Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SPANXN1_chrX_145242503_145261208	145249653	TG TG	T T	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01884.hp2 HG01934.hp1 others(18): Show HG01109.hp1 HG01884.hp2 HG01934.hp1 HG02145.hp1 HG02258.hp1 HG02451.hp2 HG02559.hp2 HG02647.hp1 HG02965.hp1 HG02970.hp1 HG02976.hp2 HG03130.hp1 HG03139.hp1 HG03453.hp2 HG03486.hp1 HG03579.hp1 HG06807.hp1 NA19030.hp2 NA19043.hp1 NA20129.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0007 a0001c0003t0003 a0001c0003t0004 a0001c0001t0007 a0001c0003t0003 a0001c0003t0004	a0001c0001t0007g0064 a0001c0001t0007g0067 a0001c0003t0003g0005 others(6): Show a0001c0001t0007g0064 a0001c0001t0007g0067 a0001c0003t0003g0005 a0001c0003t0003g0063 a0001c0003t0003g0065 a0001c0003t0003g0066 a0001c0003t0003g0100 a0001c0003t0003g0101 a0001c0003t0004g0027	21	334	0.0629	-1	c.75+ others(8): Show c.75+1994delG	SPANXN1	ENSG00000203923.5	transcript	ENST00000370493.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chrX	TogoVar
SPANXN1_chrX_145242503_145261208	145254013	AG AG	A A	intron_variant intron_variant	MODIFIER	NA19059.hp2 NA19059.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0071 a0001c0002t0002g0071	1	334	0.0030	-1	c.76- others(8): Show c.76-1653delG	SPANXN1	ENSG00000203923.5	transcript	ENST00000370493.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chrX	TogoVar
SPANXN1_chrX_145242503_145261208	145254030	AC AC	A A	intron_variant intron_variant	MODIFIER	NA19059.hp2 NA19059.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0071 a0001c0002t0002g0071	1	334	0.0030	-1	c.76- others(8): Show c.76-1639delC	SPANXN1	ENSG00000203923.5	transcript	ENST00000370493.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chrX	TogoVar
SPANXN1_chrX_145242503_145261208	145254094	TC TC	T T	intron_variant intron_variant	MODIFIER	NA19059.hp2 NA19059.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0071 a0001c0002t0002g0071	1	334	0.0030	-1	c.76- others(8): Show c.76-1575delC	SPANXN1	ENSG00000203923.5	transcript	ENST00000370493.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chrX	TogoVar
SPANXN1_chrX_145242503_145261208	145254510	TC TC	T T	intron_variant intron_variant	MODIFIER	NA19059.hp2 NA19059.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0071 a0001c0002t0002g0071	1	334	0.0030	-1	c.76- others(8): Show c.76-1159delC	SPANXN1	ENSG00000203923.5	transcript	ENST00000370493.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chrX	TogoVar
SPANXN1_chrX_145242503_145261208	145254622	AG AG	A A	intron_variant intron_variant	MODIFIER	NA19059.hp2 NA19059.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0071 a0001c0002t0002g0071	1	334	0.0030	-1	c.76- others(8): Show c.76-1047delG	SPANXN1	ENSG00000203923.5	transcript	ENST00000370493.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chrX	TogoVar
SPANXN1_chrX_145242503_145261208	145254761	GA GA	G G	intron_variant intron_variant	MODIFIER	NA19059.hp2 NA19059.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0071 a0001c0002t0002g0071	1	334	0.0030	-1	c.76- others(7): Show c.76-909delA	SPANXN1	ENSG00000203923.5	transcript	ENST00000370493.4	protein_coding	1/1			chrX	TogoVar
SPANXN1_chrX_145242503_145261208	145255173	TG TG	T T	intron_variant intron_variant	MODIFIER	NA19059.hp2 NA19059.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0071 a0001c0002t0002g0071	1	334	0.0030	-1	c.76- others(7): Show c.76-494delG	SPANXN1	ENSG00000203923.5	transcript	ENST00000370493.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chrX	TogoVar
SPANXN1_chrX_145242503_145261208	145255512	TC TC	T T	intron_variant intron_variant	MODIFIER	NA19059.hp2 NA19059.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0071 a0001c0002t0002g0071	1	334	0.0030	-1	c.76- others(7): Show c.76-155delC	SPANXN1	ENSG00000203923.5	transcript	ENST00000370493.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chrX	TogoVar
SPANXN1_chrX_145242503_145261208	145255595	GC GC	G G	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG01257.hp2 HG02040.hp1 others(29): Show HG00544.hp1 HG01257.hp2 HG02040.hp1 HG02257.hp1 HG02280.hp2 HG02630.hp1 HG02735.hp1 HG02895.hp1 HG02897.hp2 HG02922.hp2 HG03239.hp2 HG03540.hp1 HG03669.hp2 HG03834.hp2 HG03927.hp1 HG04184.hp1 NA18906.hp1 NA18946.hp2 NA18954.hp1 NA18972.hp2 NA18988.hp1 NA19003.hp1 NA19007.hp1 NA19010.hp2 NA19057.hp2 NA19059.hp2 NA19068.hp1 NA19070.hp1 NA19075.hp1 NA19084.hp1 NA19085.hp1 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0001t0004 a0001c0002t0002 others(1): Show a0001c0001t0003 a0001c0001t0004 a0001c0002t0002 a0001c0002t0004	a0001c0001t0003g0092 a0001c0001t0004g0022 a0001c0001t0004g0035 others(10): Show a0001c0001t0003g0092 a0001c0001t0004g0022 a0001c0001t0004g0035 a0001c0001t0004g0036 a0001c0001t0004g0037 a0001c0001t0004g0038 a0001c0001t0004g0090 a0001c0002t0002g0003 a0001c0002t0002g0023 a0001c0002t0002g0071 a0001c0002t0002g0088 a0001c0002t0002g0105 a0001c0002t0004g0049	32	334	0.0958	-1	c.76- others(6): Show c.76-70delC	SPANXN1	ENSG00000203923.5	transcript	ENST00000370493.4	protein_coding	1/1		INFO_REALIGN_3_PRIME	chrX	TogoVar
SPANXN1_chrX_145242503_145261208	145256389	GA GA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0020 a0001c0001t0001g0020	1	334	0.0030	-1	c.57 others(5): Show c.576delA	SPANXN1	ENSG00000203923.5	transcript	ENST00000370493.4	protein_coding		182		chrX	TogoVar
SPANXN1_chrX_145242503_145261208	145256753	TC TC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19003.hp1 NA19003.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0003 a0001c0002t0002g0003	1	334	0.0030	-1	c.94 others(5): Show c.940delC	SPANXN1	ENSG00000203923.5	transcript	ENST00000370493.4	protein_coding		546		chrX	TogoVar
SPANXN1_chrX_145242503_145261208	145256945	CA CA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01891.hp1 NA19010.hp1 HG01891.hp1 NA19010.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0002 a0001c0001t0001 a0001c0003t0002	a0001c0001t0001g0001 a0001c0003t0002g0041 a0001c0001t0001g0001 a0001c0003t0002g0041	2	334	0.0060	-1	c.11 others(6): Show c.1132delA	SPANXN1	ENSG00000203923.5	transcript	ENST00000370493.4	protein_coding		738		chrX	TogoVar
SPANXN1_chrX_145242503_145261208	145257110	TA TA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00639.hp1 HG01496.hp1 others(17): Show HG00099.hp1 HG00639.hp1 HG01496.hp1 HG01496.hp2 HG01516.hp2 HG02056.hp1 HG02165.hp1 HG02273.hp2 HG03041.hp2 HG03239.hp1 HG03704.hp1 HG03704.hp2 NA18747.hp1 NA18942.hp1 NA18954.hp2 NA18959.hp1 NA18962.hp1 NA18982.hp1 NA19072.hp1 NA19086.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0008 a0001c0001t0001 a0001c0001t0008	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0008 others(9): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0013 a0001c0001t0001g0019 a0001c0001t0001g0053 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0008g0084 a0001c0001t0008g0085	20	334	0.0599	-1	c.12 others(6): Show c.1297delA	SPANXN1	ENSG00000203923.5	transcript	ENST00000370493.4	protein_coding		903		chrX	TogoVar
SPANXN1_chrX_145242503_145261208	145258152	CA CA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(267): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00673.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG00741.hp2 HG01069.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01123.hp2 HG01167.hp1 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01243.hp1 HG01255.hp1 HG01256.hp1 HG01257.hp1 HG01258.hp1 HG01261.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01361.hp2 HG01433.hp1 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp2 HG01928.hp1 HG01943.hp1 HG01952.hp1 HG01975.hp1 HG01975.hp2 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02027.hp1 HG02055.hp1 HG02056.hp1 HG02071.hp1 HG02074.hp1 HG02080.hp1 HG02080.hp2 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02148.hp1 HG02148.hp2 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02451.hp1 HG02486.hp1 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp1 HG02630.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02717.hp1 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp1 HG02886.hp1 HG02895.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG03017.hp1 HG03041.hp2 HG03195.hp1 HG03195.hp2 HG03225.hp1 HG03239.hp1 HG03453.hp1 HG03471.hp1 HG03486.hp2 HG03490.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03540.hp1 HG03540.hp2 HG03654.hp1 HG03669.hp1 HG03704.hp1 HG03704.hp2 HG03710.hp1 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp2 HG04199.hp1 HG04228.hp1 HG06807.hp2 NA18522.hp1 NA18612.hp1 NA18747.hp1 NA18906.hp1 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18946.hp1 NA18948.hp1 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18951.hp2 NA18952.hp1 NA18954.hp2 NA18955.hp1 NA18956.hp1 NA18956.hp2 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18962.hp1 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp1 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18972.hp1 NA18974.hp1 NA18975.hp1 NA18975.hp2 NA18977.hp1 NA18979.hp1 NA18979.hp2 NA18980.hp1 NA18980.hp2 NA18982.hp1 NA18983.hp1 NA18984.hp1 NA18985.hp1 NA18986.hp1 NA18989.hp1 NA18990.hp1 NA18991.hp1 NA18991.hp2 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18995.hp1 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA18999.hp2 NA19000.hp1 NA19002.hp1 NA19002.hp2 NA19003.hp2 NA19004.hp1 NA19005.hp1 NA19006.hp1 NA19009.hp1 NA19010.hp1 NA19012.hp1 NA19030.hp1 NA19055.hp1 NA19056.hp1 NA19057.hp1 NA19058.hp1 NA19059.hp1 NA19059.hp2 NA19060.hp1 NA19062.hp1 NA19063.hp1 NA19064.hp1 NA19064.hp2 NA19066.hp1 NA19067.hp1 NA19072.hp1 NA19074.hp1 NA19074.hp2 NA19076.hp1 NA19077.hp1 NA19077.hp2 NA19079.hp1 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19083.hp1 NA19084.hp1 NA19084.hp2 NA19086.hp1 NA19089.hp2 NA19091.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(9): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 a0001c0002t0011	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(78): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0045 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0086 a0001c0001t0001g0089 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0104 a0001c0001t0001g0106 a0001c0001t0003g0092 a0001c0001t0004g0022 a0001c0001t0004g0035 a0001c0001t0004g0036 a0001c0001t0004g0037 a0001c0001t0004g0038 a0001c0001t0004g0039 a0001c0001t0004g0090 a0001c0001t0005g0001 a0001c0001t0007g0064 a0001c0001t0007g0067 a0001c0001t0007g0102 a0001c0001t0008g0084 a0001c0001t0008g0085 a0001c0001t0009g0006 a0001c0001t0010g0001 a0001c0002t0001g0011 a0001c0002t0001g0056 a0001c0002t0001g0097 a0001c0002t0002g0071 a0001c0002t0004g0049 a0001c0002t0011g0096	270	334	0.8084	-1	c.23 others(6): Show c.2339delA	SPANXN1	ENSG00000203923.5	transcript	ENST00000370493.4	protein_coding		1945		chrX	TogoVar
SPANXN1_chrX_145242503_145261208	145259597	TA TA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19089.hp2 NA19089.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	334	0.0030	-1	c.37 others(6): Show c.3784delA	SPANXN1	ENSG00000203923.5	transcript	ENST00000370493.4	protein_coding		3390		chrX	TogoVar
SPANXN1_chrX_145242503_145261208	145259664	TA TA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19075.hp1 NA19075.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0003 a0001c0002t0002g0003	1	334	0.0030	-1	c.38 others(6): Show c.3851delA	SPANXN1	ENSG00000203923.5	transcript	ENST00000370493.4	protein_coding		3457		chrX	TogoVar
SPANXN1_chrX_145242503_145261208	145260419	GT GT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19059.hp1 NA19059.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	334	0.0030	-1	c.46 others(6): Show c.4606delT	SPANXN1	ENSG00000203923.5	transcript	ENST00000370493.4	protein_coding		4212		chrX	TogoVar
SPANXN1_chrX_145242503_145261208	145260569	AT AT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19089.hp2 NA19089.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	334	0.0030	-1	c.47 others(6): Show c.4756delT	SPANXN1	ENSG00000203923.5	transcript	ENST00000370493.4	protein_coding		4362		chrX	TogoVar
SPANXN1_chrX_145242503_145261208	145260857	TC TC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19089.hp2 NA19089.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	334	0.0030	-1	c.50 others(6): Show c.5044delC	SPANXN1	ENSG00000203923.5	transcript	ENST00000370493.4	protein_coding		4650		chrX	TogoVar
SPANXN1_chrX_145242503_145261208	145260960	GT GT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00544.hp1 HG01109.hp1 HG01123.hp1 others(52): Show HG00544.hp1 HG01109.hp1 HG01123.hp1 HG01257.hp2 HG01884.hp1 HG01891.hp2 HG01934.hp1 HG02040.hp1 HG02145.hp1 HG02258.hp1 HG02451.hp2 HG02559.hp2 HG02572.hp1 HG02622.hp2 HG02647.hp1 HG02735.hp1 HG02818.hp2 HG02886.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02965.hp1 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03209.hp1 HG03239.hp2 HG03453.hp2 HG03486.hp1 HG03579.hp1 HG03834.hp2 HG03927.hp1 HG04184.hp1 HG06807.hp1 NA18906.hp2 NA18946.hp2 NA18954.hp1 NA18972.hp2 NA18988.hp1 NA19003.hp1 NA19007.hp1 NA19010.hp2 NA19030.hp2 NA19043.hp1 NA19057.hp2 NA19059.hp2 NA19068.hp1 NA19070.hp1 NA19075.hp1 NA19085.hp1 NA19088.hp1 NA20129.hp1 NA21309.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0001c0003 a0001c0004 others(2): Show a0001c0002 a0001c0003 a0001c0004 a0001c0005 a0002c0006	a0001c0002t0002 a0001c0002t0006 a0001c0002t0013 others(5): Show a0001c0002t0002 a0001c0002t0006 a0001c0002t0013 a0001c0003t0003 a0001c0003t0004 a0001c0004t0004 a0001c0005t0004 a0002c0006t0014	a0001c0002t0002g0003 a0001c0002t0002g0023 a0001c0002t0002g0046 others(21): Show a0001c0002t0002g0003 a0001c0002t0002g0023 a0001c0002t0002g0046 a0001c0002t0002g0055 a0001c0002t0002g0071 a0001c0002t0002g0105 a0001c0002t0006g0032 a0001c0002t0006g0043 a0001c0002t0006g0091 a0001c0002t0006g0093 a0001c0002t0013g0040 a0001c0003t0003g0005 a0001c0003t0003g0063 a0001c0003t0003g0065 a0001c0003t0003g0066 a0001c0003t0003g0100 a0001c0003t0003g0101 a0001c0003t0004g0027 a0001c0003t0004g0042 a0001c0004t0004g0087 a0001c0004t0004g0098 a0001c0004t0004g0099 a0001c0005t0004g0060 a0002c0006t0014g0044	55	334	0.1647	-1	c.51 others(6): Show c.5147delT	SPANXN1	ENSG00000203923.5	transcript	ENST00000370493.4	protein_coding		4753		chrX	TogoVar
SPANXN1_chrX_145242503_145261208	145261186	AC AC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19089.hp2 NA19089.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	334	0.0030	-1	c.53 others(6): Show c.5373delC	SPANXN1	ENSG00000203923.5	transcript	ENST00000370493.4	protein_coding		4979		chrX	TogoVar
SPANXN2_chrX_143706955_143725752	143707008	TG TG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01123.hp2 HG01167.hp1 HG01169.hp2 others(9): Show HG01123.hp2 HG01167.hp1 HG01169.hp2 HG02280.hp2 HG02647.hp1 HG02717.hp1 HG02723.hp2 HG02970.hp2 HG03209.hp1 HG03453.hp1 HG03516.hp1 HG03540.hp1	a0001 a0002 a0001 a0002	a0001c0004 a0002c0005 a0001c0004 a0002c0005	a0001c0004t0001 a0002c0005t0001 a0001c0004t0001 a0002c0005t0001	a0001c0004t0001g0102 a0002c0005t0001g0015 a0002c0005t0001g0016 others(4): Show a0001c0004t0001g0102 a0002c0005t0001g0015 a0002c0005t0001g0016 a0002c0005t0001g0018 a0002c0005t0001g0034 a0002c0005t0001g0035 a0002c0005t0001g0036	12	336	0.0357	-1	c.50 others(6): Show c.5026delC	SPANXN2	ENSG00000268988.2	transcript	ENST00000598475.2	protein_coding		4946		chrX	TogoVar
SPANXN2_chrX_143706955_143725752	143707138	GC GC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0001 a0006c0007t0001	a0006c0007t0001g0087 a0006c0007t0001g0087	1	336	0.0030	-1	c.48 others(6): Show c.4896delG	SPANXN2	ENSG00000268988.2	transcript	ENST00000598475.2	protein_coding		4816		chrX	TogoVar
SPANXN2_chrX_143706955_143725752	143707151	TG TG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0001 a0006c0007t0001	a0006c0007t0001g0087 a0006c0007t0001g0087	1	336	0.0030	-1	c.48 others(6): Show c.4883delC	SPANXN2	ENSG00000268988.2	transcript	ENST00000598475.2	protein_coding		4803		chrX	TogoVar
SPANXN2_chrX_143706955_143725752	143707430	GA GA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0001 a0006c0007t0001	a0006c0007t0001g0087 a0006c0007t0001g0087	1	336	0.0030	-1	c.46 others(6): Show c.4604delT	SPANXN2	ENSG00000268988.2	transcript	ENST00000598475.2	protein_coding		4524		chrX	TogoVar
SPANXN2_chrX_143706955_143725752	143707439	TA TA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0001 a0006c0007t0001	a0006c0007t0001g0087 a0006c0007t0001g0087	1	336	0.0030	-1	c.45 others(6): Show c.4595delT	SPANXN2	ENSG00000268988.2	transcript	ENST00000598475.2	protein_coding		4515		chrX	TogoVar
SPANXN2_chrX_143706955_143725752	143707482	AC AC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0001 a0006c0007t0001	a0006c0007t0001g0087 a0006c0007t0001g0087	1	336	0.0030	-1	c.45 others(6): Show c.4552delG	SPANXN2	ENSG00000268988.2	transcript	ENST00000598475.2	protein_coding		4472		chrX	TogoVar
SPANXN2_chrX_143706955_143725752	143707813	CA CA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0001 a0006c0007t0001	a0006c0007t0001g0087 a0006c0007t0001g0087	1	336	0.0030	-1	c.42 others(6): Show c.4221delT	SPANXN2	ENSG00000268988.2	transcript	ENST00000598475.2	protein_coding		4141		chrX	TogoVar
SPANXN2_chrX_143706955_143725752	143708796	AG AG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0001 a0006c0007t0001	a0006c0007t0001g0087 a0006c0007t0001g0087	1	336	0.0030	-1	c.32 others(6): Show c.3238delC	SPANXN2	ENSG00000268988.2	transcript	ENST00000598475.2	protein_coding		3158		chrX	TogoVar
SPANXN2_chrX_143706955_143725752	143708940	CT CT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0001 a0006c0007t0001	a0006c0007t0001g0087 a0006c0007t0001g0087	1	336	0.0030	-1	c.30 others(6): Show c.3094delA	SPANXN2	ENSG00000268988.2	transcript	ENST00000598475.2	protein_coding		3014		chrX	TogoVar
SPANXN2_chrX_143706955_143725752	143708950	AG AG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19077.hp1 NA19077.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0003 a0001c0003t0001g0003	1	336	0.0030	-1	c.30 others(6): Show c.3084delC	SPANXN2	ENSG00000268988.2	transcript	ENST00000598475.2	protein_coding		3004		chrX	TogoVar
SPANXN2_chrX_143706955_143725752	143709063	TC TC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0001 a0006c0007t0001	a0006c0007t0001g0087 a0006c0007t0001g0087	1	336	0.0030	-1	c.29 others(6): Show c.2971delG	SPANXN2	ENSG00000268988.2	transcript	ENST00000598475.2	protein_coding		2891		chrX	TogoVar
SPANXN2_chrX_143706955_143725752	143709289	CA CA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0001 a0006c0007t0001	a0006c0007t0001g0087 a0006c0007t0001g0087	1	336	0.0030	-1	c.27 others(6): Show c.2745delT	SPANXN2	ENSG00000268988.2	transcript	ENST00000598475.2	protein_coding		2665		chrX	TogoVar
SPANXN2_chrX_143706955_143725752	143709297	CA CA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0001 a0006c0007t0001	a0006c0007t0001g0087 a0006c0007t0001g0087	1	336	0.0030	-1	c.27 others(6): Show c.2737delT	SPANXN2	ENSG00000268988.2	transcript	ENST00000598475.2	protein_coding		2657		chrX	TogoVar
SPANXN2_chrX_143706955_143725752	143709333	AT AT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19075.hp1 NA19075.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0002 a0001c0002t0001g0002	1	336	0.0030	-1	c.27 others(6): Show c.2701delA	SPANXN2	ENSG00000268988.2	transcript	ENST00000598475.2	protein_coding		2621		chrX	TogoVar
SPANXN2_chrX_143706955_143725752	143709461	AT AT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0001 a0006c0007t0001	a0006c0007t0001g0087 a0006c0007t0001g0087	1	336	0.0030	-1	c.25 others(6): Show c.2573delA	SPANXN2	ENSG00000268988.2	transcript	ENST00000598475.2	protein_coding		2493		chrX	TogoVar
SPANXN2_chrX_143706955_143725752	143709666	TA TA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0001 a0006c0007t0001	a0006c0007t0001g0087 a0006c0007t0001g0087	1	336	0.0030	-1	c.23 others(6): Show c.2368delT	SPANXN2	ENSG00000268988.2	transcript	ENST00000598475.2	protein_coding		2288		chrX	TogoVar
SPANXN2_chrX_143706955_143725752	143709906	AT AT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0001 a0006c0007t0001	a0006c0007t0001g0087 a0006c0007t0001g0087	1	336	0.0030	-1	c.21 others(6): Show c.2128delA	SPANXN2	ENSG00000268988.2	transcript	ENST00000598475.2	protein_coding		2048		chrX	TogoVar
SPANXN2_chrX_143706955_143725752	143709982	CA CA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19075.hp1 NA19075.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0002 a0001c0002t0001g0002	1	336	0.0030	-1	c.20 others(6): Show c.2052delT	SPANXN2	ENSG00000268988.2	transcript	ENST00000598475.2	protein_coding		1972		chrX	TogoVar
SPANXN2_chrX_143706955_143725752	143710396	AT AT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0001 a0006c0007t0001	a0006c0007t0001g0087 a0006c0007t0001g0087	1	336	0.0030	-1	c.16 others(6): Show c.1638delA	SPANXN2	ENSG00000268988.2	transcript	ENST00000598475.2	protein_coding		1558		chrX	TogoVar
SPANXN2_chrX_143706955_143725752	143710462	CA CA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0001 a0006c0007t0001	a0006c0007t0001g0087 a0006c0007t0001g0087	1	336	0.0030	-1	c.15 others(6): Show c.1572delT	SPANXN2	ENSG00000268988.2	transcript	ENST00000598475.2	protein_coding		1492		chrX	TogoVar
SPANXN2_chrX_143706955_143725752	143710590	CA CA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19075.hp1 NA19075.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0002 a0001c0002t0001g0002	1	336	0.0030	-1	c.14 others(6): Show c.1444delT	SPANXN2	ENSG00000268988.2	transcript	ENST00000598475.2	protein_coding		1364		chrX	TogoVar
SPANXN2_chrX_143706955_143725752	143710619	AT AT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0001 a0006c0007t0001	a0006c0007t0001g0087 a0006c0007t0001g0087	1	336	0.0030	-1	c.14 others(6): Show c.1415delA	SPANXN2	ENSG00000268988.2	transcript	ENST00000598475.2	protein_coding		1335		chrX	TogoVar
SPANXN2_chrX_143706955_143725752	143710799	CA CA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0001 a0006c0007t0001	a0006c0007t0001g0087 a0006c0007t0001g0087	1	336	0.0030	-1	c.12 others(6): Show c.1235delT	SPANXN2	ENSG00000268988.2	transcript	ENST00000598475.2	protein_coding		1155		chrX	TogoVar
SPANXN2_chrX_143706955_143725752	143710817	TA TA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0001 a0006c0007t0001	a0006c0007t0001g0087 a0006c0007t0001g0087	1	336	0.0030	-1	c.12 others(6): Show c.1217delT	SPANXN2	ENSG00000268988.2	transcript	ENST00000598475.2	protein_coding		1137		chrX	TogoVar
SPANXN2_chrX_143706955_143725752	143710960	AT AT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0001 a0006c0007t0001	a0006c0007t0001g0087 a0006c0007t0001g0087	1	336	0.0030	-1	c.10 others(6): Show c.1074delA	SPANXN2	ENSG00000268988.2	transcript	ENST00000598475.2	protein_coding		994		chrX	TogoVar
SPANXN2_chrX_143706955_143725752	143711550	AT AT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00423.hp1 HG00438.hp2 HG00735.hp1 others(49): Show HG00423.hp1 HG00438.hp2 HG00735.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01346.hp2 HG01978.hp2 HG02040.hp1 HG02083.hp1 HG02129.hp1 HG02148.hp2 HG02155.hp1 HG02165.hp1 HG02257.hp1 HG02273.hp2 HG02486.hp1 HG02622.hp1 HG02735.hp1 HG03669.hp2 HG03942.hp1 NA18943.hp1 NA18953.hp1 NA18961.hp1 NA18965.hp1 NA18967.hp1 NA18969.hp1 NA18979.hp2 NA18981.hp2 NA18982.hp1 NA18986.hp1 NA18989.hp1 NA18990.hp1 NA18992.hp2 NA18993.hp1 NA18997.hp2 NA18999.hp1 NA19002.hp1 NA19004.hp1 NA19009.hp1 NA19054.hp2 NA19055.hp1 NA19057.hp1 NA19062.hp1 NA19063.hp1 NA19074.hp2 NA19077.hp1 NA19080.hp1 NA19084.hp1 NA19090.hp1 NA21309.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0002c0005	a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 others(1): Show a0001c0001t0001 a0001c0002t0001 a0001c0003t0001 a0002c0005t0001	a0001c0001t0001g0001 a0001c0002t0001g0002 a0001c0002t0001g0091 others(16): Show a0001c0001t0001g0001 a0001c0002t0001g0002 a0001c0002t0001g0091 a0001c0003t0001g0003 a0001c0003t0001g0013 a0001c0003t0001g0021 a0001c0003t0001g0024 a0001c0003t0001g0032 a0001c0003t0001g0038 a0001c0003t0001g0066 a0001c0003t0001g0067 a0001c0003t0001g0093 a0001c0003t0001g0095 a0001c0003t0001g0097 a0001c0003t0001g0099 a0001c0003t0001g0100 a0001c0003t0001g0104 a0002c0005t0001g0033 a0002c0005t0001g0035	52	336	0.1548	-1	c.48 others(5): Show c.484delA	SPANXN2	ENSG00000268988.2	transcript	ENST00000598475.2	protein_coding		404		chrX	TogoVar
SPANXN2_chrX_143706955_143725752	143711570	AC AC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0001 a0006c0007t0001	a0006c0007t0001g0087 a0006c0007t0001g0087	1	336	0.0030	-1	c.46 others(5): Show c.464delG	SPANXN2	ENSG00000268988.2	transcript	ENST00000598475.2	protein_coding		384		chrX	TogoVar
SPANXN2_chrX_143706955_143725752	143711638	TC TC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0006 a0006	a0006c0007 a0006c0007	a0006c0007t0001 a0006c0007t0001	a0006c0007t0001g0087 a0006c0007t0001g0087	1	336	0.0030	-1	c.39 others(5): Show c.396delG	SPANXN2	ENSG00000268988.2	transcript	ENST00000598475.2	protein_coding		316		chrX	TogoVar

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