view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SPNS3_chr17_4428940_4493204 | 4457748 | CT | C | intron_variant | MODIFIER | HG00280.hp1 HG00642.hp2 HG01099.hp2 others(41): Show |
a0001a0003 | a0001c0001a0001c0003a0001c0006others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0003t0001others(12): Show | a0001c0001t0001g0111 a0001c0001t0001g0335 a0001c0001t0001g0343 others(41): Show |
44 | 362 | 0.1216 | -1 | c.111 others(10): Show |
SPNS3 | ENSG00000182557.8 | transcript | ENST00000355530.7 | protein_coding | 8/11 | chr17 | TogoVar | |||||||
SPNS3_chr17_4428940_4493204 | 4458506 | TC | T | intron_variant | MODIFIER | HG01074.hp1 HG02055.hp2 HG02257.hp2 others(12): Show |
a0001 | a0001c0001a0001c0004a0001c0006others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0004t0001others(3): Show | a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0149 others(12): Show |
15 | 362 | 0.0414 | -1 | c.111 others(10): Show |
SPNS3 | ENSG00000182557.8 | transcript | ENST00000355530.7 | protein_coding | 8/11 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SPNS3_chr17_4428940_4493204 | 4458540 | CT | C | intron_variant | MODIFIER | HG00609.hp2 HG00639.hp1 HG00738.hp2 others(51): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0003a0001c0007others(11): Show | a0001c0001t0001a0001c0001t0002a0001c0003t0002others(14): Show | a0001c0001t0001g0240 a0001c0001t0001g0263 a0001c0001t0001g0266 others(51): Show |
54 | 362 | 0.1492 | -1 | c.111 others(10): Show |
SPNS3 | ENSG00000182557.8 | transcript | ENST00000355530.7 | protein_coding | 8/11 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SPNS3_chr17_4428940_4493204 | 4460429 | AT | A | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00323.hp2 others(130): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0003a0001c0006others(32): Show | a0001c0001t0001a0001c0001t0002a0001c0003t0001others(40): Show | a0001c0001t0001g0032 a0001c0001t0001g0111 a0001c0001t0001g0136 others(130): Show |
133 | 362 | 0.3674 | -1 | c.111 others(10): Show |
SPNS3 | ENSG00000182557.8 | transcript | ENST00000355530.7 | protein_coding | 8/11 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SPNS3_chr17_4428940_4493204 | 4460607 | AT | A | intron_variant | MODIFIER | HG00673.hp2 HG01361.hp1 HG02922.hp2 others(9): Show |
a0001a0003 | a0001c0001a0001c0003a0001c0004others(3): Show | a0001c0001t0001a0001c0003t0001a0001c0004t0001others(3): Show | a0001c0001t0001g0113 a0001c0001t0001g0156 a0001c0001t0001g0220 others(9): Show |
12 | 362 | 0.0332 | -1 | c.111 others(10): Show |
SPNS3 | ENSG00000182557.8 | transcript | ENST00000355530.7 | protein_coding | 8/11 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SPNS3_chr17_4428940_4493204 | 4461361 | CT | C | intron_variant | MODIFIER | HG00099.hp2 HG00544.hp2 HG00609.hp2 others(109): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0003a0001c0004others(24): Show | a0001c0001t0001a0001c0001t0002a0001c0003t0001others(29): Show | a0001c0001t0001g0105 a0001c0001t0001g0131 a0001c0001t0001g0132 others(109): Show |
112 | 362 | 0.3094 | -1 | c.111 others(10): Show |
SPNS3 | ENSG00000182557.8 | transcript | ENST00000355530.7 | protein_coding | 8/11 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SPNS3_chr17_4428940_4493204 | 4463738 | GA | G | intron_variant | MODIFIER | HG01169.hp2 HG01975.hp2 HG02145.hp1 others(5): Show |
a0001a0003 | a0001c0001a0001c0003a0001c0046others(2): Show | a0001c0001t0001a0001c0003t0001a0001c0046t0002others(2): Show | a0001c0001t0001g0098 a0001c0001t0001g0206 a0001c0003t0001g0147 others(5): Show |
8 | 362 | 0.0221 | -1 | c.111 others(11): Show |
SPNS3 | ENSG00000182557.8 | transcript | ENST00000355530.7 | protein_coding | 8/11 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SPNS3_chr17_4428940_4493204 | 4464671 | CT | C | intron_variant | MODIFIER | HG02809.hp2 HG02818.hp2 HG03209.hp2 |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0003t0002 | a0001c0001t0001g0044 a0001c0001t0002g0341 a0001c0003t0002g0129 |
3 | 362 | 0.0083 | -1 | c.111 others(11): Show |
SPNS3 | ENSG00000182557.8 | transcript | ENST00000355530.7 | protein_coding | 8/11 | chr17 | TogoVar | |||||||
SPNS3_chr17_4428940_4493204 | 4466539 | CA | C | intron_variant | MODIFIER | HG00741.hp2 HG01109.hp1 HG01175.hp2 others(37): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0003a0001c0004others(14): Show | a0001c0001t0001a0001c0001t0002a0001c0003t0001others(17): Show | a0001c0001t0001g0132 a0001c0001t0001g0200 a0001c0001t0001g0217 others(37): Show |
40 | 362 | 0.1105 | -1 | c.111 others(11): Show |
SPNS3 | ENSG00000182557.8 | transcript | ENST00000355530.7 | protein_coding | 8/11 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SPNS3_chr17_4428940_4493204 | 4469620 | CA | C | intron_variant | MODIFIER | HG01169.hp1 HG01169.hp2 HG01256.hp2 others(4): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0036a0002c0002others(4): Show | a0001c0001t0002a0001c0036t0003a0002c0002t0001others(4): Show | a0001c0001t0002g0340 a0001c0036t0003g0146 a0002c0002t0001g0268 others(4): Show |
7 | 362 | 0.0193 | -1 | c.111 others(10): Show |
SPNS3 | ENSG00000182557.8 | transcript | ENST00000355530.7 | protein_coding | 8/11 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SPNS3_chr17_4428940_4493204 | 4472774 | CT | C | intron_variant | MODIFIER | HG00099.hp2 HG01358.hp1 HG02622.hp2 others(9): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0003a0001c0006others(5): Show | a0001c0001t0002a0001c0003t0001a0001c0006t0001others(5): Show | a0001c0001t0002g0317 a0001c0003t0001g0346 a0001c0006t0001g0042 others(9): Show |
12 | 362 | 0.0332 | -1 | c.111 others(10): Show |
SPNS3 | ENSG00000182557.8 | transcript | ENST00000355530.7 | protein_coding | 8/11 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SPNS3_chr17_4428940_4493204 | 4473393 | CT | C | intron_variant | MODIFIER | HG00673.hp2 HG01069.hp2 HG01358.hp2 others(10): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0003a0001c0006others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0003t0001others(9): Show | a0001c0001t0001g0224 a0001c0001t0002g0164 a0001c0003t0001g0320 others(10): Show |
13 | 362 | 0.0359 | -1 | c.111 others(10): Show |
SPNS3 | ENSG00000182557.8 | transcript | ENST00000355530.7 | protein_coding | 8/11 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SPNS3_chr17_4428940_4493204 | 4477970 | CT | C | intron_variant | MODIFIER | HG02280.hp1 HG02486.hp1 HG02647.hp2 others(6): Show |
a0001 | a0001c0001a0001c0009a0001c0031others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0009t0002others(2): Show | a0001c0001t0001g0026 a0001c0001t0001g0181 a0001c0001t0002g0326 others(6): Show |
9 | 362 | 0.0249 | -1 | c.111 others(9): Show |
SPNS3 | ENSG00000182557.8 | transcript | ENST00000355530.7 | protein_coding | 8/11 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SPNS3_chr17_4428940_4493204 | 4481883 | TC | T | intron_variant | MODIFIER | HG01109.hp1 HG02055.hp2 HG02615.hp2 others(10): Show |
a0001a0004 | a0001c0001a0001c0003a0001c0007others(4): Show | a0001c0001t0002a0001c0003t0002a0001c0007t0003others(4): Show | a0001c0001t0002g0162 a0001c0001t0002g0317 a0001c0001t0002g0327 others(10): Show |
13 | 362 | 0.0359 | -1 | c.117 others(10): Show |
SPNS3 | ENSG00000182557.8 | transcript | ENST00000355530.7 | protein_coding | 9/11 | chr17 | TogoVar | |||||||
SPNS3_chr17_4428940_4493204 | 4487167 | CA | C | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp2 HG00438.hp2 others(63): Show |
a0001a0002a0003 | a0001c0001a0001c0003a0001c0004others(19): Show | a0001c0001t0001a0001c0001t0002a0001c0003t0001others(25): Show | a0001c0001t0001g0181 a0001c0001t0001g0191 a0001c0001t0001g0245 others(63): Show |
66 | 362 | 0.1823 | -1 | c.145 others(9): Show |
SPNS3 | ENSG00000182557.8 | transcript | ENST00000355530.7 | protein_coding | 11/11 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SPNS3_chr17_4428940_4493204 | 4490018 | TA | T | downstream_gene_variant | MODIFIER | HG02647.hp2 HG02717.hp1 HG02818.hp1 others(10): Show |
a0001a0002a0004 | a0001c0001a0001c0003a0001c0004others(8): Show | a0001c0001t0001a0001c0003t0002a0001c0004t0001others(8): Show | a0001c0001t0001g0097 a0001c0001t0001g0136 a0001c0003t0002g0114 others(10): Show |
13 | 362 | 0.0359 | -1 | c.*21 others(6): Show |
SPNS3 | ENSG00000182557.8 | transcript | ENST00000355530.7 | protein_coding | 1815 | chr17 | TogoVar | |||||||
SPNS3_chr17_4428940_4493204 | 4491129 | CT | C | downstream_gene_variant | MODIFIER | HG00438.hp2 HG00738.hp2 HG00741.hp1 others(65): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0003a0001c0006others(15): Show | a0001c0001t0002a0001c0003t0002a0001c0006t0001others(16): Show | a0001c0001t0002g0037 a0001c0001t0002g0137 a0001c0001t0002g0145 others(65): Show |
68 | 362 | 0.1879 | -1 | c.*32 others(6): Show |
SPNS3 | ENSG00000182557.8 | transcript | ENST00000355530.7 | protein_coding | 2926 | chr17 | TogoVar | |||||||
SPNS3_chr17_4428940_4493204 | 4492485 | GA | G | downstream_gene_variant | MODIFIER | HG00438.hp2 HG00738.hp2 HG00741.hp1 others(61): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0003a0001c0006others(15): Show | a0001c0001t0002a0001c0003t0002a0001c0006t0001others(16): Show | a0001c0001t0002g0037 a0001c0001t0002g0137 a0001c0001t0002g0145 others(61): Show |
64 | 362 | 0.1768 | -1 | c.*45 others(6): Show |
SPNS3 | ENSG00000182557.8 | transcript | ENST00000355530.7 | protein_coding | 4282 | chr17 | TogoVar | |||||||
SPN_chr16_29658247_29675876 | 29658410 | CT | C | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00280.hp2 HG00323.hp1 others(112): Show |
a0001a0004a0007 | a0001c0001a0001c0002a0001c0008others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(46): Show | a0001c0001t0001g0002 a0001c0001t0002g0002 a0001c0001t0004g0002 others(47): Show |
115 | 394 | 0.2919 | -1 | c.-49 others(6): Show |
SPN | ENSG00000197471.12 | transcript | ENST00000652691.1 | protein_coding | 4836 | chr16 | TogoVar | |||||||
SPN_chr16_29658247_29675876 | 29659432 | CA | C | upstream_gene_variant | MODIFIER | HG00621.hp1 HG01099.hp2 HG01516.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0003a0001c0001t0010a0001c0001t0011others(5): Show | a0001c0001t0003g0002 a0001c0001t0010g0001 a0001c0001t0011g0002 others(5): Show |
8 | 394 | 0.0203 | -1 | c.-39 others(6): Show |
SPN | ENSG00000197471.12 | transcript | ENST00000652691.1 | protein_coding | 3814 | chr16 | TogoVar | |||||||
SPN_chr16_29658247_29675876 | 29666383 | GA | G | 3_prime_UTR_variant | MODIFIER | HG02630.hp1 HG03486.hp2 HG03540.hp2 |
a0001 | a0001c0006 | a0001c0006t0057a0001c0006t0166 | a0001c0006t0057g0001 a0001c0006t0166g0001 |
3 | 394 | 0.0076 | -1 | c.*14 others(6): Show |
SPN | ENSG00000197471.12 | transcript | ENST00000652691.1 | protein_coding | 2/2 | 1457 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
SPN_chr16_29658247_29675876 | 29668605 | AT | A | 3_prime_UTR_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00280.hp2 others(340): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0002a0001c0006others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(161): Show | a0001c0001t0001g0002 a0001c0001t0002g0002 a0001c0001t0004g0001 others(164): Show |
343 | 394 | 0.8706 | -1 | c.*36 others(6): Show |
SPN | ENSG00000197471.12 | transcript | ENST00000652691.1 | protein_coding | 2/2 | 3685 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | |||||
SPN_chr16_29658247_29675876 | 29671915 | CA | C | downstream_gene_variant | MODIFIER | HG01256.hp1 HG02723.hp2 HG02895.hp1 others(7): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0019a0001c0001t0022a0001c0001t0023others(7): Show | a0001c0001t0019g0001 a0001c0001t0022g0002 a0001c0001t0023g0002 others(7): Show |
10 | 394 | 0.0254 | -1 | c.*69 others(6): Show |
SPN | ENSG00000197471.12 | transcript | ENST00000652691.1 | protein_coding | 1040 | chr16 | TogoVar | |||||||
SPN_chr16_29658247_29675876 | 29672462 | CT | C | downstream_gene_variant | MODIFIER | HG01106.hp2 HG01243.hp1 HG01515.hp1 others(16): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0006others(2): Show | a0001c0001t0056a0001c0001t0066a0001c0001t0088others(12): Show | a0001c0001t0056g0001 a0001c0001t0066g0001 a0001c0001t0088g0001 others(12): Show |
19 | 394 | 0.0482 | -1 | c.*75 others(6): Show |
SPN | ENSG00000197471.12 | transcript | ENST00000652691.1 | protein_coding | 1587 | chr16 | TogoVar | |||||||
SPN_chr16_29658247_29675876 | 29673108 | CT | C | downstream_gene_variant | MODIFIER | HG02109.hp1 HG02723.hp2 HG02809.hp2 others(6): Show |
a0001 | a0001c0001a0001c0009 | a0001c0001t0041a0001c0001t0066a0001c0001t0086others(5): Show | a0001c0001t0041g0001 a0001c0001t0066g0001 a0001c0001t0086g0001 others(5): Show |
9 | 394 | 0.0228 | -1 | c.*81 others(6): Show |
SPN | ENSG00000197471.12 | transcript | ENST00000652691.1 | protein_coding | 2233 | chr16 | TogoVar | |||||||
SPN_chr16_29658247_29675876 | 29673914 | CA | C | downstream_gene_variant | MODIFIER | HG00280.hp1 HG00323.hp2 HG00408.hp2 others(199): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0005others(7): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(93): Show | a0001c0001t0001g0002 a0001c0001t0003g0002 a0001c0001t0004g0001 others(95): Show |
202 | 394 | 0.5127 | -1 | c.*89 others(6): Show |
SPN | ENSG00000197471.12 | transcript | ENST00000652691.1 | protein_coding | 3039 | chr16 | TogoVar | |||||||
SPN_chr16_29658247_29675876 | 29673930 | AG | A | downstream_gene_variant | MODIFIER | HG00733.hp2 NA18960.hp1 NA19074.hp1 |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0017a0001c0001t0033 | a0001c0001t0002g0002 a0001c0001t0017g0002 a0001c0001t0033g0002 |
3 | 394 | 0.0076 | -1 | c.*90 others(6): Show |
SPN | ENSG00000197471.12 | transcript | ENST00000652691.1 | protein_coding | 3055 | chr16 | TogoVar | |||||||
SPO11_chr20_57324803_57348993 | 57326252 | GC | G | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00597.hp1 HG01071.hp2 others(26): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0006 | a0001c0001t0001g0001 a0001c0001t0001g0020 a0001c0001t0002g0003 others(4): Show |
29 | 322 | 0.0901 | -1 | c.-36 others(6): Show |
SPO11 | ENSG00000054796.13 | transcript | ENST00000371263.8 | protein_coding | 3550 | chr20 | TogoVar | |||||||
SPO11_chr20_57324803_57348993 | 57327873 | CA | C | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00438.hp2 HG00558.hp1 others(154): Show |
a0001a0003a0005 | a0001c0001a0003c0004a0005c0006 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(4): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0005 others(36): Show |
157 | 322 | 0.4876 | -1 | c.-19 others(6): Show |
SPO11 | ENSG00000054796.13 | transcript | ENST00000371263.8 | protein_coding | 1929 | chr20 | TogoVar | |||||||
SPO11_chr20_57324803_57348993 | 57328890 | TA | T | upstream_gene_variant | MODIFIER | HG00738.hp1 HG01243.hp1 HG01884.hp2 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0031 others(3): Show |
8 | 322 | 0.0248 | -1 | c.-97 others(5): Show |
SPO11 | ENSG00000054796.13 | transcript | ENST00000371263.8 | protein_coding | 912 | chr20 | TogoVar | |||||||
SPO11_chr20_57324803_57348993 | 57328907 | AT | A | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00558.hp1 HG00597.hp1 others(151): Show |
a0001a0003a0005 | a0001c0001a0003c0004a0005c0006 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(4): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0005 others(35): Show |
154 | 322 | 0.4783 | -1 | c.-96 others(5): Show |
SPO11 | ENSG00000054796.13 | transcript | ENST00000371263.8 | protein_coding | 895 | chr20 | TogoVar | |||||||
SPO11_chr20_57324803_57348993 | 57331007 | TC | T | intron_variant | MODIFIER | NA18941.hp1 NA18984.hp1 NA18995.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0025 a0001c0001t0001g0042 a0001c0001t0001g0043 |
4 | 322 | 0.0124 | -1 | c.132 others(8): Show |
SPO11 | ENSG00000054796.13 | transcript | ENST00000371263.8 | protein_coding | 1/12 | chr20 | TogoVar | |||||||
SPO11_chr20_57324803_57348993 | 57334155 | AT | A | intron_variant | MODIFIER | HG00558.hp1 HG01099.hp1 HG01192.hp1 others(24): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0001a0001c0001t0002a0002c0003t0001 | a0001c0001t0001g0009 a0001c0001t0001g0015 a0001c0001t0001g0016 others(10): Show |
27 | 322 | 0.0839 | -1 | c.510 others(7): Show |
SPO11 | ENSG00000054796.13 | transcript | ENST00000371263.8 | protein_coding | 5/12 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
SPO11_chr20_57324803_57348993 | 57337724 | AT | A | intron_variant | MODIFIER | HG00280.hp1 HG01070.hp2 HG01071.hp1 others(13): Show |
a0001 | a0001c0002 | a0001c0002t0004 | a0001c0002t0004g0013 a0001c0002t0004g0018 a0001c0002t0004g0019 others(6): Show |
16 | 322 | 0.0497 | -1 | c.745 others(8): Show |
SPO11 | ENSG00000054796.13 | transcript | ENST00000371263.8 | protein_coding | 8/12 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
SPOCD1_chr1_31785422_31821022 | 31786363 | AC | A | downstream_gene_variant | MODIFIER | HG00423.hp1 NA18961.hp1 NA18966.hp1 |
a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0219 a0002c0002t0002g0237 a0002c0002t0002g0238 |
3 | 260 | 0.0115 | -1 | c.*42 others(6): Show |
SPOCD1 | ENSG00000134668.13 | transcript | ENST00000360482.7 | protein_coding | 4058 | chr1 | TogoVar | |||||||
SPOCD1_chr1_31785422_31821022 | 31786539 | AC | A | downstream_gene_variant | MODIFIER | HG00639.hp2 HG02055.hp2 HG02922.hp2 others(1): Show |
a0001a0011 | a0001c0001a0011c0020 | a0001c0001t0001a0011c0020t0001 | a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 others(1): Show |
4 | 260 | 0.0154 | -1 | c.*40 others(6): Show |
SPOCD1 | ENSG00000134668.13 | transcript | ENST00000360482.7 | protein_coding | 3882 | chr1 | TogoVar | |||||||
SPOCD1_chr1_31785422_31821022 | 31803578 | GA | G | intron_variant | MODIFIER | HG00099.hp2 HG00323.hp1 HG00323.hp2 others(175): Show |
a0001a0002a0003others(14): Show | a0001c0001a0001c0006a0001c0009others(18): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(22): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0006 others(170): Show |
178 | 260 | 0.6846 | -1 | c.138 others(10): Show |
SPOCD1 | ENSG00000134668.13 | transcript | ENST00000360482.7 | protein_coding | 2/15 | chr1 | TogoVar | |||||||
SPOCD1_chr1_31785422_31821022 | 31804802 | TA | T | intron_variant | MODIFIER | HG01099.hp2 HG01515.hp2 HG02083.hp2 others(4): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0009a0002c0002others(3): Show | a0001c0001t0001a0001c0009t0001a0002c0002t0002others(4): Show | a0001c0001t0001g0041 a0001c0009t0001g0248 a0002c0002t0002g0196 others(4): Show |
7 | 260 | 0.0269 | -1 | c.138 others(10): Show |
SPOCD1 | ENSG00000134668.13 | transcript | ENST00000360482.7 | protein_coding | 2/15 | chr1 | TogoVar | |||||||
SPOCD1_chr1_31785422_31821022 | 31805567 | AT | A | intron_variant | MODIFIER | HG01099.hp1 HG01169.hp1 HG01952.hp1 others(1): Show |
a0002a0003a0005 | a0002c0002a0003c0003a0005c0005 | a0002c0002t0001a0002c0002t0002a0003c0003t0001others(1): Show | a0002c0002t0001g0203 a0002c0002t0002g0233 a0003c0003t0001g0079 others(1): Show |
4 | 260 | 0.0154 | -1 | c.138 others(10): Show |
SPOCD1 | ENSG00000134668.13 | transcript | ENST00000360482.7 | protein_coding | 2/15 | chr1 | TogoVar | |||||||
SPOCD1_chr1_31785422_31821022 | 31806547 | CT | C | intron_variant | MODIFIER | HG00639.hp1 HG01099.hp1 HG01515.hp1 others(6): Show |
a0001a0002a0003others(2): Show | a0001c0001a0002c0002a0003c0003others(2): Show | a0001c0001t0001a0002c0002t0002a0003c0003t0001others(2): Show | a0001c0001t0001g0031 a0001c0001t0001g0041 a0001c0001t0001g0172 others(6): Show |
9 | 260 | 0.0346 | -1 | c.138 others(10): Show |
SPOCD1 | ENSG00000134668.13 | transcript | ENST00000360482.7 | protein_coding | 2/15 | chr1 | TogoVar | |||||||
SPOCD1_chr1_31785422_31821022 | 31807363 | TG | T | intron_variant | MODIFIER | HG00741.hp1 HG01261.hp2 NA18962.hp1 others(1): Show |
a0002a0003 | a0002c0002a0003c0003 | a0002c0002t0001a0002c0002t0002a0003c0003t0002 | a0002c0002t0001g0189 a0002c0002t0002g0071 a0002c0002t0002g0214 others(1): Show |
4 | 260 | 0.0154 | -1 | c.138 others(10): Show |
SPOCD1 | ENSG00000134668.13 | transcript | ENST00000360482.7 | protein_coding | 2/15 | chr1 | TogoVar | |||||||
SPOCD1_chr1_31785422_31821022 | 31817119 | TA | T | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00639.hp1 HG00673.hp2 others(24): Show |
a0003a0004a0012 | a0003c0003a0004c0004a0012c0013 | a0003c0003t0001a0003c0003t0002a0003c0003t0004others(2): Show | a0003c0003t0001g0075 a0003c0003t0001g0095 a0003c0003t0001g0096 others(24): Show |
27 | 260 | 0.1039 | -1 | c.-11 others(6): Show |
SPOCD1 | ENSG00000134668.13 | transcript | ENST00000360482.7 | protein_coding | 1098 | chr1 | TogoVar | |||||||
SPOCD1_chr1_31785422_31821022 | 31817120 | AT | A | upstream_gene_variant | MODIFIER | HG00408.hp1 HG00544.hp2 HG00621.hp1 others(37): Show |
a0003a0006a0008others(1): Show | a0003c0003a0006c0007a0008c0010others(1): Show | a0003c0003t0001a0003c0003t0002a0006c0007t0001others(2): Show | a0003c0003t0001g0003 a0003c0003t0001g0073 a0003c0003t0001g0078 others(35): Show |
40 | 260 | 0.1539 | -1 | c.-12 others(6): Show |
SPOCD1 | ENSG00000134668.13 | transcript | ENST00000360482.7 | protein_coding | 1099 | chr1 | TogoVar | |||||||
SPOCD1_chr1_31785422_31821022 | 31817932 | AT | A | upstream_gene_variant | MODIFIER | HG01243.hp1 HG01243.hp2 HG02280.hp1 others(9): Show |
a0001 | a0001c0001a0001c0006 | a0001c0001t0001a0001c0001t0002a0001c0006t0001 | a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 others(9): Show |
12 | 260 | 0.0462 | -1 | c.-20 others(6): Show |
SPOCD1 | ENSG00000134668.13 | transcript | ENST00000360482.7 | protein_coding | 1911 | chr1 | TogoVar | |||||||
SPOCD1_chr1_31785422_31821022 | 31818059 | GA | G | upstream_gene_variant | MODIFIER | HG01255.hp1 HG02109.hp2 HG02572.hp1 others(9): Show |
a0001 | a0001c0001a0001c0015a0001c0023 | a0001c0001t0001a0001c0015t0001a0001c0023t0001 | a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 others(9): Show |
12 | 260 | 0.0462 | -1 | c.-21 others(6): Show |
SPOCD1 | ENSG00000134668.13 | transcript | ENST00000360482.7 | protein_coding | 2038 | chr1 | TogoVar | |||||||
SPOCD1_chr1_31785422_31821022 | 31819273 | TA | T | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00323.hp1 HG00323.hp2 others(172): Show |
a0001a0002a0005others(9): Show | a0001c0001a0001c0006a0001c0009others(13): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(16): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0006 others(168): Show |
175 | 260 | 0.6731 | -1 | c.-33 others(6): Show |
SPOCD1 | ENSG00000134668.13 | transcript | ENST00000360482.7 | protein_coding | 3252 | chr1 | TogoVar | |||||||
SPOCK1_chr5_136970298_137504326 | 136971558 | CT | C | downstream_gene_variant | MODIFIER | HG00408.hp2 HG01496.hp1 HG02559.hp1 others(6): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(3): Show | a0001c0001t0001g0026 a0001c0001t0002g0112 a0001c0001t0002g0119 others(6): Show |
9 | 152 | 0.0592 | -1 | c.*70 others(6): Show |
SPOCK1 | ENSG00000152377.15 | transcript | ENST00000394945.6 | protein_coding | 3739 | chr5 | TogoVar | |||||||
SPOCK1_chr5_136970298_137504326 | 136971966 | CT | C | downstream_gene_variant | MODIFIER | HG01099.hp1 HG01884.hp2 HG02280.hp2 others(14): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0007others(10): Show | a0001c0001t0001g0074 a0001c0001t0002g0105 a0001c0001t0002g0112 others(14): Show |
17 | 152 | 0.1118 | -1 | c.*66 others(6): Show |
SPOCK1 | ENSG00000152377.15 | transcript | ENST00000394945.6 | protein_coding | 3331 | chr5 | TogoVar | |||||||
SPOCK1_chr5_136970298_137504326 | 136977331 | AG | A | 3_prime_UTR_variant | MODIFIER | HG00408.hp2 HG00558.hp2 HG01099.hp2 others(23): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0008a0001c0001t0011others(2): Show | a0001c0001t0004g0020 a0001c0001t0004g0021 a0001c0001t0004g0033 others(23): Show |
26 | 152 | 0.1711 | -1 | c.*13 others(6): Show |
SPOCK1 | ENSG00000152377.15 | transcript | ENST00000394945.6 | protein_coding | 11/11 | 1322 | chr5 | TogoVar | ||||||
SPOCK1_chr5_136970298_137504326 | 136979511 | AT | A | intron_variant | MODIFIER | HG00280.hp1 HG00280.hp2 HG00408.hp2 others(80): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0003a0001c0001t0004a0001c0001t0005others(28): Show | a0001c0001t0003g0004 a0001c0001t0003g0016 a0001c0001t0003g0023 others(80): Show |
83 | 152 | 0.5461 | -1 | c.992 others(7): Show |
SPOCK1 | ENSG00000152377.15 | transcript | ENST00000394945.6 | protein_coding | 9/10 | chr5 | TogoVar |