view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SPCS3_chr4_176314966_176337245 | 176336296 | AT | A | downstream_gene_variant | MODIFIER | HG00438.hp1 HG00438.hp2 HG00558.hp1 others(74): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0003a0001c0001t0013a0001c0001t0018others(5): Show | a0001c0001t0003g0003 a0001c0001t0003g0029 a0001c0001t0003g0031 others(18): Show |
77 | 470 | 0.1638 | -1 | c.*79 others(6): Show |
SPCS3 | ENSG00000129128.13 | transcript | ENST00000503362.2 | protein_coding | 4052 | chr4 | TogoVar | |||||||
SPDEF_chr6_34532802_34561329 | 34539193 | GC | G | intron_variant | MODIFIER | HG02258.hp2 HG02451.hp2 HG02818.hp2 others(2): Show |
a0002 | a0002c0004 | a0002c0004t0002 | a0002c0004t0002g0026 a0002c0004t0002g0083 a0002c0004t0002g0084 others(1): Show |
5 | 382 | 0.0131 | -1 | c.829 others(7): Show |
SPDEF | ENSG00000124664.11 | transcript | ENST00000374037.8 | protein_coding | 5/5 | chr6 | TogoVar | |||||||
SPDEF_chr6_34532802_34561329 | 34540410 | CA | C | intron_variant | MODIFIER | HG01256.hp2 HG02258.hp1 HG06807.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0109 a0001c0001t0001g0122 a0001c0001t0001g0164 others(2): Show |
6 | 382 | 0.0157 | -1 | c.634 others(8): Show |
SPDEF | ENSG00000124664.11 | transcript | ENST00000374037.8 | protein_coding | 3/5 | chr6 | TogoVar | |||||||
SPDEF_chr6_34532802_34561329 | 34541866 | TC | T | intron_variant | MODIFIER | HG01069.hp1 HG01123.hp2 HG01175.hp1 others(16): Show |
a0002 | a0002c0002a0002c0004 | a0002c0002t0001a0002c0002t0002a0002c0002t0005others(2): Show | a0002c0002t0001g0018 a0002c0002t0001g0035 a0002c0002t0001g0044 others(11): Show |
19 | 382 | 0.0497 | -1 | c.437 others(8): Show |
SPDEF | ENSG00000124664.11 | transcript | ENST00000374037.8 | protein_coding | 2/5 | chr6 | TogoVar | |||||||
SPDEF_chr6_34532802_34561329 | 34542886 | CA | C | intron_variant | MODIFIER | HG00639.hp1 HG01070.hp2 HG01081.hp1 others(4): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0108 a0001c0001t0001g0136 a0001c0001t0001g0169 others(4): Show |
7 | 382 | 0.0183 | -1 | c.436 others(9): Show |
SPDEF | ENSG00000124664.11 | transcript | ENST00000374037.8 | protein_coding | 2/5 | chr6 | TogoVar | |||||||
SPDEF_chr6_34532802_34561329 | 34543195 | CA | C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(236): Show |
a0001a0003a0005others(2): Show | a0001c0001a0001c0003a0003c0005others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(13): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0007 others(114): Show |
239 | 382 | 0.6257 | -1 | c.436 others(8): Show |
SPDEF | ENSG00000124664.11 | transcript | ENST00000374037.8 | protein_coding | 2/5 | chr6 | TogoVar | |||||||
SPDEF_chr6_34532802_34561329 | 34543230 | GA | G | intron_variant | MODIFIER | HG01515.hp2 NA18941.hp1 NA18954.hp1 others(13): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0004 | a0001c0001t0001g0137 a0001c0001t0001g0168 a0001c0001t0002g0073 others(3): Show |
16 | 382 | 0.0419 | -1 | c.436 others(8): Show |
SPDEF | ENSG00000124664.11 | transcript | ENST00000374037.8 | protein_coding | 2/5 | chr6 | TogoVar | |||||||
SPDL1_chr5_169578773_169609778 | 169588994 | TC | T | intron_variant | MODIFIER | HG01168.hp1 HG01169.hp2 HG01192.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0139 a0001c0001t0003g0140 a0001c0001t0003g0141 others(3): Show |
6 | 398 | 0.0151 | -1 | c.159 others(8): Show |
SPDL1 | ENSG00000040275.17 | transcript | ENST00000265295.9 | protein_coding | 2/11 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SPDL1_chr5_169578773_169609778 | 169589559 | CT | C | intron_variant | MODIFIER | HG00544.hp1 HG01106.hp1 HG01168.hp2 others(53): Show |
a0001a0007a0010 | a0001c0001a0007c0008a0010c0016 | a0001c0001t0001a0007c0008t0001a0010c0016t0001 | a0001c0001t0001g0005 a0001c0001t0001g0012 a0001c0001t0001g0015 others(23): Show |
56 | 398 | 0.1407 | -1 | c.159 others(8): Show |
SPDL1 | ENSG00000040275.17 | transcript | ENST00000265295.9 | protein_coding | 2/11 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SPDL1_chr5_169578773_169609778 | 169592805 | CT | C | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp2 HG00323.hp1 others(231): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0003a0001c0005others(6): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(11): Show | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0005 others(93): Show |
234 | 398 | 0.5879 | -1 | c.337 others(8): Show |
SPDL1 | ENSG00000040275.17 | transcript | ENST00000265295.9 | protein_coding | 3/11 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SPDL1_chr5_169578773_169609778 | 169595156 | AT | A | intron_variant | MODIFIER | HG00621.hp1 NA18959.hp2 NA19082.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 others(1): Show |
4 | 398 | 0.0101 | -1 | c.891 others(8): Show |
SPDL1 | ENSG00000040275.17 | transcript | ENST00000265295.9 | protein_coding | 7/11 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SPDL1_chr5_169578773_169609778 | 169597857 | GT | G | intron_variant | MODIFIER | HG01243.hp2 HG02622.hp1 HG06807.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0072 a0001c0001t0001g0074 a0001c0001t0001g0075 |
3 | 398 | 0.0075 | -1 | c.103 others(9): Show |
SPDL1 | ENSG00000040275.17 | transcript | ENST00000265295.9 | protein_coding | 8/11 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SPDL1_chr5_169578773_169609778 | 169606892 | TA | T | downstream_gene_variant | MODIFIER | HG00140.hp2 HG00280.hp2 HG00323.hp1 others(239): Show |
a0001a0003a0007others(2): Show | a0001c0001a0001c0003a0001c0005others(5): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(10): Show | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0005 others(97): Show |
242 | 398 | 0.6080 | -1 | c.*26 others(6): Show |
SPDL1 | ENSG00000040275.17 | transcript | ENST00000265295.9 | protein_coding | 2115 | chr5 | TogoVar | |||||||
SPDYA_chr2_28805834_28855610 | 28807520 | CA | C | upstream_gene_variant | MODIFIER | HG00738.hp1 HG01069.hp1 HG01243.hp1 others(23): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0003t0004 | a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 others(23): Show |
26 | 338 | 0.0769 | -1 | c.-35 others(6): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 3313 | chr2 | TogoVar | |||||||
SPDYA_chr2_28805834_28855610 | 28809940 | CA | C | upstream_gene_variant | MODIFIER | HG01081.hp2 HG02622.hp2 HG02723.hp2 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0088 a0001c0001t0001g0099 a0001c0001t0001g0141 others(10): Show |
13 | 338 | 0.0385 | -1 | c.-10 others(6): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 893 | chr2 | TogoVar | |||||||
SPDYA_chr2_28805834_28855610 | 28815281 | GA | G | intron_variant | MODIFIER | HG01192.hp1 HG01934.hp2 HG02698.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0044 a0001c0001t0001g0174 a0001c0001t0001g0175 others(3): Show |
6 | 338 | 0.0178 | -1 | c.-19 others(8): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPDYA_chr2_28805834_28855610 | 28816862 | AT | A | intron_variant | MODIFIER | HG01243.hp1 HG02145.hp2 HG02280.hp1 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 others(12): Show |
15 | 338 | 0.0444 | -1 | c.235 others(8): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPDYA_chr2_28805834_28855610 | 28817851 | CA | C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(211): Show |
a0001a0003 | a0001c0001a0001c0006a0003c0005 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(208): Show |
214 | 338 | 0.6331 | -1 | c.236 others(9): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPDYA_chr2_28805834_28855610 | 28818440 | TA | T | intron_variant | MODIFIER | HG00323.hp2 HG01257.hp1 HG01884.hp1 others(19): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0002 | a0001c0001t0001g0004 a0001c0001t0001g0038 a0001c0001t0001g0082 others(19): Show |
22 | 338 | 0.0651 | -1 | c.236 others(8): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPDYA_chr2_28805834_28855610 | 28821178 | AT | A | intron_variant | MODIFIER | HG00673.hp2 HG00741.hp1 HG01192.hp1 others(46): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 others(46): Show |
49 | 338 | 0.1450 | -1 | c.295 others(9): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 4/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPDYA_chr2_28805834_28855610 | 28821197 | CT | C | intron_variant | MODIFIER | HG01934.hp1 HG02055.hp2 HG02145.hp1 others(10): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0002 | a0001c0001t0001a0001c0001t0002a0001c0003t0001others(1): Show | a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 others(10): Show |
13 | 338 | 0.0385 | -1 | c.295 others(9): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 4/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPDYA_chr2_28805834_28855610 | 28822419 | AC | A | intron_variant | MODIFIER | HG02965.hp1 HG03130.hp1 NA20300.hp2 |
a0001 | a0001c0003 | a0001c0003t0004 | a0001c0003t0004g0331 a0001c0003t0004g0332 a0001c0003t0004g0333 |
3 | 338 | 0.0089 | -1 | c.380 others(7): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 5/7 | chr2 | TogoVar | |||||||
SPDYA_chr2_28805834_28855610 | 28824491 | AC | A | intron_variant | MODIFIER | HG01891.hp1 HG01934.hp1 HG02965.hp1 others(4): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0003t0001a0001c0003t0004 | a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0003t0001g0019 others(4): Show |
7 | 338 | 0.0207 | -1 | c.380 others(9): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 5/7 | chr2 | TogoVar | |||||||
SPDYA_chr2_28805834_28855610 | 28824492 | CA | C | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(218): Show |
a0001a0003 | a0001c0001a0001c0004a0001c0006others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(3): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(216): Show |
221 | 338 | 0.6539 | -1 | c.380 others(9): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPDYA_chr2_28805834_28855610 | 28826611 | CT | C | intron_variant | MODIFIER | HG00438.hp2 HG01074.hp1 HG01074.hp2 others(55): Show |
a0001a0003 | a0001c0001a0001c0006a0003c0005 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 others(55): Show |
58 | 338 | 0.1716 | -1 | c.381 others(9): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPDYA_chr2_28805834_28855610 | 28826949 | CT | C | intron_variant | MODIFIER | HG01261.hp1 HG01516.hp1 HG01981.hp2 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0033 a0001c0001t0001g0057 a0001c0001t0001g0093 others(9): Show |
12 | 338 | 0.0355 | -1 | c.381 others(9): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPDYA_chr2_28805834_28855610 | 28829959 | AG | A | intron_variant | MODIFIER | HG01934.hp1 HG02965.hp1 HG03130.hp1 others(3): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0003t0001a0001c0003t0004 | a0001c0001t0001g0208 a0001c0001t0001g0322 a0001c0003t0001g0335 others(3): Show |
6 | 338 | 0.0178 | -1 | c.552 others(8): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 6/7 | chr2 | TogoVar | |||||||
SPDYA_chr2_28805834_28855610 | 28830200 | CT | C | intron_variant | MODIFIER | HG00639.hp2 HG01074.hp2 HG01106.hp2 others(17): Show |
a0001 | a0001c0001a0001c0003a0001c0006 | a0001c0001t0001a0001c0001t0003a0001c0003t0001others(2): Show | a0001c0001t0001g0084 a0001c0001t0001g0122 a0001c0001t0001g0140 others(17): Show |
20 | 338 | 0.0592 | -1 | c.552 others(8): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 6/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPDYA_chr2_28805834_28855610 | 28832843 | CT | C | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(181): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0003t0001others(1): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0005 others(179): Show |
184 | 338 | 0.5444 | -1 | c.552 others(9): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 6/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPDYA_chr2_28805834_28855610 | 28835226 | CT | C | intron_variant | MODIFIER | HG00099.hp1 HG01069.hp2 HG01074.hp2 others(9): Show |
a0001 | a0001c0001a0001c0006 | a0001c0001t0001a0001c0006t0003 | a0001c0001t0001g0040 a0001c0001t0001g0052 a0001c0001t0001g0074 others(9): Show |
12 | 338 | 0.0355 | -1 | c.553 others(9): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 6/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPDYA_chr2_28805834_28855610 | 28837742 | CT | C | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00323.hp1 others(98): Show |
a0001a0002 | a0001c0001a0001c0003a0001c0006others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0003t0001others(3): Show | a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 others(98): Show |
101 | 338 | 0.2988 | -1 | c.553 others(9): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 6/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPDYA_chr2_28805834_28855610 | 28838178 | AT | A | intron_variant | MODIFIER | HG01243.hp1 HG01346.hp2 HG01884.hp1 others(22): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0002 | a0001c0001t0001a0001c0001t0002a0001c0003t0001others(1): Show | a0001c0001t0001g0005 a0001c0001t0001g0009 a0001c0001t0001g0010 others(22): Show |
25 | 338 | 0.0740 | -1 | c.553 others(9): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 6/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPDYA_chr2_28805834_28855610 | 28840930 | GT | G | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00280.hp2 others(74): Show |
a0001 | a0001c0001a0001c0006 | a0001c0001t0001a0001c0001t0003a0001c0006t0003 | a0001c0001t0001g0003 a0001c0001t0001g0029 a0001c0001t0001g0187 others(73): Show |
77 | 338 | 0.2278 | -1 | c.850 others(8): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 7/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPDYA_chr2_28805834_28855610 | 28843550 | CA | C | intron_variant | MODIFIER | HG01256.hp1 HG01891.hp1 HG01934.hp1 others(14): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0003t0001 | a0001c0001t0001g0049 a0001c0001t0001g0056 a0001c0001t0001g0092 others(14): Show |
17 | 338 | 0.0503 | -1 | c.850 others(9): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 7/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPDYA_chr2_28805834_28855610 | 28845249 | CT | C | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(186): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0002 | a0001c0001t0001a0001c0001t0002a0001c0003t0001others(2): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(184): Show |
189 | 338 | 0.5592 | -1 | c.851 others(9): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 7/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPDYA_chr2_28805834_28855610 | 28851913 | TA | T | downstream_gene_variant | MODIFIER | HG01256.hp1 HG01257.hp1 HG02055.hp2 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0040 a0001c0001t0001g0051 a0001c0001t0001g0052 others(5): Show |
8 | 338 | 0.0237 | -1 | c.*19 others(6): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 1304 | chr2 | TogoVar | |||||||
SPDYA_chr2_28805834_28855610 | 28852312 | CA | C | downstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(220): Show |
a0001 | a0001c0001a0001c0003a0001c0006 | a0001c0001t0001a0001c0001t0003a0001c0003t0001others(2): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(217): Show |
223 | 338 | 0.6598 | -1 | c.*23 others(6): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 1703 | chr2 | TogoVar | |||||||
SPDYA_chr2_28805834_28855610 | 28854738 | CA | C | downstream_gene_variant | MODIFIER | HG00323.hp2 HG00609.hp1 HG00621.hp1 others(86): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0002 a0001c0001t0001g0005 a0001c0001t0001g0009 others(85): Show |
89 | 338 | 0.2633 | -1 | c.*47 others(6): Show |
SPDYA | ENSG00000163806.16 | transcript | ENST00000334056.10 | protein_coding | 4129 | chr2 | TogoVar | |||||||
SPDYC_chr11_65165233_65178374 | 65165753 | CT | C | upstream_gene_variant | MODIFIER | HG00558.hp2 HG00609.hp2 HG00735.hp1 others(35): Show |
a0001a0003 | a0001c0001a0003c0002 | a0001c0001t0001a0003c0002t0001 | a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0006 others(6): Show |
38 | 442 | 0.0860 | -1 | c.-45 others(6): Show |
SPDYC | ENSG00000204710.3 | transcript | ENST00000377185.3 | protein_coding | 4479 | chr11 | TogoVar | |||||||
SPDYC_chr11_65165233_65178374 | 65167303 | TG | T | upstream_gene_variant | MODIFIER | HG02622.hp2 HG03098.hp1 NA19030.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0006 a0001c0001t0001g0018 a0001c0001t0001g0026 |
3 | 442 | 0.0068 | -1 | c.-29 others(6): Show |
SPDYC | ENSG00000204710.3 | transcript | ENST00000377185.3 | protein_coding | 2929 | chr11 | TogoVar | |||||||
SPDYC_chr11_65165233_65178374 | 65173892 | CA | C | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00323.hp2 others(122): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(20): Show |
125 | 442 | 0.2828 | -1 | c.*67 others(5): Show |
SPDYC | ENSG00000204710.3 | transcript | ENST00000377185.3 | protein_coding | 519 | chr11 | TogoVar | |||||||
SPDYC_chr11_65165233_65178374 | 65174116 | CT | C | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(324): Show |
a0001a0004 | a0001c0001a0004c0004 | a0001c0001t0001a0004c0004t0001 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(30): Show |
327 | 442 | 0.7398 | -1 | c.*90 others(5): Show |
SPDYC | ENSG00000204710.3 | transcript | ENST00000377185.3 | protein_coding | 743 | chr11 | TogoVar | |||||||
SPDYC_chr11_65165233_65178374 | 65175936 | AC | A | downstream_gene_variant | MODIFIER | HG02630.hp1 HG02895.hp1 HG02897.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 3 | 442 | 0.0068 | -1 | c.*27 others(6): Show |
SPDYC | ENSG00000204710.3 | transcript | ENST00000377185.3 | protein_coding | 2563 | chr11 | TogoVar | |||||||
SPDYC_chr11_65165233_65178374 | 65177557 | GC | G | downstream_gene_variant | MODIFIER | HG01109.hp2 HG02257.hp1 HG02486.hp1 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0006 others(8): Show |
15 | 442 | 0.0339 | -1 | c.*43 others(6): Show |
SPDYC | ENSG00000204710.3 | transcript | ENST00000377185.3 | protein_coding | 4184 | chr11 | TogoVar | |||||||
SPDYC_chr11_65165233_65178374 | 65177638 | CT | C | downstream_gene_variant | MODIFIER | HG00408.hp2 HG01109.hp2 HG02071.hp1 others(11): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(5): Show |
14 | 442 | 0.0317 | -1 | c.*44 others(6): Show |
SPDYC | ENSG00000204710.3 | transcript | ENST00000377185.3 | protein_coding | 4265 | chr11 | TogoVar | |||||||
SPDYE10_chr7_73099008_73160431 | 73107618 | CA | C | intron_variant | MODIFIER | HG00280.hp1 HG00280.hp2 HG00423.hp1 others(135): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0002a0001c0005others(7): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0015others(22): Show | a0001c0001t0002g0145 a0001c0001t0002g0146 a0001c0001t0002g0147 others(135): Show |
138 | 216 | 0.6389 | -1 | c.495 others(8): Show |
SPDYE10 | ENSG00000274570.6 | transcript | ENST00000691996.1 | protein_coding | 6/8 | chr7 | TogoVar | |||||||
SPDYE10_chr7_73099008_73160431 | 73108359 | CT | C | intron_variant | MODIFIER | HG00639.hp2 HG00741.hp2 HG01169.hp1 others(43): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0005a0002c0003others(4): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0015others(15): Show | a0001c0001t0002g0145 a0001c0001t0002g0146 a0001c0001t0002g0147 others(43): Show |
46 | 216 | 0.2130 | -1 | c.494 others(8): Show |
SPDYE10 | ENSG00000274570.6 | transcript | ENST00000691996.1 | protein_coding | 6/8 | chr7 | TogoVar | |||||||
SPDYE10_chr7_73099008_73160431 | 73111754 | CT | C | intron_variant | MODIFIER | HG00280.hp2 HG01257.hp2 HG01884.hp2 others(11): Show |
a0001a0002a0004others(1): Show | a0001c0001a0001c0005a0002c0003others(3): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0019others(9): Show | a0001c0001t0002g0027 a0001c0001t0003g0031 a0001c0001t0003g0181 others(11): Show |
14 | 216 | 0.0648 | -1 | c.130 others(8): Show |
SPDYE10 | ENSG00000274570.6 | transcript | ENST00000691996.1 | protein_coding | 3/8 | chr7 | TogoVar | |||||||
SPDYE10_chr7_73099008_73160431 | 73113034 | CA | C | intron_variant | MODIFIER | HG00423.hp2 HG00741.hp2 HG01169.hp1 others(35): Show |
a0001a0002a0008 | a0001c0001a0001c0005a0002c0004others(1): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0006others(7): Show | a0001c0001t0002g0145 a0001c0001t0002g0146 a0001c0001t0002g0147 others(35): Show |
38 | 216 | 0.1759 | -1 | c.-45 others(9): Show |
SPDYE10 | ENSG00000274570.6 | transcript | ENST00000691996.1 | protein_coding | 2/8 | chr7 | TogoVar | |||||||
SPDYE10_chr7_73099008_73160431 | 73114027 | CA | C | intron_variant | MODIFIER | HG02145.hp1 HG02451.hp1 HG02572.hp1 others(6): Show |
a0001a0002 | a0001c0001a0002c0004 | a0001c0001t0004a0001c0001t0024a0002c0004t0004others(1): Show | a0001c0001t0004g0032 a0001c0001t0004g0042 a0001c0001t0024g0052 others(6): Show |
9 | 216 | 0.0417 | -1 | c.-45 others(10): Show |
SPDYE10 | ENSG00000274570.6 | transcript | ENST00000691996.1 | protein_coding | 2/8 | chr7 | TogoVar |