Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SPIN1_chr9_88383444_88483694	88469604	TC TC	T T	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00639.hp1 others(80): Show HG00099.hp2 HG00140.hp2 HG00639.hp1 HG00733.hp2 HG01070.hp2 HG01099.hp2 HG01109.hp1 HG01255.hp2 HG01496.hp2 HG01515.hp1 HG01517.hp2 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01993.hp1 HG02071.hp2 HG02080.hp2 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02280.hp1 HG02451.hp1 HG02451.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02735.hp1 HG02818.hp1 HG02886.hp2 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG03098.hp1 HG03098.hp2 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03710.hp1 HG03710.hp2 HG04115.hp2 HG04204.hp1 HG04228.hp1 HG06807.hp2 NA18612.hp1 NA18906.hp1 NA18906.hp2 NA18944.hp2 NA18950.hp1 NA18953.hp2 NA18955.hp2 NA18956.hp2 NA18969.hp2 NA18978.hp1 NA18998.hp2 NA19003.hp2 NA19009.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19079.hp2 NA19240.hp1 NA20129.hp2 NA20300.hp2 NA21309.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 others(4): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0008 a0001c0001t0011 a0001c0001t0012 a0001c0001t0016	a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0005 others(80): Show a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0005 a0001c0001t0002g0006 a0001c0001t0002g0007 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0034 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0039 a0001c0001t0002g0042 a0001c0001t0002g0046 a0001c0001t0002g0047 a0001c0001t0002g0048 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0154 a0001c0001t0002g0155 a0001c0001t0002g0156 a0001c0001t0002g0157 a0001c0001t0002g0158 a0001c0001t0002g0159 a0001c0001t0002g0160 a0001c0001t0002g0161 a0001c0001t0002g0162 a0001c0001t0002g0163 a0001c0001t0002g0164 a0001c0001t0002g0165 a0001c0001t0002g0166 a0001c0001t0002g0167 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0003g0012 a0001c0001t0003g0015 a0001c0001t0003g0016 a0001c0001t0003g0017 a0001c0001t0003g0019 a0001c0001t0003g0023 a0001c0001t0003g0024 a0001c0001t0003g0025 a0001c0001t0003g0028 a0001c0001t0003g0029 a0001c0001t0003g0030 a0001c0001t0003g0031 a0001c0001t0003g0032 a0001c0001t0003g0033 a0001c0001t0003g0035 a0001c0001t0003g0040 a0001c0001t0003g0041 a0001c0001t0003g0071 a0001c0001t0005g0011 a0001c0001t0005g0018 a0001c0001t0005g0020 a0001c0001t0005g0021 a0001c0001t0005g0026 a0001c0001t0005g0027 a0001c0001t0008g0043 a0001c0001t0008g0044 a0001c0001t0008g0045 a0001c0001t0008g0070 a0001c0001t0011g0169 a0001c0001t0011g0171 a0001c0001t0012g0049 a0001c0001t0016g0059	83	176	0.4716	-1	c.589 others(9): Show c.589+1002delC	SPIN1	ENSG00000106723.17	transcript	ENST00000375859.4	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr9	TogoVar
SPIN1_chr9_88383444_88483694	88470590	TG TG	T T	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG03098.hp2 HG03579.hp2 HG01891.hp1 HG03098.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0047 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0047 a0001c0001t0002g0063 a0001c0001t0002g0064	3	176	0.0171	-1	c.589 others(9): Show c.589+1987delG	SPIN1	ENSG00000106723.17	transcript	ENST00000375859.4	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr9	TogoVar
SPIN1_chr9_88383444_88483694	88470601	CT CT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp2 HG00639.hp1 others(106): Show HG00099.hp2 HG00140.hp2 HG00639.hp1 HG00733.hp2 HG00741.hp1 HG01070.hp2 HG01099.hp2 HG01109.hp1 HG01192.hp1 HG01243.hp1 HG01255.hp2 HG01496.hp2 HG01515.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp2 HG01993.hp1 HG02080.hp2 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03710.hp1 HG03710.hp2 HG04115.hp2 HG04204.hp1 HG04228.hp1 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18612.hp1 NA18906.hp1 NA18906.hp2 NA18944.hp2 NA18950.hp1 NA18953.hp2 NA18955.hp2 NA18956.hp2 NA18969.hp2 NA18978.hp1 NA18998.hp2 NA19009.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19079.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA21309.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0012 a0001c0001t0016 a0001c0002t0004 a0001c0002t0006 a0001c0002t0015	a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0138 others(106): Show a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0138 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0005 a0001c0001t0002g0006 a0001c0001t0002g0007 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0034 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0039 a0001c0001t0002g0042 a0001c0001t0002g0046 a0001c0001t0002g0048 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0154 a0001c0001t0002g0155 a0001c0001t0002g0156 a0001c0001t0002g0157 a0001c0001t0002g0158 a0001c0001t0002g0159 a0001c0001t0002g0160 a0001c0001t0002g0161 a0001c0001t0002g0162 a0001c0001t0002g0163 a0001c0001t0002g0164 a0001c0001t0002g0165 a0001c0001t0002g0166 a0001c0001t0002g0167 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0003g0012 a0001c0001t0003g0015 a0001c0001t0003g0016 a0001c0001t0003g0017 a0001c0001t0003g0019 a0001c0001t0003g0022 a0001c0001t0003g0023 a0001c0001t0003g0024 a0001c0001t0003g0025 a0001c0001t0003g0028 a0001c0001t0003g0029 a0001c0001t0003g0030 a0001c0001t0003g0031 a0001c0001t0003g0032 a0001c0001t0003g0033 a0001c0001t0003g0035 a0001c0001t0003g0040 a0001c0001t0003g0041 a0001c0001t0003g0071 a0001c0001t0005g0011 a0001c0001t0005g0020 a0001c0001t0005g0021 a0001c0001t0005g0026 a0001c0001t0005g0027 a0001c0001t0008g0043 a0001c0001t0008g0044 a0001c0001t0008g0045 a0001c0001t0008g0070 a0001c0001t0009g0174 a0001c0001t0009g0175 a0001c0001t0009g0176 a0001c0001t0011g0169 a0001c0001t0011g0171 a0001c0001t0012g0049 a0001c0001t0016g0059 a0001c0002t0004g0080 a0001c0002t0004g0082 a0001c0002t0004g0083 a0001c0002t0004g0084 a0001c0002t0004g0085 a0001c0002t0004g0086 a0001c0002t0004g0087 a0001c0002t0004g0136 a0001c0002t0004g0172 a0001c0002t0004g0173 a0001c0002t0006g0139 a0001c0002t0006g0140 a0001c0002t0006g0141 a0001c0002t0006g0142 a0001c0002t0006g0143 a0001c0002t0006g0144 a0001c0002t0015g0001	109	176	0.6193	-1	c.589 others(9): Show c.589+2007delT	SPIN1	ENSG00000106723.17	transcript	ENST00000375859.4	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr9	TogoVar
SPIN1_chr9_88383444_88483694	88473694	CA CA	C C	intron_variant intron_variant	MODIFIER	HG02083.hp1 NA18612.hp1 NA18950.hp1 others(2): Show HG02083.hp1 NA18612.hp1 NA18950.hp1 NA18955.hp2 NA19079.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0016 a0001c0001t0003g0017 a0001c0001t0003g0023 others(2): Show a0001c0001t0003g0016 a0001c0001t0003g0017 a0001c0001t0003g0023 a0001c0001t0003g0024 a0001c0001t0003g0028	5	176	0.0284	-1	c.590 others(9): Show c.590-1383delA	SPIN1	ENSG00000106723.17	transcript	ENST00000375859.4	protein_coding	5/5			chr9	TogoVar
SPIN1_chr9_88383444_88483694	88475047	CT CT	C C	splice_region_variant others(1): Show splice_region_variant intron_variant	LOW	HG00099.hp1 HG00140.hp2 HG00639.hp1 others(89): Show HG00099.hp1 HG00140.hp2 HG00639.hp1 HG00733.hp2 HG01070.hp1 HG01109.hp1 HG01168.hp2 HG01255.hp2 HG01517.hp2 HG01884.hp2 HG01891.hp2 HG01993.hp1 HG02071.hp2 HG02080.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02572.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02818.hp1 HG02886.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02970.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03516.hp1 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03710.hp1 HG03710.hp2 HG04204.hp1 HG04228.hp1 HG06807.hp1 HG06807.hp2 NA18612.hp1 NA18906.hp1 NA18906.hp2 NA18944.hp2 NA18950.hp1 NA18953.hp2 NA18955.hp2 NA18956.hp2 NA18969.hp2 NA18978.hp1 NA18998.hp2 NA19003.hp2 NA19009.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19079.hp2 NA19240.hp1 NA19240.hp2 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0011 a0001c0001t0012 a0001c0001t0016 a0001c0002t0004 a0001c0002t0015	a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0098 others(89): Show a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0098 a0001c0001t0001g0105 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0150 a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0005 a0001c0001t0002g0006 a0001c0001t0002g0007 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0034 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0039 a0001c0001t0002g0042 a0001c0001t0002g0046 a0001c0001t0002g0048 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0060 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0154 a0001c0001t0002g0155 a0001c0001t0002g0156 a0001c0001t0002g0157 a0001c0001t0002g0158 a0001c0001t0002g0159 a0001c0001t0002g0160 a0001c0001t0002g0161 a0001c0001t0002g0162 a0001c0001t0002g0163 a0001c0001t0002g0164 a0001c0001t0002g0165 a0001c0001t0002g0166 a0001c0001t0002g0167 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0003g0016 a0001c0001t0003g0017 a0001c0001t0003g0022 a0001c0001t0003g0023 a0001c0001t0003g0025 a0001c0001t0003g0028 a0001c0001t0003g0031 a0001c0001t0003g0032 a0001c0001t0003g0033 a0001c0001t0003g0035 a0001c0001t0003g0040 a0001c0001t0003g0041 a0001c0001t0003g0071 a0001c0001t0005g0018 a0001c0001t0005g0020 a0001c0001t0005g0021 a0001c0001t0005g0026 a0001c0001t0005g0027 a0001c0001t0007g0100 a0001c0001t0008g0043 a0001c0001t0008g0044 a0001c0001t0008g0045 a0001c0001t0008g0070 a0001c0001t0011g0169 a0001c0001t0011g0171 a0001c0001t0012g0049 a0001c0001t0016g0059 a0001c0002t0004g0082 a0001c0002t0004g0083 a0001c0002t0004g0084 a0001c0002t0004g0085 a0001c0002t0004g0086 a0001c0002t0004g0087 a0001c0002t0004g0136 a0001c0002t0004g0172 a0001c0002t0015g0001	92	176	0.5227	-1	c.590 others(6): Show c.590-8delT	SPIN1	ENSG00000106723.17	transcript	ENST00000375859.4	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr9	TogoVar
SPIN1_chr9_88383444_88483694	88476083	TG TG	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00099.hp2 HG00733.hp2 HG01070.hp2 others(75): Show HG00099.hp2 HG00733.hp2 HG01070.hp2 HG01099.hp2 HG01109.hp1 HG01255.hp2 HG01496.hp2 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG02071.hp2 HG02080.hp2 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02280.hp1 HG02451.hp1 HG02451.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02735.hp1 HG02818.hp1 HG02886.hp2 HG02896.hp2 HG02897.hp1 HG02922.hp1 HG03098.hp1 HG03098.hp2 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03579.hp2 HG03710.hp1 HG03710.hp2 HG04115.hp2 HG04204.hp1 HG04228.hp1 HG06807.hp2 NA18612.hp1 NA18906.hp1 NA18906.hp2 NA18944.hp2 NA18950.hp1 NA18953.hp2 NA18955.hp2 NA18956.hp2 NA18969.hp2 NA18978.hp1 NA18998.hp2 NA19009.hp1 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19079.hp2 NA19240.hp1 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA21309.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 others(3): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0001c0001t0011 a0001c0001t0012 a0001c0001t0016	a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0005 others(75): Show a0001c0001t0002g0003 a0001c0001t0002g0004 a0001c0001t0002g0005 a0001c0001t0002g0006 a0001c0001t0002g0007 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0034 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0039 a0001c0001t0002g0042 a0001c0001t0002g0046 a0001c0001t0002g0047 a0001c0001t0002g0048 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0154 a0001c0001t0002g0155 a0001c0001t0002g0156 a0001c0001t0002g0157 a0001c0001t0002g0158 a0001c0001t0002g0159 a0001c0001t0002g0160 a0001c0001t0002g0161 a0001c0001t0002g0162 a0001c0001t0002g0163 a0001c0001t0002g0164 a0001c0001t0002g0165 a0001c0001t0002g0166 a0001c0001t0002g0167 a0001c0001t0002g0168 a0001c0001t0002g0170 a0001c0001t0003g0012 a0001c0001t0003g0015 a0001c0001t0003g0016 a0001c0001t0003g0017 a0001c0001t0003g0019 a0001c0001t0003g0022 a0001c0001t0003g0023 a0001c0001t0003g0024 a0001c0001t0003g0025 a0001c0001t0003g0028 a0001c0001t0003g0029 a0001c0001t0003g0030 a0001c0001t0003g0031 a0001c0001t0003g0032 a0001c0001t0003g0033 a0001c0001t0003g0035 a0001c0001t0003g0040 a0001c0001t0003g0041 a0001c0001t0003g0071 a0001c0001t0008g0043 a0001c0001t0008g0044 a0001c0001t0008g0045 a0001c0001t0008g0070 a0001c0001t0011g0169 a0001c0001t0011g0171 a0001c0001t0012g0049 a0001c0001t0016g0059	78	176	0.4432	-1	c.81 others(5): Show c.815delG	SPIN1	ENSG00000106723.17	transcript	ENST00000375859.4	protein_coding	6/6	815	INFO_REALIGN_3_PRIME	chr9	TogoVar
SPIN1_chr9_88383444_88483694	88481594	CA CA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00639.hp2 others(42): Show HG00099.hp1 HG00140.hp1 HG00639.hp2 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG01070.hp1 HG01168.hp2 HG01243.hp2 HG01255.hp1 HG01496.hp1 HG01515.hp2 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01981.hp1 HG01981.hp2 HG02055.hp1 HG02055.hp2 HG02071.hp1 HG02080.hp1 HG02083.hp2 HG02129.hp2 HG02523.hp2 HG02622.hp2 HG02647.hp2 HG02735.hp2 HG02738.hp2 HG03139.hp1 HG03239.hp1 HG03516.hp2 HG03834.hp1 HG03834.hp2 HG04115.hp1 HG04204.hp2 NA18612.hp2 NA18944.hp1 NA18950.hp2 NA18953.hp1 NA18955.hp1 NA18969.hp1 NA18978.hp2 NA19003.hp1 NA19079.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0007 a0001c0001t0010 others(2): Show a0001c0001t0001 a0001c0001t0007 a0001c0001t0010 a0001c0001t0014 a0001c0001t0017	a0001c0001t0001g0010 a0001c0001t0001g0075 a0001c0001t0001g0076 others(42): Show a0001c0001t0001g0010 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0127 a0001c0001t0001g0129 a0001c0001t0001g0131 a0001c0001t0001g0134 a0001c0001t0001g0145 a0001c0001t0001g0147 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0007g0078 a0001c0001t0007g0100 a0001c0001t0007g0121 a0001c0001t0007g0135 a0001c0001t0010g0009 a0001c0001t0014g0081 a0001c0001t0017g0095	45	176	0.2557	-1	c.63 others(6): Show c.6318delA	SPIN1	ENSG00000106723.17	transcript	ENST00000375859.4	protein_coding		2901		chr9	TogoVar
SPIN2A_chrX_57130650_57142397	57130841	CA CA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18969.hp2 NA18969.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0004	1	328	0.0031	-1	c.49 others(6): Show c.4979delT	SPIN2A	ENSG00000147059.9	transcript	ENST00000374906.4	protein_coding		4808		chrX	TogoVar
SPIN2A_chrX_57130650_57142397	57131079	CT CT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01496.hp2 HG02015.hp1 HG01496.hp2 HG02015.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0027 a0001c0001t0001g0001 a0001c0001t0001g0027	2	328	0.0061	-1	c.47 others(6): Show c.4741delA	SPIN2A	ENSG00000147059.9	transcript	ENST00000374906.4	protein_coding		4570		chrX	TogoVar
SPIN2A_chrX_57130650_57142397	57137163	TC TC	T T	intron_variant intron_variant	MODIFIER	NA18987.hp2 NA18987.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0017 a0001c0001t0001g0017	1	328	0.0031	-1	c.-6+ others(6): Show c.-6+96delG	SPIN2A	ENSG00000147059.9	transcript	ENST00000374906.4	protein_coding	1/1			chrX	TogoVar
SPIN2A_chrX_57130650_57142397	57137722	TC TC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19055.hp1 NA19055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	328	0.0031	-1	c.-46 others(5): Show c.-469delG	SPIN2A	ENSG00000147059.9	transcript	ENST00000374906.4	protein_coding		326		chrX	TogoVar
SPIN2A_chrX_57130650_57142397	57138193	AT AT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19089.hp1 NA19089.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0004	1	328	0.0031	-1	c.-94 others(5): Show c.-940delA	SPIN2A	ENSG00000147059.9	transcript	ENST00000374906.4	protein_coding		797		chrX	TogoVar
SPIN2A_chrX_57130650_57142397	57139431	GT GT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19076.hp1 NA19076.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0002	1	328	0.0031	-1	c.-21 others(6): Show c.-2178delA	SPIN2A	ENSG00000147059.9	transcript	ENST00000374906.4	protein_coding		2035		chrX	TogoVar
SPIN2A_chrX_57130650_57142397	57140143	CT CT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18978.hp1 NA18978.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	328	0.0031	-1	c.-28 others(6): Show c.-2890delA	SPIN2A	ENSG00000147059.9	transcript	ENST00000374906.4	protein_coding		2747		chrX	TogoVar
SPIN2A_chrX_57130650_57142397	57140233	TG TG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19089.hp1 NA19089.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0004 a0001c0001t0001g0004	1	328	0.0031	-1	c.-29 others(6): Show c.-2980delC	SPIN2A	ENSG00000147059.9	transcript	ENST00000374906.4	protein_coding		2837		chrX	TogoVar
SPIN2A_chrX_57130650_57142397	57140417	CA CA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02257.hp1 HG02886.hp2 NA18940.hp1 others(4): Show HG02257.hp1 HG02886.hp2 NA18940.hp1 NA18965.hp1 NA18967.hp1 NA18987.hp2 NA19074.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(2): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0017 a0001c0001t0001g0018	7	328	0.0213	-1	c.-31 others(6): Show c.-3164delT	SPIN2A	ENSG00000147059.9	transcript	ENST00000374906.4	protein_coding		3021		chrX	TogoVar
SPIN2A_chrX_57130650_57142397	57140598	CA CA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01123.hp1 HG01361.hp1 HG02004.hp2 others(12): Show HG01123.hp1 HG01361.hp1 HG02004.hp2 HG02109.hp2 HG02257.hp1 HG02258.hp1 HG02809.hp2 HG02886.hp2 HG03130.hp1 HG06807.hp1 NA18951.hp2 NA18962.hp1 NA18988.hp1 NA19074.hp2 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(4): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 a0001c0001t0001g0008 a0001c0001t0001g0019 a0001c0001t0001g0029 a0001c0002t0001g0007	15	328	0.0457	-1	c.-33 others(6): Show c.-3345delT	SPIN2A	ENSG00000147059.9	transcript	ENST00000374906.4	protein_coding		3202		chrX	TogoVar
SPIN2B_chrX_57114682_57126548	57114802	TG TG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18963.hp2 NA18963.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	322	0.0031	-1	c.50 others(6): Show c.5050delC	SPIN2B	ENSG00000186787.10	transcript	ENST00000434397.3	protein_coding		4879		chrX	TogoVar
SPIN2B_chrX_57114682_57126548	57115824	TC TC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18963.hp2 NA18963.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	322	0.0031	-1	c.40 others(6): Show c.4028delG	SPIN2B	ENSG00000186787.10	transcript	ENST00000434397.3	protein_coding		3857		chrX	TogoVar
SPIN2B_chrX_57114682_57126548	57115833	AT AT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18963.hp2 NA18963.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	322	0.0031	-1	c.40 others(6): Show c.4019delA	SPIN2B	ENSG00000186787.10	transcript	ENST00000434397.3	protein_coding		3848		chrX	TogoVar
SPIN2B_chrX_57114682_57126548	57116299	TC TC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18963.hp2 NA18963.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	322	0.0031	-1	c.35 others(6): Show c.3553delG	SPIN2B	ENSG00000186787.10	transcript	ENST00000434397.3	protein_coding		3382		chrX	TogoVar
SPIN2B_chrX_57114682_57126548	57116752	CA CA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18963.hp2 NA18963.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	322	0.0031	-1	c.31 others(6): Show c.3100delT	SPIN2B	ENSG00000186787.10	transcript	ENST00000434397.3	protein_coding		2929		chrX	TogoVar
SPIN2B_chrX_57114682_57126548	57121791	TC TC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19009.hp1 NA19009.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	322	0.0031	-1	c.-55 others(5): Show c.-557delG	SPIN2B	ENSG00000186787.10	transcript	ENST00000434397.3	protein_coding		244		chrX	TogoVar
SPIN2B_chrX_57114682_57126548	57124240	GC GC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18963.hp1 NA18963.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0002 a0001c0001t0002g0002	1	322	0.0031	-1	c.-30 others(6): Show c.-3006delG	SPIN2B	ENSG00000186787.10	transcript	ENST00000434397.3	protein_coding		2693		chrX	TogoVar
SPIN2B_chrX_57114682_57126548	57125012	AT AT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01361.hp2 HG01361.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0002 a0001c0001t0002g0002	1	322	0.0031	-1	c.-37 others(6): Show c.-3778delA	SPIN2B	ENSG00000186787.10	transcript	ENST00000434397.3	protein_coding		3465		chrX	TogoVar
SPIN3_chrX_56985831_57000541	56985964	AC AC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19059.hp1 NA19059.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	318	0.0031	-1	c.82 others(6): Show c.8206delG	SPIN3	ENSG00000204271.13	transcript	ENST00000374919.6	protein_coding		4866		chrX	TogoVar
SPIN3_chrX_56985831_57000541	56986085	AT AT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19059.hp1 NA19059.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	318	0.0031	-1	c.80 others(6): Show c.8085delA	SPIN3	ENSG00000204271.13	transcript	ENST00000374919.6	protein_coding		4745		chrX	TogoVar
SPIN3_chrX_56985831_57000541	56986393	GA GA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19059.hp1 NA19059.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	318	0.0031	-1	c.77 others(6): Show c.7777delT	SPIN3	ENSG00000204271.13	transcript	ENST00000374919.6	protein_coding		4437		chrX	TogoVar
SPIN3_chrX_56985831_57000541	56987323	CT CT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00733.hp1 HG02027.hp1 HG02886.hp2 others(7): Show HG00733.hp1 HG02027.hp1 HG02886.hp2 HG02922.hp2 HG03098.hp1 HG03209.hp1 HG03225.hp1 HG03579.hp1 NA18974.hp1 NA20300.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0002 a0001c0001t0003 a0002c0003t0009 a0001c0001t0002 a0001c0001t0003 a0002c0003t0009	a0001c0001t0002g0002 a0001c0001t0003g0003 a0002c0003t0009g0010 a0001c0001t0002g0002 a0001c0001t0003g0003 a0002c0003t0009g0010	10	318	0.0315	-1	c.68 others(6): Show c.6847delA	SPIN3	ENSG00000204271.13	transcript	ENST00000374919.6	protein_coding		3507		chrX	TogoVar
SPIN3_chrX_56985831_57000541	56990916	TA TA	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(154): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00621.hp1 HG00673.hp1 HG00733.hp2 HG00735.hp1 HG01069.hp1 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01081.hp1 HG01106.hp1 HG01123.hp1 HG01168.hp2 HG01175.hp2 HG01256.hp1 HG01261.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp2 HG01496.hp2 HG01515.hp1 HG01517.hp2 HG01934.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp2 HG01993.hp1 HG02004.hp1 HG02015.hp1 HG02056.hp1 HG02074.hp1 HG02080.hp1 HG02083.hp1 HG02109.hp1 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02155.hp2 HG02257.hp1 HG02273.hp2 HG02523.hp2 HG02572.hp1 HG02602.hp1 HG02698.hp1 HG02735.hp1 HG02738.hp1 HG02886.hp1 HG03017.hp1 HG03490.hp1 HG03492.hp1 HG03654.hp1 HG03669.hp1 HG03688.hp1 HG03710.hp1 HG03942.hp1 HG04115.hp1 HG04184.hp1 HG04199.hp1 HG06807.hp1 NA18747.hp1 NA18939.hp1 NA18939.hp2 NA18940.hp1 NA18941.hp1 NA18944.hp1 NA18945.hp1 NA18947.hp1 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18951.hp1 NA18953.hp1 NA18954.hp1 NA18955.hp1 NA18957.hp1 NA18957.hp2 NA18959.hp1 NA18960.hp1 NA18961.hp1 NA18962.hp1 NA18963.hp2 NA18965.hp1 NA18966.hp1 NA18967.hp1 NA18968.hp1 NA18968.hp2 NA18969.hp2 NA18970.hp1 NA18971.hp1 NA18977.hp1 NA18979.hp1 NA18979.hp2 NA18984.hp1 NA18985.hp1 NA18986.hp1 NA18987.hp1 NA18989.hp1 NA18990.hp1 NA18995.hp1 NA18998.hp1 NA18998.hp2 NA18999.hp1 NA19000.hp1 NA19001.hp1 NA19001.hp2 NA19002.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp1 NA19010.hp2 NA19011.hp1 NA19011.hp2 NA19043.hp1 NA19054.hp1 NA19054.hp2 NA19055.hp1 NA19056.hp1 NA19058.hp1 NA19059.hp1 NA19060.hp1 NA19062.hp1 NA19064.hp1 NA19065.hp2 NA19066.hp1 NA19067.hp1 NA19068.hp1 NA19070.hp1 NA19072.hp1 NA19074.hp2 NA19075.hp1 NA19079.hp1 NA19080.hp1 NA19082.hp1 NA19083.hp1 NA19084.hp2 NA19085.hp1 NA19087.hp1 NA19088.hp1 NA19089.hp1 NA19090.hp2 NA19091.hp1 NA20752.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0001t0004 a0001c0001t0013 others(4): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0013 a0001c0001t0015 a0001c0001t0016 a0001c0001t0021 a0001c0004t0001	a0001c0001t0001g0001 a0001c0001t0001g0025 a0001c0001t0004g0004 others(5): Show a0001c0001t0001g0001 a0001c0001t0001g0025 a0001c0001t0004g0004 a0001c0001t0013g0015 a0001c0001t0015g0017 a0001c0001t0016g0018 a0001c0001t0021g0026 a0001c0004t0001g0023	157	318	0.4937	-1	c.32 others(6): Show c.3254delT	SPIN3	ENSG00000204271.13	transcript	ENST00000374919.6	protein_coding	2/2	3254		chrX	TogoVar
SPIN3_chrX_56985831_57000541	56991195	CT CT	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA19063.hp1 NA19063.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0020	a0001c0001t0020g0022 a0001c0001t0020g0022	1	318	0.0031	-1	c.29 others(6): Show c.2975delA	SPIN3	ENSG00000204271.13	transcript	ENST00000374919.6	protein_coding	2/2	2975		chrX	TogoVar
SPIN3_chrX_56985831_57000541	56993269	AC AC	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18974.hp1 NA18974.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0009 a0002c0003t0009	a0002c0003t0009g0010 a0002c0003t0009g0010	1	318	0.0031	-1	c.90 others(5): Show c.901delG	SPIN3	ENSG00000204271.13	transcript	ENST00000374919.6	protein_coding	2/2	901		chrX	TogoVar
SPIN3_chrX_56985831_57000541	56993348	AC AC	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA19072.hp1 NA19072.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0018 a0001c0001t0016g0018	1	318	0.0031	-1	c.82 others(5): Show c.822delG	SPIN3	ENSG00000204271.13	transcript	ENST00000374919.6	protein_coding	2/2	822		chrX	TogoVar
SPIN3_chrX_56985831_57000541	56996651	AT AT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19059.hp1 NA19059.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	318	0.0031	-1	c.-14 others(6): Show c.-1439delA	SPIN3	ENSG00000204271.13	transcript	ENST00000374919.6	protein_coding		1111		chrX	TogoVar
SPIN3_chrX_56985831_57000541	56997277	CT CT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02129.hp1 HG02129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	318	0.0031	-1	c.-20 others(6): Show c.-2065delA	SPIN3	ENSG00000204271.13	transcript	ENST00000374919.6	protein_coding		1737		chrX	TogoVar
SPIN3_chrX_56985831_57000541	56997799	GA GA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19059.hp1 NA19059.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	318	0.0031	-1	c.-25 others(6): Show c.-2587delT	SPIN3	ENSG00000204271.13	transcript	ENST00000374919.6	protein_coding		2259		chrX	TogoVar
SPIN3_chrX_56985831_57000541	56997954	AG AG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18954.hp2 NA18954.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0002 a0001c0001t0002g0002	1	318	0.0031	-1	c.-27 others(6): Show c.-2742delC	SPIN3	ENSG00000204271.13	transcript	ENST00000374919.6	protein_coding		2414		chrX	TogoVar
SPIN3_chrX_56985831_57000541	56998726	TA TA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19059.hp1 NA19059.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	318	0.0031	-1	c.-35 others(6): Show c.-3514delT	SPIN3	ENSG00000204271.13	transcript	ENST00000374919.6	protein_coding		3186		chrX	TogoVar
SPIN3_chrX_56985831_57000541	56998990	AC AC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19059.hp1 NA19059.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	318	0.0031	-1	c.-37 others(6): Show c.-3778delG	SPIN3	ENSG00000204271.13	transcript	ENST00000374919.6	protein_coding		3450		chrX	TogoVar
SPIN3_chrX_56985831_57000541	56999255	AG AG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0003 a0001c0001t0003g0003	1	318	0.0031	-1	c.-40 others(6): Show c.-4043delC	SPIN3	ENSG00000204271.13	transcript	ENST00000374919.6	protein_coding		3715		chrX	TogoVar
SPIN3_chrX_56985831_57000541	56999405	TA TA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02155.hp2 NA19055.hp1 NA19059.hp1 HG02155.hp2 NA19055.hp1 NA19059.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	3	318	0.0094	-1	c.-41 others(6): Show c.-4193delT	SPIN3	ENSG00000204271.13	transcript	ENST00000374919.6	protein_coding		3865		chrX	TogoVar
SPIN3_chrX_56985831_57000541	56999742	AT AT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19059.hp1 NA19059.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	318	0.0031	-1	c.-45 others(6): Show c.-4530delA	SPIN3	ENSG00000204271.13	transcript	ENST00000374919.6	protein_coding		4202		chrX	TogoVar
SPIN3_chrX_56985831_57000541	56999900	CT CT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19059.hp1 NA19059.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	318	0.0031	-1	c.-46 others(6): Show c.-4688delA	SPIN3	ENSG00000204271.13	transcript	ENST00000374919.6	protein_coding		4360		chrX	TogoVar
SPIN3_chrX_56985831_57000541	57000168	CT CT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19059.hp1 NA19059.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	318	0.0031	-1	c.-49 others(6): Show c.-4956delA	SPIN3	ENSG00000204271.13	transcript	ENST00000374919.6	protein_coding		4628		chrX	TogoVar
SPIN4_chrX_63342228_63356332	63346901	TA TA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01070.hp1 HG01943.hp1 HG02280.hp1 others(5): Show HG01070.hp1 HG01943.hp1 HG02280.hp1 HG02572.hp1 HG02922.hp1 NA18946.hp1 NA18946.hp2 NA18962.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0000 a0001c0001t0004g0000 a0001c0001t0001g0000 a0001c0001t0004g0000	8	298	0.0269	-1	c.31 others(6): Show c.3168delT	SPIN4	ENSG00000186767.7	transcript	ENST00000374884.3	protein_coding		326		chrX	TogoVar
SPIN4_chrX_63342228_63356332	63350940	TC TC	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG00738.hp1 HG00738.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0000 a0001c0001t0009g0000	1	298	0.0034	-1	c.-12 others(5): Show c.-122delG	SPIN4	ENSG00000186767.7	transcript	ENST00000374884.3	protein_coding	1/1	122		chrX	TogoVar
SPIN4_chrX_63342228_63356332	63351822	AT AT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00639.hp1 HG00642.hp1 HG00735.hp2 others(72): Show HG00639.hp1 HG00642.hp1 HG00735.hp2 HG00738.hp1 HG01070.hp2 HG01071.hp1 HG01081.hp2 HG01167.hp1 HG01169.hp1 HG01175.hp2 HG01255.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01975.hp1 HG02055.hp1 HG02109.hp1 HG02257.hp2 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp1 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp1 HG03098.hp1 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03195.hp2 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03540.hp1 HG03540.hp2 HG03579.hp1 NA18522.hp1 NA18906.hp1 NA18906.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1 NA19057.hp2 NA19077.hp1 NA19077.hp2 NA19089.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0008 a0001c0001t0009 a0001c0001t0014	a0001c0001t0001g0000 a0001c0001t0002g0000 a0001c0001t0003g0000 others(5): Show a0001c0001t0001g0000 a0001c0001t0002g0000 a0001c0001t0003g0000 a0001c0001t0004g0000 a0001c0001t0006g0000 a0001c0001t0008g0000 a0001c0001t0009g0000 a0001c0001t0014g0000	75	298	0.2517	-1	c.-10 others(6): Show c.-1004delA	SPIN4	ENSG00000186767.7	transcript	ENST00000374884.3	protein_coding		491		chrX	TogoVar
SPIN4_chrX_63342228_63356332	63353175	CA CA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	298	0.0034	-1	c.-23 others(6): Show c.-2357delT	SPIN4	ENSG00000186767.7	transcript	ENST00000374884.3	protein_coding		1844		chrX	TogoVar
SPIN4_chrX_63342228_63356332	63355225	TA TA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00544.hp2 HG02809.hp2 HG00544.hp2 HG02809.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	2	298	0.0067	-1	c.-44 others(6): Show c.-4407delT	SPIN4	ENSG00000186767.7	transcript	ENST00000374884.3	protein_coding		3894		chrX	TogoVar
SPIN4_chrX_63342228_63356332	63355591	TA TA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19067.hp1 NA19067.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	298	0.0034	-1	c.-47 others(6): Show c.-4773delT	SPIN4	ENSG00000186767.7	transcript	ENST00000374884.3	protein_coding		4260		chrX	TogoVar

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