view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SPARCL1_chr4_87468335_87534376 | 87472078 | CA | C | downstream_gene_variant | MODIFIER | HG00280.hp2 HG00323.hp1 HG00323.hp2 others(53): Show |
a0001a0002 | a0001c0002a0001c0003a0001c0008others(1): Show | a0001c0002t0001a0001c0003t0001a0001c0008t0001others(2): Show | a0001c0002t0001g0036 a0001c0002t0001g0037 a0001c0002t0001g0084 others(52): Show |
56 | 390 | 0.1436 | -1 | c.*16 others(6): Show |
SPARCL1 | ENSG00000152583.13 | transcript | ENST00000282470.11 | protein_coding | 1256 | chr4 | TogoVar | |||||||
SPARCL1_chr4_87468335_87534376 | 87474399 | AT | A | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00280.hp2 others(242): Show |
a0001a0002a0003others(6): Show | a0001c0002a0001c0003a0001c0006others(11): Show | a0001c0002t0001a0001c0002t0002a0001c0002t0003others(25): Show | a0001c0002t0001g0001 a0001c0002t0001g0002 a0001c0002t0001g0004 others(230): Show |
245 | 390 | 0.6282 | -1 | c.196 others(9): Show |
SPARCL1 | ENSG00000152583.13 | transcript | ENST00000282470.11 | protein_coding | 10/10 | chr4 | TogoVar | |||||||
SPARCL1_chr4_87468335_87534376 | 87474743 | CT | C | intron_variant | MODIFIER | HG02572.hp2 HG02809.hp1 NA18522.hp2 others(4): Show |
a0001a0002a0003 | a0001c0002a0002c0001a0003c0004 | a0001c0002t0001a0002c0001t0001a0003c0004t0001 | a0001c0002t0001g0221 a0002c0001t0001g0074 a0002c0001t0001g0075 others(3): Show |
7 | 390 | 0.0180 | -1 | c.196 others(9): Show |
SPARCL1 | ENSG00000152583.13 | transcript | ENST00000282470.11 | protein_coding | 10/10 | chr4 | TogoVar | |||||||
SPARCL1_chr4_87468335_87534376 | 87478439 | AT | A | intron_variant | MODIFIER | HG01099.hp2 HG01192.hp1 HG01243.hp1 others(31): Show |
a0001a0002a0003 | a0001c0002a0001c0006a0002c0001others(1): Show | a0001c0002t0001a0001c0006t0001a0002c0001t0001others(4): Show | a0001c0002t0001g0029 a0001c0006t0001g0087 a0002c0001t0001g0072 others(28): Show |
34 | 390 | 0.0872 | -1 | c.196 others(9): Show |
SPARCL1 | ENSG00000152583.13 | transcript | ENST00000282470.11 | protein_coding | 10/10 | chr4 | TogoVar | |||||||
SPARCL1_chr4_87468335_87534376 | 87480031 | CT | C | intron_variant | MODIFIER | HG00423.hp2 HG00438.hp2 HG00639.hp1 others(71): Show |
a0003a0004a0006others(1): Show | a0003c0004a0003c0011a0004c0005others(2): Show | a0003c0004t0001a0003c0004t0002a0003c0004t0003others(8): Show | a0003c0004t0001g0005 a0003c0004t0001g0019 a0003c0004t0001g0082 others(70): Show |
74 | 390 | 0.1897 | -1 | c.181 others(9): Show |
SPARCL1 | ENSG00000152583.13 | transcript | ENST00000282470.11 | protein_coding | 9/10 | chr4 | TogoVar | |||||||
SPARCL1_chr4_87468335_87534376 | 87480820 | CT | C | intron_variant | MODIFIER | HG00597.hp2 HG01069.hp1 HG01167.hp2 others(13): Show |
a0001a0002 | a0001c0002a0001c0003a0002c0001 | a0001c0002t0001a0001c0003t0001a0002c0001t0001others(2): Show | a0001c0002t0001g0027 a0001c0002t0001g0142 a0001c0002t0001g0163 others(13): Show |
16 | 390 | 0.0410 | -1 | c.166 others(9): Show |
SPARCL1 | ENSG00000152583.13 | transcript | ENST00000282470.11 | protein_coding | 8/10 | chr4 | TogoVar | |||||||
SPARCL1_chr4_87468335_87534376 | 87483083 | GT | G | intron_variant | MODIFIER | HG00280.hp2 HG00323.hp1 HG00323.hp2 others(168): Show |
a0001a0002a0003others(2): Show | a0001c0003a0001c0006a0002c0001others(4): Show | a0001c0003t0001a0001c0003t0002a0001c0003t0003others(15): Show | a0001c0003t0001g0008 a0001c0003t0001g0009 a0001c0003t0001g0118 others(161): Show |
171 | 390 | 0.4385 | -1 | c.153 others(9): Show |
SPARCL1 | ENSG00000152583.13 | transcript | ENST00000282470.11 | protein_coding | 7/10 | chr4 | TogoVar | |||||||
SPARCL1_chr4_87468335_87534376 | 87485521 | AT | A | intron_variant | MODIFIER | HG00423.hp2 HG00438.hp2 HG00639.hp1 others(88): Show |
a0001a0002a0003others(3): Show | a0001c0003a0002c0001a0003c0004others(5): Show | a0001c0003t0001a0001c0003t0002a0002c0001t0001others(13): Show | a0001c0003t0001g0208 a0001c0003t0002g0274 a0001c0003t0002g0275 others(86): Show |
91 | 390 | 0.2333 | -1 | c.153 others(10): Show |
SPARCL1 | ENSG00000152583.13 | transcript | ENST00000282470.11 | protein_coding | 7/10 | chr4 | TogoVar | |||||||
SPARCL1_chr4_87468335_87534376 | 87486888 | CT | C | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00408.hp2 others(32): Show |
a0001a0003a0005others(1): Show | a0001c0002a0001c0003a0001c0008others(3): Show | a0001c0002t0001a0001c0002t0003a0001c0003t0006others(5): Show | a0001c0002t0001g0001 a0001c0002t0001g0006 a0001c0002t0001g0023 others(29): Show |
35 | 390 | 0.0897 | -1 | c.153 others(10): Show |
SPARCL1 | ENSG00000152583.13 | transcript | ENST00000282470.11 | protein_coding | 7/10 | chr4 | TogoVar | |||||||
SPARCL1_chr4_87468335_87534376 | 87488934 | TC | T | intron_variant | MODIFIER | HG00423.hp2 HG00438.hp2 HG00639.hp1 others(96): Show |
a0002a0003a0004others(2): Show | a0002c0001a0003c0004a0003c0011others(4): Show | a0002c0001t0001a0002c0001t0002a0003c0004t0001others(12): Show | a0002c0001t0001g0094 a0002c0001t0002g0003 a0002c0001t0002g0012 others(91): Show |
99 | 390 | 0.2539 | -1 | c.153 others(10): Show |
SPARCL1 | ENSG00000152583.13 | transcript | ENST00000282470.11 | protein_coding | 7/10 | chr4 | TogoVar | |||||||
SPARCL1_chr4_87468335_87534376 | 87491258 | TA | T | intron_variant | MODIFIER | HG00280.hp1 HG00544.hp2 HG00558.hp1 others(102): Show |
a0002a0009a0011 | a0002c0001a0002c0013a0009c0010others(1): Show | a0002c0001t0001a0002c0001t0002a0002c0001t0006others(3): Show | a0002c0001t0001g0067 a0002c0001t0001g0068 a0002c0001t0001g0069 others(101): Show |
105 | 390 | 0.2692 | -1 | c.129 others(9): Show |
SPARCL1 | ENSG00000152583.13 | transcript | ENST00000282470.11 | protein_coding | 5/10 | chr4 | TogoVar | |||||||
SPARCL1_chr4_87468335_87534376 | 87491944 | AC | A | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00408.hp2 others(77): Show |
a0001a0005a0007others(1): Show | a0001c0002a0005c0007a0007c0017others(1): Show | a0001c0002t0001a0001c0002t0002a0001c0002t0003others(3): Show | a0001c0002t0001g0001 a0001c0002t0001g0002 a0001c0002t0001g0004 others(71): Show |
80 | 390 | 0.2051 | -1 | c.121 others(9): Show |
SPARCL1 | ENSG00000152583.13 | transcript | ENST00000282470.11 | protein_coding | 4/10 | chr4 | TogoVar | |||||||
SPARCL1_chr4_87468335_87534376 | 87492417 | CA | C | intron_variant | MODIFIER | HG00639.hp1 HG01109.hp2 HG01167.hp1 others(48): Show |
a0001a0003a0004others(2): Show | a0001c0002a0001c0006a0003c0004others(5): Show | a0001c0002t0001a0001c0006t0001a0003c0004t0001others(10): Show | a0001c0002t0001g0020 a0001c0002t0001g0027 a0001c0006t0001g0086 others(46): Show |
51 | 390 | 0.1308 | -1 | c.121 others(9): Show |
SPARCL1 | ENSG00000152583.13 | transcript | ENST00000282470.11 | protein_coding | 4/10 | chr4 | TogoVar | |||||||
SPARCL1_chr4_87468335_87534376 | 87499895 | GA | G | intron_variant | MODIFIER | HG00280.hp1 HG00544.hp2 HG00558.hp1 others(134): Show |
a0002a0003a0004others(2): Show | a0002c0001a0002c0013a0003c0004others(4): Show | a0002c0001t0001a0002c0001t0002a0002c0001t0006others(9): Show | a0002c0001t0001g0067 a0002c0001t0001g0068 a0002c0001t0001g0069 others(129): Show |
137 | 390 | 0.3513 | -1 | c.-11 others(8): Show |
SPARCL1 | ENSG00000152583.13 | transcript | ENST00000282470.11 | protein_coding | 1/10 | chr4 | TogoVar | |||||||
SPARCL1_chr4_87468335_87534376 | 87501969 | AT | A | intron_variant | MODIFIER | HG00639.hp1 HG01884.hp1 HG01891.hp2 others(9): Show |
a0002a0003a0006 | a0002c0001a0003c0004a0006c0009 | a0002c0001t0001a0003c0004t0001a0003c0004t0002others(1): Show | a0002c0001t0001g0094 a0003c0004t0001g0019 a0003c0004t0001g0252 others(9): Show |
12 | 390 | 0.0308 | -1 | c.-11 others(9): Show |
SPARCL1 | ENSG00000152583.13 | transcript | ENST00000282470.11 | protein_coding | 1/10 | chr4 | TogoVar | |||||||
SPARCL1_chr4_87468335_87534376 | 87503681 | TC | T | intron_variant | MODIFIER | HG01070.hp1 HG01109.hp2 HG02145.hp2 others(4): Show |
a0002a0003 | a0002c0001a0003c0004a0003c0011 | a0002c0001t0001a0003c0004t0003a0003c0004t0004others(1): Show | a0002c0001t0001g0094 a0003c0004t0003g0122 a0003c0004t0004g0255 others(4): Show |
7 | 390 | 0.0180 | -1 | c.-11 others(9): Show |
SPARCL1 | ENSG00000152583.13 | transcript | ENST00000282470.11 | protein_coding | 1/10 | chr4 | TogoVar | |||||||
SPARCL1_chr4_87468335_87534376 | 87506817 | CT | C | intron_variant | MODIFIER | HG01167.hp1 HG02559.hp1 HG02622.hp2 others(4): Show |
a0003a0004 | a0003c0004a0004c0005 | a0003c0004t0001a0004c0005t0001 | a0003c0004t0001g0085 a0003c0004t0001g0089 a0003c0004t0001g0090 others(4): Show |
7 | 390 | 0.0180 | -1 | c.-11 others(9): Show |
SPARCL1 | ENSG00000152583.13 | transcript | ENST00000282470.11 | protein_coding | 1/10 | chr4 | TogoVar | |||||||
SPARCL1_chr4_87468335_87534376 | 87507455 | AT | A | intron_variant | MODIFIER | HG00280.hp1 HG00408.hp2 HG00423.hp2 others(222): Show |
a0001a0002a0003others(6): Show | a0001c0002a0001c0003a0002c0001others(8): Show | a0001c0002t0001a0001c0002t0002a0001c0002t0003others(16): Show | a0001c0002t0001g0001 a0001c0002t0001g0004 a0001c0002t0001g0020 others(217): Show |
225 | 390 | 0.5769 | -1 | c.-11 others(9): Show |
SPARCL1 | ENSG00000152583.13 | transcript | ENST00000282470.11 | protein_coding | 1/10 | chr4 | TogoVar | |||||||
SPARCL1_chr4_87468335_87534376 | 87507790 | AG | A | intron_variant | MODIFIER | HG02280.hp1 HG02922.hp1 HG02965.hp2 |
a0002 | a0002c0001 | a0002c0001t0002a0002c0001t0006 | a0002c0001t0002g0260 a0002c0001t0002g0261 a0002c0001t0006g0262 |
3 | 390 | 0.0077 | -1 | c.-11 others(9): Show |
SPARCL1 | ENSG00000152583.13 | transcript | ENST00000282470.11 | protein_coding | 1/10 | chr4 | TogoVar | |||||||
SPARCL1_chr4_87468335_87534376 | 87517312 | TA | T | intron_variant | MODIFIER | HG02896.hp2 NA19055.hp1 NA19072.hp1 |
a0001a0002a0003 | a0001c0002a0002c0001a0003c0004 | a0001c0002t0001a0002c0001t0002a0003c0004t0001 | a0001c0002t0001g0027 a0002c0001t0002g0303 a0003c0004t0001g0089 |
3 | 390 | 0.0077 | -1 | c.-12 others(10): Show |
SPARCL1 | ENSG00000152583.13 | transcript | ENST00000282470.11 | protein_coding | 1/10 | chr4 | TogoVar | |||||||
SPARCL1_chr4_87468335_87534376 | 87520246 | CA | C | intron_variant | MODIFIER | HG00140.hp1 HG01192.hp2 HG01256.hp1 others(5): Show |
a0001 | a0001c0002a0001c0003 | a0001c0002t0001a0001c0003t0001 | a0001c0002t0001g0002 a0001c0002t0001g0143 a0001c0002t0001g0147 others(3): Show |
8 | 390 | 0.0205 | -1 | c.-12 others(9): Show |
SPARCL1 | ENSG00000152583.13 | transcript | ENST00000282470.11 | protein_coding | 1/10 | chr4 | TogoVar | |||||||
SPARCL1_chr4_87468335_87534376 | 87520646 | AG | A | intron_variant | MODIFIER | HG02572.hp2 NA18522.hp2 NA18906.hp2 |
a0002 | a0002c0001 | a0002c0001t0001 | a0002c0001t0001g0074 a0002c0001t0001g0075 a0002c0001t0001g0076 |
3 | 390 | 0.0077 | -1 | c.-12 others(9): Show |
SPARCL1 | ENSG00000152583.13 | transcript | ENST00000282470.11 | protein_coding | 1/10 | chr4 | TogoVar | |||||||
SPARCL1_chr4_87468335_87534376 | 87524232 | CT | C | intron_variant | MODIFIER | HG01167.hp1 HG02258.hp2 HG02486.hp2 others(10): Show |
a0003a0004a0008 | a0003c0004a0004c0005a0008c0015 | a0003c0004t0001a0004c0005t0001a0008c0015t0001 | a0003c0004t0001g0005 a0003c0004t0001g0019 a0003c0004t0001g0082 others(9): Show |
13 | 390 | 0.0333 | -1 | c.-12 others(9): Show |
SPARCL1 | ENSG00000152583.13 | transcript | ENST00000282470.11 | protein_coding | 1/10 | chr4 | TogoVar | |||||||
SPARCL1_chr4_87468335_87534376 | 87525162 | CA | C | intron_variant | MODIFIER | HG02109.hp1 HG02809.hp1 HG03041.hp2 others(6): Show |
a0001a0003 | a0001c0002a0001c0003a0003c0004 | a0001c0002t0001a0001c0002t0002a0001c0003t0001others(2): Show | a0001c0002t0001g0020 a0001c0002t0002g0374 a0001c0003t0001g0179 others(5): Show |
9 | 390 | 0.0231 | -1 | c.-12 others(9): Show |
SPARCL1 | ENSG00000152583.13 | transcript | ENST00000282470.11 | protein_coding | 1/10 | chr4 | TogoVar | |||||||
SPARCL1_chr4_87468335_87534376 | 87525952 | CA | C | intron_variant | MODIFIER | HG00280.hp1 HG00544.hp2 HG00558.hp1 others(127): Show |
a0001a0002a0003others(4): Show | a0001c0002a0001c0003a0002c0001others(6): Show | a0001c0002t0002a0001c0003t0002a0001c0003t0006others(12): Show | a0001c0002t0002g0013 a0001c0003t0002g0274 a0001c0003t0002g0275 others(121): Show |
130 | 390 | 0.3333 | -1 | c.-12 others(9): Show |
SPARCL1 | ENSG00000152583.13 | transcript | ENST00000282470.11 | protein_coding | 1/10 | chr4 | TogoVar | |||||||
SPARCL1_chr4_87468335_87534376 | 87527257 | TG | T | intron_variant | MODIFIER | HG01109.hp2 HG02895.hp2 HG02897.hp2 others(2): Show |
a0003 | a0003c0004a0003c0011 | a0003c0004t0004a0003c0011t0004 | a0003c0004t0004g0255 a0003c0004t0004g0256 a0003c0004t0004g0258 others(2): Show |
5 | 390 | 0.0128 | -1 | c.-12 others(9): Show |
SPARCL1 | ENSG00000152583.13 | transcript | ENST00000282470.11 | protein_coding | 1/10 | chr4 | TogoVar | |||||||
SPARCL1_chr4_87468335_87534376 | 87533920 | AT | A | upstream_gene_variant | MODIFIER | HG01167.hp1 HG02145.hp2 HG02559.hp1 others(6): Show |
a0002a0003a0004 | a0002c0001a0003c0004a0004c0005 | a0002c0001t0001a0003c0004t0001a0003c0004t0003others(1): Show | a0002c0001t0001g0094 a0003c0004t0001g0085 a0003c0004t0001g0089 others(6): Show |
9 | 390 | 0.0231 | -1 | c.-48 others(6): Show |
SPARCL1 | ENSG00000152583.13 | transcript | ENST00000282470.11 | protein_coding | 4545 | chr4 | TogoVar | |||||||
SPARC_chr5_151656096_151691915 | 151656236 | TA | T | downstream_gene_variant | MODIFIER | HG00140.hp2 HG00639.hp1 HG01069.hp2 others(71): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(8): Show | a0001c0001t0001g0147 a0001c0001t0002g0034 a0001c0001t0002g0073 others(59): Show |
74 | 442 | 0.1674 | -1 | c.*73 others(6): Show |
SPARC | ENSG00000113140.11 | transcript | ENST00000231061.9 | protein_coding | 4859 | chr5 | TogoVar | |||||||
SPARC_chr5_151656096_151691915 | 151660604 | TG | T | downstream_gene_variant | MODIFIER | HG01243.hp2 HG01256.hp1 HG01258.hp2 others(12): Show |
a0001a0005 | a0001c0001a0001c0006a0005c0010 | a0001c0001t0002a0001c0001t0007a0001c0001t0028others(2): Show | a0001c0001t0002g0015 a0001c0001t0002g0016 a0001c0001t0002g0028 others(9): Show |
15 | 442 | 0.0339 | -1 | c.*29 others(6): Show |
SPARC | ENSG00000113140.11 | transcript | ENST00000231061.9 | protein_coding | 491 | chr5 | TogoVar | |||||||
SPARC_chr5_151656096_151691915 | 151660618 | TA | T | downstream_gene_variant | MODIFIER | HG01496.hp1 HG01884.hp1 HG02451.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0005a0001c0002t0006a0001c0002t0010 | a0001c0001t0005g0017 a0001c0002t0006g0142 a0001c0002t0006g0298 others(5): Show |
8 | 442 | 0.0181 | -1 | c.*29 others(6): Show |
SPARC | ENSG00000113140.11 | transcript | ENST00000231061.9 | protein_coding | 477 | chr5 | TogoVar | |||||||
SPARC_chr5_151656096_151691915 | 151680216 | CT | C | intron_variant | MODIFIER | HG00280.hp2 HG00323.hp2 HG00408.hp1 others(161): Show |
a0001a0004 | a0001c0001a0001c0002a0001c0005others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(15): Show | a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0009 others(115): Show |
164 | 442 | 0.3710 | -1 | c.-13 others(9): Show |
SPARC | ENSG00000113140.11 | transcript | ENST00000231061.9 | protein_coding | 1/9 | chr5 | TogoVar | |||||||
SPARC_chr5_151656096_151691915 | 151682033 | AG | A | intron_variant | MODIFIER | HG00642.hp2 HG00735.hp1 HG00738.hp1 others(34): Show |
a0001a0003 | a0001c0001a0001c0002a0003c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0129 a0001c0001t0001g0202 a0001c0001t0001g0230 others(29): Show |
37 | 442 | 0.0837 | -1 | c.-14 others(9): Show |
SPARC | ENSG00000113140.11 | transcript | ENST00000231061.9 | protein_coding | 1/9 | chr5 | TogoVar | |||||||
SPARC_chr5_151656096_151691915 | 151684196 | TC | T | intron_variant | MODIFIER | HG01257.hp1 HG01433.hp2 HG02109.hp2 others(11): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0006a0001c0002t0006 | a0001c0001t0006g0150 a0001c0002t0006g0003 a0001c0002t0006g0022 others(4): Show |
14 | 442 | 0.0317 | -1 | c.-14 others(9): Show |
SPARC | ENSG00000113140.11 | transcript | ENST00000231061.9 | protein_coding | 1/9 | chr5 | TogoVar | |||||||
SPARC_chr5_151656096_151691915 | 151684415 | CT | C | intron_variant | MODIFIER | HG00280.hp2 HG00323.hp2 HG00408.hp2 others(150): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0005others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(16): Show | a0001c0001t0001g0004 a0001c0001t0001g0013 a0001c0001t0001g0065 others(107): Show |
153 | 442 | 0.3462 | -1 | c.-14 others(9): Show |
SPARC | ENSG00000113140.11 | transcript | ENST00000231061.9 | protein_coding | 1/9 | chr5 | TogoVar | |||||||
SPARC_chr5_151656096_151691915 | 151684604 | GA | G | intron_variant | MODIFIER | HG00423.hp1 HG00438.hp1 HG01346.hp1 others(15): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0147 a0001c0001t0002g0073 a0001c0001t0002g0074 others(14): Show |
18 | 442 | 0.0407 | -1 | c.-14 others(9): Show |
SPARC | ENSG00000113140.11 | transcript | ENST00000231061.9 | protein_coding | 1/9 | chr5 | TogoVar | |||||||
SPARC_chr5_151656096_151691915 | 151688693 | AT | A | upstream_gene_variant | MODIFIER | HG01891.hp1 HG02055.hp2 HG02257.hp2 others(8): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0008others(1): Show | a0001c0001t0003a0001c0001t0005a0001c0001t0007others(6): Show | a0001c0001t0003g0259 a0001c0001t0005g0306 a0001c0001t0007g0144 others(7): Show |
11 | 442 | 0.0249 | -1 | c.-18 others(6): Show |
SPARC | ENSG00000113140.11 | transcript | ENST00000231061.9 | protein_coding | 1779 | chr5 | TogoVar | |||||||
SPART_chr13_36296638_36351394 | 36300230 | AT | A | downstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00323.hp2 others(110): Show |
a0001a0002a0003 | a0001c0002a0001c0010a0002c0003others(1): Show | a0001c0002t0002a0001c0002t0010a0001c0002t0012others(7): Show | a0001c0002t0002g0001 a0001c0002t0002g0002 a0001c0002t0002g0004 others(70): Show |
113 | 378 | 0.2989 | -1 | c.*41 others(6): Show |
SPART | ENSG00000133104.14 | transcript | ENST00000438666.7 | protein_coding | 1407 | chr13 | TogoVar | |||||||
SPART_chr13_36296638_36351394 | 36302017 | AC | A | 3_prime_UTR_variant | MODIFIER | HG02109.hp1 HG02257.hp2 HG02258.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0008a0001c0001t0023 | a0001c0001t0005g0039 a0001c0001t0005g0145 a0001c0001t0005g0146 others(5): Show |
9 | 378 | 0.0238 | -1 | c.*23 others(6): Show |
SPART | ENSG00000133104.14 | transcript | ENST00000438666.7 | protein_coding | 9/9 | 2347 | chr13 | TogoVar | ||||||
SPART_chr13_36296638_36351394 | 36305791 | TC | T | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00323.hp2 others(110): Show |
a0001a0002 | a0001c0002a0001c0010a0002c0003 | a0001c0002t0002a0001c0002t0010a0001c0002t0012others(7): Show | a0001c0002t0002g0001 a0001c0002t0002g0002 a0001c0002t0002g0004 others(70): Show |
113 | 378 | 0.2989 | -1 | c.173 others(10): Show |
SPART | ENSG00000133104.14 | transcript | ENST00000438666.7 | protein_coding | 8/8 | chr13 | TogoVar | |||||||
SPART_chr13_36296638_36351394 | 36306749 | GA | G | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00323.hp2 others(110): Show |
a0001a0002 | a0001c0002a0001c0010a0002c0003 | a0001c0002t0002a0001c0002t0010a0001c0002t0012others(7): Show | a0001c0002t0002g0001 a0001c0002t0002g0002 a0001c0002t0002g0004 others(70): Show |
113 | 378 | 0.2989 | -1 | c.173 others(10): Show |
SPART | ENSG00000133104.14 | transcript | ENST00000438666.7 | protein_coding | 8/8 | chr13 | TogoVar | |||||||
SPART_chr13_36296638_36351394 | 36308637 | GT | G | intron_variant | MODIFIER | HG00280.hp1 HG00323.hp1 HG00423.hp2 others(174): Show |
a0001a0004a0006others(1): Show | a0001c0001a0001c0002a0001c0004others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(15): Show | a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0008 others(118): Show |
177 | 378 | 0.4683 | -1 | c.173 others(10): Show |
SPART | ENSG00000133104.14 | transcript | ENST00000438666.7 | protein_coding | 8/8 | chr13 | TogoVar | |||||||
SPART_chr13_36296638_36351394 | 36309552 | GC | G | intron_variant | MODIFIER | HG01884.hp1 HG01891.hp2 HG02109.hp2 |
a0001 | a0001c0001 | a0001c0001t0006 | a0001c0001t0006g0111 a0001c0001t0006g0135 a0001c0001t0006g0140 |
3 | 378 | 0.0079 | -1 | c.173 others(10): Show |
SPART | ENSG00000133104.14 | transcript | ENST00000438666.7 | protein_coding | 8/8 | chr13 | TogoVar | |||||||
SPART_chr13_36296638_36351394 | 36309556 | TA | T | intron_variant | MODIFIER | HG02109.hp1 HG02257.hp2 HG02258.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0008a0001c0001t0023 | a0001c0001t0005g0039 a0001c0001t0005g0145 a0001c0001t0005g0146 others(5): Show |
9 | 378 | 0.0238 | -1 | c.173 others(10): Show |
SPART | ENSG00000133104.14 | transcript | ENST00000438666.7 | protein_coding | 8/8 | chr13 | TogoVar | |||||||
SPART_chr13_36296638_36351394 | 36310852 | CT | C | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00323.hp2 others(110): Show |
a0001a0002 | a0001c0002a0001c0010a0002c0003 | a0001c0002t0002a0001c0002t0010a0001c0002t0012others(7): Show | a0001c0002t0002g0001 a0001c0002t0002g0002 a0001c0002t0002g0004 others(70): Show |
113 | 378 | 0.2989 | -1 | c.173 others(10): Show |
SPART | ENSG00000133104.14 | transcript | ENST00000438666.7 | protein_coding | 8/8 | chr13 | TogoVar | |||||||
SPART_chr13_36296638_36351394 | 36330354 | CT | C | intron_variant | MODIFIER | HG02055.hp1 HG02922.hp2 HG03209.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0023 a0001c0001t0001g0222 a0001c0001t0001g0234 |
5 | 378 | 0.0132 | -1 | c.100 others(9): Show |
SPART | ENSG00000133104.14 | transcript | ENST00000438666.7 | protein_coding | 3/8 | chr13 | TogoVar | |||||||
SPART_chr13_36296638_36351394 | 36334440 | AT | A | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00323.hp2 others(108): Show |
a0001a0002 | a0001c0002a0001c0010a0002c0003 | a0001c0002t0002a0001c0002t0010a0001c0002t0012others(5): Show | a0001c0002t0002g0001 a0001c0002t0002g0002 a0001c0002t0002g0004 others(68): Show |
111 | 378 | 0.2937 | -1 | c.810 others(8): Show |
SPART | ENSG00000133104.14 | transcript | ENST00000438666.7 | protein_coding | 2/8 | chr13 | TogoVar | |||||||
SPART_chr13_36296638_36351394 | 36339627 | CA | C | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00323.hp1 others(117): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0010others(2): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0007others(9): Show | a0001c0001t0001g0008 a0001c0001t0001g0016 a0001c0001t0001g0022 others(68): Show |
120 | 378 | 0.3175 | -1 | c.-2- others(8): Show |
SPART | ENSG00000133104.14 | transcript | ENST00000438666.7 | protein_coding | 1/8 | chr13 | TogoVar | |||||||
SPAST_chr2_32058556_32162637 | 32059036 | CA | C | upstream_gene_variant | MODIFIER | HG01070.hp1 HG02280.hp1 HG02922.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004 | a0001c0001t0001g0102 a0001c0001t0002g0278 a0001c0001t0002g0285 others(4): Show |
7 | 342 | 0.0205 | -1 | c.-47 others(6): Show |
SPAST | ENSG00000021574.14 | transcript | ENST00000315285.9 | protein_coding | 4519 | chr2 | TogoVar | |||||||
SPAST_chr2_32058556_32162637 | 32060372 | GA | G | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00408.hp1 others(112): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(7): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0074 others(112): Show |
115 | 342 | 0.3363 | -1 | c.-34 others(6): Show |
SPAST | ENSG00000021574.14 | transcript | ENST00000315285.9 | protein_coding | 3183 | chr2 | TogoVar | |||||||
SPAST_chr2_32058556_32162637 | 32065973 | CT | C | intron_variant | MODIFIER | HG00741.hp1 HG01975.hp1 HG02055.hp1 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(1): Show | a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 others(9): Show |
12 | 342 | 0.0351 | -1 | c.415 others(9): Show |
SPAST | ENSG00000021574.14 | transcript | ENST00000315285.9 | protein_coding | 1/16 | INFO_REALIGN_3_PRIME | chr2 | TogoVar |