view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SNRK_chr3_43281540_43356143 | 43307385 | GC | G | intron_variant | MODIFIER | HG01167.hp1 HG01169.hp2 HG01891.hp2 others(11): Show |
a0001 | a0001c0002 | a0001c0002t0004 | a0001c0002t0004g0011a0001c0002t0004g0012a0001c0002t0004g0013others(8): Show | 14 | 258 | 0.0543 | -1 | c.589 others(9): Show |
SNRK | ENSG00000163788.14 | transcript | ENST00000296088.12 | protein_coding | 3/6 | chr3 | TogoVar | |||||||
SNRK_chr3_43281540_43356143 | 43313805 | TA | T | intron_variant | MODIFIER | HG02886.hp2 HG03516.hp1 NA18522.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0008 | a0001c0001t0001g0197a0001c0001t0008g0009 | 3 | 258 | 0.0116 | -1 | c.589 others(10): Show |
SNRK | ENSG00000163788.14 | transcript | ENST00000296088.12 | protein_coding | 3/6 | chr3 | TogoVar | |||||||
SNRK_chr3_43281540_43356143 | 43315301 | CT | C | intron_variant | MODIFIER | HG01167.hp1 HG01169.hp2 HG01891.hp2 others(12): Show |
a0001 | a0001c0002a0001c0011 | a0001c0002t0004a0001c0011t0021 | a0001c0002t0004g0011a0001c0002t0004g0012a0001c0002t0004g0013others(9): Show | 15 | 258 | 0.0581 | -1 | c.589 others(10): Show |
SNRK | ENSG00000163788.14 | transcript | ENST00000296088.12 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SNRK_chr3_43281540_43356143 | 43315598 | TG | T | intron_variant | MODIFIER | HG00438.hp1 HG00673.hp2 HG01070.hp2 others(14): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(2): Show | a0001c0001t0001g0026a0001c0001t0002g0003a0001c0001t0002g0029others(13): Show | 17 | 258 | 0.0659 | -1 | c.589 others(10): Show |
SNRK | ENSG00000163788.14 | transcript | ENST00000296088.12 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SNRK_chr3_43281540_43356143 | 43318356 | TA | T | intron_variant | MODIFIER | HG00544.hp1 HG00642.hp2 HG01070.hp1 others(37): Show |
a0001 | a0001c0001a0001c0003a0001c0006 | a0001c0001t0001a0001c0001t0019a0001c0003t0005others(1): Show | a0001c0001t0001g0144a0001c0001t0001g0145a0001c0001t0001g0155others(37): Show | 40 | 258 | 0.1550 | -1 | c.590 others(10): Show |
SNRK | ENSG00000163788.14 | transcript | ENST00000296088.12 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SNRK_chr3_43281540_43356143 | 43318545 | CT | C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(154): Show |
a0001a0002a0003 | a0001c0001a0001c0005a0002c0009others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(14): Show | a0001c0001t0001g0002a0001c0001t0001g0004a0001c0001t0001g0005others(147): Show | 157 | 258 | 0.6085 | -1 | c.590 others(10): Show |
SNRK | ENSG00000163788.14 | transcript | ENST00000296088.12 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SNRK_chr3_43281540_43356143 | 43319027 | CA | C | intron_variant | MODIFIER | HG01070.hp1 HG01167.hp1 HG01169.hp2 others(16): Show |
a0001 | a0001c0001a0001c0002a0001c0011 | a0001c0001t0001a0001c0002t0004a0001c0011t0021 | a0001c0001t0001g0176a0001c0001t0001g0177a0001c0001t0001g0178others(13): Show | 19 | 258 | 0.0736 | -1 | c.590 others(10): Show |
SNRK | ENSG00000163788.14 | transcript | ENST00000296088.12 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SNRK_chr3_43281540_43356143 | 43320665 | GT | G | intron_variant | MODIFIER | HG01109.hp1 HG01167.hp1 HG01169.hp2 others(39): Show |
a0001 | a0001c0001a0001c0002a0001c0004others(2): Show | a0001c0001t0001a0001c0001t0006a0001c0002t0004others(3): Show | a0001c0001t0001g0008a0001c0001t0001g0137a0001c0001t0001g0138others(31): Show | 42 | 258 | 0.1628 | -1 | c.590 others(10): Show |
SNRK | ENSG00000163788.14 | transcript | ENST00000296088.12 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SNRK_chr3_43281540_43356143 | 43320930 | GT | G | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(241): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(21): Show | a0001c0001t0001g0002a0001c0001t0001g0004a0001c0001t0001g0005others(226): Show | 244 | 258 | 0.9457 | -1 | c.590 others(10): Show |
SNRK | ENSG00000163788.14 | transcript | ENST00000296088.12 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SNRK_chr3_43281540_43356143 | 43323095 | GT | G | intron_variant | MODIFIER | HG01167.hp1 HG01169.hp2 HG01891.hp2 others(12): Show |
a0001 | a0001c0002a0001c0011 | a0001c0002t0004a0001c0011t0021 | a0001c0002t0004g0011a0001c0002t0004g0012a0001c0002t0004g0013others(9): Show | 15 | 258 | 0.0581 | -1 | c.590 others(9): Show |
SNRK | ENSG00000163788.14 | transcript | ENST00000296088.12 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SNRK_chr3_43281540_43356143 | 43324508 | CA | C | intron_variant | MODIFIER | HG00408.hp2 HG00621.hp1 HG00639.hp2 others(96): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(8): Show | a0001c0001t0001g0002a0001c0001t0001g0004a0001c0001t0001g0005others(88): Show | 99 | 258 | 0.3837 | -1 | c.590 others(9): Show |
SNRK | ENSG00000163788.14 | transcript | ENST00000296088.12 | protein_coding | 3/6 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SNRK_chr3_43281540_43356143 | 43327684 | TG | T | intron_variant | MODIFIER | HG01167.hp1 HG01169.hp2 HG01891.hp2 others(12): Show |
a0001 | a0001c0002a0001c0011 | a0001c0002t0004a0001c0011t0021 | a0001c0002t0004g0011a0001c0002t0004g0012a0001c0002t0004g0013others(9): Show | 15 | 258 | 0.0581 | -1 | c.590 others(9): Show |
SNRK | ENSG00000163788.14 | transcript | ENST00000296088.12 | protein_coding | 3/6 | chr3 | TogoVar | |||||||
SNRK_chr3_43281540_43356143 | 43333358 | CA | C | intron_variant | MODIFIER | HG00099.hp2 HG00408.hp2 HG00544.hp1 others(86): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(11): Show | a0001c0001t0001g0002a0001c0001t0001g0005a0001c0001t0001g0006others(81): Show | 89 | 258 | 0.3450 | -1 | c.731 others(9): Show |
SNRK | ENSG00000163788.14 | transcript | ENST00000296088.12 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SNRK_chr3_43281540_43356143 | 43337563 | AT | A | intron_variant | MODIFIER | HG01167.hp1 HG01169.hp2 HG01891.hp2 others(12): Show |
a0001 | a0001c0002a0001c0011 | a0001c0002t0004a0001c0011t0021 | a0001c0002t0004g0011a0001c0002t0004g0012a0001c0002t0004g0013others(9): Show | 15 | 258 | 0.0581 | -1 | c.732 others(9): Show |
SNRK | ENSG00000163788.14 | transcript | ENST00000296088.12 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SNRK_chr3_43281540_43356143 | 43343533 | CT | C | intron_variant | MODIFIER | HG00639.hp1 HG01243.hp1 HG02886.hp2 others(9): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0008others(1): Show | a0001c0001t0001g0025a0001c0001t0001g0134a0001c0001t0001g0142others(8): Show | 12 | 258 | 0.0465 | -1 | c.107 others(8): Show |
SNRK | ENSG00000163788.14 | transcript | ENST00000296088.12 | protein_coding | 6/6 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
SNRK_chr3_43281540_43356143 | 43349461 | CA | C | 3_prime_UTR_variant | MODIFIER | HG01167.hp1 HG01169.hp2 HG01891.hp2 others(12): Show |
a0001 | a0001c0002a0001c0011 | a0001c0002t0004a0001c0011t0021 | a0001c0002t0004g0011a0001c0002t0004g0012a0001c0002t0004g0013others(9): Show | 15 | 258 | 0.0581 | -1 | c.*90 others(5): Show |
SNRK | ENSG00000163788.14 | transcript | ENST00000296088.12 | protein_coding | 7/7 | 908 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
SNRK_chr3_43281540_43356143 | 43353352 | CA | C | downstream_gene_variant | MODIFIER | HG00438.hp1 HG00544.hp1 HG00544.hp2 others(85): Show |
a0001 | a0001c0001a0001c0003a0001c0004others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(12): Show | a0001c0001t0001g0004a0001c0001t0001g0008a0001c0001t0001g0019others(78): Show | 88 | 258 | 0.3411 | -1 | c.*47 others(6): Show |
SNRK | ENSG00000163788.14 | transcript | ENST00000296088.12 | protein_coding | 2210 | chr3 | TogoVar | |||||||
SNRNP200_chr2_96269338_96310546 | 96270503 | GA | G | downstream_gene_variant | MODIFIER | HG01099.hp1 HG02132.hp2 HG02145.hp2 others(9): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0002t0001a0001c0003t0001 | a0001c0001t0001g0016a0001c0001t0001g0130a0001c0001t0001g0131others(6): Show | 12 | 352 | 0.0341 | -1 | c.*45 others(6): Show |
SNRNP200 | ENSG00000144028.15 | transcript | ENST00000323853.10 | protein_coding | 3834 | chr2 | TogoVar | |||||||
SNRNP200_chr2_96269338_96310546 | 96270809 | CA | C | downstream_gene_variant | MODIFIER | HG01070.hp1 HG01070.hp2 HG01928.hp1 others(15): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0002t0001a0001c0002t0002others(1): Show | a0001c0001t0001g0005a0001c0001t0001g0011a0001c0001t0001g0133others(8): Show | 18 | 352 | 0.0511 | -1 | c.*42 others(6): Show |
SNRNP200 | ENSG00000144028.15 | transcript | ENST00000323853.10 | protein_coding | 3528 | chr2 | TogoVar | |||||||
SNRNP200_chr2_96269338_96310546 | 96273662 | CA | C | downstream_gene_variant | MODIFIER | HG00323.hp1 HG01069.hp2 HG02074.hp1 others(23): Show |
a0001a0007 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0002t0001a0001c0002t0002others(3): Show | a0001c0001t0001g0005a0001c0001t0001g0010a0001c0001t0001g0011others(18): Show | 26 | 352 | 0.0739 | -1 | c.*13 others(6): Show |
SNRNP200 | ENSG00000144028.15 | transcript | ENST00000323853.10 | protein_coding | 675 | chr2 | TogoVar | |||||||
SNRNP200_chr2_96269338_96310546 | 96276420 | AT | A | intron_variant | MODIFIER | HG01069.hp1 HG01069.hp2 HG01891.hp1 others(9): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0048a0001c0001t0001g0049a0001c0001t0001g0084others(9): Show | 12 | 352 | 0.0341 | -1 | c.617 others(9): Show |
SNRNP200 | ENSG00000144028.15 | transcript | ENST00000323853.10 | protein_coding | 43/44 | chr2 | TogoVar | |||||||
SNRNP200_chr2_96269338_96310546 | 96280848 | CT | C | intron_variant | MODIFIER | HG01256.hp1 HG01256.hp2 HG02040.hp1 others(14): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0002t0001a0001c0002t0002others(2): Show | a0001c0001t0001g0011a0001c0001t0001g0062a0001c0001t0001g0098others(10): Show | 17 | 352 | 0.0483 | -1 | c.502 others(9): Show |
SNRNP200 | ENSG00000144028.15 | transcript | ENST00000323853.10 | protein_coding | 35/44 | chr2 | TogoVar | |||||||
SNRNP200_chr2_96269338_96310546 | 96281163 | CT | C | intron_variant | MODIFIER | HG00323.hp2 HG01168.hp2 HG01243.hp2 others(6): Show |
a0001a0005 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0002t0001a0001c0003t0001others(2): Show | a0001c0001t0001g0053a0001c0001t0001g0098a0001c0002t0001g0070others(6): Show | 9 | 352 | 0.0256 | -1 | c.502 others(9): Show |
SNRNP200 | ENSG00000144028.15 | transcript | ENST00000323853.10 | protein_coding | 35/44 | chr2 | TogoVar | |||||||
SNRNP200_chr2_96269338_96310546 | 96284749 | CT | C | intron_variant | MODIFIER | HG00558.hp2 HG01109.hp2 HG01361.hp2 others(28): Show |
a0001 | a0001c0001a0001c0005a0001c0022 | a0001c0001t0001a0001c0005t0001a0001c0022t0001 | a0001c0001t0001g0005a0001c0001t0001g0014a0001c0001t0001g0034others(13): Show | 31 | 352 | 0.0881 | -1 | c.416 others(9): Show |
SNRNP200 | ENSG00000144028.15 | transcript | ENST00000323853.10 | protein_coding | 30/44 | chr2 | TogoVar | |||||||
SNRNP200_chr2_96269338_96310546 | 96288449 | TC | T | intron_variant | MODIFIER | HG00673.hp1 NA18939.hp2 NA18946.hp2 others(4): Show |
a0001 | a0001c0006 | a0001c0006t0001 | a0001c0006t0001g0023a0001c0006t0001g0180a0001c0006t0001g0181others(2): Show | 7 | 352 | 0.0199 | -1 | c.325 others(9): Show |
SNRNP200 | ENSG00000144028.15 | transcript | ENST00000323853.10 | protein_coding | 24/44 | chr2 | TogoVar | |||||||
SNRNP200_chr2_96269338_96310546 | 96293561 | CT | C | intron_variant | MODIFIER | HG02922.hp2 NA19043.hp2 NA19240.hp1 |
a0001 | a0001c0007 | a0001c0007t0004 | a0001c0007t0004g0190a0001c0007t0004g0191a0001c0007t0004g0192 | 3 | 352 | 0.0085 | -1 | c.184 others(8): Show |
SNRNP200 | ENSG00000144028.15 | transcript | ENST00000323853.10 | protein_coding | 14/44 | chr2 | TogoVar | |||||||
SNRNP200_chr2_96269338_96310546 | 96294132 | CA | C | intron_variant | MODIFIER | HG00673.hp1 HG01167.hp1 HG01167.hp2 others(12): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0002t0001a0001c0003t0001others(2): Show | a0001c0001t0001g0049a0001c0002t0001g0068a0001c0003t0001g0044others(9): Show | 15 | 352 | 0.0426 | -1 | c.184 others(9): Show |
SNRNP200 | ENSG00000144028.15 | transcript | ENST00000323853.10 | protein_coding | 14/44 | chr2 | TogoVar | |||||||
SNRNP200_chr2_96269338_96310546 | 96303888 | CA | C | intron_variant | MODIFIER | HG01167.hp1 HG01975.hp2 HG03491.hp1 others(6): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0010 | a0001c0001t0001a0001c0002t0001a0002c0010t0001 | a0001c0001t0001g0062a0001c0002t0001g0024a0001c0002t0001g0052others(5): Show | 9 | 352 | 0.0256 | -1 | c.210 others(8): Show |
SNRNP200 | ENSG00000144028.15 | transcript | ENST00000323853.10 | protein_coding | 2/44 | chr2 | TogoVar | |||||||
SNRNP200_chr2_96269338_96310546 | 96304247 | TA | T | intron_variant | MODIFIER | HG01243.hp2 HG01884.hp2 HG01975.hp2 others(10): Show |
a0001 | a0001c0001a0001c0002a0001c0004others(1): Show | a0001c0001t0001a0001c0002t0001a0001c0004t0001others(1): Show | a0001c0001t0001g0053a0001c0002t0001g0052a0001c0004t0001g0006others(4): Show | 13 | 352 | 0.0369 | -1 | c.209 others(8): Show |
SNRNP200 | ENSG00000144028.15 | transcript | ENST00000323853.10 | protein_coding | 2/44 | chr2 | TogoVar | |||||||
SNRNP200_chr2_96269338_96310546 | 96307136 | TA | T | upstream_gene_variant | MODIFIER | HG01069.hp1 HG02922.hp2 NA19043.hp2 others(3): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0002t0001a0001c0003t0001others(1): Show | a0001c0001t0001g0036a0001c0002t0001g0074a0001c0003t0001g0002others(3): Show | 6 | 352 | 0.0171 | -1 | c.-17 others(6): Show |
SNRNP200 | ENSG00000144028.15 | transcript | ENST00000323853.10 | protein_coding | 1591 | chr2 | TogoVar | |||||||
SNRNP200_chr2_96269338_96310546 | 96308247 | CT | C | upstream_gene_variant | MODIFIER | HG02572.hp1 NA18939.hp1 NA18946.hp1 others(4): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0002t0001a0001c0003t0001others(1): Show | a0001c0001t0001g0036a0001c0001t0001g0062a0001c0001t0001g0098others(4): Show | 7 | 352 | 0.0199 | -1 | c.-28 others(6): Show |
SNRNP200 | ENSG00000144028.15 | transcript | ENST00000323853.10 | protein_coding | 2702 | chr2 | TogoVar | |||||||
SNRNP25_chr16_48828_62669 | 49492 | AT | A | upstream_gene_variant | MODIFIER | HG00140.hp1 HG00735.hp1 HG01074.hp1 others(32): Show |
a0001a0003 | a0001c0001a0003c0006 | a0001c0001t0003a0001c0001t0004a0001c0001t0009others(1): Show | a0001c0001t0003g0003a0001c0001t0003g0010a0001c0001t0003g0016others(8): Show | 35 | 424 | 0.0826 | -1 | c.-45 others(6): Show |
SNRNP25 | ENSG00000161981.11 | transcript | ENST00000293861.8 | protein_coding | 4335 | chr16 | TogoVar | |||||||
SNRNP25_chr16_48828_62669 | 52446 | CA | C | upstream_gene_variant | MODIFIER | HG00642.hp2 HG01515.hp1 HG02040.hp2 others(17): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0002t0006 | a0001c0001t0002g0002a0001c0002t0006g0011 | 20 | 424 | 0.0472 | -1 | c.-15 others(6): Show |
SNRNP25 | ENSG00000161981.11 | transcript | ENST00000293861.8 | protein_coding | 1381 | chr16 | TogoVar | |||||||
SNRNP27_chr2_69888956_69910236 | 69889977 | CT | C | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00408.hp1 others(153): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0001a0001c0001t0001g0006a0001c0001t0001g0010others(79): Show | 156 | 440 | 0.3546 | -1 | c.-40 others(6): Show |
SNRNP27 | ENSG00000124380.11 | transcript | ENST00000244227.8 | protein_coding | 3978 | chr2 | TogoVar | |||||||
SNRNP27_chr2_69888956_69910236 | 69891672 | CT | C | upstream_gene_variant | MODIFIER | HG00140.hp1 HG00280.hp1 HG00408.hp2 others(126): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(10): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0010others(43): Show | 129 | 440 | 0.2932 | -1 | c.-23 others(6): Show |
SNRNP27 | ENSG00000124380.11 | transcript | ENST00000244227.8 | protein_coding | 2283 | chr2 | TogoVar | |||||||
SNRNP27_chr2_69888956_69910236 | 69893777 | GA | G | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00408.hp1 others(158): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(8): Show | a0001c0001t0001g0010a0001c0001t0001g0036a0001c0001t0001g0063others(70): Show | 161 | 440 | 0.3659 | -1 | c.-20 others(5): Show |
SNRNP27 | ENSG00000124380.11 | transcript | ENST00000244227.8 | protein_coding | 178 | chr2 | TogoVar | |||||||
SNRNP27_chr2_69888956_69910236 | 69894920 | TC | T | intron_variant | MODIFIER | HG01167.hp1 HG02572.hp2 HG02896.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0025a0001c0001t0004g0084a0001c0001t0004g0085 | 5 | 440 | 0.0114 | -1 | c.35- others(7): Show |
SNRNP27 | ENSG00000124380.11 | transcript | ENST00000244227.8 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNRNP27_chr2_69888956_69910236 | 69895974 | GT | G | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp1 HG00438.hp1 others(109): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(10): Show | a0001c0001t0001g0036a0001c0001t0001g0093a0001c0001t0001g0094others(44): Show | 112 | 440 | 0.2546 | -1 | c.156 others(8): Show |
SNRNP27 | ENSG00000124380.11 | transcript | ENST00000244227.8 | protein_coding | 2/5 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNRNP27_chr2_69888956_69910236 | 69901184 | AG | A | intron_variant | MODIFIER | HG00099.hp1 HG00544.hp2 HG00609.hp2 others(35): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003a0001c0001t0006others(2): Show | a0001c0001t0002g0069a0001c0001t0002g0071a0001c0001t0002g0076others(14): Show | 38 | 440 | 0.0864 | -1 | c.349 others(9): Show |
SNRNP27 | ENSG00000124380.11 | transcript | ENST00000244227.8 | protein_coding | 4/5 | chr2 | TogoVar | |||||||
SNRNP27_chr2_69888956_69910236 | 69902108 | CG | C | intron_variant | MODIFIER | HG01891.hp1 HG02055.hp2 HG02257.hp2 others(11): Show |
a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0012a0001c0001t0004g0021a0001c0001t0004g0022others(3): Show | 14 | 440 | 0.0318 | -1 | c.349 others(9): Show |
SNRNP27 | ENSG00000124380.11 | transcript | ENST00000244227.8 | protein_coding | 4/5 | chr2 | TogoVar | |||||||
SNRNP27_chr2_69888956_69910236 | 69902938 | CT | C | intron_variant | MODIFIER | HG01123.hp2 HG01168.hp1 HG01515.hp2 others(21): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0007others(2): Show | a0001c0001t0001g0020a0001c0001t0001g0044a0001c0001t0001g0114others(13): Show | 24 | 440 | 0.0546 | -1 | c.349 others(8): Show |
SNRNP27 | ENSG00000124380.11 | transcript | ENST00000244227.8 | protein_coding | 4/5 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SNRNP27_chr2_69888956_69910236 | 69906025 | CT | C | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00280.hp1 others(260): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(15): Show | a0001c0001t0001g0010a0001c0001t0001g0036a0001c0001t0001g0063others(110): Show | 263 | 440 | 0.5977 | -1 | c.*17 others(6): Show |
SNRNP27 | ENSG00000124380.11 | transcript | ENST00000244227.8 | protein_coding | 790 | chr2 | TogoVar | |||||||
SNRNP27_chr2_69888956_69910236 | 69906559 | CT | C | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00280.hp1 others(212): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(10): Show | a0001c0001t0001g0001a0001c0001t0001g0010a0001c0001t0001g0036others(87): Show | 215 | 440 | 0.4886 | -1 | c.*22 others(6): Show |
SNRNP27 | ENSG00000124380.11 | transcript | ENST00000244227.8 | protein_coding | 1324 | chr2 | TogoVar | |||||||
SNRNP27_chr2_69888956_69910236 | 69906728 | AT | A | downstream_gene_variant | MODIFIER | HG00408.hp2 HG01256.hp1 NA18963.hp2 others(3): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0005a0002c0002t0021 | a0001c0001t0001g0003a0001c0001t0001g0138a0001c0001t0005g0003others(1): Show | 6 | 440 | 0.0136 | -1 | c.*24 others(6): Show |
SNRNP27 | ENSG00000124380.11 | transcript | ENST00000244227.8 | protein_coding | 1493 | chr2 | TogoVar | |||||||
SNRNP27_chr2_69888956_69910236 | 69908584 | AG | A | downstream_gene_variant | MODIFIER | HG02622.hp2 HG02895.hp2 HG02897.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0020 | a0001c0001t0001g0039a0001c0001t0001g0088a0001c0001t0001g0117others(3): Show | 6 | 440 | 0.0136 | -1 | c.*42 others(6): Show |
SNRNP27 | ENSG00000124380.11 | transcript | ENST00000244227.8 | protein_coding | 3349 | chr2 | TogoVar | |||||||
SNRNP35_chr12_123453139_123471936 | 123453377 | CT | C | upstream_gene_variant | MODIFIER | HG01261.hp1 HG01884.hp1 HG02055.hp2 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0007others(1): Show | a0001c0001t0001g0002a0001c0001t0001g0008a0001c0001t0002g0087others(3): Show | 6 | 186 | 0.0323 | -1 | c.-48 others(6): Show |
SNRNP35 | ENSG00000184209.15 | transcript | ENST00000526639.3 | protein_coding | 4761 | chr12 | TogoVar | |||||||
SNRNP35_chr12_123453139_123471936 | 123453863 | TG | T | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00323.hp1 others(79): Show |
a0001a0002a0003 | a0001c0001a0002c0004a0003c0005 | a0001c0001t0001a0002c0004t0001a0003c0005t0001 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(45): Show | 82 | 186 | 0.4409 | -1 | c.-43 others(6): Show |
SNRNP35 | ENSG00000184209.15 | transcript | ENST00000526639.3 | protein_coding | 4275 | chr12 | TogoVar | |||||||
SNRNP35_chr12_123453139_123471936 | 123454262 | TC | T | upstream_gene_variant | MODIFIER | HG01516.hp2 NA18973.hp2 NA18979.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0008a0001c0001t0001g0012a0001c0001t0002g0005 | 3 | 186 | 0.0161 | -1 | c.-39 others(6): Show |
SNRNP35 | ENSG00000184209.15 | transcript | ENST00000526639.3 | protein_coding | 3876 | chr12 | TogoVar | |||||||
SNRNP35_chr12_123453139_123471936 | 123455302 | AT | A | upstream_gene_variant | MODIFIER | HG01109.hp1 HG03831.hp2 NA18973.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0012a0001c0001t0002g0066a0001c0001t0002g0068 | 3 | 186 | 0.0161 | -1 | c.-29 others(6): Show |
SNRNP35 | ENSG00000184209.15 | transcript | ENST00000526639.3 | protein_coding | 2836 | chr12 | TogoVar | |||||||
SNRNP35_chr12_123453139_123471936 | 123456070 | CT | C | upstream_gene_variant | MODIFIER | HG01069.hp1 HG01099.hp1 HG01109.hp2 others(16): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(5): Show | a0001c0001t0002g0021a0001c0001t0002g0083a0001c0001t0002g0085others(14): Show | 19 | 186 | 0.1022 | -1 | c.-21 others(6): Show |
SNRNP35 | ENSG00000184209.15 | transcript | ENST00000526639.3 | protein_coding | 2068 | chr12 | TogoVar |