Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff genename

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Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SMPX_chrX_21700978_21763116	21746650	GT GT	G G	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00609.hp1 HG00621.hp1 others(110): Show HG00438.hp1 HG00609.hp1 HG00621.hp1 HG00639.hp1 HG00673.hp1 HG01081.hp1 HG01081.hp2 HG01106.hp1 HG01123.hp1 HG01169.hp2 HG01243.hp1 HG01255.hp1 HG01258.hp1 HG01361.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01517.hp1 HG01884.hp2 HG01891.hp1 HG01934.hp1 HG01943.hp1 HG02004.hp1 HG02027.hp1 HG02056.hp1 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02132.hp1 HG02145.hp1 HG02155.hp1 HG02257.hp2 HG02258.hp1 HG02293.hp1 HG02451.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02622.hp1 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02897.hp2 HG02965.hp1 HG02970.hp1 HG03239.hp1 HG03453.hp2 HG03490.hp1 HG03540.hp2 HG03704.hp1 HG03831.hp2 HG03834.hp1 HG03942.hp1 HG04115.hp1 HG04184.hp2 HG04199.hp1 HG04228.hp1 HG06807.hp2 NA18747.hp1 NA18939.hp2 NA18940.hp1 NA18943.hp1 NA18944.hp1 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18950.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp2 NA18960.hp1 NA18961.hp1 NA18964.hp2 NA18969.hp1 NA18971.hp1 NA18977.hp1 NA18982.hp1 NA18984.hp1 NA18988.hp1 NA18989.hp1 NA18991.hp2 NA18995.hp1 NA18997.hp2 NA19000.hp1 NA19001.hp1 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19006.hp1 NA19007.hp1 NA19009.hp1 NA19011.hp2 NA19012.hp1 NA19030.hp1 NA19030.hp2 NA19056.hp1 NA19062.hp1 NA19066.hp1 NA19067.hp1 NA19074.hp2 NA19077.hp2 NA19079.hp1 NA19081.hp2 NA19082.hp1 NA19084.hp1 NA19086.hp1 NA19088.hp1 NA19091.hp1 NA19240.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0001t0001 a0001c0001t0002 a0001c0002t0001	a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0007 others(98): Show a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0016 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0030 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0143 a0001c0001t0001g0152 a0001c0001t0001g0158 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0171 a0001c0001t0001g0182 a0001c0001t0001g0260 a0001c0001t0002g0020 a0001c0002t0001g0065	113	289	0.3910	-1	c.46- others(8): Show c.46-2815delA	SMPX	ENSG00000091482.8	transcript	ENST00000379494.4	protein_coding	2/4			chrX	TogoVar
SMPX_chrX_21700978_21763116	21747498	TC TC	T T	intron_variant intron_variant	MODIFIER	NA19076.hp1 NA19076.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0047 a0001c0001t0001g0047	1	289	0.0035	-1	c.46- others(8): Show c.46-3663delG	SMPX	ENSG00000091482.8	transcript	ENST00000379494.4	protein_coding	2/4			chrX	TogoVar
SMPX_chrX_21700978_21763116	21747587	AC AC	A A	intron_variant intron_variant	MODIFIER	NA19076.hp1 NA19076.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0047 a0001c0001t0001g0047	1	289	0.0035	-1	c.46- others(8): Show c.46-3752delG	SMPX	ENSG00000091482.8	transcript	ENST00000379494.4	protein_coding	2/4			chrX	TogoVar
SMPX_chrX_21700978_21763116	21747696	TC TC	T T	intron_variant intron_variant	MODIFIER	NA19076.hp1 NA19076.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0047 a0001c0001t0001g0047	1	289	0.0035	-1	c.46- others(8): Show c.46-3861delG	SMPX	ENSG00000091482.8	transcript	ENST00000379494.4	protein_coding	2/4			chrX	TogoVar
SMPX_chrX_21700978_21763116	21761267	AC AC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01243.hp1 HG01243.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0182 a0001c0001t0001g0182	1	289	0.0035	-1	c.-33 others(6): Show c.-3339delG	SMPX	ENSG00000091482.8	transcript	ENST00000379494.4	protein_coding		3152		chrX	TogoVar
SMPX_chrX_21700978_21763116	21761674	TC TC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19006.hp1 NA19006.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0063 a0001c0001t0001g0063	1	289	0.0035	-1	c.-37 others(6): Show c.-3746delG	SMPX	ENSG00000091482.8	transcript	ENST00000379494.4	protein_coding		3559		chrX	TogoVar
SMPX_chrX_21700978_21763116	21762316	AG AG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19006.hp1 NA19006.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0063 a0001c0001t0001g0063	1	289	0.0035	-1	c.-43 others(6): Show c.-4388delC	SMPX	ENSG00000091482.8	transcript	ENST00000379494.4	protein_coding		4201		chrX	TogoVar
SMPX_chrX_21700978_21763116	21762887	TA TA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19006.hp1 NA19006.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0063 a0001c0001t0001g0063	1	289	0.0035	-1	c.-49 others(6): Show c.-4959delT	SMPX	ENSG00000091482.8	transcript	ENST00000379494.4	protein_coding		4772		chrX	TogoVar
SMPX_chrX_21700978_21763116	21763063	GA GA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19006.hp1 NA19006.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0063 a0001c0001t0001g0063	1	289	0.0035	-1	c.-51 others(6): Show c.-5135delT	SMPX	ENSG00000091482.8	transcript	ENST00000379494.4	protein_coding		4948		chrX	TogoVar
SMR3A_chr4_70355760_70372158	70358258	GA GA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp2 others(185): Show HG00099.hp1 HG00099.hp2 HG00140.hp2 HG00408.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp2 HG00558.hp1 HG00597.hp1 HG00621.hp1 HG00639.hp1 HG00642.hp2 HG00673.hp2 HG00733.hp1 HG00735.hp1 HG00735.hp2 HG00741.hp1 HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01099.hp2 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01243.hp2 HG01256.hp2 HG01257.hp2 HG01258.hp2 HG01261.hp1 HG01346.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01496.hp1 HG01928.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp2 HG01975.hp1 HG01993.hp2 HG02015.hp2 HG02027.hp1 HG02055.hp1 HG02071.hp1 HG02083.hp2 HG02129.hp2 HG02148.hp1 HG02155.hp1 HG02257.hp1 HG02257.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02523.hp2 HG02559.hp1 HG02572.hp1 HG02622.hp2 HG02630.hp1 HG02647.hp2 HG02698.hp1 HG02717.hp2 HG02895.hp1 HG02965.hp2 HG02970.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03098.hp1 HG03139.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03490.hp2 HG03491.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03688.hp1 HG03688.hp2 HG03704.hp2 HG03710.hp1 HG03831.hp2 HG03927.hp2 HG04115.hp1 HG04184.hp2 HG04199.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp2 NA18612.hp2 NA18747.hp1 NA18939.hp2 NA18941.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18948.hp1 NA18953.hp1 NA18955.hp1 NA18956.hp1 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18961.hp2 NA18962.hp2 NA18964.hp1 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp2 NA18969.hp1 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18972.hp2 NA18974.hp2 NA18975.hp1 NA18977.hp1 NA18978.hp1 NA18979.hp1 NA18981.hp1 NA18982.hp2 NA18984.hp2 NA18986.hp1 NA18986.hp2 NA18989.hp2 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA18997.hp2 NA18998.hp1 NA19000.hp2 NA19001.hp2 NA19003.hp1 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19010.hp2 NA19011.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp2 NA19064.hp1 NA19065.hp1 NA19065.hp2 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19074.hp2 NA19076.hp1 NA19077.hp2 NA19078.hp2 NA19079.hp1 NA19080.hp2 NA19081.hp1 NA19082.hp1 NA19082.hp2 NA19084.hp2 NA19085.hp2 NA19086.hp1 NA19240.hp2 NA20129.hp1 NA20752.hp2 NA20805.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0003 a0001c0005 others(2): Show a0001c0001 a0001c0003 a0001c0005 a0002c0002 a0004c0010	a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 others(4): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 a0001c0003t0003 a0001c0005t0001 a0002c0002t0002 a0004c0010t0001	a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 others(23): Show a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0015 a0001c0001t0001g0019 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0005g0001 a0001c0001t0006g0045 a0001c0003t0003g0007 a0001c0003t0003g0011 a0001c0003t0003g0016 a0001c0005t0001g0001 a0001c0005t0001g0033 a0002c0002t0002g0003 a0002c0002t0002g0017 a0002c0002t0002g0039 a0004c0010t0001g0001	188	458	0.4105	-1	c.-25 others(6): Show c.-2598delA	SMR3A	ENSG00000109208.5	transcript	ENST00000226460.5	protein_coding		2501		chr4	TogoVar
SMR3A_chr4_70355760_70372158	70360354	CA CA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00408.hp1 others(106): Show HG00099.hp2 HG00140.hp2 HG00408.hp1 HG00438.hp1 HG00544.hp2 HG00558.hp1 HG00639.hp1 HG00733.hp1 HG00735.hp2 HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01099.hp2 HG01123.hp2 HG01168.hp1 HG01175.hp2 HG01192.hp1 HG01243.hp2 HG01256.hp2 HG01257.hp2 HG01258.hp2 HG01346.hp1 HG01358.hp2 HG01361.hp2 HG01496.hp1 HG01928.hp2 HG01934.hp1 HG01943.hp1 HG01952.hp2 HG01975.hp1 HG01993.hp2 HG02055.hp1 HG02129.hp2 HG02148.hp1 HG02257.hp1 HG02257.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp2 HG02451.hp1 HG02572.hp1 HG02698.hp1 HG02717.hp2 HG03017.hp2 HG03453.hp1 HG03490.hp2 HG03491.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03654.hp1 HG03669.hp1 HG03688.hp2 HG03704.hp2 HG03927.hp2 HG04184.hp2 HG04204.hp2 HG04228.hp1 HG04228.hp2 NA18612.hp2 NA18944.hp1 NA18946.hp1 NA18947.hp2 NA18955.hp1 NA18956.hp1 NA18957.hp2 NA18959.hp1 NA18962.hp2 NA18964.hp1 NA18967.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18972.hp2 NA18975.hp1 NA18978.hp1 NA18979.hp1 NA18981.hp1 NA18985.hp2 NA18986.hp2 NA18989.hp2 NA18990.hp1 NA18992.hp1 NA18997.hp2 NA18998.hp1 NA19001.hp2 NA19003.hp1 NA19005.hp1 NA19005.hp2 NA19007.hp2 NA19010.hp2 NA19011.hp1 NA19056.hp2 NA19057.hp2 NA19062.hp1 NA19062.hp2 NA19065.hp2 NA19067.hp2 NA19074.hp2 NA19076.hp2 NA19077.hp2 NA19080.hp2 NA19081.hp1 NA19082.hp2 NA19084.hp2 NA19091.hp1 NA20752.hp2 NA20805.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0001c0005 a0004c0010 a0001c0001 a0001c0005 a0004c0010	a0001c0001t0001 a0001c0001t0005 a0001c0005t0001 others(1): Show a0001c0001t0001 a0001c0001t0005 a0001c0005t0001 a0004c0010t0001	a0001c0001t0001g0001 a0001c0001t0001g0012 a0001c0001t0001g0019 others(7): Show a0001c0001t0001g0001 a0001c0001t0001g0012 a0001c0001t0001g0019 a0001c0001t0001g0023 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0005g0001 a0001c0005t0001g0001 a0001c0005t0001g0033 a0004c0010t0001g0001	109	458	0.2380	-1	c.-50 others(5): Show c.-502delA	SMR3A	ENSG00000109208.5	transcript	ENST00000226460.5	protein_coding		405		chr4	TogoVar
SMR3A_chr4_70355760_70372158	70366315	AT AT	A A	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(436): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp2 HG01255.hp1 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01496.hp1 HG01496.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01975.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02083.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp1 HG02132.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02155.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02572.hp1 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02698.hp1 HG02698.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02735.hp1 HG02735.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp2 HG03490.hp1 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp1 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18959.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18967.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18972.hp1 NA18972.hp2 NA18973.hp1 NA18973.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18977.hp2 NA18978.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18987.hp1 NA18987.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18991.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18995.hp2 NA18997.hp1 NA18997.hp2 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19001.hp1 NA19001.hp2 NA19003.hp1 NA19003.hp2 NA19004.hp1 NA19004.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19056.hp1 NA19056.hp2 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19059.hp1 NA19059.hp2 NA19060.hp1 NA19060.hp2 NA19062.hp1 NA19062.hp2 NA19063.hp1 NA19063.hp2 NA19064.hp1 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19067.hp1 NA19067.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19074.hp2 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19078.hp1 NA19078.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19082.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp1 NA19085.hp2 NA19086.hp1 NA19086.hp2 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA19091.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA21309.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0004 others(3): Show a0001 a0002 a0004 a0005 a0006 a0007	a0001c0001 a0001c0003 a0001c0005 others(6): Show a0001c0001 a0001c0003 a0001c0005 a0002c0002 a0002c0008 a0004c0010 a0005c0006 a0006c0009 a0007c0007	a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 others(9): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 a0001c0003t0003 a0001c0003t0004 a0001c0005t0001 a0002c0002t0002 a0002c0008t0002 a0004c0010t0001 a0005c0006t0003 a0006c0009t0001 a0007c0007t0002	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(49): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0041 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0005g0001 a0001c0001t0006g0045 a0001c0003t0003g0007 a0001c0003t0003g0010 a0001c0003t0003g0011 a0001c0003t0003g0014 a0001c0003t0003g0016 a0001c0003t0003g0030 a0001c0003t0003g0031 a0001c0003t0003g0032 a0001c0003t0004g0007 a0001c0005t0001g0001 a0001c0005t0001g0033 a0002c0002t0002g0003 a0002c0002t0002g0005 a0002c0002t0002g0008 a0002c0002t0002g0009 a0002c0002t0002g0017 a0002c0002t0002g0020 a0002c0002t0002g0021 a0002c0002t0002g0026 a0002c0002t0002g0027 a0002c0002t0002g0034 a0002c0002t0002g0035 a0002c0002t0002g0038 a0002c0002t0002g0039 a0002c0002t0002g0042 a0002c0008t0002g0008 a0004c0010t0001g0001 a0005c0006t0003g0007 a0006c0009t0001g0005 a0007c0007t0002g0003	439	458	0.9585	-1	c.55- others(7): Show c.55-321delT	SMR3A	ENSG00000109208.5	transcript	ENST00000226460.5	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr4	TogoVar
SMR3A_chr4_70355760_70372158	70366400	CA CA	C C	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01891.hp2 HG02451.hp2 others(4): Show HG01884.hp2 HG01891.hp2 HG02451.hp2 HG02622.hp2 HG02647.hp1 HG03579.hp2 NA19030.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0011 a0001c0003t0003g0011	7	458	0.0153	-1	c.55- others(7): Show c.55-243delA	SMR3A	ENSG00000109208.5	transcript	ENST00000226460.5	protein_coding	2/2			chr4	TogoVar
SMR3A_chr4_70355760_70372158	70371238	CA CA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp1 HG00280.hp2 HG00323.hp1 others(130): Show HG00140.hp1 HG00280.hp2 HG00323.hp1 HG00408.hp2 HG00423.hp1 HG00597.hp2 HG00609.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp2 HG00738.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp2 HG01255.hp1 HG01256.hp1 HG01258.hp1 HG01261.hp2 HG01346.hp2 HG01496.hp2 HG01517.hp1 HG01934.hp2 HG01943.hp2 HG01975.hp2 HG01993.hp1 HG02015.hp1 HG02027.hp2 HG02056.hp1 HG02056.hp2 HG02071.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02109.hp1 HG02129.hp1 HG02132.hp1 HG02135.hp2 HG02155.hp2 HG02602.hp1 HG02602.hp2 HG02630.hp2 HG02698.hp2 HG02723.hp1 HG02735.hp2 HG02895.hp1 HG02970.hp2 HG03041.hp1 HG03098.hp1 HG03209.hp1 HG03471.hp1 HG03471.hp2 HG03490.hp1 HG03491.hp2 HG03492.hp1 HG03654.hp2 HG03704.hp1 HG03710.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG04115.hp2 HG04184.hp1 HG04204.hp1 NA18612.hp1 NA18747.hp2 NA18941.hp1 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18943.hp2 NA18945.hp1 NA18947.hp1 NA18948.hp1 NA18949.hp1 NA18949.hp2 NA18952.hp2 NA18953.hp2 NA18954.hp1 NA18954.hp2 NA18956.hp2 NA18959.hp2 NA18960.hp2 NA18965.hp1 NA18969.hp2 NA18971.hp1 NA18973.hp2 NA18974.hp1 NA18975.hp2 NA18978.hp2 NA18979.hp2 NA18982.hp1 NA18983.hp1 NA18983.hp2 NA18987.hp2 NA18989.hp1 NA18991.hp1 NA18994.hp1 NA18994.hp2 NA18995.hp2 NA18997.hp1 NA18998.hp2 NA18999.hp2 NA19001.hp1 NA19004.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19011.hp2 NA19012.hp1 NA19054.hp2 NA19056.hp1 NA19058.hp1 NA19058.hp2 NA19059.hp1 NA19059.hp2 NA19060.hp1 NA19060.hp2 NA19064.hp2 NA19074.hp1 NA19078.hp1 NA19079.hp2 NA19080.hp1 NA19084.hp1 NA19085.hp1 NA19086.hp2 NA19088.hp2 NA19090.hp1 NA19091.hp2 NA19240.hp2 NA20752.hp1 NA20805.hp2	a0002 a0007 a0002 a0007	a0002c0002 a0002c0008 a0007c0007 a0002c0002 a0002c0008 a0007c0007	a0002c0002t0002 a0002c0008t0002 a0007c0007t0002 a0002c0002t0002 a0002c0008t0002 a0007c0007t0002	a0002c0002t0002g0003 a0002c0002t0002g0005 a0002c0002t0002g0008 others(13): Show a0002c0002t0002g0003 a0002c0002t0002g0005 a0002c0002t0002g0008 a0002c0002t0002g0009 a0002c0002t0002g0017 a0002c0002t0002g0020 a0002c0002t0002g0021 a0002c0002t0002g0026 a0002c0002t0002g0027 a0002c0002t0002g0034 a0002c0002t0002g0035 a0002c0002t0002g0038 a0002c0002t0002g0039 a0002c0002t0002g0042 a0002c0008t0002g0008 a0007c0007t0002g0003	133	458	0.2904	-1	c.42 others(6): Show c.4245delA	SMR3A	ENSG00000109208.5	transcript	ENST00000226460.5	protein_coding		4081		chr4	TogoVar
SMR3B_chr4_70378131_70395244	70380154	CT CT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02280.hp2 HG02630.hp2 HG02976.hp1 others(2): Show HG02280.hp2 HG02630.hp2 HG02976.hp1 HG03139.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0013 a0001c0001t0001g0053 a0001c0001t0001g0013 a0001c0001t0001g0053	5	462	0.0108	-1	c.-30 others(6): Show c.-3072delT	SMR3B	ENSG00000171201.12	transcript	ENST00000304915.8	protein_coding		2976		chr4	TogoVar
SMR3B_chr4_70378131_70395244	70380290	AC AC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp2 HG00323.hp2 HG00558.hp1 others(74): Show HG00280.hp2 HG00323.hp2 HG00558.hp1 HG00609.hp2 HG00621.hp2 HG00639.hp2 HG01070.hp1 HG01081.hp1 HG01081.hp2 HG01123.hp1 HG01255.hp2 HG01257.hp2 HG01358.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp2 HG01928.hp2 HG01952.hp2 HG02004.hp1 HG02055.hp2 HG02132.hp2 HG02135.hp1 HG02145.hp1 HG02148.hp1 HG02258.hp1 HG02615.hp2 HG02735.hp2 HG02809.hp2 HG02818.hp1 HG02976.hp2 HG03098.hp2 HG03130.hp1 HG03195.hp1 HG03209.hp1 HG03225.hp2 HG03486.hp1 HG03579.hp1 HG03669.hp1 HG03831.hp2 HG04199.hp2 HG06807.hp1 NA18906.hp2 NA18939.hp2 NA18945.hp2 NA18948.hp1 NA18952.hp2 NA18955.hp1 NA18960.hp2 NA18961.hp1 NA18962.hp2 NA18964.hp1 NA18967.hp1 NA18972.hp1 NA18973.hp1 NA18977.hp2 NA18981.hp2 NA18984.hp1 NA18985.hp2 NA18991.hp1 NA18992.hp1 NA18993.hp1 NA18993.hp2 NA18999.hp1 NA19000.hp2 NA19002.hp1 NA19003.hp1 NA19004.hp2 NA19012.hp2 NA19054.hp1 NA19063.hp2 NA19067.hp2 NA19070.hp2 NA19077.hp1 NA19081.hp2 NA19088.hp2 NA19089.hp2 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0003 a0001c0001t0001g0011 a0001c0001t0001g0028 others(16): Show a0001c0001t0001g0003 a0001c0001t0001g0011 a0001c0001t0001g0028 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0002t0001g0003	77	462	0.1667	-1	c.-29 others(6): Show c.-2936delC	SMR3B	ENSG00000171201.12	transcript	ENST00000304915.8	protein_coding		2840		chr4	TogoVar
SMR3B_chr4_70378131_70395244	70385398	GT GT	G G	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp2 others(279): Show HG00099.hp1 HG00099.hp2 HG00140.hp2 HG00280.hp2 HG00323.hp2 HG00408.hp1 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00609.hp2 HG00621.hp2 HG00639.hp1 HG00639.hp2 HG00642.hp2 HG00673.hp1 HG00733.hp1 HG00735.hp2 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01099.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp2 HG01255.hp2 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01433.hp2 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01934.hp2 HG01943.hp2 HG01952.hp1 HG01952.hp2 HG01975.hp1 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG02004.hp1 HG02004.hp2 HG02015.hp2 HG02027.hp2 HG02055.hp1 HG02055.hp2 HG02056.hp2 HG02071.hp1 HG02071.hp2 HG02083.hp2 HG02129.hp1 HG02132.hp2 HG02135.hp1 HG02148.hp1 HG02148.hp2 HG02155.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02258.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp2 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02647.hp2 HG02717.hp2 HG02723.hp2 HG02735.hp2 HG02738.hp2 HG02809.hp2 HG02886.hp2 HG02897.hp1 HG02965.hp2 HG02970.hp1 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03098.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp1 HG03209.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03491.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG03704.hp1 HG03710.hp1 HG03831.hp1 HG03831.hp2 HG03927.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04228.hp2 NA18612.hp1 NA18747.hp2 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18941.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp2 NA18948.hp1 NA18952.hp2 NA18953.hp2 NA18955.hp1 NA18955.hp2 NA18956.hp1 NA18956.hp2 NA18957.hp1 NA18959.hp2 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18967.hp1 NA18967.hp2 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18972.hp2 NA18973.hp1 NA18974.hp1 NA18975.hp1 NA18977.hp1 NA18977.hp2 NA18978.hp2 NA18979.hp1 NA18981.hp1 NA18981.hp2 NA18982.hp2 NA18984.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18986.hp1 NA18986.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18991.hp1 NA18992.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18997.hp2 NA18998.hp2 NA18999.hp1 NA19000.hp2 NA19001.hp2 NA19002.hp1 NA19003.hp1 NA19003.hp2 NA19004.hp2 NA19007.hp1 NA19007.hp2 NA19010.hp1 NA19011.hp2 NA19012.hp2 NA19030.hp2 NA19043.hp1 NA19054.hp1 NA19056.hp1 NA19057.hp1 NA19057.hp2 NA19063.hp1 NA19063.hp2 NA19065.hp1 NA19065.hp2 NA19067.hp1 NA19067.hp2 NA19070.hp1 NA19070.hp2 NA19074.hp1 NA19076.hp1 NA19076.hp2 NA19077.hp1 NA19077.hp2 NA19078.hp2 NA19079.hp1 NA19079.hp2 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19082.hp2 NA19083.hp1 NA19083.hp2 NA19084.hp1 NA19085.hp2 NA19086.hp2 NA19088.hp2 NA19089.hp2 NA19090.hp1 NA19091.hp1 NA20129.hp2 NA20300.hp2 NA20752.hp2 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0010 a0001c0002t0001	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 others(52): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0017 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0028 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0051 a0001c0001t0001g0053 a0001c0001t0001g0056 a0001c0001t0001g0058 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0002g0019 a0001c0001t0002g0020 a0001c0001t0002g0075 a0001c0001t0002g0078 a0001c0001t0003g0009 a0001c0001t0003g0045 a0001c0001t0004g0008 a0001c0001t0004g0057 a0001c0001t0005g0022 a0001c0001t0005g0046 a0001c0001t0006g0019 a0001c0001t0007g0042 a0001c0001t0007g0043 a0001c0001t0007g0044 a0001c0001t0009g0030 a0001c0001t0010g0001 a0001c0002t0001g0003	282	462	0.6104	-1	c.54+ others(7): Show c.54+857delT	SMR3B	ENSG00000171201.12	transcript	ENST00000304915.8	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr4	TogoVar
SMR3B_chr4_70378131_70395244	70385637	CT CT	C C	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01167.hp1 HG01884.hp2 others(14): Show HG01109.hp2 HG01167.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG02145.hp2 HG02258.hp2 HG02451.hp2 HG02486.hp1 HG02622.hp1 HG02647.hp2 HG02809.hp1 HG02896.hp2 HG02897.hp1 HG03195.hp2 HG03579.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0015 a0001c0001t0001g0054 a0001c0001t0001g0056 others(4): Show a0001c0001t0001g0015 a0001c0001t0001g0054 a0001c0001t0001g0056 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0004g0008 a0001c0001t0004g0057	17	462	0.0368	-1	c.54+ others(8): Show c.54+1074delT	SMR3B	ENSG00000171201.12	transcript	ENST00000304915.8	protein_coding	2/2			chr4	TogoVar
SMR3B_chr4_70378131_70395244	70387647	CA CA	C C	intron_variant intron_variant	MODIFIER	HG03669.hp1 HG03831.hp2 HG04199.hp2 HG03669.hp1 HG03831.hp2 HG04199.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0084 a0001c0001t0001g0090 a0001c0001t0001g0093 a0001c0001t0001g0084 a0001c0001t0001g0090 a0001c0001t0001g0093	3	462	0.0065	-1	c.55- others(8): Show c.55-2015delA	SMR3B	ENSG00000171201.12	transcript	ENST00000304915.8	protein_coding	2/2			chr4	TogoVar
SMR3B_chr4_70378131_70395244	70389568	GC GC	G G	intron_variant intron_variant	MODIFIER	NA18969.hp2 NA19000.hp1 NA19007.hp2 others(2): Show NA18969.hp2 NA19000.hp1 NA19007.hp2 NA19063.hp1 NA19070.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0017 a0001c0001t0001g0067 a0001c0001t0001g0017 a0001c0001t0001g0067	5	462	0.0108	-1	c.55- others(6): Show c.55-93delC	SMR3B	ENSG00000171201.12	transcript	ENST00000304915.8	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr4	TogoVar
SMR3B_chr4_70378131_70395244	70391141	GA GA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02630.hp1 HG02723.hp1 HG03209.hp2 HG02630.hp1 HG02723.hp1 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0038 a0001c0001t0002g0077 a0001c0001t0002g0038 a0001c0001t0002g0077	3	462	0.0065	-1	c.12 others(6): Show c.1294delA	SMR3B	ENSG00000171201.12	transcript	ENST00000304915.8	protein_coding		898		chr4	TogoVar
SMR3B_chr4_70378131_70395244	70393686	TG TG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00738.hp2 HG01099.hp1 HG02723.hp2 others(3): Show HG00738.hp2 HG01099.hp1 HG02723.hp2 HG03486.hp2 NA20300.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0009 a0001c0001t0003g0045 a0001c0001t0003g0009 a0001c0001t0003g0045	6	462	0.0130	-1	c.38 others(6): Show c.3839delG	SMR3B	ENSG00000171201.12	transcript	ENST00000304915.8	protein_coding		3443		chr4	TogoVar
SMS_chrX_21935709_21999837	21935827	TG TG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18999.hp2 NA18999.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0279 a0001c0001t0005g0279	1	298	0.0034	-1	c.-49 others(6): Show c.-4997delG	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding		4881		chrX	TogoVar
SMS_chrX_21935709_21999837	21936225	CA CA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19060.hp1 NA19060.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0280 a0001c0001t0005g0280	1	298	0.0034	-1	c.-45 others(6): Show c.-4599delA	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding		4483		chrX	TogoVar
SMS_chrX_21935709_21999837	21936295	CT CT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp1 HG00323.hp1 HG00741.hp1 others(58): Show HG00140.hp1 HG00323.hp1 HG00741.hp1 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01884.hp1 HG02055.hp1 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02280.hp1 HG02293.hp1 HG02451.hp2 HG02486.hp1 HG02572.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02717.hp1 HG02723.hp2 HG02809.hp2 HG02886.hp1 HG02895.hp1 HG02897.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp2 HG03492.hp1 HG03579.hp1 HG03831.hp1 HG03831.hp2 HG03927.hp1 HG04199.hp1 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18906.hp1 NA19043.hp1 NA19240.hp1 NA19240.hp2 NA20300.hp2 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0002t0003	a0001c0001t0001g0145 a0001c0001t0002g0007 a0001c0001t0002g0010 others(58): Show a0001c0001t0001g0145 a0001c0001t0002g0007 a0001c0001t0002g0010 a0001c0001t0002g0116 a0001c0001t0002g0123 a0001c0001t0002g0126 a0001c0001t0002g0127 a0001c0001t0002g0129 a0001c0001t0002g0130 a0001c0001t0002g0131 a0001c0001t0002g0135 a0001c0001t0002g0136 a0001c0001t0002g0138 a0001c0001t0002g0146 a0001c0001t0002g0151 a0001c0001t0002g0153 a0001c0001t0002g0155 a0001c0001t0002g0156 a0001c0001t0002g0160 a0001c0001t0002g0161 a0001c0001t0002g0166 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0287 a0001c0001t0002g0288 a0001c0001t0002g0289 a0001c0001t0002g0290 a0001c0001t0003g0008 a0001c0001t0003g0009 a0001c0001t0003g0011 a0001c0001t0003g0012 a0001c0001t0003g0110 a0001c0001t0003g0111 a0001c0001t0003g0113 a0001c0001t0003g0115 a0001c0001t0003g0120 a0001c0001t0003g0121 a0001c0001t0003g0122 a0001c0001t0003g0128 a0001c0001t0003g0133 a0001c0001t0003g0134 a0001c0001t0003g0147 a0001c0001t0003g0148 a0001c0001t0003g0150 a0001c0001t0003g0154 a0001c0001t0003g0157 a0001c0001t0003g0158 a0001c0001t0003g0159 a0001c0001t0003g0165 a0001c0001t0003g0167 a0001c0001t0003g0168 a0001c0001t0003g0175 a0001c0001t0003g0215 a0001c0001t0003g0260 a0001c0001t0003g0269 a0001c0001t0003g0291 a0001c0001t0003g0292 a0001c0001t0005g0013 a0001c0001t0005g0132 a0001c0002t0003g0149 a0001c0002t0003g0169	61	298	0.2047	-1	c.-45 others(6): Show c.-4529delT	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding		4413		chrX	TogoVar
SMS_chrX_21935709_21999837	21936303	CT CT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01255.hp1 HG01516.hp2 HG02258.hp1 others(5): Show HG01255.hp1 HG01516.hp2 HG02258.hp1 HG02630.hp1 HG02922.hp2 NA19011.hp1 NA19060.hp1 NA19065.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005	a0001c0001t0001g0030 a0001c0001t0001g0073 a0001c0001t0001g0256 others(5): Show a0001c0001t0001g0030 a0001c0001t0001g0073 a0001c0001t0001g0256 a0001c0001t0002g0125 a0001c0001t0002g0211 a0001c0001t0003g0124 a0001c0001t0003g0152 a0001c0001t0005g0280	8	298	0.0269	-1	c.-45 others(6): Show c.-4521delT	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding		4405		chrX	TogoVar
SMS_chrX_21935709_21999837	21936349	TG TG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19089.hp2 NA19089.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0193 a0002c0003t0002g0193	1	298	0.0034	-1	c.-44 others(6): Show c.-4475delG	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding		4359		chrX	TogoVar
SMS_chrX_21935709_21999837	21936422	TC TC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19089.hp2 NA19089.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0193 a0002c0003t0002g0193	1	298	0.0034	-1	c.-44 others(6): Show c.-4402delC	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding		4286		chrX	TogoVar
SMS_chrX_21935709_21999837	21936544	GC GC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19089.hp2 NA19089.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0193 a0002c0003t0002g0193	1	298	0.0034	-1	c.-42 others(6): Show c.-4280delC	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding		4164		chrX	TogoVar
SMS_chrX_21935709_21999837	21936593	GC GC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18972.hp1 NA18972.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0005 a0001c0001t0002g0005	1	298	0.0034	-1	c.-42 others(6): Show c.-4231delC	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding		4115		chrX	TogoVar
SMS_chrX_21935709_21999837	21936834	TA TA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00438.hp2 HG00544.hp2 HG00597.hp1 others(49): Show HG00438.hp2 HG00544.hp2 HG00597.hp1 HG00639.hp1 HG00642.hp1 HG01106.hp1 HG01255.hp1 HG01261.hp1 HG01928.hp1 HG01978.hp2 HG01981.hp2 HG02129.hp1 HG02145.hp1 HG02165.hp2 HG02273.hp1 HG02280.hp2 HG02293.hp2 HG02523.hp2 HG02809.hp1 HG02818.hp1 HG02897.hp2 HG02922.hp1 HG02970.hp1 HG02976.hp2 NA18612.hp1 NA18747.hp1 NA18940.hp1 NA18942.hp1 NA18951.hp1 NA18951.hp2 NA18961.hp1 NA18963.hp2 NA18970.hp1 NA18971.hp1 NA18972.hp2 NA18978.hp2 NA18981.hp2 NA18995.hp1 NA18999.hp1 NA19005.hp1 NA19009.hp1 NA19056.hp1 NA19057.hp1 NA19065.hp1 NA19067.hp1 NA19068.hp1 NA19077.hp1 NA19077.hp2 NA19078.hp2 NA19088.hp1 NA20129.hp1 NA20129.hp2	a0001 a0003 a0004 a0001 a0003 a0004	a0001c0001 a0003c0006 a0004c0004 a0001c0001 a0003c0006 a0004c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0003c0006t0001 a0004c0004t0013	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0006 others(49): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0006 a0001c0001t0001g0061 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0108 a0001c0001t0001g0117 a0001c0001t0001g0164 a0001c0001t0001g0222 a0001c0001t0001g0223 a0001c0001t0001g0224 a0001c0001t0001g0225 a0001c0001t0001g0227 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0235 a0001c0001t0001g0236 a0001c0001t0001g0238 a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0001g0242 a0001c0001t0001g0243 a0001c0001t0001g0244 a0001c0001t0001g0246 a0001c0001t0001g0247 a0001c0001t0001g0248 a0001c0001t0001g0249 a0001c0001t0001g0250 a0001c0001t0001g0251 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0254 a0001c0001t0001g0256 a0001c0001t0001g0294 a0001c0001t0001g0295 a0001c0001t0002g0194 a0001c0001t0002g0205 a0001c0001t0004g0043 a0001c0001t0004g0118 a0001c0001t0004g0141 a0001c0001t0004g0142 a0001c0001t0004g0143 a0001c0001t0004g0163 a0001c0001t0004g0174 a0001c0001t0007g0239 a0001c0001t0008g0237 a0001c0001t0010g0255 a0003c0006t0001g0230 a0004c0004t0013g0293	52	298	0.1745	-1	c.-39 others(6): Show c.-3990delA	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding		3874		chrX	TogoVar
SMS_chrX_21935709_21999837	21936950	TG TG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19089.hp2 NA19089.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0193 a0002c0003t0002g0193	1	298	0.0034	-1	c.-38 others(6): Show c.-3874delG	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding		3758		chrX	TogoVar
SMS_chrX_21935709_21999837	21937136	AT AT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19060.hp1 NA19060.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0280 a0001c0001t0005g0280	1	298	0.0034	-1	c.-36 others(6): Show c.-3688delT	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding		3572		chrX	TogoVar
SMS_chrX_21935709_21999837	21937198	AT AT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19089.hp2 NA19089.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0193 a0002c0003t0002g0193	1	298	0.0034	-1	c.-36 others(6): Show c.-3626delT	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding		3510		chrX	TogoVar
SMS_chrX_21935709_21999837	21937277	GC GC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19089.hp2 NA19089.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0193 a0002c0003t0002g0193	1	298	0.0034	-1	c.-35 others(6): Show c.-3547delC	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding		3431		chrX	TogoVar
SMS_chrX_21935709_21999837	21937328	TC TC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19089.hp2 NA19089.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0193 a0002c0003t0002g0193	1	298	0.0034	-1	c.-34 others(6): Show c.-3496delC	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding		3380		chrX	TogoVar
SMS_chrX_21935709_21999837	21937693	AG AG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19089.hp2 NA19089.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0193 a0002c0003t0002g0193	1	298	0.0034	-1	c.-31 others(6): Show c.-3131delG	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding		3015		chrX	TogoVar
SMS_chrX_21935709_21999837	21937807	TC TC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19089.hp2 NA19089.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0193 a0002c0003t0002g0193	1	298	0.0034	-1	c.-30 others(6): Show c.-3017delC	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding		2901		chrX	TogoVar
SMS_chrX_21935709_21999837	21939433	GC GC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18978.hp2 NA18978.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0013 a0004c0004t0013	a0004c0004t0013g0293 a0004c0004t0013g0293	1	298	0.0034	-1	c.-13 others(6): Show c.-1391delC	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding		1275		chrX	TogoVar
SMS_chrX_21935709_21999837	21939878	AT AT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18972.hp2 NA18972.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0006	1	298	0.0034	-1	c.-94 others(5): Show c.-946delT	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding		830		chrX	TogoVar
SMS_chrX_21935709_21999837	21940040	GC GC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19078.hp1 NA19078.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0186 a0001c0001t0002g0186	1	298	0.0034	-1	c.-78 others(5): Show c.-784delC	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding		668		chrX	TogoVar
SMS_chrX_21935709_21999837	21940065	GC GC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18972.hp2 NA18972.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0006	1	298	0.0034	-1	c.-75 others(5): Show c.-759delC	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding		643		chrX	TogoVar
SMS_chrX_21935709_21999837	21940133	TC TC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19001.hp2 NA19001.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0297 a0001c0001t0001g0297	1	298	0.0034	-1	c.-69 others(5): Show c.-691delC	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding		575		chrX	TogoVar
SMS_chrX_21935709_21999837	21940151	CT CT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18972.hp2 NA18972.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0006	1	298	0.0034	-1	c.-67 others(5): Show c.-673delT	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding		557		chrX	TogoVar
SMS_chrX_21935709_21999837	21940273	AC AC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19078.hp1 NA19078.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0186 a0001c0001t0002g0186	1	298	0.0034	-1	c.-55 others(5): Show c.-551delC	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding		435		chrX	TogoVar
SMS_chrX_21935709_21999837	21940388	GC GC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18972.hp2 NA18972.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0006	1	298	0.0034	-1	c.-43 others(5): Show c.-436delC	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding		320		chrX	TogoVar
SMS_chrX_21935709_21999837	21940428	TG TG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19078.hp1 NA19078.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0186 a0001c0001t0002g0186	1	298	0.0034	-1	c.-39 others(5): Show c.-396delG	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding		280		chrX	TogoVar
SMS_chrX_21935709_21999837	21941045	CG CG	C C	intron_variant intron_variant	MODIFIER	NA18972.hp1 NA18972.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0005 a0001c0001t0002g0005	1	298	0.0034	-1	c.49+ others(7): Show c.49+174delG	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding	1/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
SMS_chrX_21935709_21999837	21941155	GC GC	G G	intron_variant intron_variant	MODIFIER	NA18978.hp2 NA18978.hp2	a0004 a0004	a0004c0004 a0004c0004	a0004c0004t0013 a0004c0004t0013	a0004c0004t0013g0293 a0004c0004t0013g0293	1	298	0.0034	-1	c.49+ others(7): Show c.49+285delC	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding	1/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
SMS_chrX_21935709_21999837	21941418	TG TG	T T	intron_variant intron_variant	MODIFIER	NA18972.hp2 NA18972.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0006	1	298	0.0034	-1	c.49+ others(7): Show c.49+549delG	SMS	ENSG00000102172.16	transcript	ENST00000404933.7	protein_coding	1/10		INFO_REALIGN_3_PRIME	chrX	TogoVar

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