view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SLC1A5_chr19_46769883_46793594 | 46786053 | CA | C | intron_variant | MODIFIER | HG01169.hp1 HG01243.hp1 HG02622.hp2 others(6): Show |
a0001a0003a0007 | a0001c0001a0001c0002a0001c0005others(2): Show | a0001c0001t0006a0001c0001t0011a0001c0002t0001others(3): Show | a0001c0001t0006g0105 a0001c0001t0006g0106 a0001c0001t0011g0056 others(6): Show |
9 | 428 | 0.0210 | -1 | c.566 others(9): Show |
SLC1A5 | ENSG00000105281.12 | transcript | ENST00000542575.6 | protein_coding | 1/7 | chr19 | TogoVar | |||||||
SLC1A5_chr19_46769883_46793594 | 46787561 | GA | G | frameshift_variant | HIGH | NA18956.hp2 | a0010 | a0010c0022 | a0010c0022t0002 | a0010c0022t0002g0171 | 1 | 428 | 0.0023 | -1 | c.404 others(4): Show |
p.Phe others(5): Show |
SLC1A5 | ENSG00000105281.12 | transcript | ENST00000542575.6 | protein_coding | 1/8 | 1033/2882 | 404/1626 | 135/541 | chr19 | TogoVar | |||
SLC1A5_chr19_46769883_46793594 | 46787614 | TG | T | frameshift_variant | HIGH | NA19006.hp2 | a0015 | a0015c0026 | a0015c0026t0002 | a0015c0026t0002g0200 | 1 | 428 | 0.0023 | -1 | c.351 others(4): Show |
p.Ser others(5): Show |
SLC1A5 | ENSG00000105281.12 | transcript | ENST00000542575.6 | protein_coding | 1/8 | 980/2882 | 351/1626 | 117/541 | chr19 | TogoVar | |||
SLC1A5_chr19_46769883_46793594 | 46787699 | GA | G | frameshift_variant | HIGH | NA18974.hp1 NA19059.hp1 |
a0007 | a0007c0009 | a0007c0009t0001 | a0007c0009t0001g0083 a0007c0009t0001g0084 |
2 | 428 | 0.0047 | -1 | c.266 others(4): Show |
p.Phe others(4): Show |
SLC1A5 | ENSG00000105281.12 | transcript | ENST00000542575.6 | protein_coding | 1/8 | 895/2882 | 266/1626 | 89/541 | chr19 | TogoVar | |||
SLC1A5_chr19_46769883_46793594 | 46790881 | CA | C | upstream_gene_variant | MODIFIER | HG00733.hp2 HG01255.hp2 HG01256.hp1 others(12): Show |
a0001a0003a0005 | a0001c0001a0001c0002a0001c0005others(2): Show | a0001c0001t0003a0001c0001t0005a0001c0001t0016others(7): Show | a0001c0001t0003g0002 a0001c0001t0005g0004 a0001c0001t0016g0081 others(9): Show |
15 | 428 | 0.0351 | -1 | c.-29 others(6): Show |
SLC1A5 | ENSG00000105281.12 | transcript | ENST00000542575.6 | protein_coding | 2288 | chr19 | TogoVar | |||||||
SLC1A5_chr19_46769883_46793594 | 46793102 | TA | T | upstream_gene_variant | MODIFIER | HG00408.hp1 HG00423.hp1 HG00423.hp2 others(136): Show |
a0001a0002a0003others(6): Show | a0001c0001a0002c0003a0002c0006others(7): Show | a0001c0001t0003a0001c0001t0005a0001c0001t0015others(16): Show | a0001c0001t0003g0002 a0001c0001t0003g0008 a0001c0001t0003g0014 others(61): Show |
139 | 428 | 0.3248 | -1 | c.-51 others(6): Show |
SLC1A5 | ENSG00000105281.12 | transcript | ENST00000542575.6 | protein_coding | 4509 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14945436 | AT | A | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00323.hp1 HG00423.hp1 others(101): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0003a0001c0011others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(10): Show | a0001c0001t0001g0010 a0001c0001t0001g0035 a0001c0001t0001g0153 others(79): Show |
104 | 408 | 0.2549 | -1 | c.*47 others(6): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 4596 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14946047 | GT | G | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00280.hp2 others(301): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(28): Show | a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0037 others(225): Show |
304 | 408 | 0.7451 | -1 | c.*41 others(6): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 3985 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14947499 | CT | C | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00323.hp1 HG00423.hp1 others(123): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0003a0001c0001t0005a0001c0001t0009others(12): Show | a0001c0001t0003g0013 a0001c0001t0003g0023 a0001c0001t0003g0063 others(95): Show |
126 | 408 | 0.3088 | -1 | c.*26 others(6): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 2533 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14948262 | AG | A | downstream_gene_variant | MODIFIER | HG01884.hp2 HG02572.hp2 HG03130.hp2 |
a0001a0004 | a0001c0002a0001c0004a0004c0013 | a0001c0002t0008a0001c0004t0002a0004c0013t0003 | a0001c0002t0008g0113 a0001c0004t0002g0241 a0004c0013t0003g0104 |
3 | 408 | 0.0074 | -1 | c.*19 others(6): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 1770 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14948263 | GA | G | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(387): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(26): Show | a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0010 others(295): Show |
390 | 408 | 0.9559 | -1 | c.*19 others(6): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 1769 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14948913 | AT | A | downstream_gene_variant | MODIFIER | HG00733.hp2 HG01109.hp2 HG01255.hp2 others(18): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0003t0003 | a0001c0001t0001g0010 a0001c0001t0001g0015 a0001c0001t0001g0037 others(12): Show |
21 | 408 | 0.0515 | -1 | c.*12 others(6): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 1119 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14949321 | TA | T | downstream_gene_variant | MODIFIER | HG00280.hp1 HG00741.hp2 HG01081.hp2 others(56): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0004a0001c0002t0002others(2): Show | a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0040 others(45): Show |
59 | 408 | 0.1446 | -1 | c.*87 others(5): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 711 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14950171 | TG | T | 3_prime_UTR_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00544.hp2 others(107): Show |
a0001a0003a0005 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0009a0001c0002t0002a0001c0002t0006others(10): Show | a0001c0001t0009g0141 a0001c0002t0002g0002 a0001c0002t0002g0012 others(81): Show |
110 | 408 | 0.2696 | -1 | c.*23 others(4): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 10/10 | 23 | chr19 | TogoVar | ||||||
SLC1A6_chr19_14945033_14984864 | 14950946 | CA | C | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00280.hp2 others(198): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(21): Show | a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0040 others(157): Show |
201 | 408 | 0.4927 | -1 | c.150 others(9): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 9/9 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14951987 | AT | A | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00323.hp1 others(233): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(21): Show | a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0040 others(178): Show |
236 | 408 | 0.5784 | -1 | c.149 others(9): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 9/9 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14952273 | CA | C | intron_variant | MODIFIER | HG00280.hp2 HG00735.hp1 HG01175.hp1 others(16): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0002a0001c0002t0004others(3): Show | a0001c0001t0001g0193 a0001c0001t0001g0255 a0001c0002t0002g0284 others(12): Show |
19 | 408 | 0.0466 | -1 | c.149 others(9): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 9/9 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14955634 | AG | A | intron_variant | MODIFIER | HG00621.hp1 HG00673.hp1 HG01081.hp1 others(49): Show |
a0001 | a0001c0002a0001c0004a0001c0008 | a0001c0002t0001a0001c0002t0003a0001c0002t0004others(4): Show | a0001c0002t0001g0162 a0001c0002t0001g0163 a0001c0002t0003g0085 others(33): Show |
52 | 408 | 0.1275 | -1 | c.116 others(9): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 7/9 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14955943 | GA | G | intron_variant | MODIFIER | NA18953.hp1 NA18957.hp2 NA18959.hp1 others(2): Show |
a0001 | a0001c0002 | a0001c0002t0004 | a0001c0002t0004g0008 a0001c0002t0004g0112 |
5 | 408 | 0.0123 | -1 | c.116 others(9): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 7/9 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14956897 | CA | C | intron_variant | MODIFIER | HG00423.hp1 HG00423.hp2 NA18943.hp2 |
a0001 | a0001c0001a0001c0003 | a0001c0001t0003a0001c0003t0003 | a0001c0001t0003g0063 a0001c0001t0003g0064 a0001c0003t0003g0093 |
3 | 408 | 0.0074 | -1 | c.936 others(8): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 6/9 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14958410 | CA | C | intron_variant | MODIFIER | HG00280.hp1 HG00741.hp2 HG01081.hp2 others(63): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0005others(5): Show | a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0040 others(52): Show |
66 | 408 | 0.1618 | -1 | c.936 others(9): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 6/9 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14963831 | CT | C | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00280.hp2 others(296): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(26): Show | a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0040 others(221): Show |
299 | 408 | 0.7328 | -1 | c.591 others(8): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 5/9 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14965023 | CT | C | intron_variant | MODIFIER | HG00280.hp2 HG00735.hp1 HG00738.hp1 others(19): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0005a0001c0002t0004others(4): Show | a0001c0001t0001g0173 a0001c0001t0005g0139 a0001c0002t0004g0121 others(14): Show |
22 | 408 | 0.0539 | -1 | c.549 others(8): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 4/9 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14965849 | CA | C | intron_variant | MODIFIER | HG00280.hp1 HG00323.hp1 HG00423.hp1 others(219): Show |
a0001a0002a0004others(1): Show | a0001c0001a0001c0002a0001c0003others(6): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(19): Show | a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0040 others(167): Show |
222 | 408 | 0.5441 | -1 | c.549 others(9): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 4/9 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14967021 | GT | G | intron_variant | MODIFIER | HG02809.hp1 HG03453.hp2 HG03579.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0222 a0001c0001t0001g0247 a0001c0001t0001g0248 |
3 | 408 | 0.0074 | -1 | c.548 others(9): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 4/9 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14968114 | TG | T | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00642.hp1 others(98): Show |
a0001a0003a0005 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0009others(9): Show | a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0040 others(83): Show |
101 | 408 | 0.2476 | -1 | c.548 others(8): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 4/9 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14968331 | TG | T | frameshift_variant | HIGH | NA19087.hp1 | a0005 | a0005c0009 | a0005c0009t0002 | a0005c0009t0002g0313 | 1 | 408 | 0.0025 | -1 | c.519 others(4): Show |
p.Thr others(5): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 4/10 | 1082/2420 | 519/1695 | 173/564 | chr19 | TogoVar | |||
SLC1A6_chr19_14945033_14984864 | 14968851 | AT | A | intron_variant | MODIFIER | HG00280.hp1 HG00741.hp2 HG01081.hp2 others(54): Show |
a0001 | a0001c0001a0001c0010 | a0001c0001t0001a0001c0001t0004a0001c0010t0001 | a0001c0001t0001g0003 a0001c0001t0001g0016 a0001c0001t0001g0040 others(43): Show |
57 | 408 | 0.1397 | -1 | c.344 others(8): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 3/9 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14969954 | CT | C | intron_variant | MODIFIER | HG00099.hp2 HG00544.hp2 HG00558.hp2 others(50): Show |
a0001 | a0001c0002a0001c0003 | a0001c0002t0002a0001c0002t0013a0001c0003t0001 | a0001c0002t0002g0002 a0001c0002t0002g0012 a0001c0002t0002g0017 others(32): Show |
53 | 408 | 0.1299 | -1 | c.344 others(9): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 3/9 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14969982 | CT | C | intron_variant | MODIFIER | HG00621.hp1 HG00673.hp1 HG01081.hp1 others(50): Show |
a0001 | a0001c0002a0001c0004a0001c0008 | a0001c0002t0001a0001c0002t0003a0001c0002t0004others(5): Show | a0001c0002t0001g0162 a0001c0002t0001g0163 a0001c0002t0003g0085 others(34): Show |
53 | 408 | 0.1299 | -1 | c.344 others(9): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 3/9 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14970710 | CA | C | intron_variant | MODIFIER | HG00621.hp1 HG00673.hp1 HG01081.hp1 others(51): Show |
a0001 | a0001c0002a0001c0003a0001c0004others(1): Show | a0001c0002t0001a0001c0002t0003a0001c0002t0004others(6): Show | a0001c0002t0001g0162 a0001c0002t0001g0163 a0001c0002t0003g0085 others(34): Show |
54 | 408 | 0.1324 | -1 | c.343 others(9): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 3/9 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14975767 | GA | G | intron_variant | MODIFIER | HG00280.hp2 HG00735.hp1 HG00735.hp2 others(19): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0002t0006a0001c0002t0007others(1): Show | a0001c0001t0001g0197 a0001c0001t0001g0206 a0001c0001t0001g0207 others(15): Show |
22 | 408 | 0.0539 | -1 | c.-7- others(8): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 1/9 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14975883 | AG | A | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp2 HG00323.hp1 others(197): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0003a0001c0001t0004a0001c0002t0002others(16): Show | a0001c0001t0003g0013 a0001c0001t0003g0023 a0001c0001t0003g0063 others(136): Show |
200 | 408 | 0.4902 | -1 | c.-7- others(8): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 1/9 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14977037 | GA | G | intron_variant | MODIFIER | HG00735.hp2 HG01884.hp1 HG01978.hp2 others(15): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0010 a0001c0001t0001g0015 a0001c0001t0001g0037 others(9): Show |
18 | 408 | 0.0441 | -1 | c.-8+ others(8): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 1/9 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14979244 | CG | C | intron_variant | MODIFIER | HG00621.hp1 HG00673.hp1 HG01081.hp1 others(47): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0004a0001c0002t0004a0001c0002t0008others(3): Show | a0001c0001t0004g0133 a0001c0002t0004g0004 a0001c0002t0004g0008 others(30): Show |
50 | 408 | 0.1226 | -1 | c.-8+ others(6): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 1/9 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14980654 | CA | C | upstream_gene_variant | MODIFIER | HG00323.hp1 HG00423.hp1 HG00423.hp2 others(81): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0002t0003others(5): Show | a0001c0001t0001g0034 a0001c0001t0001g0038 a0001c0001t0001g0200 others(60): Show |
84 | 408 | 0.2059 | -1 | c.-13 others(6): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 791 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14981131 | TA | T | upstream_gene_variant | MODIFIER | HG00323.hp1 HG00423.hp1 HG00423.hp2 others(75): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0003a0001c0002t0003a0001c0003t0003others(4): Show | a0001c0001t0003g0013 a0001c0001t0003g0023 a0001c0001t0003g0063 others(53): Show |
78 | 408 | 0.1912 | -1 | c.-18 others(6): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 1268 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14982058 | TA | T | upstream_gene_variant | MODIFIER | HG00280.hp2 HG00621.hp1 HG00673.hp1 others(67): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0001t0004a0001c0002t0003others(8): Show | a0001c0001t0001g0155 a0001c0001t0004g0133 a0001c0002t0003g0085 others(45): Show |
70 | 408 | 0.1716 | -1 | c.-27 others(6): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 2195 | chr19 | TogoVar | |||||||
SLC1A6_chr19_14945033_14984864 | 14983719 | CA | C | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00558.hp2 HG00639.hp2 others(11): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0002t0002a0001c0002t0004others(4): Show | a0001c0001t0001g0155 a0001c0001t0001g0159 a0001c0001t0001g0160 others(11): Show |
14 | 408 | 0.0343 | -1 | c.-44 others(6): Show |
SLC1A6 | ENSG00000105143.13 | transcript | ENST00000594383.2 | protein_coding | 3856 | chr19 | TogoVar | |||||||
SLC1A7_chr1_53082183_53147638 | 53090790 | TG | T | frameshift_variant | HIGH | NA18972.hp2 | a0009 | a0009c0028 | a0009c0028t0001 | a0009c0028t0001g0087 | 1 | 400 | 0.0025 | -1 | c.104 others(5): Show |
p.Ile others(5): Show |
SLC1A7 | ENSG00000162383.13 | transcript | ENST00000371494.9 | protein_coding | 8/11 | 1236/2698 | 1047/1683 | 349/560 | chr1 | TogoVar | |||
SLC1A7_chr1_53082183_53147638 | 53103532 | TG | T | frameshift_variant | HIGH | NA18997.hp1 | a0012 | a0012c0019 | a0012c0019t0001 | a0012c0019t0001g0261 | 1 | 400 | 0.0025 | -1 | c.510 others(4): Show |
p.Lys others(5): Show |
SLC1A7 | ENSG00000162383.13 | transcript | ENST00000371494.9 | protein_coding | 5/11 | 699/2698 | 510/1683 | 170/560 | chr1 | TogoVar | |||
SLC1A7_chr1_53082183_53147638 | 53103548 | TG | T | frameshift_variant | HIGH | NA18974.hp1 | a0010 | a0010c0026 | a0010c0026t0002 | a0010c0026t0002g0196 | 1 | 400 | 0.0025 | -1 | c.494 others(4): Show |
p.Pro others(5): Show |
SLC1A7 | ENSG00000162383.13 | transcript | ENST00000371494.9 | protein_coding | 5/11 | 683/2698 | 494/1683 | 165/560 | chr1 | TogoVar | |||
SLC1A7_chr1_53082183_53147638 | 53106599 | CA | C | intron_variant | MODIFIER | HG00639.hp2 HG00735.hp2 HG01175.hp2 others(21): Show |
a0001a0002 | a0001c0002a0001c0003a0001c0009others(6): Show | a0001c0002t0002a0001c0003t0003a0001c0009t0007others(6): Show | a0001c0002t0002g0032 a0001c0002t0002g0060 a0001c0002t0002g0169 others(20): Show |
24 | 400 | 0.0600 | -1 | c.432 others(8): Show |
SLC1A7 | ENSG00000162383.13 | transcript | ENST00000371494.9 | protein_coding | 3/10 | chr1 | TogoVar | |||||||
SLC1A7_chr1_53082183_53147638 | 53107153 | TA | T | intron_variant | MODIFIER | HG00639.hp1 HG01069.hp1 HG01169.hp1 others(9): Show |
a0001a0002a0009 | a0001c0003a0002c0001a0002c0004others(2): Show | a0001c0003t0003a0002c0001t0001a0002c0004t0001others(2): Show | a0001c0003t0003g0123 a0002c0001t0001g0073 a0002c0001t0001g0077 others(9): Show |
12 | 400 | 0.0300 | -1 | c.432 others(9): Show |
SLC1A7 | ENSG00000162383.13 | transcript | ENST00000371494.9 | protein_coding | 3/10 | chr1 | TogoVar | |||||||
SLC1A7_chr1_53082183_53147638 | 53107968 | AT | A | intron_variant | MODIFIER | HG00140.hp1 HG00408.hp1 HG00597.hp1 others(68): Show |
a0001a0002a0004 | a0001c0003a0001c0005a0002c0004others(1): Show | a0001c0003t0003a0001c0003t0019a0001c0003t0023others(3): Show | a0001c0003t0003g0014 a0001c0003t0003g0042 a0001c0003t0003g0047 others(66): Show |
71 | 400 | 0.1775 | -1 | c.432 others(9): Show |
SLC1A7 | ENSG00000162383.13 | transcript | ENST00000371494.9 | protein_coding | 3/10 | chr1 | TogoVar | |||||||
SLC1A7_chr1_53082183_53147638 | 53134964 | AT | A | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(395): Show |
a0001a0002a0003others(9): Show | a0001c0002a0001c0003a0001c0005others(30): Show | a0001c0002t0002a0001c0002t0003a0001c0002t0005others(53): Show | a0001c0002t0002g0003 a0001c0002t0002g0011 a0001c0002t0002g0012 others(364): Show |
398 | 400 | 0.9950 | -1 | c.136 others(8): Show |
SLC1A7 | ENSG00000162383.13 | transcript | ENST00000371494.9 | protein_coding | 1/10 | chr1 | TogoVar | |||||||
SLC1A7_chr1_53082183_53147638 | 53136629 | TA | T | intron_variant | MODIFIER | HG00642.hp2 HG01123.hp1 HG01123.hp2 others(19): Show |
a0001a0002a0003 | a0001c0002a0001c0003a0001c0007others(5): Show | a0001c0002t0002a0001c0002t0005a0001c0002t0012others(9): Show | a0001c0002t0002g0321 a0001c0002t0002g0326 a0001c0002t0002g0334 others(18): Show |
22 | 400 | 0.0550 | -1 | c.136 others(9): Show |
SLC1A7 | ENSG00000162383.13 | transcript | ENST00000371494.9 | protein_coding | 1/10 | chr1 | TogoVar | |||||||
SLC1A7_chr1_53082183_53147638 | 53136634 | TA | T | intron_variant | MODIFIER | HG01884.hp1 HG01891.hp2 HG06807.hp1 others(1): Show |
a0001a0002 | a0001c0002a0001c0014a0002c0001 | a0001c0002t0002a0001c0014t0009a0002c0001t0001others(1): Show | a0001c0002t0002g0321 a0001c0014t0009g0322 a0002c0001t0001g0337 others(1): Show |
4 | 400 | 0.0100 | -1 | c.136 others(9): Show |
SLC1A7 | ENSG00000162383.13 | transcript | ENST00000371494.9 | protein_coding | 1/10 | chr1 | TogoVar | |||||||
SLC1A7_chr1_53082183_53147638 | 53136651 | AT | A | intron_variant | MODIFIER | HG00642.hp2 HG01123.hp1 HG01123.hp2 others(19): Show |
a0001a0002a0003 | a0001c0002a0001c0003a0001c0007others(5): Show | a0001c0002t0002a0001c0002t0005a0001c0002t0012others(9): Show | a0001c0002t0002g0321 a0001c0002t0002g0326 a0001c0002t0002g0334 others(18): Show |
22 | 400 | 0.0550 | -1 | c.136 others(9): Show |
SLC1A7 | ENSG00000162383.13 | transcript | ENST00000371494.9 | protein_coding | 1/10 | chr1 | TogoVar | |||||||
SLC1A7_chr1_53082183_53147638 | 53136663 | TA | T | intron_variant | MODIFIER | HG01884.hp1 HG01891.hp2 HG06807.hp1 others(1): Show |
a0001a0002 | a0001c0002a0001c0014a0002c0001 | a0001c0002t0002a0001c0014t0009a0002c0001t0001others(1): Show | a0001c0002t0002g0321 a0001c0014t0009g0322 a0002c0001t0001g0337 others(1): Show |
4 | 400 | 0.0100 | -1 | c.136 others(9): Show |
SLC1A7 | ENSG00000162383.13 | transcript | ENST00000371494.9 | protein_coding | 1/10 | chr1 | TogoVar |