Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
SPANXA2_chrX_141584708_141595762	141589249	TG TG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0013 a0013	a0013c0007 a0013c0007	a0013c0007t0007 a0013c0007t0007	a0013c0007t0007g0017 a0013c0007t0007g0017	1	185	0.0054	-1	c.-51 others(5): Show c.-518delG		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					458		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141589297	TG TG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0013 a0013	a0013c0007 a0013c0007	a0013c0007t0007 a0013c0007t0007	a0013c0007t0007g0017 a0013c0007t0007g0017	1	185	0.0054	-1	c.-47 others(5): Show c.-470delG		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					410		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141589488	AG AG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0013 a0013	a0013c0007 a0013c0007	a0013c0007t0007 a0013c0007t0007	a0013c0007t0007g0017 a0013c0007t0007g0017	1	185	0.0054	-1	c.-27 others(5): Show c.-279delG		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					219		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141589515	TG TG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0013 a0013	a0013c0007 a0013c0007	a0013c0007t0007 a0013c0007t0007	a0013c0007t0007g0017 a0013c0007t0007g0017	1	185	0.0054	-1	c.-25 others(5): Show c.-252delG		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					192		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141589552	GC GC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18965.hp1 NA19063.hp1 NA18965.hp1 NA19063.hp1	a0013 a0015 a0013 a0015	a0013c0007 a0015c0016 a0013c0007 a0015c0016	a0013c0007t0007 a0015c0016t0001 a0013c0007t0007 a0015c0016t0001	a0013c0007t0007g0017 a0015c0016t0001g0011 a0013c0007t0007g0017 a0015c0016t0001g0011	2	185	0.0108	-1	c.-21 others(5): Show c.-215delC		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					155		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141589689	AG AG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0013 a0013	a0013c0007 a0013c0007	a0013c0007t0007 a0013c0007t0007	a0013c0007t0007g0017 a0013c0007t0007g0017	1	185	0.0054	-1	c.-78 others(4): Show c.-78delG		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					18		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141589729	CA CA	C C	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0013 a0013	a0013c0007 a0013c0007	a0013c0007t0007 a0013c0007t0007	a0013c0007t0007g0017 a0013c0007t0007g0017	1	185	0.0054	-1	c.-35 others(4): Show c.-35delA		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding	1/2				35	INFO_REALIGN_3_PRIME	chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141589808	TC TC	T T	frameshift_variant frameshift_variant	HIGH	NA19063.hp1 NA19063.hp1	a0015 a0015	a0015c0016 a0015c0016	a0015c0016t0001 a0015c0016t0001	a0015c0016t0001g0011 a0015c0016t0001g0011	1	185	0.0054	-1	c.45d others(3): Show c.45delC	p.Cys others(4): Show p.Cys16fs	SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding	1/2	105/408	45/294	15/97		INFO_REALIGN_3_PRIME	chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141590040	CG CG	C C	intron_variant intron_variant	MODIFIER	NA19063.hp1 NA19063.hp1	a0015 a0015	a0015c0016 a0015c0016	a0015c0016t0001 a0015c0016t0001	a0015c0016t0001g0011 a0015c0016t0001g0011	1	185	0.0054	-1	c.72+ others(7): Show c.72+203delG		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding	1/1					INFO_REALIGN_3_PRIME	chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141590075	TG TG	T T	intron_variant intron_variant	MODIFIER	NA19063.hp1 NA19063.hp1	a0015 a0015	a0015c0016 a0015c0016	a0015c0016t0001 a0015c0016t0001	a0015c0016t0001g0011 a0015c0016t0001g0011	1	185	0.0054	-1	c.72+ others(7): Show c.72+238delG		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding	1/1					INFO_REALIGN_3_PRIME	chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141590253	CA CA	C C	intron_variant intron_variant	MODIFIER	NA18982.hp1 NA18982.hp1	a0014 a0014	a0014c0008 a0014c0008	a0014c0008t0002 a0014c0008t0002	a0014c0008t0002g0019 a0014c0008t0002g0019	1	185	0.0054	-1	c.73- others(7): Show c.73-230delA		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding	1/1					INFO_REALIGN_3_PRIME	chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141590382	TC TC	T T	intron_variant intron_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0013 a0013	a0013c0007 a0013c0007	a0013c0007t0007 a0013c0007t0007	a0013c0007t0007g0017 a0013c0007t0007g0017	1	185	0.0054	-1	c.73- others(7): Show c.73-103delC		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding	1/1					INFO_REALIGN_3_PRIME	chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141590591	TA TA	T T	frameshift_variant frameshift_variant	HIGH	NA18965.hp1 NA18965.hp1	a0013 a0013	a0013c0007 a0013c0007	a0013c0007t0007 a0013c0007t0007	a0013c0007t0007g0017 a0013c0007t0007g0017	1	185	0.0054	-1	c.181 others(4): Show c.181delA	p.Arg others(4): Show p.Arg61fs	SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding	2/2	241/408	181/294	61/97		INFO_REALIGN_3_PRIME	chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141590679	GA GA	G G	frameshift_variant frameshift_variant	HIGH	NA18955.hp1 NA18955.hp1	a0012 a0012	a0012c0009 a0012c0009	a0012c0009t0001 a0012c0009t0001	a0012c0009t0001g0013 a0012c0009t0001g0013	1	185	0.0054	-1	c.268 others(4): Show c.268delA	p.Ile others(4): Show p.Ile90fs	SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding	2/2	328/408	268/294	90/97		INFO_REALIGN_3_PRIME	chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141590784	GT GT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0013 a0013	a0013c0007 a0013c0007	a0013c0007t0007 a0013c0007t0007	a0013c0007t0007g0017 a0013c0007t0007g0017	1	185	0.0054	-1	c.77 others(4): Show c.77delT		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					23		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141590953	TA TA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00609.hp1 HG00609.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	185	0.0054	-1	c.24 others(5): Show c.246delA		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					192		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141591007	CG CG	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0013 a0013	a0013c0007 a0013c0007	a0013c0007t0007 a0013c0007t0007	a0013c0007t0007g0017 a0013c0007t0007g0017	1	185	0.0054	-1	c.30 others(5): Show c.300delG		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					246		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141591317	CA CA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02615.hp2 HG02818.hp1 HG02895.hp1 others(1): Show HG02615.hp2 HG02818.hp1 HG02895.hp1 HG03209.hp1	a0004 a0004	a0004c0006 a0004c0017 a0004c0018 a0004c0006 a0004c0017 a0004c0018	a0004c0006t0004 a0004c0006t0009 a0004c0017t0004 others(1): Show a0004c0006t0004 a0004c0006t0009 a0004c0017t0004 a0004c0018t0004	a0004c0006t0004g0010 a0004c0006t0009g0010 a0004c0017t0004g0009 others(1): Show a0004c0006t0004g0010 a0004c0006t0009g0010 a0004c0017t0004g0009 a0004c0018t0004g0009	4	185	0.0216	-1	c.61 others(5): Show c.610delA		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					556		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141591348	TG TG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0012 a0012	a0012c0009 a0012c0009	a0012c0009t0001 a0012c0009t0001	a0012c0009t0001g0013 a0012c0009t0001g0013	1	185	0.0054	-1	c.64 others(5): Show c.641delG		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					587		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141591492	AT AT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0013 a0013	a0013c0007 a0013c0007	a0013c0007t0007 a0013c0007t0007	a0013c0007t0007g0017 a0013c0007t0007g0017	1	185	0.0054	-1	c.78 others(5): Show c.785delT		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					731		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141591596	GA GA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0013 a0013	a0013c0007 a0013c0007	a0013c0007t0007 a0013c0007t0007	a0013c0007t0007g0017 a0013c0007t0007g0017	1	185	0.0054	-1	c.88 others(5): Show c.889delA		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					835		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141591627	CG CG	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0013 a0013	a0013c0007 a0013c0007	a0013c0007t0007 a0013c0007t0007	a0013c0007t0007g0017 a0013c0007t0007g0017	1	185	0.0054	-1	c.92 others(5): Show c.920delG		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					866		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141591818	AT AT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0012 a0012	a0012c0009 a0012c0009	a0012c0009t0001 a0012c0009t0001	a0012c0009t0001g0013 a0012c0009t0001g0013	1	185	0.0054	-1	c.11 others(6): Show c.1111delT		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					1057		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141591958	TC TC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0013 a0013	a0013c0007 a0013c0007	a0013c0007t0007 a0013c0007t0007	a0013c0007t0007g0017 a0013c0007t0007g0017	1	185	0.0054	-1	c.12 others(6): Show c.1251delC		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					1197		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141591973	CA CA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0007 a0007	a0007c0014 a0007c0014	a0007c0014t0006 a0007c0014t0006	a0007c0014t0006g0018 a0007c0014t0006g0018	1	185	0.0054	-1	c.12 others(6): Show c.1266delA		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					1212		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141592195	GA GA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0013 a0013	a0013c0007 a0013c0007	a0013c0007t0007 a0013c0007t0007	a0013c0007t0007g0017 a0013c0007t0007g0017	1	185	0.0054	-1	c.14 others(6): Show c.1488delA		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					1434		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141592702	CT CT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19063.hp1 NA19063.hp1	a0015 a0015	a0015c0016 a0015c0016	a0015c0016t0001 a0015c0016t0001	a0015c0016t0001g0011 a0015c0016t0001g0011	1	185	0.0054	-1	c.19 others(6): Show c.1995delT		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					1941		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141592785	CG CG	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0013 a0013	a0013c0007 a0013c0007	a0013c0007t0007 a0013c0007t0007	a0013c0007t0007g0017 a0013c0007t0007g0017	1	185	0.0054	-1	c.20 others(6): Show c.2078delG		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					2024		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141592854	AC AC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18965.hp1 NA19063.hp1 NA18965.hp1 NA19063.hp1	a0013 a0015 a0013 a0015	a0013c0007 a0015c0016 a0013c0007 a0015c0016	a0013c0007t0007 a0015c0016t0001 a0013c0007t0007 a0015c0016t0001	a0013c0007t0007g0017 a0015c0016t0001g0011 a0013c0007t0007g0017 a0015c0016t0001g0011	2	185	0.0108	-1	c.21 others(6): Show c.2147delC		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					2093		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141592940	GT GT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00609.hp1 HG00609.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	185	0.0054	-1	c.22 others(6): Show c.2233delT		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					2179		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141592996	CG CG	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01168.hp2 NA18965.hp1 HG01168.hp2 NA18965.hp1	a0001 a0013 a0001 a0013	a0001c0001 a0013c0007 a0001c0001 a0013c0007	a0001c0001t0001 a0013c0007t0007 a0001c0001t0001 a0013c0007t0007	a0001c0001t0001g0001 a0013c0007t0007g0017 a0001c0001t0001g0001 a0013c0007t0007g0017	2	185	0.0108	-1	c.22 others(6): Show c.2289delG		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					2235		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141593067	GA GA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0013 a0013	a0013c0007 a0013c0007	a0013c0007t0007 a0013c0007t0007	a0013c0007t0007g0017 a0013c0007t0007g0017	1	185	0.0054	-1	c.23 others(6): Show c.2360delA		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					2306		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141593086	GA GA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0013 a0013	a0013c0007 a0013c0007	a0013c0007t0007 a0013c0007t0007	a0013c0007t0007g0017 a0013c0007t0007g0017	1	185	0.0054	-1	c.23 others(6): Show c.2379delA		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					2325		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141593091	GA GA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0013 a0013	a0013c0007 a0013c0007	a0013c0007t0007 a0013c0007t0007	a0013c0007t0007g0017 a0013c0007t0007g0017	1	185	0.0054	-1	c.23 others(6): Show c.2384delA		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					2330		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141593151	GC GC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0013 a0013	a0013c0007 a0013c0007	a0013c0007t0007 a0013c0007t0007	a0013c0007t0007g0017 a0013c0007t0007g0017	1	185	0.0054	-1	c.24 others(6): Show c.2444delC		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					2390		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141593210	TG TG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01168.hp2 HG01168.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	185	0.0054	-1	c.25 others(6): Show c.2503delG		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					2449		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141593298	AT AT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0013 a0013	a0013c0007 a0013c0007	a0013c0007t0007 a0013c0007t0007	a0013c0007t0007g0017 a0013c0007t0007g0017	1	185	0.0054	-1	c.25 others(6): Show c.2591delT		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					2537		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141593312	TA TA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0013 a0013	a0013c0007 a0013c0007	a0013c0007t0007 a0013c0007t0007	a0013c0007t0007g0017 a0013c0007t0007g0017	1	185	0.0054	-1	c.26 others(6): Show c.2605delA		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					2551		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141593383	TA TA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18965.hp1 NA19063.hp1 NA18965.hp1 NA19063.hp1	a0013 a0015 a0013 a0015	a0013c0007 a0015c0016 a0013c0007 a0015c0016	a0013c0007t0007 a0015c0016t0001 a0013c0007t0007 a0015c0016t0001	a0013c0007t0007g0017 a0015c0016t0001g0011 a0013c0007t0007g0017 a0015c0016t0001g0011	2	185	0.0108	-1	c.26 others(6): Show c.2676delA		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					2622		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141593531	AG AG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19063.hp1 NA19063.hp1	a0015 a0015	a0015c0016 a0015c0016	a0015c0016t0001 a0015c0016t0001	a0015c0016t0001g0011 a0015c0016t0001g0011	1	185	0.0054	-1	c.28 others(6): Show c.2824delG		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					2770		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141593571	TG TG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0013 a0013	a0013c0007 a0013c0007	a0013c0007t0007 a0013c0007t0007	a0013c0007t0007g0017 a0013c0007t0007g0017	1	185	0.0054	-1	c.28 others(6): Show c.2864delG		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					2810		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141593588	GT GT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18968.hp2 NA18968.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	185	0.0054	-1	c.28 others(6): Show c.2881delT		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					2827		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141593723	CA CA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0013 a0013	a0013c0007 a0013c0007	a0013c0007t0007 a0013c0007t0007	a0013c0007t0007g0017 a0013c0007t0007g0017	1	185	0.0054	-1	c.30 others(6): Show c.3016delA		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					2962		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141593756	GA GA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19063.hp1 NA19063.hp1	a0015 a0015	a0015c0016 a0015c0016	a0015c0016t0001 a0015c0016t0001	a0015c0016t0001g0011 a0015c0016t0001g0011	1	185	0.0054	-1	c.30 others(6): Show c.3049delA		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					2995		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141593794	AG AG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18965.hp1 NA19063.hp1 NA18965.hp1 NA19063.hp1	a0013 a0015 a0013 a0015	a0013c0007 a0015c0016 a0013c0007 a0015c0016	a0013c0007t0007 a0015c0016t0001 a0013c0007t0007 a0015c0016t0001	a0013c0007t0007g0017 a0015c0016t0001g0011 a0013c0007t0007g0017 a0015c0016t0001g0011	2	185	0.0108	-1	c.30 others(6): Show c.3087delG		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					3033		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141593814	TG TG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18965.hp1 NA18965.hp1	a0013 a0013	a0013c0007 a0013c0007	a0013c0007t0007 a0013c0007t0007	a0013c0007t0007g0017 a0013c0007t0007g0017	1	185	0.0054	-1	c.31 others(6): Show c.3107delG		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					3053		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141593965	CA CA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18968.hp2 NA18968.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	185	0.0054	-1	c.32 others(6): Show c.3258delA		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					3204		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141594067	AT AT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01168.hp2 HG01168.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	185	0.0054	-1	c.33 others(6): Show c.3360delT		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					3306		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141594098	TA TA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18968.hp2 NA18968.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	185	0.0054	-1	c.33 others(6): Show c.3391delA		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					3337		chrX	TogoVar
SPANXA2_chrX_141584708_141595762	141594115	TC TC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18968.hp2 NA18968.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	185	0.0054	-1	c.34 others(6): Show c.3408delC		SPANXA2	ENSG00000203926.5	transcript	ENST00000370518.4	protein_coding					3354		chrX	TogoVar

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