001	g0002	AFR	ESN	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02970	hp1	a0002	c0002	t0001	g0001	AFR	ESN	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02970	hp2	a0001	c0001	t0003	g0005	AFR	ESN	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02976	hp1	a0002	c0002	t0001	g0001	AFR	ESN	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02976	hp2	a0001	c0001	t0001	g0002	AFR	ESN	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03041	hp1	a0001	c0001	t0001	g0029	AFR	GWD	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03041	hp2	a0001	c0001	t0007	g0021	AFR	GWD	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03098	hp1	a0001	c0001	t0001	g0016	AFR	MSL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03098	hp2	a0001	c0001	t0001	g0001	AFR	MSL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03130	hp1	a0001	c0001	t0003	g0005	AFR	ESN	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03130	hp2	a0001	c0001	t0003	g0056	AFR	ESN	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03139	hp1	a0002	c0002	t0001	g0001	AFR	ESN	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03139	hp2	a0001	c0001	t0001	g0002	AFR	ESN	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03209	hp1	a0001	c0001	t0009	g0012	AFR	MSL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03209	hp2	a0001	c0001	t0003	g0005	AFR	MSL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03225	hp1	a0001	c0001	t0006	g0011	AFR	MSL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03225	hp2	a0001	c0001	t0001	g0002	AFR	MSL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03239	hp1	a0002	c0002	t0001	g0025	SAS	PJL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03239	hp2	a0002	c0002	t0001	g0022	SAS	PJL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03453	hp1	a0001	c0001	t0006	g0032	AFR	MSL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03453	hp2	a0001	c0001	t0001	g0002	AFR	MSL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03516	hp1	a0001	c0001	t0001	g0034	AFR	ESN	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03516	hp2	a0001	c0001	t0008	g0016	AFR	ESN	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03540	hp1	a0001	c0001	t0007	g0021	AFR	GWD	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03540	hp2	a0001	c0001	t0009	g0012	AFR	GWD	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03579	hp1	a0001	c0001	t0003	g0031	AFR	MSL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03579	hp2	a0001	c0001	t0003	g0005	AFR	MSL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03654	hp1	a0002	c0002	t0001	g0001	SAS	PJL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03654	hp2	a0002	c0002	t0001	g0001	SAS	PJL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03704	hp1	a0002	c0002	t0001	g0001	SAS	PJL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03704	hp2	a0002	c0002	t0001	g0001	SAS	PJL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03710	hp1	a0001	c0001	t0001	g0003	SAS	PJL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03710	hp2	a0002	c0002	t0001	g0001	SAS	PJL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03834	hp1	a0001	c0001	t0001	g0001	SAS	BEB	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03834	hp2	a0002	c0002	t0001	g0001	SAS	BEB	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03927	hp1	a0002	c0002	t0001	g0051	SAS	BEB	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03927	hp2	a0002	c0002	t0001	g0018	SAS	BEB	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG04115	hp1	a0002	c0002	t0001	g0001	SAS	STU	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG04115	hp2	a0001	c0001	t0001	g0004	SAS	STU	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG04184	hp1	a0001	c0001	t0001	g0003	SAS	BEB	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG04184	hp2	a0001	c0001	t0001	g0001	SAS	BEB	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG04199	hp1	a0001	c0001	t0001	g0004	SAS	STU	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG04199	hp2	a0002	c0002	t0001	g0001	SAS	STU	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG04204	hp1	a0001	c0001	t0001	g0043	SAS	STU	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG04204	hp2	a0002	c0002	t0001	g0001	SAS	STU	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18522	hp1	a0001	c0001	t0001	g0001	AFR	YRI	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18522	hp2	a0001	c0001	t0001	g0002	AFR	YRI	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18612	hp1	a0002	c0002	t0002	g0001	EAS	CHB	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18612	hp2	a0001	c0001	t0004	g0006	EAS	CHB	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18747	hp1	a0001	c0001	t0001	g0001	EAS	CHB	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18747	hp2	a0002	c0002	t0001	g0001	EAS	CHB	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18906	hp1	a0001	c0001	t0001	g0002	AFR	YRI	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18906	hp2	a0001	c0001	t0015	g0002	AFR	YRI	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18939	hp1	a0001	c0001	t0001	g0003	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18939	hp2	a0002	c0002	t0002	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18941	hp1	a0001	c0001	t0001	g0003	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18941	hp2	a0001	c0001	t0001	g0013	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18942	hp1	a0002	c0002	t0002	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18942	hp2	a0003	c0003	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18944	hp1	a0002	c0002	t0001	g0007	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18944	hp2	a0001	c0001	t0001	g0020	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18947	hp1	a0002	c0002	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18947	hp2	a0001	c0001	t0001	g0002	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18949	hp1	a0001	c0001	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18949	hp2	a0001	c0001	t0004	g0006	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18950	hp1	a0002	c0002	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18950	hp2	a0002	c0002	t0002	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18951	hp1	a0001	c0001	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18951	hp2	a0002	c0002	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18953	hp1	a0001	c0001	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18953	hp2	a0002	c0002	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18957	hp1	a0001	c0001	t0001	g0003	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18957	hp2	a0001	c0001	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18960	hp1	a0001	c0001	t0001	g0003	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18960	hp2	a0002	c0002	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18961	hp1	a0002	c0002	t0001	g0035	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18961	hp2	a0001	c0001	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18962	hp1	a0001	c0001	t0001	g0003	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18962	hp2	a0001	c0001	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18964	hp1	a0001	c0001	t0001	g0004	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18964	hp2	a0001	c0001	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18966	hp1	a0001	c0001	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18966	hp2	a0002	c0002	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18968	hp1	a0001	c0001	t0001	g0017	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18968	hp2	a0002	c0002	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18970	hp1	a0001	c0001	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18970	hp2	a0002	c0002	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18972	hp1	a0002	c0002	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18972	hp2	a0002	c0002	t0001	g0018	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18973	hp1	a0002	c0002	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18973	hp2	a0001	c0001	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18974	hp1	a0001	c0001	t0001	g0010	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18974	hp2	a0001	c0001	t0001	g0050	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18975	hp1	a0001	c0001	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18975	hp2	a0002	c0002	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18977	hp1	a0001	c0001	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18977	hp2	a0001	c0001	t0001	g0004	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18978	hp1	a0001	c0001	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18978	hp2	a0001	c0001	t0001	g0002	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18979	hp1	a0002	c0002	t0005	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18979	hp2	a0002	c0002	t0002	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18980	hp1	a0002	c0002	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18980	hp2	a0001	c0001	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18981	hp1	a0001	c0001	t0001	g0020	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18981	hp2	a0001	c0001	t0001	g0010	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18982	hp1	a0002	c0002	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18982	hp2	a0001	c0001	t0001	g0046	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18984	hp1	a0001	c0001	t0001	g0044	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18984	hp2	a0002	c0002	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18985	hp1	a0001	c0001	t0001	g0004	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18985	hp2	a0002	c0002	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18993	hp1	a0002	c0002	t0002	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18993	hp2	a0002	c0002	t0001	g0039	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18994	hp1	a0001	c0001	t0001	g0017	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18994	hp2	a0002	c0002	t0005	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18997	hp1	a0001	c0001	t0001	g0013	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18997	hp2	a0002	c0002	t0002	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19000	hp1	a0001	c0001	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19000	hp2	a0002	c0002	t0002	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19001	hp1	a0001	c0001	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19001	hp2	a0002	c0002	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19002	hp1	a0003	c0003	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19002	hp2	a0002	c0002	t0002	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19003	hp1	a0002	c0002	t0002	g0036	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19003	hp2	a0002	c0002	t0011	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19004	hp1	a0003	c0003	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19004	hp2	a0001	c0001	t0004	g0006	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19005	hp1	a0001	c0001	t0001	g0017	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19005	hp2	a0002	c0002	t0002	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19006	hp1	a0001	c0001	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19006	hp2	a0002	c0002	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19007	hp1	a0001	c0001	t0001	g0010	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19007	hp2	a0001	c0001	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19009	hp1	a0002	c0002	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19009	hp2	a0001	c0001	t0001	g0003	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19010	hp1	a0002	c0002	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19010	hp2	a0001	c0001	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19011	hp1	a0001	c0001	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19011	hp2	a0002	c0002	t0001	g0007	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19030	hp1	a0001	c0001	t0001	g0001	AFR	LWK	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19030	hp2	a0001	c0001	t0001	g0002	AFR	LWK	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19043	hp1	a0001	c0001	t0001	g0002	AFR	LWK	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19043	hp2	a0001	c0001	t0001	g0001	AFR	LWK	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19058	hp1	a0002	c0002	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19058	hp2	a0001	c0001	t0004	g0006	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19060	hp1	a0003	c0003	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19060	hp2	a0001	c0001	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19064	hp1	a0001	c0001	t0001	g0004	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19064	hp2	a0002	c0002	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19068	hp1	a0001	c0001	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19068	hp2	a0002	c0002	t0001	g0007	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19070	hp1	a0002	c0002	t0005	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19070	hp2	a0002	c0002	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19074	hp1	a0001	c0001	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19074	hp2	a0002	c0002	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19075	hp1	a0002	c0002	t0005	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19075	hp2	a0001	c0001	t0004	g0006	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19076	hp1	a0001	c0001	t0001	g0003	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19076	hp2	a0002	c0002	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19077	hp1	a0001	c0001	t0001	g0010	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19077	hp2	a0002	c0002	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19082	hp1	a0001	c0001	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19082	hp2	a0002	c0002	t0002	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19083	hp1	a0001	c0001	t0004	g0006	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19083	hp2	a0001	c0001	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19084	hp1	a0001	c0001	t0001	g0045	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19084	hp2	a0001	c0001	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19086	hp1	a0002	c0002	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19086	hp2	a0001	c0001	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19087	hp1	a0002	c0002	t0002	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19087	hp2	a0001	c0001	t0001	g0004	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19090	hp1	a0001	c0001	t0001	g0013	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19090	hp2	a0002	c0002	t0001	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19091	hp1	a0002	c0002	t0001	g0057	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19091	hp2	a0001	c0001	t0004	g0006	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19240	hp1	a0001	c0001	t0001	g0012	AFR	YRI	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA19240	hp2	a0001	c0001	t0001	g0002	AFR	YRI	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA20129	hp1	a0001	c0001	t0001	g0024	AFR	ASW	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA20129	hp2	a0001	c0001	t0003	g0055	AFR	ASW	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA20752	hp1	a0002	c0002	t0001	g0001	EUR	TSI	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA20752	hp2	a0002	c0002	t0005	g0001	EUR	TSI	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA20805	hp1	a0001	c0001	t0001	g0004	EUR	TSI	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA20805	hp2	a0002	c0002	t0001	g0008	EUR	TSI	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA20905	hp1	a0001	c0001	t0001	g0002	SAS	GIH	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA20905	hp2	a0002	c0002	t0001	g0001	SAS	GIH	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01123	hp1	a0001	c0001	t0001	g0004	AMR	CLM	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG01123	hp2	a0001	c0001	t0012	g0001	AMR	CLM	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02109	hp1	a0001	c0001	t0003	g0005	AFR	ACB	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02109	hp2	a0001	c0001	t0001	g0001	AFR	ACB	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02486	hp1	a0002	c0002	t0001	g0001	AFR	ACB	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02486	hp2	a0001	c0001	t0008	g0016	AFR	ACB	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02559	hp1	a0001	c0001	t0006	g0033	AFR	ACB	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG02559	hp2	a0001	c0001	t0001	g0001	AFR	ACB	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03471	hp1	a0001	c0001	t0001	g0001	AFR	MSL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG03471	hp2	a0001	c0001	t0001	g0002	AFR	MSL	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG06807	hp1	a0001	c0001	t0001	g0003	AFR	USA	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
HG06807	hp2	a0001	c0001	t0004	g0048	AFR	USA	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18955	hp1	a0002	c0002	t0002	g0001	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA18955	hp2	a0001	c0001	t0004	g0006	EAS	JPT	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA20300	hp1	a0002	c0002	t0001	g0037	AFR	USA	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA20300	hp2	a0001	c0001	t0003	g0059	AFR	USA	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA21309	hp1	a0001	c0001	t0003	g0005	AFR	LWK	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
NA21309	hp2	a0001	c0001	t0001	g0002	AFR	LWK	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
homoSapiens_chm13v2	hp1	a0002	c0002	t0001	g0001	REF	REF	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160
homoSapiens_grch38	hp1	a0001	c0001	t0001	g0027	REF	REF	RLIG1_chr12_88030536_88055160	RLIG1	chr12	88030536	88055160

chr:pos	ref	alt	# # of ahapid:amino-acid(protein) level	ahapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	chr	pos
chr12:88045723	A A	G G	1	a0004 a0004	3	HG01943.hp1 HG01952.hp2 HG01978.hp2 HG01943.hp1 HG01952.hp2 HG01978.hp2	missense_variant	MODERATE	c.563A>G c.563A>G	p.Asp188Gly p.Asp188Gly	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	5/7	676/2829	563/978	188/325	chr12	88045723
chr12:88046899	G G	C C	2	a0002 a0004 a0002 a0004	153	HG00280.hp2 HG00323.hp1 HG00423.hp1 others(150): Show HG00280.hp2 HG00323.hp1 HG00423.hp1 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00735.hp2 HG00741.hp1 HG01074.hp2 HG01099.hp1 HG01168.hp1 HG01168.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01255.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp2 HG01515.hp1 HG01891.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG02004.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02273.hp1 HG02273.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02486.hp1 HG02523.hp1 HG02615.hp2 HG02683.hp2 HG02717.hp1 HG02735.hp2 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02970.hp1 HG02976.hp1 HG03139.hp1 HG03239.hp1 HG03239.hp2 HG03654.hp1 HG03654.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp2 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04199.hp2 HG04204.hp2 NA18612.hp1 NA18747.hp2 NA18939.hp2 NA18942.hp1 NA18944.hp1 NA18947.hp1 NA18950.hp1 NA18950.hp2 NA18951.hp2 NA18953.hp2 NA18955.hp1 NA18960.hp2 NA18961.hp1 NA18966.hp2 NA18968.hp2 NA18970.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18975.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18982.hp1 NA18984.hp2 NA18985.hp2 NA18993.hp1 NA18993.hp2 NA18994.hp2 NA18997.hp2 NA19000.hp2 NA19001.hp2 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19005.hp2 NA19006.hp2 NA19009.hp1 NA19010.hp1 NA19011.hp2 NA19058.hp1 NA19064.hp2 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp2 NA19075.hp1 NA19076.hp2 NA19077.hp2 NA19082.hp2 NA19086.hp1 NA19087.hp1 NA19090.hp2 NA19091.hp1 NA20300.hp1 NA20752.hp1 NA20752.hp2 NA20805.hp2 NA20905.hp2 homoSapiens_chm13v2.hp1	missense_variant	MODERATE	c.712G>C c.712G>C	p.Val238Leu p.Val238Leu	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	6/7	825/2829	712/978	238/325	chr12	88046899
chr12:88046959	G G	A A	1	a0003 a0003	4	NA18942.hp2 NA19002.hp1 NA19004.hp1 others(1): Show NA18942.hp2 NA19002.hp1 NA19004.hp1 NA19060.hp1	missense_variant	MODERATE	c.772G>A c.772G>A	p.Asp258Asn p.Asp258Asn	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	6/7	885/2829	772/978	258/325	chr12	88046959

chr:pos	ref	alt	# # of chapid	chapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	pos

chr:pos	ref	alt	# # of thapid:transcript level	thapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	pos
chr12:88035537	C C	G G	1	a0001c0001t0015 a0001c0001t0015	1	NA18906.hp2 NA18906.hp2	5_prime_UTR_variant	MODIFIER	c.-112C>G c.-112C>G	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	1/7	112		chr12	88035537
chr12:88035547	G G	A A	1	a0002c0002t0002 a0002c0002t0002	18	HG00438.hp2 HG00597.hp2 HG02027.hp1 others(15): Show HG00438.hp2 HG00597.hp2 HG02027.hp1 HG02129.hp2 NA18612.hp1 NA18939.hp2 NA18942.hp1 NA18950.hp2 NA18955.hp1 NA18979.hp2 NA18993.hp1 NA18997.hp2 NA19000.hp2 NA19002.hp2 NA19003.hp1 NA19005.hp2 NA19082.hp2 NA19087.hp1	5_prime_UTR_premature_start_codon_gain_variant	LOW	c.-102G>A c.-102G>A	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	1/7			chr12	88035547
chr12:88048593	C C	CAAATT CAAATT	1	a0001c0001t0007 a0001c0001t0007	3	HG02257.hp2 HG03041.hp2 HG03540.hp1 HG02257.hp2 HG03041.hp2 HG03540.hp1	3_prime_UTR_variant	MODIFIER	c.174_178dupATTAA c.174_178dupATTAA	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	7/7	179	INFO_REALIGN_3_PRIME	chr12	88048593
chr12:88048632	TAGTA TAGTA	T T	3	a0001c0001t0004 a0001c0001t0008 a0001c0001t0010 a0001c0001t0004 a0001c0001t0008 a0001c0001t0010	15	HG01175.hp2 HG01255.hp1 HG02155.hp1 others(12): Show HG01175.hp2 HG01255.hp1 HG02155.hp1 HG02486.hp2 HG02886.hp2 HG03516.hp2 HG06807.hp2 NA18612.hp2 NA18949.hp2 NA18955.hp2 NA19004.hp2 NA19058.hp2 NA19075.hp2 NA19083.hp1 NA19091.hp2	3_prime_UTR_variant	MODIFIER	c.213_216delTAAG c.213_216delTAAG	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	7/7	213	INFO_REALIGN_3_PRIME	chr12	88048632
chr12:88048717	A A	G G	1	a0002c0002t0005 a0002c0002t0005	7	HG00621.hp2 HG02040.hp1 NA18979.hp1 others(4): Show HG00621.hp2 HG02040.hp1 NA18979.hp1 NA18994.hp2 NA19070.hp1 NA19075.hp1 NA20752.hp2	3_prime_UTR_variant	MODIFIER	c.295A>G c.295A>G	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	7/7	295		chr12	88048717
chr12:88048763	T T	C C	1	a0002c0002t0011 a0002c0002t0011	1	NA19003.hp2 NA19003.hp2	3_prime_UTR_variant	MODIFIER	c.341T>C c.341T>C	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	7/7	341		chr12	88048763
chr12:88048985	G G	C C	1	a0001c0001t0012 a0001c0001t0012	1	HG01123.hp2 HG01123.hp2	3_prime_UTR_variant	MODIFIER	c.563G>C c.563G>C	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	7/7	563		chr12	88048985
chr12:88049161	GAAAC GAAAC	G G	1	a0001c0001t0003 a0001c0001t0003	16	HG01109.hp2 HG01192.hp2 HG01243.hp2 others(13): Show HG01109.hp2 HG01192.hp2 HG01243.hp2 HG02055.hp1 HG02109.hp1 HG02258.hp2 HG02896.hp2 HG02970.hp2 HG03130.hp1 HG03130.hp2 HG03209.hp2 HG03579.hp1 HG03579.hp2 NA20129.hp2 NA20300.hp2 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.743_746delCAAA c.743_746delCAAA	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	7/7	743	INFO_REALIGN_3_PRIME	chr12	88049161
chr12:88049436	A A	G G	2	a0001c0001t0004 a0001c0001t0010 a0001c0001t0004 a0001c0001t0010	13	HG01175.hp2 HG01255.hp1 HG02155.hp1 others(10): Show HG01175.hp2 HG01255.hp1 HG02155.hp1 HG02886.hp2 HG06807.hp2 NA18612.hp2 NA18949.hp2 NA18955.hp2 NA19004.hp2 NA19058.hp2 NA19075.hp2 NA19083.hp1 NA19091.hp2	3_prime_UTR_variant	MODIFIER	c.1014A>G c.1014A>G	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	7/7	1014		chr12	88049436
chr12:88049467	C C	A A	1	a0001c0001t0013 a0001c0001t0013	1	HG02071.hp1 HG02071.hp1	3_prime_UTR_variant	MODIFIER	c.1045C>A c.1045C>A	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	7/7	1045		chr12	88049467
chr12:88049564	G G	T T	1	a0001c0001t0009 a0001c0001t0009	2	HG03209.hp1 HG03540.hp2 HG03209.hp1 HG03540.hp2	3_prime_UTR_variant	MODIFIER	c.1142G>T c.1142G>T	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	7/7	1142		chr12	88049564
chr12:88049717	A A	C C	1	a0001c0001t0006 a0001c0001t0006	6	HG01884.hp2 HG02559.hp1 HG02647.hp2 others(3): Show HG01884.hp2 HG02559.hp1 HG02647.hp2 HG02895.hp2 HG03225.hp1 HG03453.hp1	3_prime_UTR_variant	MODIFIER	c.1295A>C c.1295A>C	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	7/7	1295		chr12	88049717
chr12:88049810	CTA CTA	C C	1	a0001c0001t0003 a0001c0001t0003	16	HG01109.hp2 HG01192.hp2 HG01243.hp2 others(13): Show HG01109.hp2 HG01192.hp2 HG01243.hp2 HG02055.hp1 HG02109.hp1 HG02258.hp2 HG02896.hp2 HG02970.hp2 HG03130.hp1 HG03130.hp2 HG03209.hp2 HG03579.hp1 HG03579.hp2 NA20129.hp2 NA20300.hp2 NA21309.hp1	3_prime_UTR_variant	MODIFIER	c.1389_1390delTA c.1389_1390delTA	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	7/7	1389		chr12	88049810
chr12:88049864	G G	A A	1	a0001c0001t0010 a0001c0001t0010	1	HG02886.hp2 HG02886.hp2	3_prime_UTR_variant	MODIFIER	c.1442G>A c.1442G>A	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	7/7	1442		chr12	88049864
chr12:88050154	A A	C C	1	a0001c0001t0014 a0001c0001t0014	1	HG02630.hp2 HG02630.hp2	3_prime_UTR_variant	MODIFIER	c.1732A>C c.1732A>C	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	7/7	1732		chr12	88050154

chr:pos	ref	alt	# # of ghapid:genebody level	ghapids	# # of haplotypeids	haplotypeids	annotation	impact	hgvs_c	genename	geneid	featuretype	featureid	genebody_biotype	rank	status	chr	pos
chr12:88036018	C C	T T	1	a0001c0001t0003g0059 a0001c0001t0003g0059	1	NA20300.hp2 NA20300.hp2	intron_variant	MODIFIER	c.90+280C>T c.90+280C>T	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	1/6		chr12	88036018
chr12:88036204	A A	G G	1	a0001c0001t0001g0058 a0001c0001t0001g0058	1	HG01891.hp1 HG01891.hp1	intron_variant	MODIFIER	c.90+466A>G c.90+466A>G	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	1/6		chr12	88036204
chr12:88036404	G G	A A	1	a0002c0002t0001g0023 a0002c0002t0001g0023	1	HG00597.hp1 HG00597.hp1	intron_variant	MODIFIER	c.90+666G>A c.90+666G>A	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	1/6		chr12	88036404
chr12:88036416	T T	C C	1	a0002c0002t0001g0018 a0002c0002t0001g0018	2	HG03927.hp2 NA18972.hp2 HG03927.hp2 NA18972.hp2	intron_variant	MODIFIER	c.90+678T>C c.90+678T>C	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	1/6		chr12	88036416
chr12:88036611	C C	T T	1	a0001c0001t0006g0011 a0001c0001t0006g0011	4	HG01884.hp2 HG02647.hp2 HG02895.hp2 others(1): Show HG01884.hp2 HG02647.hp2 HG02895.hp2 HG03225.hp1	intron_variant	MODIFIER	c.90+873C>T c.90+873C>T	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	1/6		chr12	88036611
chr12:88036689	G G	T T	57	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(54): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0013 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0020 a0001c0001t0001g0034 a0001c0001t0001g0040 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0050 a0001c0001t0003g0005 a0001c0001t0003g0031 a0001c0001t0003g0055 a0001c0001t0003g0056 a0001c0001t0003g0059 a0001c0001t0004g0006 a0001c0001t0004g0048 a0001c0001t0006g0011 a0001c0001t0006g0032 a0001c0001t0006g0033 a0001c0001t0007g0021 a0001c0001t0007g0052 a0001c0001t0008g0016 a0001c0001t0010g0047 a0001c0001t0012g0001 a0001c0001t0013g0030 a0002c0002t0001g0001 a0002c0002t0001g0007 a0002c0002t0001g0008 a0002c0002t0001g0009 a0002c0002t0001g0015 a0002c0002t0001g0018 a0002c0002t0001g0022 a0002c0002t0001g0023 a0002c0002t0001g0035 a0002c0002t0001g0037 a0002c0002t0001g0038 a0002c0002t0001g0039 a0002c0002t0001g0041 a0002c0002t0001g0042 a0002c0002t0001g0049 a0002c0002t0001g0051 a0002c0002t0001g0053 a0002c0002t0001g0054 a0002c0002t0001g0057 a0002c0002t0002g0001 a0002c0002t0002g0036 a0002c0002t0005g0001 a0002c0002t0011g0001 a0003c0003t0001g0001 a0004c0004t0001g0014	314	HG00280.hp1 HG00280.hp2 HG00323.hp1 others(311): Show HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01515.hp1 HG01515.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02004.hp1 HG02004.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp2 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02293.hp1 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp2 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02717.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp2 HG02922.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03209.hp2 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03471.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp1 NA18944.hp2 NA18947.hp1 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18953.hp1 NA18953.hp2 NA18955.hp1 NA18955.hp2 NA18957.hp1 NA18957.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA18997.hp1 NA18997.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19043.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19064.hp1 NA19064.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19087.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp2 NA21309.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.90+951G>T c.90+951G>T	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	1/6		chr12	88036689
chr12:88036869	T T	C C	1	a0001c0001t0013g0030 a0001c0001t0013g0030	1	HG02071.hp1 HG02071.hp1	intron_variant	MODIFIER	c.90+1131T>C c.90+1131T>C	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	1/6		chr12	88036869
chr12:88036938	G G	A A	1	a0001c0001t0003g0031 a0001c0001t0003g0031	1	HG03579.hp1 HG03579.hp1	intron_variant	MODIFIER	c.90+1200G>A c.90+1200G>A	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	1/6		chr12	88036938
chr12:88037300	C C	T T	1	a0002c0002t0001g0057 a0002c0002t0001g0057	1	NA19091.hp1 NA19091.hp1	intron_variant	MODIFIER	c.90+1562C>T c.90+1562C>T	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	1/6		chr12	88037300
chr12:88037375	GAGA GAGA	G G	5	a0001c0001t0003g0005 a0001c0001t0003g0031 a0001c0001t0003g0055 others(2): Show a0001c0001t0003g0005 a0001c0001t0003g0031 a0001c0001t0003g0055 a0001c0001t0003g0056 a0001c0001t0003g0059	16	HG01109.hp2 HG01192.hp2 HG01243.hp2 others(13): Show HG01109.hp2 HG01192.hp2 HG01243.hp2 HG02055.hp1 HG02109.hp1 HG02258.hp2 HG02896.hp2 HG02970.hp2 HG03130.hp1 HG03130.hp2 HG03209.hp2 HG03579.hp1 HG03579.hp2 NA20129.hp2 NA20300.hp2 NA21309.hp1	intron_variant	MODIFIER	c.90+1640_90+1642del others(3): Show c.90+1640_90+1642delAAG	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	1/6	INFO_REALIGN_3_PRIME	chr12	88037375
chr12:88037502	T T	A A	1	a0001c0001t0001g0020 a0001c0001t0001g0020	2	NA18944.hp2 NA18981.hp1 NA18944.hp2 NA18981.hp1	intron_variant	MODIFIER	c.90+1764T>A c.90+1764T>A	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	1/6		chr12	88037502
chr12:88037647	T T	C C	2	a0001c0001t0006g0032 a0001c0001t0006g0033 a0001c0001t0006g0032 a0001c0001t0006g0033	2	HG02559.hp1 HG03453.hp1 HG02559.hp1 HG03453.hp1	intron_variant	MODIFIER	c.90+1909T>C c.90+1909T>C	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	1/6		chr12	88037647
chr12:88038089	G G	A A	2	a0001c0001t0003g0055 a0001c0001t0003g0056 a0001c0001t0003g0055 a0001c0001t0003g0056	2	HG03130.hp2 NA20129.hp2 HG03130.hp2 NA20129.hp2	intron_variant	MODIFIER	c.91-2059G>A c.91-2059G>A	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	1/6		chr12	88038089
chr12:88038186	A A	G G	1	a0001c0001t0001g0017 a0001c0001t0001g0017	3	NA18968.hp1 NA18994.hp1 NA19005.hp1 NA18968.hp1 NA18994.hp1 NA19005.hp1	intron_variant	MODIFIER	c.91-1962A>G c.91-1962A>G	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	1/6		chr12	88038186
chr12:88038196	T T	C C	1	a0001c0001t0001g0024 a0001c0001t0001g0024	1	NA20129.hp1 NA20129.hp1	intron_variant	MODIFIER	c.91-1952T>C c.91-1952T>C	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	1/6		chr12	88038196
chr12:88038281	C C	T T	1	a0001c0001t0006g0033 a0001c0001t0006g0033	1	HG02559.hp1 HG02559.hp1	intron_variant	MODIFIER	c.91-1867C>T c.91-1867C>T	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	1/6		chr12	88038281
chr12:88038293	CT CT	C C	3	a0001c0001t0006g0011 a0001c0001t0006g0032 a0001c0001t0006g0033 a0001c0001t0006g0011 a0001c0001t0006g0032 a0001c0001t0006g0033	6	HG01884.hp2 HG02559.hp1 HG02647.hp2 others(3): Show HG01884.hp2 HG02559.hp1 HG02647.hp2 HG02895.hp2 HG03225.hp1 HG03453.hp1	intron_variant	MODIFIER	c.91-1848delT c.91-1848delT	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	1/6	INFO_REALIGN_3_PRIME	chr12	88038293
chr12:88038455	A A	G G	1	a0002c0002t0001g0008 a0002c0002t0001g0008	6	HG01099.hp1 HG01346.hp2 HG02004.hp2 others(3): Show HG01099.hp1 HG01346.hp2 HG02004.hp2 HG02273.hp2 HG02300.hp1 NA20805.hp2	intron_variant	MODIFIER	c.91-1693A>G c.91-1693A>G	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	1/6		chr12	88038455
chr12:88038459	G G	A A	1	a0001c0001t0003g0055 a0001c0001t0003g0055	1	NA20129.hp2 NA20129.hp2	intron_variant	MODIFIER	c.91-1689G>A c.91-1689G>A	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	1/6		chr12	88038459
chr12:88039137	A A	G G	1	a0002c0002t0001g0054 a0002c0002t0001g0054	1	HG01346.hp1 HG01346.hp1	intron_variant	MODIFIER	c.91-1011A>G c.91-1011A>G	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	1/6		chr12	88039137
chr12:88039138	A A	G G	5	a0001c0001t0003g0005 a0001c0001t0003g0031 a0001c0001t0003g0055 others(2): Show a0001c0001t0003g0005 a0001c0001t0003g0031 a0001c0001t0003g0055 a0001c0001t0003g0056 a0001c0001t0003g0059	16	HG01109.hp2 HG01192.hp2 HG01243.hp2 others(13): Show HG01109.hp2 HG01192.hp2 HG01243.hp2 HG02055.hp1 HG02109.hp1 HG02258.hp2 HG02896.hp2 HG02970.hp2 HG03130.hp1 HG03130.hp2 HG03209.hp2 HG03579.hp1 HG03579.hp2 NA20129.hp2 NA20300.hp2 NA21309.hp1	intron_variant	MODIFIER	c.91-1010A>G c.91-1010A>G	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	1/6		chr12	88039138
chr12:88039144	T T	C C	1	a0001c0001t0001g0034 a0001c0001t0001g0034	1	HG03516.hp1 HG03516.hp1	intron_variant	MODIFIER	c.91-1004T>C c.91-1004T>C	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	1/6		chr12	88039144
chr12:88039774	T T	TA TA	1	a0001c0001t0006g0011 a0001c0001t0006g0011	4	HG01884.hp2 HG02647.hp2 HG02895.hp2 others(1): Show HG01884.hp2 HG02647.hp2 HG02895.hp2 HG03225.hp1	intron_variant	MODIFIER	c.91-373dupA c.91-373dupA	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	1/6	INFO_REALIGN_3_PRIME	chr12	88039774
chr12:88040018	A A	G G	1	a0002c0002t0001g0053 a0002c0002t0001g0053	1	HG02615.hp2 HG02615.hp2	intron_variant	MODIFIER	c.91-130A>G c.91-130A>G	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	1/6		chr12	88040018
chr12:88040374	G G	A A	1	a0001c0001t0007g0021 a0001c0001t0007g0021	2	HG03041.hp2 HG03540.hp1 HG03041.hp2 HG03540.hp1	intron_variant	MODIFIER	c.208+109G>A c.208+109G>A	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	2/6		chr12	88040374
chr12:88040600	C C	T T	1	a0001c0001t0001g0029 a0001c0001t0001g0029	1	HG03041.hp1 HG03041.hp1	intron_variant	MODIFIER	c.208+335C>T c.208+335C>T	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	2/6		chr12	88040600
chr12:88040763	C C	T T	1	a0001c0001t0007g0052 a0001c0001t0007g0052	1	HG02257.hp2 HG02257.hp2	intron_variant	MODIFIER	c.208+498C>T c.208+498C>T	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	2/6		chr12	88040763
chr12:88040796	AT AT	A A	57	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(54): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0013 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0020 a0001c0001t0001g0034 a0001c0001t0001g0040 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0050 a0001c0001t0003g0005 a0001c0001t0003g0031 a0001c0001t0003g0055 a0001c0001t0003g0056 a0001c0001t0003g0059 a0001c0001t0004g0006 a0001c0001t0004g0048 a0001c0001t0006g0011 a0001c0001t0006g0032 a0001c0001t0006g0033 a0001c0001t0007g0021 a0001c0001t0007g0052 a0001c0001t0008g0016 a0001c0001t0010g0047 a0001c0001t0012g0001 a0001c0001t0013g0030 a0002c0002t0001g0001 a0002c0002t0001g0007 a0002c0002t0001g0008 a0002c0002t0001g0009 a0002c0002t0001g0015 a0002c0002t0001g0018 a0002c0002t0001g0022 a0002c0002t0001g0023 a0002c0002t0001g0035 a0002c0002t0001g0037 a0002c0002t0001g0038 a0002c0002t0001g0039 a0002c0002t0001g0041 a0002c0002t0001g0042 a0002c0002t0001g0049 a0002c0002t0001g0051 a0002c0002t0001g0053 a0002c0002t0001g0054 a0002c0002t0001g0057 a0002c0002t0002g0001 a0002c0002t0002g0036 a0002c0002t0005g0001 a0002c0002t0011g0001 a0003c0003t0001g0001 a0004c0004t0001g0014	314	HG00280.hp1 HG00280.hp2 HG00323.hp1 others(311): Show HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01515.hp1 HG01515.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02004.hp1 HG02004.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp2 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02293.hp1 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp2 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02717.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp2 HG02922.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03209.hp2 HG03225.hp1 HG03239.hp2 HG03453.hp1 HG03471.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp1 NA18944.hp2 NA18947.hp1 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18953.hp1 NA18953.hp2 NA18955.hp1 NA18955.hp2 NA18957.hp1 NA18957.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA18997.hp1 NA18997.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19043.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19064.hp1 NA19064.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19087.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp2 NA21309.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.208+542delT c.208+542delT	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	2/6	INFO_REALIGN_3_PRIME	chr12	88040796
chr12:88041151	A A	T T	1	a0002c0002t0001g0051 a0002c0002t0001g0051	1	HG03927.hp1 HG03927.hp1	intron_variant	MODIFIER	c.208+886A>T c.208+886A>T	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	2/6		chr12	88041151
chr12:88041212	A A	T T	3	a0001c0001t0001g0004 a0001c0001t0001g0020 a0001c0001t0001g0050 a0001c0001t0001g0004 a0001c0001t0001g0020 a0001c0001t0001g0050	16	HG00642.hp1 HG01123.hp1 HG01358.hp1 others(13): Show HG00642.hp1 HG01123.hp1 HG01358.hp1 HG01934.hp2 HG01981.hp2 HG04115.hp2 HG04199.hp1 NA18944.hp2 NA18964.hp1 NA18974.hp2 NA18977.hp2 NA18981.hp1 NA18985.hp1 NA19064.hp1 NA19087.hp2 NA20805.hp1	intron_variant	MODIFIER	c.208+947A>T c.208+947A>T	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	2/6		chr12	88041212
chr12:88041760	A A	T T	1	a0002c0002t0001g0049 a0002c0002t0001g0049	1	HG02683.hp2 HG02683.hp2	intron_variant	MODIFIER	c.209-1065A>T c.209-1065A>T	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	2/6		chr12	88041760
chr12:88041768	T T	C C	43	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(40): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0013 a0001c0001t0001g0017 a0001c0001t0001g0020 a0001c0001t0001g0034 a0001c0001t0001g0040 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0050 a0001c0001t0012g0001 a0001c0001t0013g0030 a0002c0002t0001g0001 a0002c0002t0001g0007 a0002c0002t0001g0008 a0002c0002t0001g0009 a0002c0002t0001g0015 a0002c0002t0001g0018 a0002c0002t0001g0022 a0002c0002t0001g0023 a0002c0002t0001g0025 a0002c0002t0001g0035 a0002c0002t0001g0037 a0002c0002t0001g0038 a0002c0002t0001g0039 a0002c0002t0001g0041 a0002c0002t0001g0042 a0002c0002t0001g0049 a0002c0002t0001g0051 a0002c0002t0001g0053 a0002c0002t0001g0054 a0002c0002t0001g0057 a0002c0002t0002g0001 a0002c0002t0002g0036 a0002c0002t0005g0001 a0002c0002t0011g0001 a0003c0003t0001g0001 a0004c0004t0001g0014	274	HG00280.hp1 HG00280.hp2 HG00323.hp1 others(271): Show HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01175.hp1 HG01192.hp1 HG01243.hp1 HG01255.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01515.hp1 HG01515.hp2 HG01884.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02004.hp1 HG02004.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02293.hp1 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02615.hp2 HG02630.hp1 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02717.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02922.hp1 HG02970.hp1 HG02976.hp1 HG03098.hp2 HG03139.hp1 HG03239.hp1 HG03239.hp2 HG03471.hp1 HG03516.hp1 HG03654.hp1 HG03654.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG06807.hp1 NA18522.hp1 NA18612.hp1 NA18747.hp1 NA18747.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp1 NA18944.hp2 NA18947.hp1 NA18949.hp1 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18953.hp1 NA18953.hp2 NA18955.hp1 NA18957.hp1 NA18957.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA18997.hp1 NA18997.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19043.hp2 NA19058.hp1 NA19060.hp1 NA19060.hp2 NA19064.hp1 NA19064.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19087.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA20300.hp1 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.209-1057T>C c.209-1057T>C	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	2/6		chr12	88041768
chr12:88042088	A A	G G	2	a0001c0001t0003g0055 a0001c0001t0003g0056 a0001c0001t0003g0055 a0001c0001t0003g0056	2	HG03130.hp2 NA20129.hp2 HG03130.hp2 NA20129.hp2	intron_variant	MODIFIER	c.209-737A>G c.209-737A>G	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	2/6		chr12	88042088
chr12:88042217	A A	G G	1	a0001c0001t0001g0019 a0001c0001t0001g0019	2	HG02896.hp1 HG02897.hp1 HG02896.hp1 HG02897.hp1	intron_variant	MODIFIER	c.209-608A>G c.209-608A>G	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	2/6		chr12	88042217
chr12:88042290	C C	G G	1	a0001c0001t0004g0048 a0001c0001t0004g0048	1	HG06807.hp2 HG06807.hp2	intron_variant	MODIFIER	c.209-535C>G c.209-535C>G	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	2/6		chr12	88042290
chr12:88042399	G G	A A	2	a0001c0001t0006g0032 a0001c0001t0006g0033 a0001c0001t0006g0032 a0001c0001t0006g0033	2	HG02559.hp1 HG03453.hp1 HG02559.hp1 HG03453.hp1	intron_variant	MODIFIER	c.209-426G>A c.209-426G>A	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	2/6		chr12	88042399
chr12:88042469	T T	G G	1	a0002c0002t0001g0051 a0002c0002t0001g0051	1	HG03927.hp1 HG03927.hp1	intron_variant	MODIFIER	c.209-356T>G c.209-356T>G	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	2/6		chr12	88042469
chr12:88042480	G G	A A	2	a0001c0001t0001g0012 a0001c0001t0009g0012 a0001c0001t0001g0012 a0001c0001t0009g0012	3	HG03209.hp1 HG03540.hp2 NA19240.hp1 HG03209.hp1 HG03540.hp2 NA19240.hp1	intron_variant	MODIFIER	c.209-345G>A c.209-345G>A	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	2/6		chr12	88042480
chr12:88042485	G G	A A	3	a0001c0001t0004g0006 a0001c0001t0004g0048 a0001c0001t0010g0047 a0001c0001t0004g0006 a0001c0001t0004g0048 a0001c0001t0010g0047	13	HG01175.hp2 HG01255.hp1 HG02155.hp1 others(10): Show HG01175.hp2 HG01255.hp1 HG02155.hp1 HG02886.hp2 HG06807.hp2 NA18612.hp2 NA18949.hp2 NA18955.hp2 NA19004.hp2 NA19058.hp2 NA19075.hp2 NA19083.hp1 NA19091.hp2	intron_variant	MODIFIER	c.209-340G>A c.209-340G>A	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	2/6		chr12	88042485
chr12:88042688	A A	G G	1	a0001c0001t0001g0028 a0001c0001t0001g0028	1	HG02257.hp1 HG02257.hp1	intron_variant	MODIFIER	c.209-137A>G c.209-137A>G	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	2/6		chr12	88042688
chr12:88042779	A A	G G	1	a0001c0001t0001g0046 a0001c0001t0001g0046	1	NA18982.hp2 NA18982.hp2	intron_variant	MODIFIER	c.209-46A>G c.209-46A>G	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	2/6		chr12	88042779
chr12:88042999	A A	G G	1	a0001c0001t0001g0050 a0001c0001t0001g0050	1	NA18974.hp2 NA18974.hp2	intron_variant	MODIFIER	c.304+79A>G c.304+79A>G	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	3/6		chr12	88042999
chr12:88043063	G G	T T	1	a0002c0002t0001g0007 a0002c0002t0001g0007	9	HG00558.hp2 HG00673.hp2 HG01934.hp1 others(6): Show HG00558.hp2 HG00673.hp2 HG01934.hp1 HG01981.hp1 HG02074.hp1 HG02523.hp1 NA18944.hp1 NA19011.hp2 NA19068.hp2	intron_variant	MODIFIER	c.304+143G>T c.304+143G>T	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	3/6		chr12	88043063
chr12:88043139	C C	G G	1	a0001c0001t0001g0045 a0001c0001t0001g0045	1	NA19084.hp1 NA19084.hp1	intron_variant	MODIFIER	c.304+219C>G c.304+219C>G	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	3/6		chr12	88043139
chr12:88043402	G G	A A	5	a0001c0001t0001g0016 a0001c0001t0004g0006 a0001c0001t0004g0048 others(2): Show a0001c0001t0001g0016 a0001c0001t0004g0006 a0001c0001t0004g0048 a0001c0001t0008g0016 a0001c0001t0010g0047	16	HG01175.hp2 HG01255.hp1 HG02155.hp1 others(13): Show HG01175.hp2 HG01255.hp1 HG02155.hp1 HG02486.hp2 HG02886.hp2 HG03098.hp1 HG03516.hp2 HG06807.hp2 NA18612.hp2 NA18949.hp2 NA18955.hp2 NA19004.hp2 NA19058.hp2 NA19075.hp2 NA19083.hp1 NA19091.hp2	intron_variant	MODIFIER	c.305-197G>A c.305-197G>A	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	3/6		chr12	88043402
chr12:88043421	T T	A A	1	a0001c0001t0001g0013 a0001c0001t0001g0013	3	NA18941.hp2 NA18997.hp1 NA19090.hp1 NA18941.hp2 NA18997.hp1 NA19090.hp1	intron_variant	MODIFIER	c.305-178T>A c.305-178T>A	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	3/6		chr12	88043421
chr12:88043479	A A	G G	1	a0001c0001t0001g0044 a0001c0001t0001g0044	1	NA18984.hp1 NA18984.hp1	intron_variant	MODIFIER	c.305-120A>G c.305-120A>G	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	3/6		chr12	88043479
chr12:88044252	T T	C C	5	a0001c0001t0003g0005 a0001c0001t0003g0031 a0001c0001t0003g0055 others(2): Show a0001c0001t0003g0005 a0001c0001t0003g0031 a0001c0001t0003g0055 a0001c0001t0003g0056 a0001c0001t0003g0059	16	HG01109.hp2 HG01192.hp2 HG01243.hp2 others(13): Show HG01109.hp2 HG01192.hp2 HG01243.hp2 HG02055.hp1 HG02109.hp1 HG02258.hp2 HG02896.hp2 HG02970.hp2 HG03130.hp1 HG03130.hp2 HG03209.hp2 HG03579.hp1 HG03579.hp2 NA20129.hp2 NA20300.hp2 NA21309.hp1	intron_variant	MODIFIER	c.421+537T>C c.421+537T>C	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	4/6		chr12	88044252
chr12:88044395	C C	G G	1	a0002c0002t0001g0015 a0002c0002t0001g0015	3	HG00642.hp2 HG01952.hp1 HG01975.hp1 HG00642.hp2 HG01952.hp1 HG01975.hp1	intron_variant	MODIFIER	c.421+680C>G c.421+680C>G	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	4/6		chr12	88044395
chr12:88044507	T T	C C	2	a0001c0001t0007g0021 a0001c0001t0007g0052 a0001c0001t0007g0021 a0001c0001t0007g0052	3	HG02257.hp2 HG03041.hp2 HG03540.hp1 HG02257.hp2 HG03041.hp2 HG03540.hp1	intron_variant	MODIFIER	c.421+792T>C c.421+792T>C	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	4/6		chr12	88044507
chr12:88044590	C C	G G	2	a0001c0001t0006g0032 a0001c0001t0006g0033 a0001c0001t0006g0032 a0001c0001t0006g0033	2	HG02559.hp1 HG03453.hp1 HG02559.hp1 HG03453.hp1	intron_variant	MODIFIER	c.421+875C>G c.421+875C>G	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	4/6		chr12	88044590
chr12:88044659	C C	T T	1	a0001c0001t0001g0010 a0001c0001t0001g0010	4	NA18974.hp1 NA18981.hp2 NA19007.hp1 others(1): Show NA18974.hp1 NA18981.hp2 NA19007.hp1 NA19077.hp1	intron_variant	MODIFIER	c.422-923C>T c.422-923C>T	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	4/6		chr12	88044659
chr12:88044854	A A	G G	5	a0001c0001t0001g0003 a0001c0001t0001g0013 a0001c0001t0001g0043 others(2): Show a0001c0001t0001g0003 a0001c0001t0001g0013 a0001c0001t0001g0043 a0001c0001t0001g0045 a0001c0001t0013g0030	26	HG00323.hp2 HG00423.hp2 HG00609.hp1 others(23): Show HG00323.hp2 HG00423.hp2 HG00609.hp1 HG00738.hp2 HG01106.hp1 HG01928.hp2 HG02004.hp1 HG02071.hp1 HG02080.hp1 HG02148.hp2 HG02683.hp1 HG03710.hp1 HG04184.hp1 HG04204.hp1 HG06807.hp1 NA18939.hp1 NA18941.hp1 NA18941.hp2 NA18957.hp1 NA18960.hp1 NA18962.hp1 NA18997.hp1 NA19009.hp2 NA19076.hp1 NA19084.hp1 NA19090.hp1	intron_variant	MODIFIER	c.422-728A>G c.422-728A>G	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	4/6		chr12	88044854
chr12:88044877	A A	G G	1	a0002c0002t0001g0042 a0002c0002t0001g0042	1	HG02165.hp1 HG02165.hp1	intron_variant	MODIFIER	c.422-705A>G c.422-705A>G	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	4/6		chr12	88044877
chr12:88044909	A A	G G	2	a0001c0001t0001g0009 a0002c0002t0001g0009 a0001c0001t0001g0009 a0002c0002t0001g0009	4	HG00280.hp1 HG01168.hp1 HG01515.hp2 others(1): Show HG00280.hp1 HG01168.hp1 HG01515.hp2 HG02451.hp1	intron_variant	MODIFIER	c.422-673A>G c.422-673A>G	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	4/6		chr12	88044909
chr12:88045012	T T	C C	3	a0001c0001t0006g0011 a0001c0001t0006g0032 a0001c0001t0006g0033 a0001c0001t0006g0011 a0001c0001t0006g0032 a0001c0001t0006g0033	6	HG01884.hp2 HG02559.hp1 HG02647.hp2 others(3): Show HG01884.hp2 HG02559.hp1 HG02647.hp2 HG02895.hp2 HG03225.hp1 HG03453.hp1	intron_variant	MODIFIER	c.422-570T>C c.422-570T>C	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	4/6		chr12	88045012
chr12:88045020	T T	C C	1	a0002c0002t0001g0022 a0002c0002t0001g0022	2	HG02083.hp1 HG03239.hp2 HG02083.hp1 HG03239.hp2	intron_variant	MODIFIER	c.422-562T>C c.422-562T>C	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	4/6		chr12	88045020
chr12:88045112	A A	G G	1	a0002c0002t0001g0041 a0002c0002t0001g0041	1	HG02135.hp1 HG02135.hp1	intron_variant	MODIFIER	c.422-470A>G c.422-470A>G	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	4/6		chr12	88045112
chr12:88045134	C C	T T	2	a0001c0001t0007g0021 a0001c0001t0007g0052 a0001c0001t0007g0021 a0001c0001t0007g0052	3	HG02257.hp2 HG03041.hp2 HG03540.hp1 HG02257.hp2 HG03041.hp2 HG03540.hp1	intron_variant	MODIFIER	c.422-448C>T c.422-448C>T	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	4/6		chr12	88045134
chr12:88045358	T T	A A	1	a0001c0001t0001g0043 a0001c0001t0001g0043	1	HG04204.hp1 HG04204.hp1	intron_variant	MODIFIER	c.422-224T>A c.422-224T>A	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	4/6		chr12	88045358
chr12:88045459	A A	G G	1	a0001c0001t0001g0034 a0001c0001t0001g0034	1	HG03516.hp1 HG03516.hp1	intron_variant	MODIFIER	c.422-123A>G c.422-123A>G	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	4/6		chr12	88045459
chr12:88045813	A A	T T	1	a0001c0001t0001g0040 a0001c0001t0001g0040	1	HG02523.hp2 HG02523.hp2	intron_variant	MODIFIER	c.619+34A>T c.619+34A>T	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	5/6		chr12	88045813
chr12:88045988	C C	T T	1	a0001c0001t0001g0010 a0001c0001t0001g0010	4	NA18974.hp1 NA18981.hp2 NA19007.hp1 others(1): Show NA18974.hp1 NA18981.hp2 NA19007.hp1 NA19077.hp1	intron_variant	MODIFIER	c.619+209C>T c.619+209C>T	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	5/6		chr12	88045988
chr12:88046092	C C	T T	1	a0002c0002t0001g0039 a0002c0002t0001g0039	1	NA18993.hp2 NA18993.hp2	intron_variant	MODIFIER	c.619+313C>T c.619+313C>T	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	5/6		chr12	88046092
chr12:88046106	A A	G G	1	a0001c0001t0010g0047 a0001c0001t0010g0047	1	HG02886.hp2 HG02886.hp2	intron_variant	MODIFIER	c.619+327A>G c.619+327A>G	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	5/6		chr12	88046106
chr12:88046295	G G	A A	69	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(66): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0024 a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0034 a0001c0001t0001g0040 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0050 a0001c0001t0001g0058 a0001c0001t0003g0005 a0001c0001t0003g0031 a0001c0001t0003g0055 a0001c0001t0003g0056 a0001c0001t0003g0059 a0001c0001t0004g0006 a0001c0001t0004g0048 a0001c0001t0006g0011 a0001c0001t0006g0032 a0001c0001t0006g0033 a0001c0001t0007g0021 a0001c0001t0007g0052 a0001c0001t0008g0016 a0001c0001t0009g0012 a0001c0001t0010g0047 a0001c0001t0012g0001 a0001c0001t0013g0030 a0001c0001t0014g0002 a0001c0001t0015g0002 a0002c0002t0001g0001 a0002c0002t0001g0007 a0002c0002t0001g0008 a0002c0002t0001g0009 a0002c0002t0001g0015 a0002c0002t0001g0018 a0002c0002t0001g0022 a0002c0002t0001g0023 a0002c0002t0001g0025 a0002c0002t0001g0035 a0002c0002t0001g0037 a0002c0002t0001g0038 a0002c0002t0001g0039 a0002c0002t0001g0041 a0002c0002t0001g0042 a0002c0002t0001g0049 a0002c0002t0001g0051 a0002c0002t0001g0053 a0002c0002t0001g0054 a0002c0002t0001g0057 a0002c0002t0002g0001 a0002c0002t0002g0036 a0002c0002t0005g0001 a0002c0002t0011g0001 a0003c0003t0001g0001 a0004c0004t0001g0014	355	HG00280.hp1 HG00280.hp2 HG00323.hp1 others(352): Show HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01515.hp1 HG01515.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02004.hp1 HG02004.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp1 NA18944.hp2 NA18947.hp1 NA18947.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18953.hp1 NA18953.hp2 NA18955.hp1 NA18955.hp2 NA18957.hp1 NA18957.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA18997.hp1 NA18997.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19064.hp1 NA19064.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19087.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.620-512G>A c.620-512G>A	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	5/6		chr12	88046295
chr12:88046390	A A	C C	1	a0004c0004t0001g0014 a0004c0004t0001g0014	3	HG01943.hp1 HG01952.hp2 HG01978.hp2 HG01943.hp1 HG01952.hp2 HG01978.hp2	intron_variant	MODIFIER	c.620-417A>C c.620-417A>C	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	5/6		chr12	88046390
chr12:88046560	A A	AG AG	58	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(55): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0013 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0020 a0001c0001t0001g0034 a0001c0001t0001g0040 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0050 a0001c0001t0003g0005 a0001c0001t0003g0031 a0001c0001t0003g0055 a0001c0001t0003g0056 a0001c0001t0003g0059 a0001c0001t0004g0006 a0001c0001t0004g0048 a0001c0001t0006g0011 a0001c0001t0006g0032 a0001c0001t0006g0033 a0001c0001t0007g0021 a0001c0001t0007g0052 a0001c0001t0008g0016 a0001c0001t0010g0047 a0001c0001t0012g0001 a0001c0001t0013g0030 a0002c0002t0001g0001 a0002c0002t0001g0007 a0002c0002t0001g0008 a0002c0002t0001g0009 a0002c0002t0001g0015 a0002c0002t0001g0018 a0002c0002t0001g0022 a0002c0002t0001g0023 a0002c0002t0001g0025 a0002c0002t0001g0035 a0002c0002t0001g0037 a0002c0002t0001g0038 a0002c0002t0001g0039 a0002c0002t0001g0041 a0002c0002t0001g0042 a0002c0002t0001g0049 a0002c0002t0001g0051 a0002c0002t0001g0053 a0002c0002t0001g0054 a0002c0002t0001g0057 a0002c0002t0002g0001 a0002c0002t0002g0036 a0002c0002t0005g0001 a0002c0002t0011g0001 a0003c0003t0001g0001 a0004c0004t0001g0014	315	HG00280.hp1 HG00280.hp2 HG00323.hp1 others(312): Show HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01168.hp1 HG01168.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01515.hp1 HG01515.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02004.hp1 HG02004.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp2 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02293.hp1 HG02300.hp1 HG02300.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02559.hp2 HG02615.hp2 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02717.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp2 HG02922.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03209.hp2 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03471.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp1 NA18944.hp2 NA18947.hp1 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18953.hp1 NA18953.hp2 NA18955.hp1 NA18955.hp2 NA18957.hp1 NA18957.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18964.hp1 NA18964.hp2 NA18966.hp1 NA18966.hp2 NA18968.hp1 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA18997.hp1 NA18997.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19006.hp1 NA19006.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19030.hp1 NA19043.hp2 NA19058.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19064.hp1 NA19064.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19075.hp1 NA19075.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19086.hp1 NA19086.hp2 NA19087.hp1 NA19087.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp2 NA21309.hp1 homoSapiens_chm13v2.hp1	intron_variant	MODIFIER	c.620-246dupG c.620-246dupG	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	5/6	INFO_REALIGN_3_PRIME	chr12	88046560
chr12:88047016	A A	G G	1	a0001c0001t0006g0011 a0001c0001t0006g0011	4	HG01884.hp2 HG02647.hp2 HG02895.hp2 others(1): Show HG01884.hp2 HG02647.hp2 HG02895.hp2 HG03225.hp1	intron_variant	MODIFIER	c.789+40A>G c.789+40A>G	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	6/6		chr12	88047016
chr12:88047027	A A	G G	1	a0001c0001t0001g0026 a0001c0001t0001g0026	1	HG02615.hp1 HG02615.hp1	intron_variant	MODIFIER	c.789+51A>G c.789+51A>G	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	6/6		chr12	88047027
chr12:88047220	G G	C C	3	a0002c0002t0001g0007 a0002c0002t0001g0023 a0002c0002t0001g0035 a0002c0002t0001g0007 a0002c0002t0001g0023 a0002c0002t0001g0035	11	HG00558.hp2 HG00597.hp1 HG00673.hp2 others(8): Show HG00558.hp2 HG00597.hp1 HG00673.hp2 HG01934.hp1 HG01981.hp1 HG02074.hp1 HG02523.hp1 NA18944.hp1 NA18961.hp1 NA19011.hp2 NA19068.hp2	intron_variant	MODIFIER	c.789+244G>C c.789+244G>C	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	6/6		chr12	88047220
chr12:88047369	T T	G G	5	a0001c0001t0001g0016 a0001c0001t0004g0006 a0001c0001t0004g0048 others(2): Show a0001c0001t0001g0016 a0001c0001t0004g0006 a0001c0001t0004g0048 a0001c0001t0008g0016 a0001c0001t0010g0047	16	HG01175.hp2 HG01255.hp1 HG02155.hp1 others(13): Show HG01175.hp2 HG01255.hp1 HG02155.hp1 HG02486.hp2 HG02886.hp2 HG03098.hp1 HG03516.hp2 HG06807.hp2 NA18612.hp2 NA18949.hp2 NA18955.hp2 NA19004.hp2 NA19058.hp2 NA19075.hp2 NA19083.hp1 NA19091.hp2	intron_variant	MODIFIER	c.789+393T>G c.789+393T>G	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	6/6		chr12	88047369
chr12:88047509	C C	T T	1	a0002c0002t0001g0038 a0002c0002t0001g0038	1	HG01261.hp1 HG01261.hp1	intron_variant	MODIFIER	c.789+533C>T c.789+533C>T	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	6/6		chr12	88047509
chr12:88047801	C C	T T	3	a0001c0001t0006g0011 a0001c0001t0006g0032 a0001c0001t0006g0033 a0001c0001t0006g0011 a0001c0001t0006g0032 a0001c0001t0006g0033	6	HG01884.hp2 HG02559.hp1 HG02647.hp2 others(3): Show HG01884.hp2 HG02559.hp1 HG02647.hp2 HG02895.hp2 HG03225.hp1 HG03453.hp1	intron_variant	MODIFIER	c.790-433C>T c.790-433C>T	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	6/6		chr12	88047801
chr12:88048039	G G	T T	1	a0002c0002t0001g0037 a0002c0002t0001g0037	1	NA20300.hp1 NA20300.hp1	intron_variant	MODIFIER	c.790-195G>T c.790-195G>T	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	6/6		chr12	88048039
chr12:88048114	A A	C C	1	a0001c0001t0006g0011 a0001c0001t0006g0011	4	HG01884.hp2 HG02647.hp2 HG02895.hp2 others(1): Show HG01884.hp2 HG02647.hp2 HG02895.hp2 HG03225.hp1	intron_variant	MODIFIER	c.790-120A>C c.790-120A>C	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	6/6		chr12	88048114
chr12:88048116	A A	C C	1	a0001c0001t0001g0019 a0001c0001t0001g0019	2	HG02896.hp1 HG02897.hp1 HG02896.hp1 HG02897.hp1	intron_variant	MODIFIER	c.790-118A>C c.790-118A>C	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	6/6		chr12	88048116
chr12:88048134	G G	T T	1	a0002c0002t0002g0036 a0002c0002t0002g0036	1	NA19003.hp1 NA19003.hp1	intron_variant	MODIFIER	c.790-100G>T c.790-100G>T	RLIG1	ENSG00000133641.18	transcript	ENST00000356891.4	protein_coding	6/6		chr12	88048134

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🧬 JoGo Online Haplotype Explorer RLIG1_chr12_88030536_88055160

JoGo Local Haplotype Explorer (on iGV) RLIG1_chr12_88030536_88055160

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ACTG-Haplotype Mutation Positions 3D Viewer

🧬 Gene Summary

AAmino acid(protein) Level Haplotype Info (Total: 4)

CCoding Level Haplotype Info (Total: 4)

TTranscript Level Haplotype Info (Total: 15)

GGenebody Level Haplotype Info (Total: 59)

A C AC Level (Amino Acid + Coding) Haplotype Info (Total: 4)

A C T ACT Level (Amino Acid + Coding + Transcript) Haplotype Info (Total: 18)

A C T G ACTG Level (Amino Acid + Coding + Transcript + Genebody) Haplotype Info (Total: 70)

Haplotype Details by Sample (Haploid Level) (Total: 356)

AAmino acid(protein) Level Haplotype Related Variants (Effect to Protein Coding Variants) (Total: 3)

CCoding Level Variants (Synonymous Mutations) (Total: 0)

TTranscript Level Haplotype Variants (5'UTR+3'UTR) (Total: 15)

GGenebody Level Haplotype Variants (Intron) (Total: 78)

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Annotation (Repeats)

Annotation (SNP Array)