Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
PGAP1_chr2_196828004_196931707	196828228	TCTCACAC others(3): Show TCTCACACACA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG04204.hp2 HG04204.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0121 a0001c0001t0003g0121	1	188	0.0053	-10	c.12 others(23): Show c.12996_*13005delTGTGTGTGAG		PGAP1	ENSG00000197121.15	transcript	ENST00000354764.9	protein_coding					4775		chr2	TogoVar
PGAP1_chr2_196828004_196931707	196828230	TCACACAC others(3): Show TCACACACACA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02055.hp2 HG02145.hp2 HG02970.hp1 others(3): Show HG02055.hp2 HG02145.hp2 HG02970.hp1 HG03130.hp1 HG03139.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0006 a0001c0001t0005g0120 a0001c0001t0005g0128 others(2): Show a0001c0001t0005g0006 a0001c0001t0005g0120 a0001c0001t0005g0128 a0001c0001t0005g0129 a0001c0001t0005g0130	6	188	0.0319	-10	c.12 others(23): Show c.12994_*13003delTGTGTGTGTG		PGAP1	ENSG00000197121.15	transcript	ENST00000354764.9	protein_coding					4773		chr2	TogoVar
PGAP1_chr2_196828004_196931707	196911606	TAAAAAAA others(3): Show TAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG03225.hp2 HG03453.hp1 HG02922.hp2 HG03225.hp2 HG03453.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0007 a0001c0003t0007	a0001c0003t0007g0176 a0001c0003t0007g0177 a0001c0003t0007g0178 a0001c0003t0007g0176 a0001c0003t0007g0177 a0001c0003t0007g0178	3	188	0.0160	-10	c.649 others(27): Show c.649+1266_649+1275delTTTTTTTTTT		PGAP1	ENSG00000197121.15	transcript	ENST00000354764.9	protein_coding	4/26						chr2	TogoVar
PGAP1_chr2_196828004_196931707	196914619	CAAACAAA others(3): Show CAAACAAAACA	C C	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00642.hp1 HG00642.hp2 others(125): Show HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00733.hp1 HG00733.hp2 HG00741.hp2 HG01069.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01109.hp1 HG01109.hp2 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01261.hp1 HG01261.hp2 HG01358.hp2 HG01496.hp1 HG01496.hp2 HG01515.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG02109.hp1 HG02135.hp2 HG02258.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp2 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02622.hp2 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02698.hp2 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02818.hp1 HG02895.hp1 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG02965.hp2 HG02970.hp2 HG02976.hp1 HG02976.hp2 HG03041.hp2 HG03130.hp2 HG03139.hp2 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp1 HG03471.hp2 HG03491.hp1 HG03492.hp2 HG03540.hp1 HG03579.hp1 HG03579.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp2 HG03834.hp1 HG03834.hp2 HG03942.hp1 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04228.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18906.hp2 NA18939.hp1 NA18939.hp2 NA18946.hp1 NA18946.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18979.hp1 NA18979.hp2 NA18981.hp1 NA18981.hp2 NA18982.hp1 NA18982.hp2 NA18984.hp2 NA18992.hp1 NA18992.hp2 NA18995.hp1 NA18995.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19003.hp2 NA19043.hp1 NA19057.hp1 NA19057.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19079.hp2 NA19081.hp1 NA19081.hp2 NA19086.hp1 NA19086.hp2 NA20752.hp2 NA20805.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0002 a0002c0004 others(1): Show a0001c0001 a0001c0002 a0002c0004 a0003c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(25): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0015 a0001c0001t0018 a0001c0001t0021 a0001c0001t0023 a0001c0001t0024 a0001c0001t0025 a0001c0001t0030 a0001c0001t0031 a0001c0001t0032 a0001c0001t0034 a0001c0001t0036 a0001c0001t0037 a0001c0001t0038 a0001c0001t0039 a0001c0001t0040 a0001c0002t0004 a0001c0002t0033 a0002c0004t0004 a0003c0005t0002	a0001c0001t0001g0002 a0001c0001t0001g0016 a0001c0001t0001g0021 others(121): Show a0001c0001t0001g0002 a0001c0001t0001g0016 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0028 a0001c0001t0001g0030 a0001c0001t0001g0032 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0050 a0001c0001t0001g0057 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0080 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0002g0007 a0001c0001t0002g0131 a0001c0001t0002g0132 a0001c0001t0002g0133 a0001c0001t0002g0134 a0001c0001t0002g0135 a0001c0001t0002g0136 a0001c0001t0002g0137 a0001c0001t0002g0138 a0001c0001t0002g0139 a0001c0001t0002g0140 a0001c0001t0002g0141 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0146 a0001c0001t0002g0147 a0001c0001t0002g0148 a0001c0001t0002g0149 a0001c0001t0002g0150 a0001c0001t0002g0151 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0155 a0001c0001t0002g0156 a0001c0001t0002g0157 a0001c0001t0002g0158 a0001c0001t0002g0160 a0001c0001t0002g0161 a0001c0001t0002g0162 a0001c0001t0002g0164 a0001c0001t0002g0165 a0001c0001t0002g0166 a0001c0001t0002g0167 a0001c0001t0002g0168 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0004g0062 a0001c0001t0004g0086 a0001c0001t0006g0098 a0001c0001t0006g0099 a0001c0001t0006g0100 a0001c0001t0006g0101 a0001c0001t0006g0102 a0001c0001t0009g0003 a0001c0001t0009g0096 a0001c0001t0010g0064 a0001c0001t0010g0068 a0001c0001t0010g0079 a0001c0001t0011g0142 a0001c0001t0011g0169 a0001c0001t0012g0010 a0001c0001t0013g0004 a0001c0001t0015g0078 a0001c0001t0015g0085 a0001c0001t0018g0159 a0001c0001t0021g0036 a0001c0001t0023g0008 a0001c0001t0024g0104 a0001c0001t0025g0097 a0001c0001t0030g0067 a0001c0001t0031g0103 a0001c0001t0032g0063 a0001c0001t0034g0089 a0001c0001t0036g0077 a0001c0001t0037g0058 a0001c0001t0038g0025 a0001c0001t0039g0026 a0001c0001t0040g0181 a0001c0002t0004g0052 a0001c0002t0004g0053 a0001c0002t0004g0055 a0001c0002t0004g0056 a0001c0002t0033g0054 a0002c0004t0004g0031 a0002c0004t0004g0033 a0003c0005t0002g0145	128	188	0.6809	-10	c.478 others(27): Show c.478-1576_478-1567delTGTTTTGTTT		PGAP1	ENSG00000197121.15	transcript	ENST00000354764.9	protein_coding	3/26						chr2	TogoVar
PGAP1_chr2_196828004_196931707	196922577	GACACACA others(3): Show GACACACACAC	G G	intron_variant intron_variant	MODIFIER	HG02135.hp1 HG03486.hp2 NA18984.hp1 HG02135.hp1 HG03486.hp2 NA18984.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0019 a0001c0001t0020 a0001c0001t0008 a0001c0001t0019 a0001c0001t0020	a0001c0001t0008g0012 a0001c0001t0019g0015 a0001c0001t0020g0014 a0001c0001t0008g0012 a0001c0001t0019g0015 a0001c0001t0020g0014	3	188	0.0160	-10	c.148 others(27): Show c.148-2437_148-2428delGTGTGTGTGT		PGAP1	ENSG00000197121.15	transcript	ENST00000354764.9	protein_coding	1/26						chr2	TogoVar
PGAP2_chr11_3803560_3831371	3823024	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG02080.hp1 HG02083.hp2 others(3): Show HG00621.hp2 HG02080.hp1 HG02083.hp2 NA18943.hp2 NA18944.hp2 NA18985.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0011 a0001c0001t0003 a0001c0001t0011	a0001c0001t0003g0033 a0001c0001t0003g0074 a0001c0001t0003g0101 others(2): Show a0001c0001t0003g0033 a0001c0001t0003g0074 a0001c0001t0003g0101 a0001c0001t0003g0139 a0001c0001t0011g0095	6	418	0.0144	-10	c.349 others(25): Show c.349-838_349-829delTTTTTTTTTT		PGAP2	ENSG00000148985.20	transcript	ENST00000278243.9	protein_coding	3/6					INFO_REALIGN_3_PRIME	chr11	TogoVar
PGAP3_chr17_39666122_39693057	39682225	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA20300.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0173 a0001c0001t0001g0173	1	376	0.0027	-10	c.432 others(27): Show c.432+2362_432+2371delTTTTTTTTTT		PGAP3	ENSG00000161395.14	transcript	ENST00000300658.9	protein_coding	3/7						chr17	TogoVar
PGAP3_chr17_39666122_39693057	39683075	CAAATAAA others(3): Show CAAATAAAATA	C C	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0167 a0001c0001t0004g0167	1	376	0.0027	-10	c.432 others(27): Show c.432+1512_432+1521delTATTTTATTT		PGAP3	ENSG00000161395.14	transcript	ENST00000300658.9	protein_coding	3/7						chr17	TogoVar
PGAP3_chr17_39666122_39693057	39684124	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA18988.hp1 NA19055.hp1 NA18988.hp1 NA19055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0126 a0001c0001t0001g0143 a0001c0001t0001g0126 a0001c0001t0001g0143	2	376	0.0053	-10	c.432 others(25): Show c.432+463_432+472delTTTTTTTTTT		PGAP3	ENSG00000161395.14	transcript	ENST00000300658.9	protein_coding	3/7						chr17	TogoVar
PGAP4_chr9_101468170_101492173	101491812	GATATATA others(3): Show GATATATATAT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18975.hp2 NA18975.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0042 a0001c0001t0001g0042	1	460	0.0022	-10	c.-49 others(21): Show c.-4951_-4942delATATATATAT		PGAP4	ENSG00000165152.9	transcript	ENST00000374848.8	protein_coding					4640		chr9	TogoVar
PGAP6_chr16_365788_386978	381807	GCCAGCCC others(3): Show GCCAGCCCGGC	G G	frameshift_variant frameshift_variant	HIGH	HG02132.hp1 HG02132.hp1	a0005 a0005	a0005c0012 a0005c0012	a0005c0012t0023 a0005c0012t0023	a0005c0012t0023g0176 a0005c0012t0023g0176	1	376	0.0027	-10	c.5_1 others(14): Show c.5_14delGCCGGGCTGG	p.Gly others(3): Show p.Gly2fs	PGAP6	ENSG00000129925.11	transcript	ENST00000431232.7	protein_coding	1/13	171/3672	5/2316	2/771			chr16	TogoVar
PGBD1_chr6_28276572_28307549	28297816	GTTTTTTT others(3): Show GTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00558.hp1 HG01074.hp2 others(33): Show HG00140.hp2 HG00558.hp1 HG01074.hp2 HG01099.hp1 HG01106.hp2 HG01516.hp2 HG01517.hp2 HG01934.hp2 HG02040.hp2 HG02145.hp1 HG02257.hp2 HG02258.hp2 HG02559.hp2 HG02602.hp2 HG02622.hp1 HG02647.hp2 HG02698.hp1 HG02723.hp2 HG02818.hp2 HG02886.hp1 HG03130.hp1 HG03130.hp2 HG03225.hp1 HG03491.hp2 HG03516.hp2 HG03579.hp2 HG03831.hp1 HG04184.hp1 HG04204.hp1 NA18612.hp2 NA18747.hp1 NA19002.hp1 NA19043.hp2 NA20300.hp1 NA20752.hp2 homoSapiens_chm13v2.hp1	a0002 a0004 a0002 a0004	a0002c0003 a0004c0004 a0002c0003 a0004c0004	a0002c0003t0001 a0004c0004t0002 a0002c0003t0001 a0004c0004t0002	a0002c0003t0001g0024 a0002c0003t0001g0052 a0002c0003t0001g0053 others(7): Show a0002c0003t0001g0024 a0002c0003t0001g0052 a0002c0003t0001g0053 a0004c0004t0002g0003 a0004c0004t0002g0044 a0004c0004t0002g0110 a0004c0004t0002g0112 a0004c0004t0002g0113 a0004c0004t0002g0114 a0004c0004t0002g0115	36	408	0.0882	-10	c.773 others(23): Show c.773-59_773-50delTTTTTTTTTT		PGBD1	ENSG00000137338.6	transcript	ENST00000682144.1	protein_coding	5/6					INFO_REALIGN_3_PRIME	chr6	TogoVar
PGBD5_chr1_230309490_230431332	230329453	ATATAAGA others(3): Show ATATAAGATAG	A A	intron_variant intron_variant	MODIFIER	NA18974.hp1 NA18974.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0131 a0001c0001t0131	a0001c0001t0131g0269 a0001c0001t0131g0269	1	288	0.0035	-10	c.127 others(29): Show c.1273+3381_1273+3390delCTATCTTATA		PGBD5	ENSG00000177614.11	transcript	ENST00000391860.7	protein_coding	5/6						chr1	TogoVar
PGBD5_chr1_230309490_230431332	230335148	TACACATA others(3): Show TACACATACAG	T T	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01106.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0117 a0001c0001t0117	a0001c0001t0117g0026 a0001c0001t0117g0026	1	288	0.0035	-10	c.107 others(29): Show c.1075+1950_1075+1959delCTGTATGTGT		PGBD5	ENSG00000177614.11	transcript	ENST00000391860.7	protein_coding	4/6						chr1	TogoVar
PGBD5_chr1_230309490_230431332	230335370	GACTTACA others(3): Show GACTTACAGAC	G G	intron_variant intron_variant	MODIFIER	HG03139.hp1 NA19030.hp1 HG03139.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0044 a0001c0001t0089 a0001c0001t0044 a0001c0001t0089	a0001c0001t0044g0004 a0001c0001t0089g0134 a0001c0001t0044g0004 a0001c0001t0089g0134	2	288	0.0069	-10	c.107 others(29): Show c.1075+1728_1075+1737delGTCTGTAAGT		PGBD5	ENSG00000177614.11	transcript	ENST00000391860.7	protein_coding	4/6						chr1	TogoVar
PGBD5_chr1_230309490_230431332	230335520	TACACATA others(3): Show TACACATACAG	T T	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02145.hp2 HG02630.hp2 others(7): Show HG01891.hp1 HG02145.hp2 HG02630.hp2 HG02717.hp2 HG02922.hp2 HG02976.hp2 HG03041.hp2 HG03139.hp2 HG03540.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0008 a0001c0001t0009 a0001c0001t0085 others(2): Show a0001c0001t0008 a0001c0001t0009 a0001c0001t0085 a0001c0002t0092 a0001c0002t0106	a0001c0001t0008g0025 a0001c0001t0008g0041 a0001c0001t0008g0050 others(7): Show a0001c0001t0008g0025 a0001c0001t0008g0041 a0001c0001t0008g0050 a0001c0001t0009g0012 a0001c0001t0009g0014 a0001c0001t0009g0015 a0001c0001t0009g0164 a0001c0001t0085g0013 a0001c0002t0092g0042 a0001c0002t0106g0196	10	288	0.0347	-10	c.107 others(29): Show c.1075+1578_1075+1587delCTGTATGTGT		PGBD5	ENSG00000177614.11	transcript	ENST00000391860.7	protein_coding	4/6						chr1	TogoVar
PGBD5_chr1_230309490_230431332	230335648	CGCACAAA others(3): Show CGCACAAACAG	C C	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01243.hp2 HG01261.hp2 others(14): Show HG01109.hp1 HG01243.hp2 HG01261.hp2 HG02055.hp2 HG02257.hp2 HG02258.hp2 HG02615.hp1 HG02630.hp1 HG02717.hp1 HG02723.hp2 HG02886.hp1 HG02886.hp2 HG02970.hp1 HG03130.hp1 HG03209.hp1 NA18906.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0006 a0001c0001t0019 a0001c0001t0030 others(6): Show a0001c0001t0006 a0001c0001t0019 a0001c0001t0030 a0001c0001t0053 a0001c0001t0056 a0001c0001t0057 a0001c0001t0059 a0001c0002t0034 a0001c0004t0018	a0001c0001t0006g0023 a0001c0001t0006g0053 a0001c0001t0006g0099 others(14): Show a0001c0001t0006g0023 a0001c0001t0006g0053 a0001c0001t0006g0099 a0001c0001t0019g0045 a0001c0001t0019g0049 a0001c0001t0019g0058 a0001c0001t0030g0043 a0001c0001t0030g0160 a0001c0001t0053g0130 a0001c0001t0056g0121 a0001c0001t0057g0052 a0001c0001t0059g0027 a0001c0002t0034g0036 a0001c0002t0034g0178 a0001c0004t0018g0022 a0001c0004t0018g0098 a0001c0004t0018g0177	17	288	0.0590	-10	c.107 others(29): Show c.1075+1450_1075+1459delCTGTTTGTGC		PGBD5	ENSG00000177614.11	transcript	ENST00000391860.7	protein_coding	4/6						chr1	TogoVar
PGBD5_chr1_230309490_230431332	230335920	GACACAGA others(3): Show GACACAGACAC	G G	intron_variant intron_variant	MODIFIER	HG02257.hp1 HG02647.hp2 HG02895.hp2 others(1): Show HG02257.hp1 HG02647.hp2 HG02895.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0028 a0001c0001t0042 a0001c0001t0090 a0001c0001t0028 a0001c0001t0042 a0001c0001t0090	a0001c0001t0028g0018 a0001c0001t0028g0051 a0001c0001t0042g0003 others(1): Show a0001c0001t0028g0018 a0001c0001t0028g0051 a0001c0001t0042g0003 a0001c0001t0090g0009	4	288	0.0139	-10	c.107 others(29): Show c.1075+1178_1075+1187delGTGTCTGTGT		PGBD5	ENSG00000177614.11	transcript	ENST00000391860.7	protein_coding	4/6						chr1	TogoVar
PGBD5_chr1_230309490_230431332	230343162	GTTCTTGG others(3): Show GTTCTTGGTCC	G G	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02145.hp2 HG02630.hp2 others(7): Show HG01891.hp1 HG02145.hp2 HG02630.hp2 HG02717.hp2 HG02922.hp2 HG02976.hp2 HG03041.hp2 HG03139.hp2 HG03540.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0008 a0001c0001t0009 a0001c0001t0085 others(2): Show a0001c0001t0008 a0001c0001t0009 a0001c0001t0085 a0001c0002t0092 a0001c0002t0106	a0001c0001t0008g0025 a0001c0001t0008g0041 a0001c0001t0008g0050 others(7): Show a0001c0001t0008g0025 a0001c0001t0008g0041 a0001c0001t0008g0050 a0001c0001t0009g0012 a0001c0001t0009g0014 a0001c0001t0009g0015 a0001c0001t0009g0164 a0001c0001t0085g0013 a0001c0002t0092g0042 a0001c0002t0106g0196	10	288	0.0347	-10	c.895 others(27): Show c.895-5884_895-5875delGGACCAAGAA		PGBD5	ENSG00000177614.11	transcript	ENST00000391860.7	protein_coding	3/6						chr1	TogoVar
PGC_chr6_41731711_41752397	41738156	ACATATAT others(3): Show ACATATATATG	A A	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00642.hp2 HG01358.hp1 others(7): Show HG00280.hp2 HG00642.hp2 HG01358.hp1 HG01433.hp2 HG02273.hp1 HG02738.hp1 HG03017.hp2 HG03654.hp2 HG04184.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0043 a0001c0001t0001g0087 a0001c0001t0001g0132 others(5): Show a0001c0001t0001g0043 a0001c0001t0001g0087 a0001c0001t0001g0132 a0001c0001t0001g0134 a0001c0001t0001g0136 a0001c0001t0001g0139 a0001c0001t0002g0065 a0001c0001t0002g0259	10	464	0.0216	-10	c.916 others(25): Show c.916-338_916-329delCATATATATG		PGC	ENSG00000096088.16	transcript	ENST00000373025.7	protein_coding	7/8						chr6	TogoVar
PGC_chr6_41731711_41752397	41748953	CCCCAGAG others(3): Show CCCCAGAGGTA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0220 a0001c0001t0001g0220	1	464	0.0022	-10	c.-16 others(21): Show c.-1629_-1620delTACCTCTGGG		PGC	ENSG00000096088.16	transcript	ENST00000373025.7	protein_coding					1557		chr6	TogoVar
PGF_chr14_74936834_74960597	74940553	GACACACA others(3): Show GACACACAGAC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp1 HG00642.hp1 HG00733.hp1 others(21): Show HG00280.hp1 HG00642.hp1 HG00733.hp1 HG00735.hp1 HG01074.hp2 HG01099.hp1 HG01175.hp1 HG01256.hp2 HG01258.hp2 HG01884.hp1 HG01943.hp1 HG02258.hp1 NA18747.hp1 NA18955.hp1 NA18977.hp2 NA18990.hp1 NA18997.hp2 NA19005.hp1 NA19054.hp2 NA19055.hp2 NA19079.hp1 NA19084.hp1 NA19091.hp2 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(8): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0007 a0001c0001t0001g0011 a0001c0001t0001g0029 a0001c0001t0001g0046 a0001c0001t0001g0067 a0001c0001t0001g0083 a0001c0001t0001g0127 a0001c0001t0001g0152	24	406	0.0591	-10	c.21 others(21): Show c.2143_*2152delGTCTGTGTGT		PGF	ENSG00000119630.14	transcript	ENST00000555567.6	protein_coding					1280		chr14	TogoVar
PGF_chr14_74936834_74960597	74940561	GACACACA others(3): Show GACACACACAC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00741.hp2 HG01346.hp2 HG01496.hp1 others(9): Show HG00741.hp2 HG01346.hp2 HG01496.hp1 HG02622.hp1 HG02818.hp2 HG02895.hp1 HG02897.hp1 HG03130.hp1 HG03490.hp2 HG03492.hp2 HG03654.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0068 a0001c0001t0003g0006 a0001c0001t0003g0035 others(3): Show a0001c0001t0001g0068 a0001c0001t0003g0006 a0001c0001t0003g0035 a0001c0001t0003g0039 a0001c0001t0003g0072 a0001c0001t0003g0130	12	406	0.0296	-10	c.21 others(21): Show c.2135_*2144delGTGTGTGTGT		PGF	ENSG00000119630.14	transcript	ENST00000555567.6	protein_coding					1272		chr14	TogoVar
PGF_chr14_74936834_74960597	74950711	GAAGGTTG others(3): Show GAAGGTTGGGA	G G	intron_variant intron_variant	MODIFIER	HG02523.hp2 HG02523.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0116 a0001c0001t0001g0116	1	406	0.0025	-10	c.119 others(27): Show c.119-1168_119-1159delTCCCAACCTT		PGF	ENSG00000119630.14	transcript	ENST00000555567.6	protein_coding	2/6						chr14	TogoVar
PGF_chr14_74936834_74960597	74951164	GCTGCTCC others(3): Show GCTGCTCCATT	G G	intron_variant intron_variant	MODIFIER	NA18957.hp1 NA18957.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0117 a0001c0001t0001g0117	1	406	0.0025	-10	c.119 others(27): Show c.119-1621_119-1612delAATGGAGCAG		PGF	ENSG00000119630.14	transcript	ENST00000555567.6	protein_coding	2/6						chr14	TogoVar
PGGHG_chr11_284126_301107	297042	AGCACAGG others(3): Show AGCACAGGTGG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19062.hp2 NA19062.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0063 a0001c0002t0003g0063	1	450	0.0022	-10	c.22 others(21): Show c.2294_*2303delGCACAGGTGG		PGGHG	ENSG00000142102.16	transcript	ENST00000409548.7	protein_coding					936		chr11	TogoVar
PGGT1B_chr5_115199012_115267877	115201372	CGTGTGTG others(3): Show CGTGTGTGTGT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0063 a0001c0001t0063	a0001c0001t0063g0217 a0001c0001t0063g0217	1	372	0.0027	-10	c.11 others(23): Show c.11020_*11029delACACACACAC		PGGT1B	ENSG00000164219.10	transcript	ENST00000419445.6	protein_coding					2639		chr5	TogoVar
PGGT1B_chr5_115199012_115267877	115207180	CATATATA others(3): Show CATATATATAT	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02083.hp1 HG02083.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0099 a0001c0001t0099	a0001c0001t0099g0154 a0001c0001t0099g0154	1	372	0.0027	-10	c.52 others(21): Show c.5212_*5221delATATATATAT		PGGT1B	ENSG00000164219.10	transcript	ENST00000419445.6	protein_coding	9/9				5212		chr5	TogoVar
PGGT1B_chr5_115199012_115267877	115238291	ATTTTTTT others(3): Show ATTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01496.hp1 HG02717.hp2 others(6): Show HG01243.hp1 HG01496.hp1 HG02717.hp2 HG02818.hp2 HG02886.hp2 HG03130.hp2 NA18522.hp2 NA19043.hp2 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0025 a0001c0001t0046 a0001c0001t0117 others(3): Show a0001c0001t0025 a0001c0001t0046 a0001c0001t0117 a0001c0001t0118 a0001c0001t0119 a0001c0001t0120	a0001c0001t0025g0193 a0001c0001t0025g0194 a0001c0001t0025g0195 others(6): Show a0001c0001t0025g0193 a0001c0001t0025g0194 a0001c0001t0025g0195 a0001c0001t0046g0140 a0001c0001t0046g0192 a0001c0001t0117g0299 a0001c0001t0118g0297 a0001c0001t0119g0298 a0001c0001t0120g0139	9	372	0.0242	-10	c.328 others(25): Show c.328-292_328-283delAAAAAAAAAA		PGGT1B	ENSG00000164219.10	transcript	ENST00000419445.6	protein_coding	3/8						chr5	TogoVar
PGK1_chrX_78099248_78134295	78122409	TTGTGTGT others(3): Show TTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG03579.hp1 NA18747.hp1 HG00609.hp1 HG03579.hp1 NA18747.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0011 a0001c0001t0008 a0001c0001t0011	a0001c0001t0008g0036 a0001c0001t0008g0056 a0001c0001t0011g0036 a0001c0001t0008g0036 a0001c0001t0008g0056 a0001c0001t0011g0036	3	308	0.0097	-10	c.642 others(25): Show c.642-392_642-383delGTGTGTGTGT		PGK1	ENSG00000102144.15	transcript	ENST00000373316.5	protein_coding	6/10					INFO_REALIGN_3_PRIME	chrX	TogoVar
PGK1_chrX_78099248_78134295	78132610	CTGTGTGT others(3): Show CTGTGTGTGTG	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03017.hp1 NA19070.hp1 HG03017.hp1 NA19070.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0001 a0001c0001t0002g0012 a0001c0001t0002g0001 a0001c0001t0002g0012	2	308	0.0065	-10	c.67 others(21): Show c.6781_*6790delTGTGTGTGTG		PGK1	ENSG00000102144.15	transcript	ENST00000373316.5	protein_coding					3316		chrX	TogoVar
PGLS_chr19_17506649_17526288	17518122	AGCATTCA others(3): Show AGCATTCAAAT	A A	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02922.hp2 HG02970.hp1 HG01891.hp2 HG02922.hp2 HG02970.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0002 a0001c0003t0001 a0001c0003t0002	a0001c0003t0001g0056 a0001c0003t0002g0030 a0001c0003t0001g0056 a0001c0003t0002g0030	3	442	0.0068	-10	c.639 others(25): Show c.639+278_639+287delCAAATGCATT		PGLS	ENSG00000130313.7	transcript	ENST00000252603.7	protein_coding	4/4					INFO_REALIGN_3_PRIME	chr19	TogoVar
PGLS_chr19_17506649_17526288	17525547	GTCTTTTC others(3): Show GTCTTTTCACC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0006 a0001c0003t0001g0006	1	442	0.0023	-10	c.44 others(21): Show c.4467_*4476delTCTTTTCACC		PGLS	ENSG00000130313.7	transcript	ENST00000252603.7	protein_coding					4260		chr19	TogoVar
PGLYRP1_chr19_46014153_46028053	46021606	ACCTGCTT others(3): Show ACCTGCTTCAG	A A	intron_variant intron_variant	MODIFIER	HG03017.hp1 NA20805.hp1 HG03017.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0043 a0001c0001t0001g0044	2	456	0.0044	-10	c.287 others(27): Show c.287+1119_287+1128delCTGAAGCAGG		PGLYRP1	ENSG00000008438.5	transcript	ENST00000008938.5	protein_coding	1/2						chr19	TogoVar
PGLYRP2_chr19_15463645_15484501	15471103	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02027.hp2 HG02027.hp2	a0020 a0020	a0020c0020 a0020c0020	a0020c0020t0001 a0020c0020t0001	a0020c0020t0001g0151 a0020c0020t0001g0151	1	382	0.0026	-10	c.134 others(27): Show c.1343+777_1343+786delAAAAAAAAAA		PGLYRP2	ENSG00000161031.13	transcript	ENST00000340880.5	protein_coding	3/4						chr19	TogoVar
PGLYRP2_chr19_15463645_15484501	15473470	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00735.hp2 HG00738.hp1 others(44): Show HG00323.hp2 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG01069.hp1 HG01071.hp1 HG01081.hp1 HG01099.hp2 HG01109.hp1 HG01255.hp2 HG01358.hp1 HG01516.hp1 HG01928.hp1 HG01934.hp1 HG01993.hp1 HG02015.hp2 HG02080.hp2 HG02135.hp2 HG02559.hp2 HG02647.hp2 HG03139.hp2 HG06807.hp2 NA18747.hp1 NA18906.hp2 NA18946.hp1 NA18951.hp1 NA18953.hp2 NA18960.hp2 NA18963.hp2 NA18966.hp2 NA18971.hp2 NA18981.hp2 NA18982.hp1 NA18983.hp1 NA18993.hp2 NA19003.hp1 NA19004.hp2 NA19007.hp2 NA19067.hp2 NA19070.hp2 NA19077.hp1 NA19080.hp1 NA19085.hp1 NA19087.hp2 NA19090.hp1 NA19091.hp2 NA20752.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0013	a0001c0001 a0002c0002 a0003c0003 others(2): Show a0001c0001 a0002c0002 a0003c0003 a0004c0004 a0013c0021	a0001c0001t0001 a0002c0002t0001 a0003c0003t0001 others(2): Show a0001c0001t0001 a0002c0002t0001 a0003c0003t0001 a0004c0004t0001 a0013c0021t0001	a0001c0001t0001g0202 a0002c0002t0001g0001 a0002c0002t0001g0004 others(32): Show a0001c0001t0001g0202 a0002c0002t0001g0001 a0002c0002t0001g0004 a0002c0002t0001g0005 a0002c0002t0001g0006 a0002c0002t0001g0014 a0002c0002t0001g0050 a0002c0002t0001g0051 a0002c0002t0001g0052 a0002c0002t0001g0053 a0002c0002t0001g0073 a0002c0002t0001g0074 a0002c0002t0001g0081 a0002c0002t0001g0082 a0002c0002t0001g0084 a0002c0002t0001g0085 a0002c0002t0001g0086 a0002c0002t0001g0104 a0002c0002t0001g0105 a0002c0002t0001g0112 a0002c0002t0001g0117 a0002c0002t0001g0204 a0002c0002t0001g0212 a0003c0003t0001g0139 a0003c0003t0001g0141 a0004c0004t0001g0015 a0004c0004t0001g0057 a0004c0004t0001g0083 a0004c0004t0001g0087 a0004c0004t0001g0088 a0004c0004t0001g0089 a0004c0004t0001g0090 a0004c0004t0001g0113 a0004c0004t0001g0118 a0013c0021t0001g0075	47	382	0.1230	-10	c.113 others(29): Show c.1133-1380_1133-1371delTTTTTTTTTT		PGLYRP2	ENSG00000161031.13	transcript	ENST00000340880.5	protein_coding	2/4						chr19	TogoVar
PGLYRP2_chr19_15463645_15484501	15482561	TTTCTTCC others(3): Show TTTCTTCCTTC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00639.hp2 HG01074.hp1 HG01257.hp2 others(13): Show HG00639.hp2 HG01074.hp1 HG01257.hp2 HG01975.hp1 HG02293.hp2 HG02622.hp2 HG02735.hp2 HG03017.hp2 HG03225.hp1 HG03239.hp1 HG03710.hp1 HG03831.hp2 HG04228.hp2 NA18943.hp1 NA19240.hp2 homoSapiens_chm13v2.hp1	a0001 a0004 a0011 others(1): Show a0001 a0004 a0011 a0017	a0001c0001 a0004c0004 a0011c0012 others(1): Show a0001c0001 a0004c0004 a0011c0012 a0017c0017	a0001c0001t0001 a0004c0004t0001 a0011c0012t0001 others(1): Show a0001c0001t0001 a0004c0004t0001 a0011c0012t0001 a0017c0017t0001	a0001c0001t0001g0029 a0001c0001t0001g0076 a0001c0001t0001g0208 others(13): Show a0001c0001t0001g0029 a0001c0001t0001g0076 a0001c0001t0001g0208 a0001c0001t0001g0249 a0001c0001t0001g0282 a0001c0001t0001g0287 a0001c0001t0001g0311 a0001c0001t0001g0318 a0001c0001t0001g0319 a0001c0001t0001g0321 a0001c0001t0001g0331 a0004c0004t0001g0108 a0004c0004t0001g0109 a0011c0012t0001g0300 a0011c0012t0001g0323 a0017c0017t0001g0247	16	382	0.0419	-10	c.-32 others(21): Show c.-3200_-3191delGAAGGAAGAA		PGLYRP2	ENSG00000161031.13	transcript	ENST00000340880.5	protein_coding					3061		chr19	TogoVar
PGLYRP2_chr19_15463645_15484501	15482607	CCTTCCTT others(3): Show CCTTCCTTCTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0178 a0001c0001t0001g0178	1	382	0.0026	-10	c.-32 others(21): Show c.-3246_-3237delAAGAAGGAAG		PGLYRP2	ENSG00000161031.13	transcript	ENST00000340880.5	protein_coding					3107		chr19	TogoVar
PGM1_chr1_63588411_63665245	63604917	CTGTGTGT others(3): Show CTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG02886.hp1 HG02896.hp2 HG01167.hp1 HG02886.hp1 HG02896.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0002 a0004c0004 a0001c0001 a0002c0002 a0004c0004	a0001c0001t0003 a0002c0002t0003 a0004c0004t0003 a0001c0001t0003 a0002c0002t0003 a0004c0004t0003	a0001c0001t0003g0140 a0002c0002t0003g0152 a0004c0004t0003g0158 a0001c0001t0003g0140 a0002c0002t0003g0152 a0004c0004t0003g0158	3	366	0.0082	-10	c.246 others(29): Show c.246+11217_246+11226delGTGTGTGTGT		PGM1	ENSG00000079739.17	transcript	ENST00000371084.8	protein_coding	1/10					INFO_REALIGN_3_PRIME	chr1	TogoVar
PGM1_chr1_63588411_63665245	63615550	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02970.hp2 HG03098.hp2 others(4): Show HG02559.hp1 HG02970.hp2 HG03098.hp2 HG03139.hp1 HG03209.hp2 HG03453.hp1 HG03540.hp1	a0001 a0007 a0010 a0001 a0007 a0010	a0001c0001 a0001c0006 a0001c0017 others(2): Show a0001c0001 a0001c0006 a0001c0017 a0007c0010 a0010c0015	a0001c0001t0001 a0001c0001t0003 a0001c0006t0003 others(4): Show a0001c0001t0001 a0001c0001t0003 a0001c0006t0003 a0001c0017t0001 a0007c0010t0003 a0007c0010t0005 a0010c0015t0001	a0001c0001t0001g0351 a0001c0001t0003g0082 a0001c0006t0003g0346 others(4): Show a0001c0001t0001g0351 a0001c0001t0003g0082 a0001c0006t0003g0346 a0001c0017t0001g0345 a0007c0010t0003g0080 a0007c0010t0005g0081 a0010c0015t0001g0079	7	366	0.0191	-10	c.247 others(29): Show c.247-13854_247-13845delTTTTTTTTTT		PGM1	ENSG00000079739.17	transcript	ENST00000371084.8	protein_coding	1/10					INFO_REALIGN_3_PRIME	chr1	TogoVar
PGM1_chr1_63588411_63665245	63633866	CTGTGTGT others(3): Show CTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG01993.hp2 HG02040.hp2 others(6): Show HG00558.hp2 HG01993.hp2 HG02040.hp2 HG02886.hp1 HG03927.hp1 NA18942.hp2 NA18950.hp2 NA18957.hp2 NA19010.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0008 a0003c0003 a0001c0001 a0001c0008 a0003c0003	a0001c0001t0001 a0001c0001t0003 a0001c0001t0011 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0011 a0001c0008t0001 a0003c0003t0002	a0001c0001t0001g0032 a0001c0001t0001g0229 a0001c0001t0001g0270 others(6): Show a0001c0001t0001g0032 a0001c0001t0001g0229 a0001c0001t0001g0270 a0001c0001t0001g0303 a0001c0001t0003g0140 a0001c0001t0011g0066 a0001c0008t0001g0103 a0001c0008t0001g0339 a0003c0003t0002g0359	9	366	0.0246	-10	c.683 others(25): Show c.683-919_683-910delGTGTGTGTGT		PGM1	ENSG00000079739.17	transcript	ENST00000371084.8	protein_coding	4/10					INFO_REALIGN_3_PRIME	chr1	TogoVar
PGM1_chr1_63588411_63665245	63633912	GTGTGTGT others(3): Show GTGTGTGTATA	G G	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG00733.hp1	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0001 a0005c0005t0001	a0005c0005t0001g0203 a0005c0005t0001g0203	1	366	0.0027	-10	c.683 others(25): Show c.683-915_683-906delGTGTGTATAT		PGM1	ENSG00000079739.17	transcript	ENST00000371084.8	protein_coding	4/10					INFO_REALIGN_3_PRIME	chr1	TogoVar
PGM1_chr1_63588411_63665245	63633914	GTGTGTAT others(3): Show GTGTGTATATA	G G	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG03195.hp2 HG03225.hp2 others(3): Show HG02976.hp1 HG03195.hp2 HG03225.hp2 HG03471.hp1 HG03540.hp2 NA20129.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0005c0005 a0001c0001 a0005c0005	a0001c0001t0001 a0001c0001t0003 a0005c0005t0001 a0001c0001t0001 a0001c0001t0003 a0005c0005t0001	a0001c0001t0001g0085 a0001c0001t0001g0155 a0001c0001t0001g0156 others(3): Show a0001c0001t0001g0085 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0169 a0001c0001t0003g0182 a0005c0005t0001g0030	6	366	0.0164	-10	c.683 others(25): Show c.683-913_683-904delGTGTATATAT		PGM1	ENSG00000079739.17	transcript	ENST00000371084.8	protein_coding	4/10					INFO_REALIGN_3_PRIME	chr1	TogoVar
PGM1_chr1_63588411_63665245	63647259	CATATATA others(3): Show CATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02293.hp2 NA19080.hp2 NA19085.hp1 others(1): Show HG02293.hp2 NA19080.hp2 NA19085.hp1 NA20300.hp1	a0001 a0013 a0001 a0013	a0001c0001 a0013c0019 a0001c0001 a0013c0019	a0001c0001t0001 a0013c0019t0001 a0001c0001t0001 a0013c0019t0001	a0001c0001t0001g0007 a0001c0001t0001g0061 a0001c0001t0001g0185 others(1): Show a0001c0001t0001g0007 a0001c0001t0001g0061 a0001c0001t0001g0185 a0013c0019t0001g0238	4	366	0.0109	-10	c.114 others(29): Show c.1145-1218_1145-1209delTATATATATA		PGM1	ENSG00000079739.17	transcript	ENST00000371084.8	protein_coding	7/10					INFO_REALIGN_3_PRIME	chr1	TogoVar
PGM1_chr1_63588411_63665245	63656598	GTGTGTGT others(3): Show GTGTGTGTGTA	G G	intron_variant intron_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0005 a0005	a0005c0005 a0005c0005	a0005c0005t0001 a0005c0005t0001	a0005c0005t0001g0171 a0005c0005t0001g0171	1	366	0.0027	-10	c.159 others(29): Show c.1599+2134_1599+2143delGTGTGTGTAT		PGM1	ENSG00000079739.17	transcript	ENST00000371084.8	protein_coding	10/10					INFO_REALIGN_3_PRIME	chr1	TogoVar
PGM2L1_chr11_74325316_74403433	74343769	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02630.hp1 HG02630.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0002	a0003c0003t0002g0090 a0003c0003t0002g0090	1	380	0.0026	-10	c.121 others(27): Show c.1219-363_1219-354delAAAAAAAAAA		PGM2L1	ENSG00000165434.8	transcript	ENST00000298198.5	protein_coding	9/13						chr11	TogoVar
PGM2L1_chr11_74325316_74403433	74350889	AAGAAAGA others(3): Show AAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG02148.hp2 HG03669.hp1 HG02148.hp2 HG03669.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0145 a0002c0002t0004g0168 a0002c0002t0004g0145 a0002c0002t0004g0168	2	380	0.0053	-10	c.749 others(25): Show c.749+484_749+493delCTTTCTTTCT		PGM2L1	ENSG00000165434.8	transcript	ENST00000298198.5	protein_coding	6/13						chr11	TogoVar
PGM2L1_chr11_74325316_74403433	74351303	ACACTTTT others(3): Show ACACTTTTTAT	A A	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02257.hp1 HG02258.hp2 others(8): Show HG01884.hp1 HG02257.hp1 HG02258.hp2 HG02717.hp1 HG02723.hp1 HG02970.hp2 HG02976.hp1 HG03041.hp2 HG03195.hp1 HG03225.hp1 NA19240.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0008 a0001c0004t0008	a0001c0004t0008g0010 a0001c0004t0008g0011 a0001c0004t0008g0012 others(5): Show a0001c0004t0008g0010 a0001c0004t0008g0011 a0001c0004t0008g0012 a0001c0004t0008g0255 a0001c0004t0008g0256 a0001c0004t0008g0258 a0001c0004t0008g0259 a0001c0004t0008g0260	11	380	0.0290	-10	c.749 others(23): Show c.749+70_749+79delATAAAAAGTG		PGM2L1	ENSG00000165434.8	transcript	ENST00000298198.5	protein_coding	6/13						chr11	TogoVar
PGM2L1_chr11_74325316_74403433	74355570	AAAAAAAA others(3): Show AAAAAAAAAAT	A A	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00408.hp2 HG00423.hp1 others(82): Show HG00280.hp1 HG00408.hp2 HG00423.hp1 HG00438.hp2 HG00544.hp1 HG00597.hp1 HG00609.hp2 HG00621.hp1 HG00642.hp1 HG00673.hp2 HG00733.hp1 HG00738.hp1 HG01123.hp1 HG01175.hp1 HG01257.hp1 HG01516.hp2 HG01517.hp2 HG02015.hp2 HG02040.hp1 HG02074.hp1 HG02080.hp1 HG02129.hp1 HG02135.hp1 HG02145.hp2 HG02293.hp1 HG02523.hp1 HG02630.hp1 HG02818.hp2 HG02896.hp2 HG03017.hp2 HG03041.hp1 HG03139.hp2 HG03225.hp2 HG03239.hp2 HG03490.hp2 HG03491.hp1 HG03492.hp1 HG03540.hp1 HG03654.hp1 HG03927.hp1 HG04184.hp2 HG04199.hp1 NA18941.hp2 NA18944.hp1 NA18948.hp1 NA18949.hp2 NA18950.hp1 NA18957.hp1 NA18959.hp1 NA18962.hp2 NA18963.hp1 NA18969.hp2 NA18970.hp1 NA18977.hp2 NA18978.hp1 NA18980.hp1 NA18982.hp1 NA18983.hp1 NA18988.hp2 NA18989.hp2 NA18991.hp1 NA18997.hp1 NA18998.hp1 NA19001.hp2 NA19004.hp2 NA19005.hp1 NA19007.hp1 NA19010.hp2 NA19011.hp1 NA19058.hp2 NA19060.hp1 NA19062.hp1 NA19066.hp2 NA19068.hp1 NA19070.hp1 NA19074.hp1 NA19075.hp2 NA19076.hp2 NA19077.hp2 NA19079.hp2 NA19080.hp1 NA19081.hp2 NA19083.hp1 NA19088.hp1 NA19089.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0002 a0001c0001t0042 a0001c0001t0043 others(8): Show a0001c0001t0002 a0001c0001t0042 a0001c0001t0043 a0003c0003t0002 a0003c0003t0006 a0003c0003t0007 a0003c0003t0012 a0003c0003t0018 a0003c0003t0021 a0003c0003t0037 a0003c0003t0041	a0001c0001t0002g0110 a0001c0001t0002g0127 a0001c0001t0002g0139 others(76): Show a0001c0001t0002g0110 a0001c0001t0002g0127 a0001c0001t0002g0139 a0001c0001t0002g0273 a0001c0001t0002g0306 a0001c0001t0002g0327 a0001c0001t0042g0326 a0001c0001t0043g0111 a0003c0003t0002g0004 a0003c0003t0002g0006 a0003c0003t0002g0007 a0003c0003t0002g0025 a0003c0003t0002g0028 a0003c0003t0002g0029 a0003c0003t0002g0030 a0003c0003t0002g0031 a0003c0003t0002g0032 a0003c0003t0002g0034 a0003c0003t0002g0035 a0003c0003t0002g0037 a0003c0003t0002g0041 a0003c0003t0002g0043 a0003c0003t0002g0044 a0003c0003t0002g0046 a0003c0003t0002g0047 a0003c0003t0002g0049 a0003c0003t0002g0052 a0003c0003t0002g0056 a0003c0003t0002g0057 a0003c0003t0002g0059 a0003c0003t0002g0061 a0003c0003t0002g0064 a0003c0003t0002g0066 a0003c0003t0002g0071 a0003c0003t0002g0072 a0003c0003t0002g0074 a0003c0003t0002g0075 a0003c0003t0002g0076 a0003c0003t0002g0082 a0003c0003t0002g0084 a0003c0003t0002g0085 a0003c0003t0002g0086 a0003c0003t0002g0087 a0003c0003t0002g0090 a0003c0003t0002g0091 a0003c0003t0002g0092 a0003c0003t0006g0005 a0003c0003t0006g0027 a0003c0003t0006g0033 a0003c0003t0006g0038 a0003c0003t0006g0045 a0003c0003t0006g0053 a0003c0003t0006g0060 a0003c0003t0006g0063 a0003c0003t0006g0070 a0003c0003t0006g0073 a0003c0003t0006g0077 a0003c0003t0006g0078 a0003c0003t0007g0002 a0003c0003t0007g0003 a0003c0003t0007g0014 a0003c0003t0007g0015 a0003c0003t0007g0016 a0003c0003t0007g0017 a0003c0003t0007g0019 a0003c0003t0007g0020 a0003c0003t0007g0021 a0003c0003t0012g0039 a0003c0003t0012g0048 a0003c0003t0012g0050 a0003c0003t0012g0062 a0003c0003t0012g0065 a0003c0003t0018g0040 a0003c0003t0018g0042 a0003c0003t0018g0083 a0003c0003t0021g0026 a0003c0003t0021g0036 a0003c0003t0037g0051 a0003c0003t0041g0069	85	380	0.2237	-10	c.556 others(27): Show c.556-4004_556-3995delATTTTTTTTT		PGM2L1	ENSG00000165434.8	transcript	ENST00000298198.5	protein_coding	5/13						chr11	TogoVar
PGM2L1_chr11_74325316_74403433	74385425	ACAATTTA others(3): Show ACAATTTAAGG	A A	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0022	a0001c0001t0022g0356 a0001c0001t0022g0356	1	380	0.0026	-10	c.112 others(29): Show c.112-10853_112-10844delCCTTAAATTG		PGM2L1	ENSG00000165434.8	transcript	ENST00000298198.5	protein_coding	1/13						chr11	TogoVar

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