view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SLC1A3_chr5_36601606_36693334 | 36612606 | AT | A | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(44): Show |
a0001a0003 | a0001c0001a0001c0013a0003c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0011 a0001c0001t0001g0015 a0001c0001t0001g0017 others(44): Show |
47 | 380 | 0.1237 | -1 | c.181 others(9): Show |
SLC1A3 | ENSG00000079215.15 | transcript | ENST00000265113.9 | protein_coding | 2/9 | chr5 | TogoVar | |||||||
SLC1A3_chr5_36601606_36693334 | 36613882 | CT | C | intron_variant | MODIFIER | HG01346.hp2 HG02109.hp1 HG02895.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0008a0001c0001t0016 | a0001c0001t0001g0107 a0001c0001t0008g0105 a0001c0001t0008g0108 others(1): Show |
4 | 380 | 0.0105 | -1 | c.181 others(9): Show |
SLC1A3 | ENSG00000079215.15 | transcript | ENST00000265113.9 | protein_coding | 2/9 | chr5 | TogoVar | |||||||
SLC1A3_chr5_36601606_36693334 | 36617415 | CT | C | intron_variant | MODIFIER | HG00140.hp1 HG00323.hp1 HG00323.hp2 others(151): Show |
a0001a0002a0003others(5): Show | a0001c0001a0002c0002a0003c0004others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(18): Show | a0001c0001t0001g0043 a0001c0001t0001g0068 a0001c0001t0001g0075 others(150): Show |
154 | 380 | 0.4053 | -1 | c.181 others(9): Show |
SLC1A3 | ENSG00000079215.15 | transcript | ENST00000265113.9 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SLC1A3_chr5_36601606_36693334 | 36623014 | CA | C | intron_variant | MODIFIER | HG00408.hp1 HG00621.hp2 HG01517.hp2 others(16): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0008 a0001c0001t0001g0087 a0001c0001t0001g0094 others(16): Show |
19 | 380 | 0.0500 | -1 | c.182 others(9): Show |
SLC1A3 | ENSG00000079215.15 | transcript | ENST00000265113.9 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SLC1A3_chr5_36601606_36693334 | 36623862 | CA | C | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00323.hp1 others(313): Show |
a0001a0002a0003others(6): Show | a0001c0001a0001c0003a0001c0012others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(36): Show | a0001c0001t0001g0002 a0001c0001t0001g0008 a0001c0001t0001g0017 others(311): Show |
316 | 380 | 0.8316 | -1 | c.182 others(9): Show |
SLC1A3 | ENSG00000079215.15 | transcript | ENST00000265113.9 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SLC1A3_chr5_36601606_36693334 | 36629427 | CT | C | splice_region_variant others(1): Show |
LOW | HG00099.hp2 HG00673.hp2 HG03927.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0003 | a0001c0001t0002g0021 a0001c0001t0002g0318 a0001c0001t0003g0065 others(4): Show |
7 | 380 | 0.0184 | -1 | c.182 others(6): Show |
SLC1A3 | ENSG00000079215.15 | transcript | ENST00000265113.9 | protein_coding | 2/9 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SLC1A3_chr5_36601606_36693334 | 36632139 | AG | A | intron_variant | MODIFIER | HG02258.hp1 HG02280.hp2 HG03209.hp1 |
a0001a0007 | a0001c0001a0007c0007 | a0001c0001t0001a0001c0001t0005a0007c0007t0004 | a0001c0001t0001g0134 a0001c0001t0005g0135 a0007c0007t0004g0136 |
3 | 380 | 0.0079 | -1 | c.319 others(9): Show |
SLC1A3 | ENSG00000079215.15 | transcript | ENST00000265113.9 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SLC1A3_chr5_36601606_36693334 | 36635173 | GA | G | intron_variant | MODIFIER | HG02683.hp1 HG02735.hp1 HG03491.hp2 others(3): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0002a0002c0002t0003 | a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0002g0093 others(3): Show |
6 | 380 | 0.0158 | -1 | c.319 others(9): Show |
SLC1A3 | ENSG00000079215.15 | transcript | ENST00000265113.9 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SLC1A3_chr5_36601606_36693334 | 36635563 | AC | A | intron_variant | MODIFIER | HG02055.hp1 HG02109.hp2 HG02280.hp1 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(3): Show | a0001c0001t0001g0002 a0001c0001t0001g0062 a0001c0001t0001g0166 others(8): Show |
12 | 380 | 0.0316 | -1 | c.319 others(9): Show |
SLC1A3 | ENSG00000079215.15 | transcript | ENST00000265113.9 | protein_coding | 3/9 | chr5 | TogoVar | |||||||
SLC1A3_chr5_36601606_36693334 | 36636600 | CT | C | intron_variant | MODIFIER | HG00099.hp1 HG00323.hp1 HG00423.hp1 others(157): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0012a0002c0002others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(18): Show | a0001c0001t0001g0011 a0001c0001t0001g0015 a0001c0001t0001g0047 others(156): Show |
160 | 380 | 0.4211 | -1 | c.319 others(9): Show |
SLC1A3 | ENSG00000079215.15 | transcript | ENST00000265113.9 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SLC1A3_chr5_36601606_36693334 | 36641336 | AC | A | intron_variant | MODIFIER | HG02572.hp1 HG03225.hp2 NA18522.hp1 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0017a0002c0002t0004 | a0001c0001t0017g0113 a0002c0002t0004g0114 a0002c0002t0004g0115 |
3 | 380 | 0.0079 | -1 | c.319 others(10): Show |
SLC1A3 | ENSG00000079215.15 | transcript | ENST00000265113.9 | protein_coding | 3/9 | chr5 | TogoVar | |||||||
SLC1A3_chr5_36601606_36693334 | 36645319 | CT | C | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00408.hp2 others(154): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0003a0001c0012others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(20): Show | a0001c0001t0001g0020 a0001c0001t0001g0034 a0001c0001t0001g0043 others(153): Show |
157 | 380 | 0.4132 | -1 | c.319 others(10): Show |
SLC1A3 | ENSG00000079215.15 | transcript | ENST00000265113.9 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SLC1A3_chr5_36601606_36693334 | 36651141 | TA | T | intron_variant | MODIFIER | HG00621.hp1 HG00738.hp1 HG01070.hp2 others(38): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(10): Show | a0001c0001t0001g0107 a0001c0001t0001g0128 a0001c0001t0001g0140 others(38): Show |
41 | 380 | 0.1079 | -1 | c.320 others(10): Show |
SLC1A3 | ENSG00000079215.15 | transcript | ENST00000265113.9 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SLC1A3_chr5_36601606_36693334 | 36663380 | AT | A | intron_variant | MODIFIER | HG00140.hp1 HG00438.hp2 HG00673.hp1 others(42): Show |
a0001a0002a0010 | a0001c0001a0002c0002a0010c0006 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0001 a0001c0001t0001g0033 a0001c0001t0001g0078 others(41): Show |
45 | 380 | 0.1184 | -1 | c.320 others(9): Show |
SLC1A3 | ENSG00000079215.15 | transcript | ENST00000265113.9 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SLC1A3_chr5_36601606_36693334 | 36664434 | AT | A | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(282): Show |
a0001a0002a0003others(7): Show | a0001c0001a0001c0003a0001c0013others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(32): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0008 others(279): Show |
285 | 380 | 0.7500 | -1 | c.320 others(9): Show |
SLC1A3 | ENSG00000079215.15 | transcript | ENST00000265113.9 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SLC1A3_chr5_36601606_36693334 | 36669958 | TA | T | intron_variant | MODIFIER | HG01109.hp1 HG01891.hp2 HG02055.hp1 others(20): Show |
a0001 | a0001c0001a0001c0012 | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(6): Show | a0001c0001t0001g0002 a0001c0001t0001g0124 a0001c0001t0001g0157 others(19): Show |
23 | 380 | 0.0605 | -1 | c.320 others(9): Show |
SLC1A3 | ENSG00000079215.15 | transcript | ENST00000265113.9 | protein_coding | 3/9 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SLC1A3_chr5_36601606_36693334 | 36671065 | TG | T | frameshift_variant | HIGH | NA18987.hp1 | a0009 | a0009c0005 | a0009c0005t0002 | a0009c0005t0002g0237 | 1 | 380 | 0.0026 | -1 | c.359 others(4): Show |
p.Gly others(5): Show |
SLC1A3 | ENSG00000079215.15 | transcript | ENST00000265113.9 | protein_coding | 4/10 | 584/3919 | 359/1629 | 120/542 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||
SLC1A3_chr5_36601606_36693334 | 36674503 | GT | G | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(224): Show |
a0001a0004 | a0001c0001a0001c0003a0001c0012others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(23): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0008 others(222): Show |
227 | 380 | 0.5974 | -1 | c.567 others(8): Show |
SLC1A3 | ENSG00000079215.15 | transcript | ENST00000265113.9 | protein_coding | 5/9 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SLC1A3_chr5_36601606_36693334 | 36680914 | TC | T | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00423.hp1 others(89): Show |
a0001a0002a0004 | a0001c0001a0001c0003a0002c0002others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(10): Show | a0001c0001t0001g0101 a0001c0001t0001g0134 a0001c0001t0001g0254 others(89): Show |
92 | 380 | 0.2421 | -1 | c.128 others(9): Show |
SLC1A3 | ENSG00000079215.15 | transcript | ENST00000265113.9 | protein_coding | 8/9 | chr5 | TogoVar | |||||||
SLC1A3_chr5_36601606_36693334 | 36680915 | CA | C | intron_variant | MODIFIER | HG00558.hp1 HG00673.hp1 HG01081.hp2 others(66): Show |
a0001a0008 | a0001c0001a0008c0011 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(11): Show | a0001c0001t0001g0008 a0001c0001t0001g0034 a0001c0001t0001g0036 others(66): Show |
69 | 380 | 0.1816 | -1 | c.128 others(9): Show |
SLC1A3 | ENSG00000079215.15 | transcript | ENST00000265113.9 | protein_coding | 8/9 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SLC1A3_chr5_36601606_36693334 | 36683400 | AT | A | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00423.hp1 others(117): Show |
a0001a0002a0004others(1): Show | a0001c0001a0001c0003a0002c0002others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(17): Show | a0001c0001t0001g0134 a0001c0001t0001g0149 a0001c0001t0001g0365 others(117): Show |
120 | 380 | 0.3158 | -1 | c.129 others(9): Show |
SLC1A3 | ENSG00000079215.15 | transcript | ENST00000265113.9 | protein_coding | 8/9 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SLC1A3_chr5_36601606_36693334 | 36683707 | CA | C | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(299): Show |
a0001a0002a0003others(6): Show | a0001c0001a0001c0003a0001c0013others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(35): Show | a0001c0001t0001g0008 a0001c0001t0001g0020 a0001c0001t0001g0034 others(298): Show |
302 | 380 | 0.7947 | -1 | c.129 others(9): Show |
SLC1A3 | ENSG00000079215.15 | transcript | ENST00000265113.9 | protein_coding | 8/9 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SLC1A3_chr5_36601606_36693334 | 36689094 | TA | T | downstream_gene_variant | MODIFIER | HG01069.hp2 HG01070.hp1 HG01109.hp1 others(30): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(7): Show | a0001c0001t0001g0015 a0001c0001t0001g0128 a0001c0001t0001g0309 others(30): Show |
33 | 380 | 0.0868 | -1 | c.*28 others(6): Show |
SLC1A3 | ENSG00000079215.15 | transcript | ENST00000265113.9 | protein_coding | 761 | chr5 | TogoVar | |||||||
SLC1A3_chr5_36601606_36693334 | 36689556 | CT | C | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00597.hp2 HG00621.hp2 others(25): Show |
a0001a0002a0010 | a0001c0001a0001c0003a0002c0002others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0002 a0001c0001t0001g0033 a0001c0001t0001g0047 others(25): Show |
28 | 380 | 0.0737 | -1 | c.*32 others(6): Show |
SLC1A3 | ENSG00000079215.15 | transcript | ENST00000265113.9 | protein_coding | 1223 | chr5 | TogoVar | |||||||
SLC1A4_chr2_64984399_65028865 | 64987662 | CA | C | upstream_gene_variant | MODIFIER | HG00280.hp1 HG01175.hp1 HG01361.hp1 others(14): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0003a0002c0005others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0009others(6): Show | a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0251 others(14): Show |
17 | 394 | 0.0432 | -1 | c.-19 others(6): Show |
SLC1A4 | ENSG00000115902.11 | transcript | ENST00000234256.4 | protein_coding | 1736 | chr2 | TogoVar | |||||||
SLC1A4_chr2_64984399_65028865 | 64991421 | CT | C | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00423.hp2 others(103): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0004a0001c0006others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(25): Show | a0001c0001t0001g0004 a0001c0001t0001g0021 a0001c0001t0001g0022 others(95): Show |
106 | 394 | 0.2690 | -1 | c.527 others(9): Show |
SLC1A4 | ENSG00000115902.11 | transcript | ENST00000234256.4 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SLC1A4_chr2_64984399_65028865 | 64994699 | CA | C | intron_variant | MODIFIER | HG01167.hp1 HG01891.hp2 HG02258.hp1 others(10): Show |
a0001a0002 | a0001c0001a0002c0005a0002c0007 | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(3): Show | a0001c0001t0001g0298 a0001c0001t0001g0299 a0001c0001t0002g0025 others(9): Show |
13 | 394 | 0.0330 | -1 | c.527 others(9): Show |
SLC1A4 | ENSG00000115902.11 | transcript | ENST00000234256.4 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SLC1A4_chr2_64984399_65028865 | 64996113 | AT | A | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp2 HG00408.hp1 others(140): Show |
a0001a0002a0006others(4): Show | a0001c0001a0001c0004a0001c0028others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(22): Show | a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0110 others(131): Show |
143 | 394 | 0.3629 | -1 | c.528 others(9): Show |
SLC1A4 | ENSG00000115902.11 | transcript | ENST00000234256.4 | protein_coding | 1/7 | chr2 | TogoVar | |||||||
SLC1A4_chr2_64984399_65028865 | 65002570 | CT | C | intron_variant | MODIFIER | HG00099.hp1 HG00323.hp2 HG01167.hp1 others(17): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0002c0005others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(6): Show | a0001c0001t0001g0257 a0001c0001t0001g0258 a0001c0001t0001g0298 others(16): Show |
20 | 394 | 0.0508 | -1 | c.570 others(9): Show |
SLC1A4 | ENSG00000115902.11 | transcript | ENST00000234256.4 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SLC1A4_chr2_64984399_65028865 | 65003929 | GT | G | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00323.hp1 others(60): Show |
a0001a0002a0004others(2): Show | a0001c0001a0002c0003a0002c0005others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(8): Show | a0001c0001t0001g0004 a0001c0001t0001g0021 a0001c0001t0001g0022 others(54): Show |
63 | 394 | 0.1599 | -1 | c.571 others(7): Show |
SLC1A4 | ENSG00000115902.11 | transcript | ENST00000234256.4 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SLC1A4_chr2_64984399_65028865 | 65009934 | AT | A | intron_variant | MODIFIER | HG01243.hp2 HG02109.hp2 HG02145.hp2 others(18): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0004others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(5): Show | a0001c0001t0001g0198 a0001c0001t0001g0290 a0001c0001t0001g0298 others(17): Show |
21 | 394 | 0.0533 | -1 | c.634 others(8): Show |
SLC1A4 | ENSG00000115902.11 | transcript | ENST00000234256.4 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SLC1A4_chr2_64984399_65028865 | 65011433 | AT | A | intron_variant | MODIFIER | HG01884.hp1 HG02896.hp2 HG02897.hp1 others(3): Show |
a0001a0002 | a0001c0001a0001c0004a0002c0003 | a0001c0001t0010a0001c0004t0015a0001c0004t0020others(2): Show | a0001c0001t0010g0342 a0001c0004t0015g0026 a0001c0004t0020g0284 others(2): Show |
6 | 394 | 0.0152 | -1 | c.800 others(8): Show |
SLC1A4 | ENSG00000115902.11 | transcript | ENST00000234256.4 | protein_coding | 4/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SLC1A4_chr2_64984399_65028865 | 65015443 | AC | A | intron_variant | MODIFIER | HG00738.hp2 HG01346.hp2 HG01361.hp2 others(6): Show |
a0001a0002 | a0001c0021a0002c0003a0002c0005others(3): Show | a0001c0021t0005a0002c0003t0008a0002c0005t0008others(4): Show | a0001c0021t0005g0346 a0002c0003t0008g0205 a0002c0005t0008g0190 others(6): Show |
9 | 394 | 0.0228 | -1 | c.801 others(8): Show |
SLC1A4 | ENSG00000115902.11 | transcript | ENST00000234256.4 | protein_coding | 4/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SLC1A4_chr2_64984399_65028865 | 65017345 | CT | C | intron_variant | MODIFIER | HG00738.hp2 HG01081.hp2 HG01099.hp1 others(21): Show |
a0001a0002 | a0001c0021a0002c0003a0002c0005others(4): Show | a0001c0021t0005a0002c0003t0008a0002c0005t0006others(8): Show | a0001c0021t0005g0346 a0002c0003t0008g0205 a0002c0005t0006g0035 others(20): Show |
24 | 394 | 0.0609 | -1 | c.103 others(9): Show |
SLC1A4 | ENSG00000115902.11 | transcript | ENST00000234256.4 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SLC1A4_chr2_64984399_65028865 | 65017347 | TA | T | intron_variant | MODIFIER | HG02055.hp1 HG02257.hp1 HG02451.hp2 others(5): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0006others(1): Show | a0001c0001t0002a0001c0002t0003a0001c0002t0014others(2): Show | a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0002t0003g0066 others(5): Show |
8 | 394 | 0.0203 | -1 | c.103 others(9): Show |
SLC1A4 | ENSG00000115902.11 | transcript | ENST00000234256.4 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SLC1A4_chr2_64984399_65028865 | 65025508 | CA | C | downstream_gene_variant | MODIFIER | HG00323.hp1 HG01169.hp1 HG01884.hp2 others(25): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0004others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0009others(9): Show | a0001c0001t0001g0131 a0001c0001t0001g0271 a0001c0001t0002g0267 others(25): Show |
28 | 394 | 0.0711 | -1 | c.*43 others(6): Show |
SLC1A4 | ENSG00000115902.11 | transcript | ENST00000234256.4 | protein_coding | 1644 | chr2 | TogoVar | |||||||
SLC1A5_chr19_46769883_46793594 | 46770184 | TA | T | downstream_gene_variant | MODIFIER | HG00280.hp1 HG00323.hp1 HG00323.hp2 others(89): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0005others(5): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(17): Show | a0001c0001t0001g0143 a0001c0001t0003g0002 a0001c0001t0003g0008 others(46): Show |
92 | 428 | 0.2150 | -1 | c.*53 others(6): Show |
SLC1A5 | ENSG00000105281.12 | transcript | ENST00000542575.6 | protein_coding | 4698 | chr19 | TogoVar | |||||||
SLC1A5_chr19_46769883_46793594 | 46770188 | TA | T | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(176): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0002a0001c0008others(11): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(33): Show | a0001c0001t0001g0028 a0001c0001t0001g0086 a0001c0001t0001g0088 others(88): Show |
179 | 428 | 0.4182 | -1 | c.*53 others(6): Show |
SLC1A5 | ENSG00000105281.12 | transcript | ENST00000542575.6 | protein_coding | 4694 | chr19 | TogoVar | |||||||
SLC1A5_chr19_46769883_46793594 | 46773474 | TA | T | downstream_gene_variant | MODIFIER | HG00621.hp2 HG02630.hp2 NA18941.hp1 others(2): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0003a0002c0003t0002 | a0001c0001t0003g0002 a0001c0001t0003g0008 a0001c0001t0003g0065 others(1): Show |
5 | 428 | 0.0117 | -1 | c.*20 others(6): Show |
SLC1A5 | ENSG00000105281.12 | transcript | ENST00000542575.6 | protein_coding | 1408 | chr19 | TogoVar | |||||||
SLC1A5_chr19_46769883_46793594 | 46773475 | AT | A | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(132): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0002a0001c0013others(10): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(24): Show | a0001c0001t0001g0143 a0001c0001t0003g0002 a0001c0001t0003g0008 others(61): Show |
135 | 428 | 0.3154 | -1 | c.*20 others(6): Show |
SLC1A5 | ENSG00000105281.12 | transcript | ENST00000542575.6 | protein_coding | 1407 | chr19 | TogoVar | |||||||
SLC1A5_chr19_46769883_46793594 | 46775914 | AT | A | intron_variant | MODIFIER | HG01884.hp1 HG02258.hp2 HG03579.hp1 others(1): Show |
a0003a0004 | a0003c0012a0004c0011 | a0003c0012t0014a0004c0011t0016a0004c0011t0020 | a0003c0012t0014g0025 a0004c0011t0016g0076 a0004c0011t0020g0075 |
4 | 428 | 0.0094 | -1 | c.138 others(9): Show |
SLC1A5 | ENSG00000105281.12 | transcript | ENST00000542575.6 | protein_coding | 7/7 | chr19 | TogoVar | |||||||
SLC1A5_chr19_46769883_46793594 | 46775917 | TA | T | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00280.hp2 others(18): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0002c0003others(3): Show | a0001c0001t0003a0001c0002t0001a0002c0003t0002others(3): Show | a0001c0001t0003g0065 a0001c0002t0001g0131 a0002c0003t0002g0049 others(7): Show |
21 | 428 | 0.0491 | -1 | c.138 others(9): Show |
SLC1A5 | ENSG00000105281.12 | transcript | ENST00000542575.6 | protein_coding | 7/7 | chr19 | TogoVar | |||||||
SLC1A5_chr19_46769883_46793594 | 46776197 | AT | A | intron_variant | MODIFIER | HG00738.hp1 HG01256.hp2 HG02683.hp2 others(4): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0001a0001c0001t0004a0001c0001t0006others(2): Show | a0001c0001t0001g0086 a0001c0001t0004g0095 a0001c0001t0006g0096 others(4): Show |
7 | 428 | 0.0164 | -1 | c.138 others(9): Show |
SLC1A5 | ENSG00000105281.12 | transcript | ENST00000542575.6 | protein_coding | 7/7 | chr19 | TogoVar | |||||||
SLC1A5_chr19_46769883_46793594 | 46777020 | AG | A | frameshift_variant | HIGH | NA18993.hp1 | a0014 | a0014c0021 | a0014c0021t0001 | a0014c0021t0001g0132 | 1 | 428 | 0.0023 | -1 | c.134 others(5): Show |
p.Leu others(5): Show |
SLC1A5 | ENSG00000105281.12 | transcript | ENST00000542575.6 | protein_coding | 7/8 | 1971/2882 | 1342/1626 | 448/541 | chr19 | TogoVar | |||
SLC1A5_chr19_46769883_46793594 | 46777311 | CG | C | frameshift_variant | HIGH | NA18993.hp1 | a0014 | a0014c0021 | a0014c0021t0001 | a0014c0021t0001g0132 | 1 | 428 | 0.0023 | -1 | c.115 others(5): Show |
p.Val others(5): Show |
SLC1A5 | ENSG00000105281.12 | transcript | ENST00000542575.6 | protein_coding | 6/8 | 1781/2882 | 1152/1626 | 384/541 | chr19 | TogoVar | |||
SLC1A5_chr19_46769883_46793594 | 46777318 | GC | G | frameshift_variant | HIGH | NA18940.hp1 | a0006 | a0006c0016 | a0006c0016t0006 | a0006c0016t0006g0110 | 1 | 428 | 0.0023 | -1 | c.114 others(5): Show |
p.Gly others(5): Show |
SLC1A5 | ENSG00000105281.12 | transcript | ENST00000542575.6 | protein_coding | 6/8 | 1774/2882 | 1145/1626 | 382/541 | chr19 | TogoVar | |||
SLC1A5_chr19_46769883_46793594 | 46779424 | CA | C | intron_variant | MODIFIER | HG00673.hp2 HG01069.hp1 HG01069.hp2 others(11): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0005others(4): Show | a0001c0001t0003a0001c0002t0001a0001c0002t0006others(8): Show | a0001c0001t0003g0064 a0001c0002t0001g0118 a0001c0002t0001g0123 others(10): Show |
14 | 428 | 0.0327 | -1 | c.825 others(8): Show |
SLC1A5 | ENSG00000105281.12 | transcript | ENST00000542575.6 | protein_coding | 4/7 | chr19 | TogoVar | |||||||
SLC1A5_chr19_46769883_46793594 | 46779857 | CT | C | intron_variant | MODIFIER | HG00140.hp2 HG00673.hp2 HG00733.hp1 others(30): Show |
a0001a0002a0003 | a0001c0001a0001c0005a0002c0003others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(9): Show | a0001c0001t0001g0028 a0001c0001t0001g0086 a0001c0001t0001g0088 others(21): Show |
33 | 428 | 0.0771 | -1 | c.825 others(8): Show |
SLC1A5 | ENSG00000105281.12 | transcript | ENST00000542575.6 | protein_coding | 4/7 | chr19 | TogoVar | |||||||
SLC1A5_chr19_46769883_46793594 | 46782682 | CA | C | intron_variant | MODIFIER | HG01261.hp2 HG02615.hp2 HG03098.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0006 | a0001c0001t0004g0042 a0001c0001t0004g0144 a0001c0001t0006g0105 others(1): Show |
5 | 428 | 0.0117 | -1 | c.658 others(8): Show |
SLC1A5 | ENSG00000105281.12 | transcript | ENST00000542575.6 | protein_coding | 3/7 | chr19 | TogoVar | |||||||
SLC1A5_chr19_46769883_46793594 | 46783466 | CA | C | intron_variant | MODIFIER | HG01168.hp2 HG01256.hp2 HG01993.hp2 others(9): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0005others(3): Show | a0001c0001t0023a0001c0002t0001a0001c0002t0024others(4): Show | a0001c0001t0023g0087 a0001c0002t0001g0033 a0001c0002t0001g0118 others(8): Show |
12 | 428 | 0.0280 | -1 | c.657 others(8): Show |
SLC1A5 | ENSG00000105281.12 | transcript | ENST00000542575.6 | protein_coding | 3/7 | chr19 | TogoVar |