regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SLFN5_chr17_35238072_35278655 | 35277357 | CA | C | downstream_gene_variant | MODIFIER | HG01192.hp2 HG02486.hp2 HG02615.hp1 others(9): Show |
a0001a0003a0005others(1): Show | a0001c0001a0001c0006a0003c0003others(2): Show | a0001c0001t0055a0001c0001t0077a0001c0006t0050others(4): Show | a0001c0001t0055g0027a0001c0001t0077g0143a0001c0006t0050g0041others(7): Show | 12 | 446 | 0.0269 | -1 | c.*11 others(7): Show |
SLFN5 | ENSG00000166750.10 | transcript | ENST00000299977.9 | protein_coding | 3703 | chr17 | TogoVar | ||||||
SLFNL1_chr1_41010597_41026725 | 41018828 | GT | G | intron_variant | MODIFIER | HG00099.hp1 HG00738.hp1 HG01167.hp2 others(29): Show |
a0001a0002a0013 | a0001c0001a0001c0024a0002c0002others(1): Show | a0001c0001t0001a0001c0024t0001a0002c0002t0001others(1): Show | a0001c0001t0001g0005a0001c0001t0001g0031a0001c0001t0001g0033others(4): Show | 32 | 430 | 0.0744 | -1 | c.436 others(8): Show |
SLFNL1 | ENSG00000171790.16 | transcript | ENST00000302946.13 | protein_coding | 3/5 | chr1 | TogoVar | ||||||
SLFNL1_chr1_41010597_41026725 | 41024409 | TC | T | upstream_gene_variant | MODIFIER | HG00280.hp1 HG00609.hp2 HG01358.hp2 others(32): Show |
a0001a0002 | a0001c0001a0002c0002a0002c0022 | a0001c0001t0001a0001c0001t0003a0002c0002t0003others(1): Show | a0001c0001t0001g0105a0001c0001t0003g0008a0001c0001t0003g0020others(12): Show | 35 | 430 | 0.0814 | -1 | c.-29 others(6): Show |
SLFNL1 | ENSG00000171790.16 | transcript | ENST00000302946.13 | protein_coding | 2685 | chr1 | TogoVar | ||||||
SLFNL1_chr1_41010597_41026725 | 41025898 | CA | C | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00323.hp1 others(96): Show |
a0001a0002a0004others(6): Show | a0001c0001a0002c0002a0004c0004others(8): Show | a0001c0001t0001a0001c0001t0002a0002c0002t0002others(12): Show | a0001c0001t0001g0031a0001c0001t0002g0002a0001c0001t0002g0009others(26): Show | 99 | 430 | 0.2302 | -1 | c.-44 others(6): Show |
SLFNL1 | ENSG00000171790.16 | transcript | ENST00000302946.13 | protein_coding | 4174 | chr1 | TogoVar | ||||||
SLIRP_chr14_77703103_77722598 | 77705411 | GA | G | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00323.hp1 others(89): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0002t0001 | a0001c0001t0001g0002a0001c0001t0001g0005a0001c0001t0001g0006others(27): Show | 92 | 404 | 0.2277 | -1 | c.-27 others(6): Show |
SLIRP | ENSG00000119705.10 | transcript | ENST00000557342.6 | protein_coding | 2691 | chr14 | TogoVar | ||||||
SLIRP_chr14_77703103_77722598 | 77712060 | AG | A | intron_variant | MODIFIER | HG02451.hp2 HG02572.hp2 HG02818.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0023a0001c0001t0001g0096a0001c0001t0001g0097 | 6 | 404 | 0.0149 | -1 | c.156 others(9): Show |
SLIRP | ENSG00000119705.10 | transcript | ENST00000557342.6 | protein_coding | 2/3 | chr14 | TogoVar | ||||||
SLIRP_chr14_77703103_77722598 | 77712440 | AT | A | intron_variant | MODIFIER | HG01891.hp1 HG02559.hp2 HG02630.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0029a0001c0001t0001g0034a0001c0001t0001g0050others(1): Show | 7 | 404 | 0.0173 | -1 | c.156 others(9): Show |
SLIRP | ENSG00000119705.10 | transcript | ENST00000557342.6 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
SLIRP_chr14_77703103_77722598 | 77715038 | GT | G | intron_variant | MODIFIER | HG01257.hp2 HG01258.hp1 HG03710.hp1 others(13): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0006a0001c0001t0001g0028a0001c0001t0001g0036others(3): Show | 16 | 404 | 0.0396 | -1 | c.157 others(8): Show |
SLIRP | ENSG00000119705.10 | transcript | ENST00000557342.6 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
SLIRP_chr14_77703103_77722598 | 77716642 | CA | C | intron_variant | MODIFIER | HG00280.hp1 HG00323.hp1 HG00738.hp1 others(68): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0001a0001c0002t0001a0002c0003t0001 | a0001c0001t0001g0004a0001c0001t0001g0006a0001c0001t0001g0009others(23): Show | 71 | 404 | 0.1757 | -1 | c.264 others(8): Show |
SLIRP | ENSG00000119705.10 | transcript | ENST00000557342.6 | protein_coding | 3/3 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
SLIRP_chr14_77703103_77722598 | 77717698 | AT | A | downstream_gene_variant | MODIFIER | HG02559.hp2 HG02809.hp2 NA18522.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0029 | 3 | 404 | 0.0074 | -1 | c.*13 others(5): Show |
SLIRP | ENSG00000119705.10 | transcript | ENST00000557342.6 | protein_coding | 101 | chr14 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97008696 | CA | C | intron_variant | MODIFIER | HG02451.hp1 HG03098.hp2 HG03209.hp2 others(2): Show |
a0001 | a0001c0001a0001c0006a0001c0008others(1): Show | a0001c0001t0001a0001c0006t0014a0001c0008t0003others(1): Show | a0001c0001t0001g0160a0001c0006t0014g0213a0001c0008t0003g0085others(2): Show | 5 | 256 | 0.0195 | -1 | c.334 others(10): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 31/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97014865 | CA | C | intron_variant | MODIFIER | HG00639.hp1 HG00673.hp2 HG00735.hp2 others(33): Show |
a0001 | a0001c0001a0001c0002a0001c0004others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(10): Show | a0001c0001t0001g0022a0001c0001t0001g0026a0001c0001t0001g0034others(33): Show | 36 | 256 | 0.1406 | -1 | c.297 others(9): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 28/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97019982 | AT | A | intron_variant | MODIFIER | HG00438.hp2 HG00544.hp1 HG00558.hp2 others(39): Show |
a0001a0003a0005others(1): Show | a0001c0001a0001c0002a0001c0003others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0017others(13): Show | a0001c0001t0001g0185a0001c0001t0002g0008a0001c0001t0002g0016others(39): Show | 42 | 256 | 0.1641 | -1 | c.274 others(9): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 26/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97021558 | CT | C | intron_variant | MODIFIER | HG00558.hp1 HG00639.hp2 HG00741.hp1 others(64): Show |
a0001a0002a0006 | a0001c0001a0001c0002a0001c0003others(11): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(21): Show | a0001c0001t0001g0004a0001c0001t0001g0007a0001c0001t0001g0009others(64): Show | 67 | 256 | 0.2617 | -1 | c.258 others(9): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 25/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97023217 | AT | A | intron_variant | MODIFIER | HG00639.hp2 HG02895.hp1 HG02896.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0009a0001c0001t0001g0118a0001c0001t0001g0119others(2): Show | 5 | 256 | 0.0195 | -1 | c.258 others(10): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 25/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97032570 | CA | C | intron_variant | MODIFIER | HG01070.hp2 HG01071.hp1 HG01167.hp1 others(13): Show |
a0001 | a0001c0001a0001c0002a0001c0004others(4): Show | a0001c0001t0001a0001c0001t0013a0001c0002t0001others(6): Show | a0001c0001t0001g0100a0001c0001t0001g0135a0001c0001t0001g0160others(13): Show | 16 | 256 | 0.0625 | -1 | c.243 others(9): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 23/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97032750 | GT | G | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00280.hp2 others(99): Show |
a0001a0007 | a0001c0001a0001c0002a0001c0003others(10): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(23): Show | a0001c0001t0001g0022a0001c0001t0001g0043a0001c0001t0001g0048others(99): Show | 102 | 256 | 0.3984 | -1 | c.243 others(10): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 23/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97033050 | CT | C | intron_variant | MODIFIER | HG01243.hp1 HG01891.hp1 HG01891.hp2 others(12): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(5): Show | a0001c0001t0001a0001c0001t0004a0001c0002t0001others(9): Show | a0001c0001t0001g0160a0001c0001t0001g0188a0001c0001t0004g0200others(12): Show | 15 | 256 | 0.0586 | -1 | c.243 others(10): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 23/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97033860 | AT | A | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00639.hp2 others(34): Show |
a0001a0002a0007 | a0001c0001a0001c0003a0001c0004others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(15): Show | a0001c0001t0001g0007a0001c0001t0001g0009a0001c0001t0001g0054others(34): Show | 37 | 256 | 0.1445 | -1 | c.243 others(9): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 23/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97041473 | AT | A | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00738.hp2 others(18): Show |
a0001a0002 | a0001c0001a0001c0003a0001c0005others(2): Show | a0001c0001t0001a0001c0003t0001a0001c0003t0002others(6): Show | a0001c0001t0001g0050a0001c0003t0001g0035a0001c0003t0001g0089others(18): Show | 21 | 256 | 0.0820 | -1 | c.216 others(10): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 20/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97050983 | GA | G | intron_variant | MODIFIER | HG01123.hp2 HG01891.hp2 HG02071.hp1 others(28): Show |
a0001a0003 | a0001c0001a0001c0004a0001c0006others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(8): Show | a0001c0001t0001g0007a0001c0001t0001g0043a0001c0001t0001g0078others(28): Show | 31 | 256 | 0.1211 | -1 | c.130 others(10): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 13/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97051261 | CA | C | intron_variant | MODIFIER | HG00280.hp1 HG00280.hp2 HG00408.hp1 others(150): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0003a0001c0004others(13): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(33): Show | a0001c0001t0001g0004a0001c0001t0001g0007a0001c0001t0001g0011others(150): Show | 153 | 256 | 0.5977 | -1 | c.130 others(10): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 13/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97051811 | CA | C | intron_variant | MODIFIER | HG00544.hp1 HG00558.hp1 HG00597.hp2 others(73): Show |
a0001a0002a0005 | a0001c0001a0001c0002a0001c0003others(10): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0010others(21): Show | a0001c0001t0001g0004a0001c0001t0001g0009a0001c0001t0001g0011others(73): Show | 76 | 256 | 0.2969 | -1 | c.130 others(10): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 13/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97056761 | TG | T | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00544.hp1 others(112): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0003others(14): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(35): Show | a0001c0001t0001g0007a0001c0001t0001g0009a0001c0001t0001g0041others(112): Show | 115 | 256 | 0.4492 | -1 | c.115 others(9): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 12/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97085386 | CT | C | intron_variant | MODIFIER | HG01081.hp1 HG02145.hp1 HG02615.hp1 others(11): Show |
a0001a0005 | a0001c0001a0001c0003a0001c0005others(4): Show | a0001c0001t0001a0001c0003t0001a0001c0003t0002others(6): Show | a0001c0001t0001g0160a0001c0001t0001g0203a0001c0003t0001g0064others(11): Show | 14 | 256 | 0.0547 | -1 | c.414 others(10): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 4/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97090597 | TG | T | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(252): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0002a0001c0003others(29): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(68): Show | a0001c0001t0001g0004a0001c0001t0001g0007a0001c0001t0001g0009others(252): Show | 255 | 256 | 0.9961 | -1 | c.414 others(10): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 4/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97102438 | AG | A | intron_variant | MODIFIER | HG02258.hp1 HG02559.hp1 HG02896.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0121a0001c0001t0001g0178a0001c0001t0001g0247 | 3 | 256 | 0.0117 | -1 | c.414 others(10): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 4/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97105782 | AG | A | intron_variant | MODIFIER | HG02109.hp1 HG02451.hp2 HG03225.hp1 others(3): Show |
a0001a0003 | a0001c0001a0003c0029 | a0001c0001t0001a0001c0001t0004a0001c0001t0011others(3): Show | a0001c0001t0001g0156a0001c0001t0004g0019a0001c0001t0011g0150others(3): Show | 6 | 256 | 0.0234 | -1 | c.414 others(10): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 4/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97106641 | GT | G | intron_variant | MODIFIER | HG00558.hp1 HG02602.hp1 HG02738.hp1 others(10): Show |
a0001a0005 | a0001c0001a0001c0002a0001c0004others(3): Show | a0001c0001t0001a0001c0002t0001a0001c0002t0002others(5): Show | a0001c0001t0001g0241a0001c0002t0001g0037a0001c0002t0001g0120others(10): Show | 13 | 256 | 0.0508 | -1 | c.414 others(10): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 4/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97108886 | CA | C | intron_variant | MODIFIER | HG00408.hp1 HG01071.hp1 HG01109.hp1 others(46): Show |
a0001a0002a0004others(1): Show | a0001c0001a0001c0002a0001c0003others(13): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(21): Show | a0001c0001t0001g0041a0001c0001t0001g0043a0001c0001t0001g0054others(46): Show | 49 | 256 | 0.1914 | -1 | c.414 others(10): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 4/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97109198 | GA | G | intron_variant | MODIFIER | HG02055.hp1 HG02145.hp2 HG02615.hp2 others(4): Show |
a0001 | a0001c0001a0001c0007 | a0001c0001t0001a0001c0007t0001a0001c0007t0003 | a0001c0001t0001g0124a0001c0007t0001g0057a0001c0007t0001g0058others(4): Show | 7 | 256 | 0.0273 | -1 | c.414 others(10): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 4/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97113557 | GT | G | intron_variant | MODIFIER | HG00639.hp2 HG01243.hp1 HG01884.hp1 others(9): Show |
a0001 | a0001c0001a0001c0003a0001c0005others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0003t0011others(3): Show | a0001c0001t0001g0004a0001c0001t0001g0009a0001c0001t0001g0011others(9): Show | 12 | 256 | 0.0469 | -1 | c.413 others(10): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 4/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97123789 | GA | G | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00280.hp2 others(117): Show |
a0001a0005a0007 | a0001c0001a0001c0002a0001c0003others(14): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(32): Show | a0001c0001t0001g0007a0001c0001t0001g0022a0001c0001t0001g0023others(117): Show | 120 | 256 | 0.4688 | -1 | c.413 others(10): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 4/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97125533 | CA | C | intron_variant | MODIFIER | HG00140.hp2 HG00408.hp1 HG00558.hp1 others(65): Show |
a0001a0002a0004others(2): Show | a0001c0001a0001c0002a0001c0003others(14): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(28): Show | a0001c0001t0001g0041a0001c0001t0001g0043a0001c0001t0001g0050others(65): Show | 68 | 256 | 0.2656 | -1 | c.413 others(10): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 4/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97125847 | CA | C | intron_variant | MODIFIER | HG00639.hp2 HG01884.hp1 HG02145.hp1 others(6): Show |
a0001 | a0001c0001a0001c0003a0001c0030 | a0001c0001t0001a0001c0003t0011a0001c0030t0001 | a0001c0001t0001g0009a0001c0001t0001g0011a0001c0001t0001g0121others(6): Show | 9 | 256 | 0.0352 | -1 | c.413 others(10): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 4/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97127285 | CA | C | intron_variant | MODIFIER | HG00280.hp1 HG00280.hp2 HG00408.hp2 others(99): Show |
a0001a0007 | a0001c0001a0001c0002a0001c0003others(11): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(22): Show | a0001c0001t0001g0007a0001c0001t0001g0022a0001c0001t0001g0023others(99): Show | 102 | 256 | 0.3984 | -1 | c.413 others(10): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 4/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97129383 | CA | C | intron_variant | MODIFIER | HG01358.hp1 HG01361.hp2 HG01515.hp1 others(14): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(5): Show | a0001c0001t0001a0001c0002t0001a0001c0003t0001others(7): Show | a0001c0001t0001g0071a0001c0001t0001g0078a0001c0001t0001g0132others(14): Show | 17 | 256 | 0.0664 | -1 | c.413 others(10): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 4/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97138649 | GT | G | intron_variant | MODIFIER | HG01070.hp2 HG01071.hp1 HG01257.hp2 others(24): Show |
a0001a0004 | a0001c0001a0001c0002a0001c0004others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(10): Show | a0001c0001t0001g0041a0001c0001t0001g0054a0001c0001t0001g0094others(24): Show | 27 | 256 | 0.1055 | -1 | c.413 others(10): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 4/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97144197 | CA | C | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(206): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0002a0001c0003others(25): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(61): Show | a0001c0001t0001g0004a0001c0001t0001g0007a0001c0001t0001g0026others(206): Show | 209 | 256 | 0.8164 | -1 | c.413 others(10): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 4/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97148289 | CT | C | intron_variant | MODIFIER | HG00140.hp1 HG00408.hp1 HG00438.hp1 others(28): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0019others(12): Show | a0001c0001t0001g0143a0001c0001t0001g0154a0001c0001t0001g0182others(28): Show | 31 | 256 | 0.1211 | -1 | c.413 others(9): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 4/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97152458 | GC | G | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00280.hp2 others(120): Show |
a0001a0002a0005others(1): Show | a0001c0001a0001c0002a0001c0003others(13): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(28): Show | a0001c0001t0001g0007a0001c0001t0001g0026a0001c0001t0001g0033others(120): Show | 123 | 256 | 0.4805 | -1 | c.413 others(9): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 4/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97159402 | TC | T | intron_variant | MODIFIER | HG00280.hp1 HG01167.hp1 HG01258.hp1 others(21): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0006a0001c0001t0016others(9): Show | a0001c0001t0001g0007a0001c0001t0001g0041a0001c0001t0001g0048others(21): Show | 24 | 256 | 0.0938 | -1 | c.342 others(9): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 3/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97164283 | AG | A | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp2 others(210): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0003others(24): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(55): Show | a0001c0001t0001g0004a0001c0001t0001g0007a0001c0001t0001g0022others(210): Show | 213 | 256 | 0.8320 | -1 | c.269 others(8): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 2/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97169077 | TA | T | intron_variant | MODIFIER | HG01891.hp1 HG02622.hp2 HG03209.hp2 |
a0001 | a0001c0001a0001c0016 | a0001c0001t0001a0001c0016t0001 | a0001c0001t0001g0160a0001c0001t0001g0161a0001c0016t0001g0159 | 3 | 256 | 0.0117 | -1 | c.198 others(9): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 1/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97173494 | CT | C | intron_variant | MODIFIER | HG02165.hp2 HG02559.hp2 NA18960.hp2 others(2): Show |
a0001a0005 | a0001c0001a0001c0004a0001c0021others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0004t0001others(2): Show | a0001c0001t0001g0246a0001c0001t0002g0008a0001c0004t0001g0173others(2): Show | 5 | 256 | 0.0195 | -1 | c.198 others(9): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 1/36 | chr10 | TogoVar | ||||||
SLIT1_chr10_96993038_97190959 | 97189271 | AG | A | upstream_gene_variant | MODIFIER | HG00408.hp1 HG00621.hp2 HG00642.hp2 others(44): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(15): Show | a0001c0001t0001g0178a0001c0001t0001g0194a0001c0001t0001g0205others(44): Show | 47 | 256 | 0.1836 | -1 | c.-35 others(6): Show |
SLIT1 | ENSG00000187122.17 | transcript | ENST00000266058.9 | protein_coding | 3313 | chr10 | TogoVar | ||||||
SLIT2_chr4_20246905_20625561 | 20249468 | AT | A | upstream_gene_variant | MODIFIER | HG01081.hp2 HG02451.hp2 HG02717.hp1 others(4): Show |
a0001 | a0001c0001a0001c0003a0001c0012others(1): Show | a0001c0001t0004a0001c0001t0017a0001c0001t0023others(3): Show | a0001c0001t0004g0207a0001c0001t0017g0184a0001c0001t0023g0037others(4): Show | 7 | 230 | 0.0304 | -1 | c.-43 others(6): Show |
SLIT2 | ENSG00000145147.20 | transcript | ENST00000504154.6 | protein_coding | 2436 | chr4 | TogoVar | ||||||
SLIT2_chr4_20246905_20625561 | 20263317 | TG | T | intron_variant | MODIFIER | HG00642.hp1 HG00735.hp1 HG00735.hp2 others(24): Show |
a0001a0007 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(12): Show | a0001c0001t0001g0053a0001c0001t0001g0054a0001c0001t0001g0056others(24): Show | 27 | 230 | 0.1174 | -1 | c.323 others(9): Show |
SLIT2 | ENSG00000145147.20 | transcript | ENST00000504154.6 | protein_coding | 3/36 | chr4 | TogoVar | ||||||
SLIT2_chr4_20246905_20625561 | 20271567 | TA | T | intron_variant | MODIFIER | HG00558.hp2 HG02165.hp1 NA18952.hp2 |
a0001 | a0001c0002 | a0001c0002t0001a0001c0002t0002 | a0001c0002t0001g0076a0001c0002t0002g0075a0001c0002t0002g0077 | 3 | 230 | 0.0130 | -1 | c.395 others(9): Show |
SLIT2 | ENSG00000145147.20 | transcript | ENST00000504154.6 | protein_coding | 4/36 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
SLIT2_chr4_20246905_20625561 | 20272285 | AT | A | intron_variant | MODIFIER | HG00609.hp2 HG01106.hp2 HG01167.hp2 others(19): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0012a0001c0001t0026a0001c0001t0027others(14): Show | a0001c0001t0012g0016a0001c0001t0012g0017a0001c0001t0012g0019others(19): Show | 22 | 230 | 0.0957 | -1 | c.395 others(9): Show |
SLIT2 | ENSG00000145147.20 | transcript | ENST00000504154.6 | protein_coding | 4/36 | chr4 | TogoVar |