regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SLX4_chr16_3576181_3616606 | 3596823 | GT | G | intron_variant | MODIFIER | HG02257.hp2 HG02896.hp2 HG02970.hp2 others(4): Show |
a0002a0005 | a0002c0006a0005c0008 | a0002c0006t0001a0005c0008t0006a0005c0008t0018others(1): Show | a0002c0006t0001g0264a0005c0008t0006g0020a0005c0008t0006g0066others(3): Show | 7 | 396 | 0.0177 | -1 | c.168 others(9): Show |
SLX4 | ENSG00000188827.12 | transcript | ENST00000294008.4 | protein_coding | 7/14 | chr16 | TogoVar | ||||||
SLX4_chr16_3576181_3616606 | 3600591 | CT | C | intron_variant | MODIFIER | HG02602.hp2 HG02976.hp1 HG06807.hp2 others(9): Show |
a0001a0013a0020 | a0001c0001a0001c0003a0013c0013others(1): Show | a0001c0001t0001a0001c0003t0001a0013c0013t0016others(1): Show | a0001c0001t0001g0206a0001c0001t0001g0207a0001c0001t0001g0208others(8): Show | 12 | 396 | 0.0303 | -1 | c.116 others(9): Show |
SLX4 | ENSG00000188827.12 | transcript | ENST00000294008.4 | protein_coding | 5/14 | chr16 | TogoVar | ||||||
SLX4_chr16_3576181_3616606 | 3604216 | CA | C | intron_variant | MODIFIER | HG00639.hp1 HG01069.hp1 HG02451.hp1 others(16): Show |
a0001a0002a0003others(6): Show | a0001c0001a0001c0002a0001c0003others(10): Show | a0001c0001t0001a0001c0002t0001a0001c0003t0001others(12): Show | a0001c0001t0001g0215a0001c0002t0001g0153a0001c0002t0001g0154others(15): Show | 19 | 396 | 0.0480 | -1 | c.761 others(9): Show |
SLX4 | ENSG00000188827.12 | transcript | ENST00000294008.4 | protein_coding | 3/14 | chr16 | TogoVar | ||||||
SLX4_chr16_3576181_3616606 | 3604924 | AT | A | intron_variant | MODIFIER | HG00140.hp2 HG00558.hp2 HG00642.hp1 others(60): Show |
a0002a0004a0005others(13): Show | a0002c0005a0002c0059a0004c0007others(15): Show | a0002c0005t0001a0002c0005t0003a0002c0005t0005others(19): Show | a0002c0005t0001g0044a0002c0005t0001g0045a0002c0005t0001g0087others(41): Show | 63 | 396 | 0.1591 | -1 | c.760 others(9): Show |
SLX4 | ENSG00000188827.12 | transcript | ENST00000294008.4 | protein_coding | 3/14 | chr16 | TogoVar | ||||||
SLX4_chr16_3576181_3616606 | 3608099 | TG | T | intron_variant | MODIFIER | HG02257.hp2 HG02970.hp2 HG03130.hp2 others(3): Show |
a0005 | a0005c0008 | a0005c0008t0006a0005c0008t0018a0005c0008t0019 | a0005c0008t0006g0020a0005c0008t0006g0066a0005c0008t0006g0068others(2): Show | 6 | 396 | 0.0152 | -1 | c.535 others(8): Show |
SLX4 | ENSG00000188827.12 | transcript | ENST00000294008.4 | protein_coding | 2/14 | chr16 | TogoVar | ||||||
SLX4_chr16_3576181_3616606 | 3612223 | TG | T | upstream_gene_variant | MODIFIER | HG00140.hp2 HG00558.hp2 HG00741.hp2 others(36): Show |
a0001a0004a0005others(7): Show | a0001c0002a0004c0007a0004c0028others(8): Show | a0001c0002t0001a0004c0007t0002a0004c0028t0002others(11): Show | a0001c0002t0001g0005a0001c0002t0001g0181a0001c0002t0001g0196others(28): Show | 39 | 396 | 0.0985 | -1 | c.-12 others(6): Show |
SLX4 | ENSG00000188827.12 | transcript | ENST00000294008.4 | protein_coding | 618 | chr16 | TogoVar | ||||||
SLX4_chr16_3576181_3616606 | 3613908 | AT | A | upstream_gene_variant | MODIFIER | HG02258.hp2 HG02622.hp1 HG02735.hp1 others(6): Show |
a0001a0002a0003others(3): Show | a0001c0051a0002c0005a0002c0057others(4): Show | a0001c0051t0001a0002c0005t0003a0002c0057t0001others(4): Show | a0001c0051t0001g0074a0002c0005t0003g0003a0002c0057t0001g0285others(5): Show | 9 | 396 | 0.0227 | -1 | c.-29 others(6): Show |
SLX4 | ENSG00000188827.12 | transcript | ENST00000294008.4 | protein_coding | 2303 | chr16 | TogoVar | ||||||
SLX4_chr16_3576181_3616606 | 3615066 | AT | A | upstream_gene_variant | MODIFIER | HG00140.hp2 HG00558.hp2 HG00639.hp1 others(28): Show |
a0001a0002a0003others(5): Show | a0001c0002a0002c0016a0002c0057others(7): Show | a0001c0002t0001a0002c0016t0001a0002c0016t0010others(8): Show | a0001c0002t0001g0005a0001c0002t0001g0181a0001c0002t0001g0196others(22): Show | 31 | 396 | 0.0783 | -1 | c.-41 others(6): Show |
SLX4 | ENSG00000188827.12 | transcript | ENST00000294008.4 | protein_coding | 3461 | chr16 | TogoVar | ||||||
SLX9_chr21_44935029_44981973 | 44938102 | AT | A | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00280.hp2 others(162): Show |
a0001a0005 | a0001c0001a0001c0005a0005c0007 | a0001c0001t0001a0001c0005t0001a0005c0007t0001 | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0005others(106): Show | 165 | 334 | 0.4940 | -1 | c.-19 others(6): Show |
SLX9 | ENSG00000160256.14 | transcript | ENST00000291634.11 | protein_coding | 1926 | chr21 | TogoVar | ||||||
SLX9_chr21_44935029_44981973 | 44939441 | TG | T | upstream_gene_variant | MODIFIER | HG01891.hp1 HG02257.hp1 HG02258.hp2 others(9): Show |
a0003 | a0003c0003 | a0003c0003t0001 | a0003c0003t0001g0029a0003c0003t0001g0047a0003c0003t0001g0052others(8): Show | 12 | 334 | 0.0359 | -1 | c.-61 others(5): Show |
SLX9 | ENSG00000160256.14 | transcript | ENST00000291634.11 | protein_coding | 587 | chr21 | TogoVar | ||||||
SLX9_chr21_44935029_44981973 | 44944474 | TC | T | intron_variant | MODIFIER | HG02451.hp1 HG02486.hp2 HG02723.hp2 others(2): Show |
a0001a0006 | a0001c0001a0006c0006 | a0001c0001t0001a0006c0006t0001 | a0001c0001t0001g0043a0001c0001t0001g0044a0001c0001t0001g0045others(2): Show | 5 | 334 | 0.0150 | -1 | c.283 others(8): Show |
SLX9 | ENSG00000160256.14 | transcript | ENST00000291634.11 | protein_coding | 2/5 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |||||
SLX9_chr21_44935029_44981973 | 44948026 | TG | T | intron_variant | MODIFIER | HG02451.hp1 HG02486.hp2 HG02723.hp2 others(2): Show |
a0001a0006 | a0001c0001a0006c0006 | a0001c0001t0001a0006c0006t0001 | a0001c0001t0001g0043a0001c0001t0001g0044a0001c0001t0001g0045others(2): Show | 5 | 334 | 0.0150 | -1 | c.283 others(9): Show |
SLX9 | ENSG00000160256.14 | transcript | ENST00000291634.11 | protein_coding | 2/5 | chr21 | TogoVar | ||||||
SLX9_chr21_44935029_44981973 | 44950100 | AT | A | intron_variant | MODIFIER | HG00280.hp1 HG00408.hp1 HG00544.hp1 others(52): Show |
a0001a0002a0003others(2): Show | a0001c0001a0002c0002a0003c0003others(2): Show | a0001c0001t0001a0002c0002t0001a0003c0003t0001others(2): Show | a0001c0001t0001g0018a0001c0001t0001g0043a0001c0001t0001g0044others(38): Show | 55 | 334 | 0.1647 | -1 | c.283 others(9): Show |
SLX9 | ENSG00000160256.14 | transcript | ENST00000291634.11 | protein_coding | 2/5 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |||||
SLX9_chr21_44935029_44981973 | 44950236 | CA | C | intron_variant | MODIFIER | HG01109.hp1 HG01167.hp1 HG01884.hp1 others(12): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0003c0003t0001 | a0001c0001t0001g0018a0001c0001t0001g0030a0001c0001t0001g0039others(9): Show | 15 | 334 | 0.0449 | -1 | c.283 others(9): Show |
SLX9 | ENSG00000160256.14 | transcript | ENST00000291634.11 | protein_coding | 2/5 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |||||
SLX9_chr21_44935029_44981973 | 44950297 | AG | A | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(322): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0005a0002c0002others(4): Show | a0001c0001t0001a0001c0005t0001a0002c0002t0001others(4): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0004others(229): Show | 325 | 334 | 0.9731 | -1 | c.283 others(9): Show |
SLX9 | ENSG00000160256.14 | transcript | ENST00000291634.11 | protein_coding | 2/5 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |||||
SLX9_chr21_44935029_44981973 | 44955835 | AT | A | intron_variant | MODIFIER | NA18747.hp1 NA18955.hp1 NA18956.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0089a0001c0001t0001g0090a0001c0001t0001g0091others(4): Show | 7 | 334 | 0.0210 | -1 | c.284 others(9): Show |
SLX9 | ENSG00000160256.14 | transcript | ENST00000291634.11 | protein_coding | 2/5 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |||||
SLX9_chr21_44935029_44981973 | 44955968 | TG | T | intron_variant | MODIFIER | HG00423.hp2 HG00558.hp1 HG00621.hp2 others(28): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0003a0001c0001t0001g0035a0001c0001t0001g0036others(17): Show | 31 | 334 | 0.0928 | -1 | c.284 others(9): Show |
SLX9 | ENSG00000160256.14 | transcript | ENST00000291634.11 | protein_coding | 2/5 | chr21 | TogoVar | ||||||
SLX9_chr21_44935029_44981973 | 44963375 | CT | C | intron_variant | MODIFIER | HG00280.hp1 HG00408.hp1 HG00544.hp1 others(42): Show |
a0002a0003a0004 | a0002c0002a0003c0003a0004c0004 | a0002c0002t0001a0003c0003t0001a0004c0004t0001 | a0002c0002t0001g0002a0002c0002t0001g0204a0002c0002t0001g0205others(29): Show | 45 | 334 | 0.1347 | -1 | c.352 others(9): Show |
SLX9 | ENSG00000160256.14 | transcript | ENST00000291634.11 | protein_coding | 3/5 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |||||
SLX9_chr21_44935029_44981973 | 44969749 | AT | A | intron_variant | MODIFIER | HG01109.hp1 HG01884.hp1 HG02258.hp1 others(6): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0003c0003t0001 | a0001c0001t0001g0018a0001c0001t0001g0030a0001c0001t0001g0143others(4): Show | 9 | 334 | 0.0270 | -1 | c.500 others(9): Show |
SLX9 | ENSG00000160256.14 | transcript | ENST00000291634.11 | protein_coding | 4/5 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |||||
SLX9_chr21_44935029_44981973 | 44969945 | GA | G | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(330): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0005a0002c0002others(4): Show | a0001c0001t0001a0001c0005t0001a0002c0002t0001others(4): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0004others(234): Show | 333 | 334 | 0.9970 | -1 | c.500 others(9): Show |
SLX9 | ENSG00000160256.14 | transcript | ENST00000291634.11 | protein_coding | 4/5 | INFO_REALIGN_3_PRIME | chr21 | TogoVar | |||||
SLX9_chr21_44935029_44981973 | 44970070 | GA | G | intron_variant | MODIFIER | HG01109.hp1 HG01884.hp1 HG02630.hp1 others(4): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0003c0003t0001 | a0001c0001t0001g0030a0001c0001t0001g0143a0001c0001t0001g0185others(3): Show | 7 | 334 | 0.0210 | -1 | c.500 others(9): Show |
SLX9 | ENSG00000160256.14 | transcript | ENST00000291634.11 | protein_coding | 4/5 | chr21 | TogoVar | ||||||
SLX9_chr21_44935029_44981973 | 44971390 | GT | G | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(330): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0005a0002c0002others(4): Show | a0001c0001t0001a0001c0005t0001a0002c0002t0001others(4): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0004others(234): Show | 333 | 334 | 0.9970 | -1 | c.501 others(9): Show |
SLX9 | ENSG00000160256.14 | transcript | ENST00000291634.11 | protein_coding | 4/5 | chr21 | TogoVar | ||||||
SLX9_chr21_44935029_44981973 | 44977448 | CT | C | downstream_gene_variant | MODIFIER | HG01167.hp1 HG02145.hp1 HG02257.hp2 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0030a0001c0001t0001g0039a0001c0001t0001g0048others(10): Show | 15 | 334 | 0.0449 | -1 | c.*64 others(5): Show |
SLX9 | ENSG00000160256.14 | transcript | ENST00000291634.11 | protein_coding | 476 | chr21 | TogoVar | ||||||
SLX9_chr21_44935029_44981973 | 44981588 | CG | C | downstream_gene_variant | MODIFIER | HG02258.hp1 HG02486.hp2 HG02922.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0010a0001c0001t0001g0018a0001c0001t0001g0138others(5): Show | 9 | 334 | 0.0270 | -1 | c.*47 others(6): Show |
SLX9 | ENSG00000160256.14 | transcript | ENST00000291634.11 | protein_coding | 4616 | chr21 | TogoVar | ||||||
SLX9_chr21_44935029_44981973 | 44981701 | CG | C | downstream_gene_variant | MODIFIER | HG00423.hp1 HG01192.hp2 HG01928.hp2 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0003a0001c0001t0001g0019a0001c0001t0001g0032others(9): Show | 15 | 334 | 0.0449 | -1 | c.*48 others(6): Show |
SLX9 | ENSG00000160256.14 | transcript | ENST00000291634.11 | protein_coding | 4729 | chr21 | TogoVar | ||||||
SLX9_chr21_44935029_44981973 | 44981758 | CG | C | downstream_gene_variant | MODIFIER | HG00140.hp2 HG00280.hp2 HG00323.hp2 others(82): Show |
a0001 | a0001c0001a0001c0005 | a0001c0001t0001a0001c0005t0001 | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0004others(59): Show | 85 | 334 | 0.2545 | -1 | c.*49 others(6): Show |
SLX9 | ENSG00000160256.14 | transcript | ENST00000291634.11 | protein_coding | 4786 | chr21 | TogoVar | ||||||
SLX9_chr21_44935029_44981973 | 44981815 | CG | C | downstream_gene_variant | MODIFIER | HG00323.hp1 HG00423.hp2 HG00621.hp2 others(21): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0007others(16): Show | 24 | 334 | 0.0719 | -1 | c.*50 others(6): Show |
SLX9 | ENSG00000160256.14 | transcript | ENST00000291634.11 | protein_coding | 4843 | chr21 | TogoVar | ||||||
SLX9_chr21_44935029_44981973 | 44981872 | CG | C | downstream_gene_variant | MODIFIER | HG01928.hp2 HG01943.hp1 HG01978.hp1 others(23): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0003a0001c0001t0001g0006a0001c0001t0001g0013others(16): Show | 26 | 334 | 0.0778 | -1 | c.*50 others(6): Show |
SLX9 | ENSG00000160256.14 | transcript | ENST00000291634.11 | protein_coding | 4900 | chr21 | TogoVar | ||||||
SLX9_chr21_44935029_44981973 | 44981876 | GC | G | downstream_gene_variant | MODIFIER | HG01192.hp2 HG01981.hp1 HG03942.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0003a0001c0001t0001g0162a0001c0001t0001g0164 | 3 | 334 | 0.0090 | -1 | c.*50 others(6): Show |
SLX9 | ENSG00000160256.14 | transcript | ENST00000291634.11 | protein_coding | 4904 | chr21 | TogoVar | ||||||
SMAD1_chr4_145476853_145564176 | 145477165 | TA | T | upstream_gene_variant | MODIFIER | HG00408.hp1 HG00597.hp2 NA19010.hp1 |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0009 | a0001c0001t0003g0003a0001c0001t0009g0235 | 3 | 308 | 0.0097 | -1 | c.-50 others(6): Show |
SMAD1 | ENSG00000170365.10 | transcript | ENST00000302085.9 | protein_coding | 4687 | chr4 | TogoVar | ||||||
SMAD1_chr4_145476853_145564176 | 145477169 | TA | T | upstream_gene_variant | MODIFIER | HG00621.hp2 HG01099.hp1 HG01255.hp2 others(13): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0006a0001c0001t0009 | a0001c0001t0003g0014a0001c0001t0003g0124a0001c0001t0003g0125others(12): Show | 16 | 308 | 0.0520 | -1 | c.-50 others(6): Show |
SMAD1 | ENSG00000170365.10 | transcript | ENST00000302085.9 | protein_coding | 4683 | chr4 | TogoVar | ||||||
SMAD1_chr4_145476853_145564176 | 145477330 | AT | A | upstream_gene_variant | MODIFIER | HG00438.hp1 HG01192.hp2 HG01243.hp1 others(53): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(14): Show | a0001c0001t0001g0029a0001c0001t0001g0052a0001c0001t0001g0078others(51): Show | 56 | 308 | 0.1818 | -1 | c.-48 others(6): Show |
SMAD1 | ENSG00000170365.10 | transcript | ENST00000302085.9 | protein_coding | 4522 | chr4 | TogoVar | ||||||
SMAD1_chr4_145476853_145564176 | 145477980 | TA | T | upstream_gene_variant | MODIFIER | HG01981.hp2 HG02040.hp1 HG02148.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(2): Show | a0001c0001t0001g0058a0001c0001t0002g0012a0001c0001t0002g0099others(5): Show | 9 | 308 | 0.0292 | -1 | c.-42 others(6): Show |
SMAD1 | ENSG00000170365.10 | transcript | ENST00000302085.9 | protein_coding | 3872 | chr4 | TogoVar | ||||||
SMAD1_chr4_145476853_145564176 | 145477981 | AT | A | upstream_gene_variant | MODIFIER | HG00544.hp1 HG00609.hp2 HG00642.hp2 others(31): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0011a0001c0001t0001g0034a0001c0001t0001g0054others(29): Show | 34 | 308 | 0.1104 | -1 | c.-42 others(6): Show |
SMAD1 | ENSG00000170365.10 | transcript | ENST00000302085.9 | protein_coding | 3871 | chr4 | TogoVar | ||||||
SMAD1_chr4_145476853_145564176 | 145479032 | TG | T | upstream_gene_variant | MODIFIER | HG00438.hp1 HG01884.hp2 HG02040.hp1 others(12): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0005a0001c0002t0012 | a0001c0001t0005g0020a0001c0001t0005g0021a0001c0001t0005g0023others(12): Show | 15 | 308 | 0.0487 | -1 | c.-31 others(6): Show |
SMAD1 | ENSG00000170365.10 | transcript | ENST00000302085.9 | protein_coding | 2820 | chr4 | TogoVar | ||||||
SMAD1_chr4_145476853_145564176 | 145480917 | AT | A | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(136): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(15): Show | a0001c0001t0001g0009a0001c0001t0001g0017a0001c0001t0001g0018others(125): Show | 139 | 308 | 0.4513 | -1 | c.-12 others(6): Show |
SMAD1 | ENSG00000170365.10 | transcript | ENST00000302085.9 | protein_coding | 935 | chr4 | TogoVar | ||||||
SMAD1_chr4_145476853_145564176 | 145482223 | AC | A | intron_variant | MODIFIER | HG00438.hp1 HG01167.hp1 HG01884.hp2 others(34): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(8): Show | a0001c0001t0001g0052a0001c0001t0001g0054a0001c0001t0001g0055others(31): Show | 37 | 308 | 0.1201 | -1 | c.-17 others(9): Show |
SMAD1 | ENSG00000170365.10 | transcript | ENST00000302085.9 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
SMAD1_chr4_145476853_145564176 | 145487881 | AG | A | intron_variant | MODIFIER | HG00438.hp1 HG01192.hp2 HG01243.hp1 others(61): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(14): Show | a0001c0001t0001g0029a0001c0001t0001g0052a0001c0001t0001g0078others(59): Show | 64 | 308 | 0.2078 | -1 | c.-17 others(10): Show |
SMAD1 | ENSG00000170365.10 | transcript | ENST00000302085.9 | protein_coding | 1/6 | chr4 | TogoVar | ||||||
SMAD1_chr4_145476853_145564176 | 145488120 | CT | C | intron_variant | MODIFIER | HG00738.hp2 HG01081.hp2 HG02572.hp2 others(11): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0006a0001c0001t0019others(1): Show | a0001c0001t0004g0053a0001c0001t0004g0079a0001c0001t0004g0080others(11): Show | 14 | 308 | 0.0455 | -1 | c.-17 others(10): Show |
SMAD1 | ENSG00000170365.10 | transcript | ENST00000302085.9 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
SMAD1_chr4_145476853_145564176 | 145488556 | CT | C | intron_variant | MODIFIER | HG00438.hp1 HG01192.hp2 HG01243.hp1 others(61): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(14): Show | a0001c0001t0001g0029a0001c0001t0001g0052a0001c0001t0001g0078others(59): Show | 64 | 308 | 0.2078 | -1 | c.-17 others(10): Show |
SMAD1 | ENSG00000170365.10 | transcript | ENST00000302085.9 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
SMAD1_chr4_145476853_145564176 | 145490231 | CA | C | intron_variant | MODIFIER | HG00423.hp2 HG00621.hp1 HG01081.hp1 others(42): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0013others(5): Show | a0001c0001t0001g0052a0001c0001t0001g0078a0001c0001t0001g0122others(40): Show | 45 | 308 | 0.1461 | -1 | c.-17 others(10): Show |
SMAD1 | ENSG00000170365.10 | transcript | ENST00000302085.9 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
SMAD1_chr4_145476853_145564176 | 145492012 | TA | T | intron_variant | MODIFIER | HG01884.hp1 HG02109.hp2 HG02145.hp2 others(7): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0011a0001c0001t0014a0001c0002t0033others(1): Show | a0001c0001t0011g0040a0001c0001t0011g0041a0001c0001t0011g0073others(7): Show | 10 | 308 | 0.0325 | -1 | c.-17 others(10): Show |
SMAD1 | ENSG00000170365.10 | transcript | ENST00000302085.9 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
SMAD1_chr4_145476853_145564176 | 145494128 | GT | G | intron_variant | MODIFIER | HG00438.hp1 HG01243.hp1 HG01243.hp2 others(30): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(2): Show | a0001c0001t0001g0029a0001c0001t0001g0146a0001c0001t0004g0149others(29): Show | 33 | 308 | 0.1071 | -1 | c.-17 others(11): Show |
SMAD1 | ENSG00000170365.10 | transcript | ENST00000302085.9 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
SMAD1_chr4_145476853_145564176 | 145501641 | CT | C | intron_variant | MODIFIER | HG00423.hp2 HG00438.hp1 HG00621.hp1 others(92): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(15): Show | a0001c0001t0001g0052a0001c0001t0001g0122a0001c0001t0001g0138others(87): Show | 95 | 308 | 0.3084 | -1 | c.-17 others(11): Show |
SMAD1 | ENSG00000170365.10 | transcript | ENST00000302085.9 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
SMAD1_chr4_145476853_145564176 | 145501721 | CT | C | intron_variant | MODIFIER | HG00099.hp1 HG00408.hp1 HG00438.hp2 others(56): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(9): Show | a0001c0001t0001g0249a0001c0001t0003g0003a0001c0001t0003g0004others(50): Show | 59 | 308 | 0.1916 | -1 | c.-17 others(11): Show |
SMAD1 | ENSG00000170365.10 | transcript | ENST00000302085.9 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
SMAD1_chr4_145476853_145564176 | 145505616 | CA | C | intron_variant | MODIFIER | HG00423.hp2 HG00438.hp1 HG01243.hp1 others(38): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(3): Show | a0001c0001t0001g0210a0001c0001t0004g0006a0001c0001t0004g0109others(36): Show | 41 | 308 | 0.1331 | -1 | c.-17 others(10): Show |
SMAD1 | ENSG00000170365.10 | transcript | ENST00000302085.9 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
SMAD1_chr4_145476853_145564176 | 145508080 | AT | A | intron_variant | MODIFIER | HG00099.hp1 HG00408.hp1 HG00438.hp2 others(56): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(11): Show | a0001c0001t0001g0249a0001c0001t0001g0270a0001c0001t0003g0003others(51): Show | 59 | 308 | 0.1916 | -1 | c.-17 others(10): Show |
SMAD1 | ENSG00000170365.10 | transcript | ENST00000302085.9 | protein_coding | 1/6 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
SMAD1_chr4_145476853_145564176 | 145518501 | AT | A | intron_variant | MODIFIER | HG00423.hp2 HG00438.hp1 HG00621.hp1 others(83): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(11): Show | a0001c0001t0001g0052a0001c0001t0001g0078a0001c0001t0001g0093others(80): Show | 86 | 308 | 0.2792 | -1 | c.400 others(9): Show |
SMAD1 | ENSG00000170365.10 | transcript | ENST00000302085.9 | protein_coding | 2/6 | chr4 | TogoVar | ||||||
SMAD1_chr4_145476853_145564176 | 145519088 | CT | C | intron_variant | MODIFIER | HG01070.hp1 HG01167.hp1 HG01255.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0007others(3): Show | a0001c0001t0001g0216a0001c0001t0001g0271a0001c0001t0002g0063others(6): Show | 9 | 308 | 0.0292 | -1 | c.400 others(9): Show |
SMAD1 | ENSG00000170365.10 | transcript | ENST00000302085.9 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |||||
SMAD1_chr4_145476853_145564176 | 145519489 | AT | A | intron_variant | MODIFIER | HG01070.hp1 HG01071.hp1 HG01106.hp2 others(7): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0107a0001c0001t0001g0208a0001c0001t0001g0215others(7): Show | 10 | 308 | 0.0325 | -1 | c.400 others(9): Show |
SMAD1 | ENSG00000170365.10 | transcript | ENST00000302085.9 | protein_coding | 2/6 | INFO_REALIGN_3_PRIME | chr4 | TogoVar |