Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
PGM2L1_chr11_74325316_74403433	74403232	CAAAAAGT others(3): Show CAAAAAGTTTA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19010.hp2 NA19010.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0002	a0003c0003t0002g0059 a0003c0003t0002g0059	1	380	0.0026	-10	c.-50 others(21): Show c.-5081_-5072delTAAACTTTTT	PGM2L1	ENSG00000165434.8	transcript	ENST00000298198.5	protein_coding		4800		chr11	TogoVar
PGM2_chr4_37821686_37867937	37821880	TAAAAAAA others(3): Show TAAAAAAAAAA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00280.hp1 others(114): Show HG00099.hp2 HG00140.hp1 HG00280.hp1 HG00544.hp2 HG00621.hp1 HG00673.hp1 HG00673.hp2 HG00733.hp2 HG00738.hp2 HG01106.hp1 HG01109.hp2 HG01168.hp2 HG01169.hp2 HG01258.hp2 HG01261.hp2 HG01346.hp2 HG01358.hp1 HG01361.hp1 HG01516.hp2 HG01884.hp1 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01943.hp2 HG01952.hp1 HG01978.hp2 HG02074.hp2 HG02132.hp1 HG02257.hp1 HG02258.hp1 HG02300.hp2 HG02523.hp2 HG02809.hp1 HG03098.hp2 HG03139.hp2 HG03225.hp2 HG03239.hp1 HG03490.hp2 HG03491.hp2 HG03492.hp1 HG03579.hp1 HG03669.hp2 HG03688.hp1 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03942.hp1 HG04115.hp1 HG04184.hp1 HG04204.hp2 HG04228.hp2 NA18612.hp1 NA18612.hp2 NA18940.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18947.hp1 NA18948.hp2 NA18950.hp1 NA18952.hp1 NA18956.hp1 NA18957.hp1 NA18960.hp2 NA18961.hp1 NA18962.hp2 NA18964.hp2 NA18965.hp2 NA18966.hp1 NA18968.hp1 NA18971.hp2 NA18972.hp1 NA18973.hp1 NA18974.hp2 NA18977.hp2 NA18981.hp2 NA18983.hp2 NA18986.hp2 NA18987.hp1 NA18991.hp1 NA18992.hp2 NA18993.hp1 NA18994.hp1 NA18995.hp1 NA18995.hp2 NA18999.hp1 NA18999.hp2 NA19003.hp2 NA19004.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp1 NA19012.hp1 NA19043.hp1 NA19054.hp2 NA19056.hp1 NA19057.hp1 NA19060.hp2 NA19062.hp1 NA19063.hp1 NA19066.hp2 NA19068.hp2 NA19072.hp1 NA19074.hp1 NA19075.hp2 NA19077.hp1 NA19078.hp1 NA19079.hp2 NA19080.hp1 NA19088.hp2 NA19091.hp1 NA20129.hp2 NA20300.hp2 NA20805.hp1 NA20905.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0001c0002 a0001c0004 others(2): Show a0001c0001 a0001c0002 a0001c0004 a0001c0019 a0007c0020	a0001c0001t0001 a0001c0001t0003 a0001c0002t0002 others(4): Show a0001c0001t0001 a0001c0001t0003 a0001c0002t0002 a0001c0004t0001 a0001c0004t0007 a0001c0019t0001 a0007c0020t0001	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0011 others(100): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0026 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0041 a0001c0001t0001g0058 a0001c0001t0001g0205 a0001c0001t0001g0301 a0001c0001t0001g0302 a0001c0001t0001g0303 a0001c0001t0001g0304 a0001c0001t0001g0305 a0001c0001t0001g0306 a0001c0001t0001g0307 a0001c0001t0001g0308 a0001c0001t0001g0309 a0001c0001t0001g0310 a0001c0001t0001g0311 a0001c0001t0001g0312 a0001c0001t0001g0314 a0001c0001t0001g0315 a0001c0001t0001g0316 a0001c0001t0001g0317 a0001c0001t0001g0318 a0001c0001t0001g0319 a0001c0001t0001g0320 a0001c0001t0001g0321 a0001c0001t0001g0322 a0001c0001t0001g0323 a0001c0001t0001g0324 a0001c0001t0001g0325 a0001c0001t0001g0326 a0001c0001t0001g0327 a0001c0001t0001g0328 a0001c0001t0001g0329 a0001c0001t0001g0330 a0001c0001t0001g0331 a0001c0001t0001g0332 a0001c0001t0001g0333 a0001c0001t0001g0334 a0001c0001t0001g0335 a0001c0001t0001g0337 a0001c0001t0001g0338 a0001c0001t0001g0339 a0001c0001t0001g0340 a0001c0001t0001g0341 a0001c0001t0001g0342 a0001c0001t0001g0343 a0001c0001t0001g0344 a0001c0001t0001g0345 a0001c0001t0001g0346 a0001c0001t0001g0347 a0001c0001t0001g0348 a0001c0001t0001g0349 a0001c0001t0001g0350 a0001c0001t0001g0351 a0001c0001t0001g0352 a0001c0001t0001g0353 a0001c0001t0001g0354 a0001c0001t0001g0355 a0001c0001t0001g0356 a0001c0001t0001g0357 a0001c0001t0001g0358 a0001c0001t0001g0359 a0001c0001t0001g0360 a0001c0001t0001g0361 a0001c0001t0001g0362 a0001c0001t0001g0363 a0001c0001t0001g0364 a0001c0001t0001g0365 a0001c0001t0001g0366 a0001c0001t0001g0367 a0001c0001t0001g0368 a0001c0001t0001g0370 a0001c0001t0001g0371 a0001c0001t0001g0372 a0001c0001t0001g0373 a0001c0001t0001g0374 a0001c0001t0001g0375 a0001c0001t0001g0376 a0001c0001t0001g0377 a0001c0001t0001g0378 a0001c0001t0001g0379 a0001c0001t0001g0382 a0001c0001t0001g0383 a0001c0001t0001g0384 a0001c0001t0001g0387 a0001c0001t0003g0336 a0001c0002t0002g0067 a0001c0002t0002g0078 a0001c0002t0002g0079 a0001c0002t0002g0102 a0001c0004t0001g0074 a0001c0004t0007g0260 a0001c0019t0001g0313 a0007c0020t0001g0369	117	446	0.2623	-10	c.-48 others(21): Show c.-4852_-4843delAAAAAAAAAA	PGM2	ENSG00000169299.14	transcript	ENST00000381967.9	protein_coding		4805		chr4	TogoVar
PGM3_chr6_83159873_83198265	83185188	CCAATGCT others(3): Show CCAATGCTTTA	C C	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00408.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0055 a0001c0001t0001g0055	1	344	0.0029	-10	c.457 others(27): Show c.457+1810_457+1819delTAAAGCATTG	PGM3	ENSG00000013375.17	transcript	ENST00000513973.6	protein_coding	4/12			chr6	TogoVar
PGM5_chr9_68351611_68536061	68357912	AACACACA others(3): Show AACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00408.hp2 HG00423.hp1 others(21): Show HG00099.hp2 HG00408.hp2 HG00423.hp1 HG00438.hp1 HG00597.hp2 HG01255.hp2 HG01258.hp1 HG01978.hp2 HG02056.hp2 HG02523.hp1 HG02559.hp1 HG02895.hp2 HG03486.hp2 HG03492.hp1 HG06807.hp2 NA18952.hp2 NA18972.hp2 NA18975.hp1 NA18982.hp2 NA18999.hp2 NA19067.hp2 NA19086.hp2 NA20129.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 others(1): Show a0001c0001 a0001c0002 a0001c0005 a0001c0011	a0001c0001t0031 a0001c0002t0002 a0001c0002t0008 others(3): Show a0001c0001t0031 a0001c0002t0002 a0001c0002t0008 a0001c0005t0009 a0001c0005t0016 a0001c0011t0002	a0001c0001t0031g0040 a0001c0002t0002g0021 a0001c0002t0002g0022 others(21): Show a0001c0001t0031g0040 a0001c0002t0002g0021 a0001c0002t0002g0022 a0001c0002t0002g0023 a0001c0002t0002g0024 a0001c0002t0002g0027 a0001c0002t0002g0028 a0001c0002t0002g0029 a0001c0002t0002g0031 a0001c0002t0002g0032 a0001c0002t0002g0033 a0001c0002t0002g0035 a0001c0002t0002g0036 a0001c0002t0002g0037 a0001c0002t0002g0038 a0001c0002t0002g0039 a0001c0002t0008g0025 a0001c0002t0008g0026 a0001c0002t0008g0034 a0001c0005t0009g0208 a0001c0005t0009g0209 a0001c0005t0009g0210 a0001c0005t0016g0088 a0001c0011t0002g0030	24	246	0.0976	-10	c.261 others(25): Show c.261+567_261+576delACACACACAC	PGM5	ENSG00000154330.13	transcript	ENST00000396396.6	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr9	TogoVar
PGM5_chr9_68351611_68536061	68363148	GTGTGAGC others(3): Show GTGTGAGCCAC	G G	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02615.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0203 a0001c0001t0001g0203	1	246	0.0041	-10	c.261 others(27): Show c.261+5763_261+5772delTGAGCCACTG	PGM5	ENSG00000154330.13	transcript	ENST00000396396.6	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr9	TogoVar
PGM5_chr9_68351611_68536061	68376475	CTGTGTGT others(3): Show CTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG02027.hp2 HG02647.hp1 others(3): Show HG01261.hp1 HG02027.hp2 HG02647.hp1 HG02895.hp1 HG02895.hp2 HG02897.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0005 a0001c0001 a0001c0003 a0001c0005	a0001c0001t0002 a0001c0001t0003 a0001c0001t0018 others(2): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0018 a0001c0003t0009 a0001c0005t0009	a0001c0001t0002g0073 a0001c0001t0003g0199 a0001c0001t0018g0085 others(3): Show a0001c0001t0002g0073 a0001c0001t0003g0199 a0001c0001t0018g0085 a0001c0003t0009g0229 a0001c0003t0009g0230 a0001c0005t0009g0209	6	246	0.0244	-10	c.262 others(27): Show c.262-1684_262-1675delGTGTGTGTGT	PGM5	ENSG00000154330.13	transcript	ENST00000396396.6	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr9	TogoVar
PGM5_chr9_68351611_68536061	68376805	CTTTCTTT others(3): Show CTTTCTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG02155.hp1 HG02155.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0042 a0001c0002t0002g0042	1	246	0.0041	-10	c.262 others(27): Show c.262-1392_262-1383delTTCTTTCTTT	PGM5	ENSG00000154330.13	transcript	ENST00000396396.6	protein_coding	1/10		INFO_REALIGN_3_PRIME	chr9	TogoVar
PGM5_chr9_68351611_68536061	68401885	ATATATGT others(3): Show ATATATGTGTG	A A	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp1 HG00323.hp1 others(75): Show HG00099.hp2 HG00280.hp1 HG00323.hp1 HG00408.hp2 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00597.hp1 HG00597.hp2 HG00639.hp2 HG00642.hp2 HG00738.hp1 HG01071.hp1 HG01081.hp2 HG01109.hp1 HG01109.hp2 HG01169.hp1 HG01175.hp1 HG01255.hp1 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01346.hp1 HG01346.hp2 HG01496.hp2 HG01978.hp2 HG02055.hp2 HG02056.hp2 HG02080.hp2 HG02109.hp2 HG02129.hp2 HG02135.hp2 HG02145.hp2 HG02148.hp2 HG02155.hp1 HG02257.hp1 HG02523.hp1 HG02602.hp1 HG02602.hp2 HG02615.hp2 HG02630.hp1 HG02723.hp1 HG02735.hp2 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG03130.hp2 HG03492.hp1 HG03579.hp2 HG03831.hp2 HG03942.hp2 HG04199.hp2 HG04204.hp1 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18906.hp1 NA18940.hp1 NA18943.hp1 NA18946.hp2 NA18952.hp2 NA18955.hp1 NA18963.hp1 NA18967.hp2 NA18968.hp1 NA18972.hp2 NA18975.hp1 NA18982.hp2 NA18999.hp2 NA19003.hp1 NA19056.hp2 NA19057.hp2 NA19063.hp1 NA19067.hp2 NA19075.hp1 NA19086.hp2 NA20129.hp2 NA20752.hp1	a0001 a0004 a0005 a0001 a0004 a0005	a0001c0001 a0001c0002 a0001c0004 others(4): Show a0001c0001 a0001c0002 a0001c0004 a0001c0005 a0001c0011 a0004c0009 a0005c0015	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(14): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0012 a0001c0001t0016 a0001c0002t0001 a0001c0002t0002 a0001c0002t0008 a0001c0002t0013 a0001c0002t0026 a0001c0004t0005 a0001c0004t0028 a0001c0005t0016 a0001c0011t0002 a0004c0009t0019 a0005c0015t0012	a0001c0001t0001g0096 a0001c0001t0001g0187 a0001c0001t0002g0071 others(75): Show a0001c0001t0001g0096 a0001c0001t0001g0187 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0082 a0001c0001t0003g0120 a0001c0001t0003g0163 a0001c0001t0003g0172 a0001c0001t0003g0173 a0001c0001t0003g0177 a0001c0001t0003g0178 a0001c0001t0003g0179 a0001c0001t0003g0180 a0001c0001t0003g0181 a0001c0001t0003g0182 a0001c0001t0003g0183 a0001c0001t0003g0198 a0001c0001t0003g0199 a0001c0001t0007g0158 a0001c0001t0007g0160 a0001c0001t0007g0161 a0001c0001t0007g0162 a0001c0001t0007g0164 a0001c0001t0007g0232 a0001c0001t0007g0233 a0001c0001t0012g0174 a0001c0001t0012g0231 a0001c0001t0016g0092 a0001c0002t0001g0125 a0001c0002t0002g0010 a0001c0002t0002g0014 a0001c0002t0002g0015 a0001c0002t0002g0016 a0001c0002t0002g0021 a0001c0002t0002g0022 a0001c0002t0002g0024 a0001c0002t0002g0027 a0001c0002t0002g0028 a0001c0002t0002g0029 a0001c0002t0002g0031 a0001c0002t0002g0032 a0001c0002t0002g0033 a0001c0002t0002g0035 a0001c0002t0002g0036 a0001c0002t0002g0037 a0001c0002t0002g0038 a0001c0002t0002g0039 a0001c0002t0002g0041 a0001c0002t0002g0042 a0001c0002t0002g0043 a0001c0002t0002g0049 a0001c0002t0002g0050 a0001c0002t0002g0051 a0001c0002t0002g0052 a0001c0002t0002g0054 a0001c0002t0002g0055 a0001c0002t0002g0056 a0001c0002t0002g0057 a0001c0002t0002g0059 a0001c0002t0002g0060 a0001c0002t0002g0063 a0001c0002t0002g0064 a0001c0002t0002g0067 a0001c0002t0002g0068 a0001c0002t0002g0083 a0001c0002t0008g0025 a0001c0002t0008g0026 a0001c0002t0008g0034 a0001c0002t0008g0065 a0001c0002t0013g0048 a0001c0002t0026g0061 a0001c0004t0005g0241 a0001c0004t0005g0244 a0001c0004t0028g0236 a0001c0005t0016g0087 a0001c0011t0002g0030 a0004c0009t0019g0246 a0005c0015t0012g0122	78	246	0.3171	-10	c.104 others(29): Show c.1043+9414_1043+9423delATATGTGTGT	PGM5	ENSG00000154330.13	transcript	ENST00000396396.6	protein_coding	6/10		INFO_REALIGN_3_PRIME	chr9	TogoVar
PGM5_chr9_68351611_68536061	68401921	GTGTGTGT others(3): Show GTGTGTGTGTA	G G	intron_variant intron_variant	MODIFIER	HG02895.hp2 HG02895.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0009 a0001c0005t0009	a0001c0005t0009g0209 a0001c0005t0009g0209	1	246	0.0041	-10	c.104 others(29): Show c.1043+9450_1043+9459delGTGTGTGTAT	PGM5	ENSG00000154330.13	transcript	ENST00000396396.6	protein_coding	6/10		INFO_REALIGN_3_PRIME	chr9	TogoVar
PGM5_chr9_68351611_68536061	68401923	GTGTGTGT others(3): Show GTGTGTGTATA	G G	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02572.hp1 HG02622.hp2 others(1): Show HG02258.hp2 HG02572.hp1 HG02622.hp2 HG02922.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0005 a0001c0001t0009 a0001c0001t0002 a0001c0001t0005 a0001c0001t0009	a0001c0001t0002g0005 a0001c0001t0002g0070 a0001c0001t0005g0008 others(1): Show a0001c0001t0002g0005 a0001c0001t0002g0070 a0001c0001t0005g0008 a0001c0001t0009g0119	4	246	0.0163	-10	c.104 others(29): Show c.1043+9452_1043+9461delGTGTGTATAT	PGM5	ENSG00000154330.13	transcript	ENST00000396396.6	protein_coding	6/10		INFO_REALIGN_3_PRIME	chr9	TogoVar
PGM5_chr9_68351611_68536061	68406668	ATATATAT others(3): Show ATATATATATG	A A	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01175.hp1 HG02027.hp2 others(21): Show HG01109.hp2 HG01175.hp1 HG02027.hp2 HG02080.hp2 HG02135.hp2 HG02257.hp2 HG02258.hp2 HG02523.hp1 HG02572.hp1 HG02622.hp2 HG02647.hp2 HG02735.hp1 HG02922.hp1 HG02970.hp1 HG03225.hp2 NA18906.hp2 NA18944.hp1 NA18963.hp1 NA19030.hp1 NA19030.hp2 NA19056.hp1 NA19057.hp2 NA19063.hp1 NA20752.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0001c0002 a0001c0003 others(3): Show a0001c0001 a0001c0002 a0001c0003 a0001c0004 a0001c0017 a0005c0015	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(11): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0009 a0001c0001t0016 a0001c0001t0017 a0001c0002t0002 a0001c0002t0008 a0001c0003t0014 a0001c0004t0002 a0001c0004t0028 a0001c0017t0025 a0005c0015t0012	a0001c0001t0001g0109 a0001c0001t0001g0167 a0001c0001t0001g0197 others(21): Show a0001c0001t0001g0109 a0001c0001t0001g0167 a0001c0001t0001g0197 a0001c0001t0001g0206 a0001c0001t0002g0005 a0001c0001t0002g0070 a0001c0001t0002g0073 a0001c0001t0004g0124 a0001c0001t0005g0008 a0001c0001t0009g0119 a0001c0001t0016g0092 a0001c0001t0017g0106 a0001c0002t0002g0010 a0001c0002t0002g0041 a0001c0002t0002g0043 a0001c0002t0002g0051 a0001c0002t0002g0057 a0001c0002t0008g0034 a0001c0002t0008g0044 a0001c0003t0014g0017 a0001c0004t0002g0238 a0001c0004t0028g0236 a0001c0017t0025g0084 a0005c0015t0012g0122	24	246	0.0976	-10	c.104 others(31): Show c.1043+14205_1043+14214delGTATATATAT	PGM5	ENSG00000154330.13	transcript	ENST00000396396.6	protein_coding	6/10		INFO_REALIGN_3_PRIME	chr9	TogoVar
PGM5_chr9_68351611_68536061	68496979	CACGTGTA others(3): Show CACGTGTAGTG	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp1 HG01109.hp2 others(4): Show HG00099.hp2 HG00280.hp1 HG01109.hp2 HG01255.hp1 HG01258.hp1 HG02970.hp2 HG06807.hp2	a0001 a0001	a0001c0002 a0001c0004 a0001c0002 a0001c0004	a0001c0002t0002 a0001c0002t0026 a0001c0004t0002 a0001c0002t0002 a0001c0002t0026 a0001c0004t0002	a0001c0002t0002g0021 a0001c0002t0002g0022 a0001c0002t0002g0024 others(4): Show a0001c0002t0002g0021 a0001c0002t0002g0022 a0001c0002t0002g0024 a0001c0002t0002g0043 a0001c0002t0002g0064 a0001c0002t0026g0061 a0001c0004t0002g0243	7	246	0.0285	-10	c.148 others(29): Show c.1480-2245_1480-2236delGTGTAGTGAC	PGM5	ENSG00000154330.13	transcript	ENST00000396396.6	protein_coding	9/10		INFO_REALIGN_3_PRIME	chr9	TogoVar
PGM5_chr9_68351611_68536061	68529164	CGTGTGTG others(3): Show CGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02055.hp1 HG02257.hp2 others(2): Show HG01891.hp1 HG02055.hp1 HG02257.hp2 HG03471.hp2 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0017 a0001c0001t0022 a0001c0001t0017 a0001c0001t0022	a0001c0001t0017g0098 a0001c0001t0017g0106 a0001c0001t0017g0117 others(2): Show a0001c0001t0017g0098 a0001c0001t0017g0106 a0001c0001t0017g0117 a0001c0001t0022g0001 a0001c0001t0022g0002	5	246	0.0203	-10	c.161 others(27): Show c.1615-365_1615-356delTGTGTGTGTG	PGM5	ENSG00000154330.13	transcript	ENST00000396396.6	protein_coding	10/10		INFO_REALIGN_3_PRIME	chr9	TogoVar
PGPEP1L_chr15_98963229_99012792	98981503	AAAACAAA others(3): Show AAAACAAAAAC	A A	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG00597.hp1	a0000 a0000	a0000c0002 a0000c0002	a0000c0002t0026 a0000c0002t0026	a0000c0002t0026g0213 a0000c0002t0026g0213	1	398	0.0025	-10	c.-14 others(31): Show c.-141-10355_-141-10346delGTTTTTGTTT	PGPEP1L	ENSG00000183571.11	transcript	ENST00000535714.2	protein_coding	2/4			chr15	TogoVar
PGPEP1L_chr15_98963229_99012792	98982339	TATTCTTG others(3): Show TATTCTTGTGG	T T	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02145.hp2 HG02257.hp1 others(14): Show HG01243.hp1 HG02145.hp2 HG02257.hp1 HG02280.hp1 HG02451.hp1 HG02559.hp2 HG02572.hp2 HG02622.hp2 HG02818.hp2 HG02922.hp1 HG03098.hp1 HG03209.hp1 HG03225.hp2 HG03540.hp1 NA18906.hp1 NA19091.hp2 NA21309.hp1	a0000 a0001 a0000 a0001	a0000c0002 a0001c0001 a0000c0002 a0001c0001	a0000c0002t0001 a0001c0001t0001 a0001c0001t0003 others(5): Show a0000c0002t0001 a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0006 a0001c0001t0010 a0001c0001t0013 a0001c0001t0029	a0000c0002t0001g0103 a0001c0001t0001g0002 a0001c0001t0001g0047 others(13): Show a0000c0002t0001g0103 a0001c0001t0001g0002 a0001c0001t0001g0047 a0001c0001t0001g0173 a0001c0001t0003g0238 a0001c0001t0005g0372 a0001c0001t0005g0374 a0001c0001t0005g0375 a0001c0001t0006g0248 a0001c0001t0006g0254 a0001c0001t0006g0256 a0001c0001t0006g0257 a0001c0001t0010g0246 a0001c0001t0013g0009 a0001c0001t0013g0010 a0001c0001t0029g0216	17	398	0.0427	-10	c.-14 others(31): Show c.-141-11191_-141-11182delCCACAAGAAT	PGPEP1L	ENSG00000183571.11	transcript	ENST00000535714.2	protein_coding	2/4			chr15	TogoVar
PGPEP1L_chr15_98963229_99012792	98982699	GCTTTTTT others(3): Show GCTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00735.hp1 HG00741.hp2 others(20): Show HG00323.hp2 HG00735.hp1 HG00741.hp2 HG02280.hp2 HG02486.hp1 HG02615.hp1 HG02647.hp1 HG02895.hp1 HG02922.hp2 HG02970.hp2 HG02976.hp1 HG03130.hp1 HG03130.hp2 HG03209.hp2 HG03486.hp2 HG03579.hp2 HG06807.hp2 NA18906.hp2 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19240.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0001 a0001c0001t0002 a0001c0001t0003	a0001c0001t0001g0057 a0001c0001t0001g0059 a0001c0001t0001g0183 others(20): Show a0001c0001t0001g0057 a0001c0001t0001g0059 a0001c0001t0001g0183 a0001c0001t0001g0185 a0001c0001t0002g0263 a0001c0001t0002g0264 a0001c0001t0003g0222 a0001c0001t0003g0224 a0001c0001t0003g0225 a0001c0001t0003g0226 a0001c0001t0003g0227 a0001c0001t0003g0228 a0001c0001t0003g0229 a0001c0001t0003g0231 a0001c0001t0003g0232 a0001c0001t0003g0233 a0001c0001t0003g0234 a0001c0001t0003g0235 a0001c0001t0003g0236 a0001c0001t0003g0237 a0001c0001t0003g0239 a0001c0001t0003g0240 a0001c0001t0003g0241	23	398	0.0578	-10	c.-14 others(31): Show c.-141-11551_-141-11542delAAAAAAAAAG	PGPEP1L	ENSG00000183571.11	transcript	ENST00000535714.2	protein_coding	2/4			chr15	TogoVar
PGPEP1L_chr15_98963229_99012792	98982700	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA18955.hp1 NA18955.hp1	a0000 a0000	a0000c0002 a0000c0002	a0000c0002t0001 a0000c0002t0001	a0000c0002t0001g0100 a0000c0002t0001g0100	1	398	0.0025	-10	c.-14 others(31): Show c.-141-11552_-141-11543delAAAAAAAAAA	PGPEP1L	ENSG00000183571.11	transcript	ENST00000535714.2	protein_coding	2/4			chr15	TogoVar
PGR_chr11_101024624_101134813	101045665	TTGTGTGT others(3): Show TTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG02717.hp2 HG02895.hp2 others(1): Show HG00733.hp1 HG02717.hp2 HG02895.hp2 HG02922.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0022 a0001c0002t0026 a0001c0002t0022 a0001c0002t0026	a0001c0002t0022g0043 a0001c0002t0022g0055 a0001c0002t0026g0042 others(1): Show a0001c0002t0022g0043 a0001c0002t0022g0055 a0001c0002t0026g0042 a0001c0002t0026g0044	4	254	0.0158	-10	c.248 others(29): Show c.2489-3573_2489-3564delCACACACACA	PGR	ENSG00000082175.16	transcript	ENST00000325455.10	protein_coding	6/7			chr11	TogoVar
PGR_chr11_101024624_101134813	101046292	ATTTTTTT others(3): Show ATTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG00741.hp2 HG01069.hp2 others(16): Show HG00597.hp1 HG00741.hp2 HG01069.hp2 HG01106.hp2 HG02040.hp2 HG02155.hp2 HG02895.hp1 HG02897.hp1 HG02970.hp1 HG03195.hp1 HG03579.hp2 HG03669.hp2 NA18612.hp2 NA18953.hp2 NA18955.hp1 NA18965.hp1 NA18981.hp1 NA19043.hp2 NA19090.hp1	a0001 a0006 a0001 a0006	a0001c0002 a0006c0011 a0001c0002 a0006c0011	a0001c0002t0001 a0001c0002t0024 a0001c0002t0050 others(2): Show a0001c0002t0001 a0001c0002t0024 a0001c0002t0050 a0001c0002t0051 a0006c0011t0009	a0001c0002t0001g0109 a0001c0002t0001g0110 a0001c0002t0001g0115 others(16): Show a0001c0002t0001g0109 a0001c0002t0001g0110 a0001c0002t0001g0115 a0001c0002t0001g0117 a0001c0002t0001g0118 a0001c0002t0001g0119 a0001c0002t0001g0121 a0001c0002t0001g0124 a0001c0002t0001g0128 a0001c0002t0001g0131 a0001c0002t0001g0132 a0001c0002t0001g0134 a0001c0002t0001g0136 a0001c0002t0001g0139 a0001c0002t0001g0148 a0001c0002t0024g0129 a0001c0002t0050g0141 a0001c0002t0051g0135 a0006c0011t0009g0212	19	254	0.0748	-10	c.248 others(29): Show c.2488+3627_2488+3636delAAAAAAAAAA	PGR	ENSG00000082175.16	transcript	ENST00000325455.10	protein_coding	6/7			chr11	TogoVar
PGR_chr11_101024624_101134813	101052269	CTGTGTGT others(3): Show CTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00423.hp1 others(46): Show HG00099.hp1 HG00140.hp1 HG00423.hp1 HG00639.hp1 HG00733.hp1 HG00735.hp1 HG01081.hp1 HG01109.hp2 HG01123.hp1 HG01243.hp1 HG01433.hp2 HG01515.hp2 HG01517.hp2 HG01934.hp1 HG01993.hp2 HG02109.hp1 HG02145.hp2 HG02280.hp1 HG02300.hp2 HG02572.hp1 HG02615.hp2 HG02647.hp2 HG02698.hp2 HG02717.hp1 HG02738.hp1 HG02895.hp2 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG03041.hp2 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp2 HG03195.hp2 HG03209.hp1 HG03225.hp2 HG03239.hp2 HG03453.hp2 HG03486.hp1 HG03490.hp2 HG03654.hp1 HG03669.hp2 HG03710.hp2 HG04199.hp2 HG06807.hp2 NA18522.hp1 NA19240.hp2 NA20805.hp2	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0004 a0006 a0007 a0010	a0001c0001 a0001c0002 a0001c0003 others(8): Show a0001c0001 a0001c0002 a0001c0003 a0001c0024 a0002c0004 a0002c0016 a0003c0005 a0004c0018 a0006c0010 a0007c0023 a0010c0013	a0001c0001t0004 a0001c0001t0007 a0001c0001t0010 others(24): Show a0001c0001t0004 a0001c0001t0007 a0001c0001t0010 a0001c0001t0014 a0001c0001t0034 a0001c0001t0078 a0001c0001t0082 a0001c0001t0085 a0001c0001t0086 a0001c0001t0089 a0001c0001t0090 a0001c0002t0001 a0001c0002t0022 a0001c0002t0026 a0001c0003t0014 a0001c0024t0077 a0002c0004t0005 a0002c0004t0015 a0002c0004t0021 a0002c0004t0045 a0002c0016t0005 a0003c0005t0006 a0003c0005t0053 a0004c0018t0042 a0006c0010t0004 a0007c0023t0005 a0010c0013t0015	a0001c0001t0004g0218 a0001c0001t0004g0221 a0001c0001t0004g0225 others(46): Show a0001c0001t0004g0218 a0001c0001t0004g0221 a0001c0001t0004g0225 a0001c0001t0004g0230 a0001c0001t0004g0234 a0001c0001t0004g0236 a0001c0001t0004g0237 a0001c0001t0004g0238 a0001c0001t0004g0239 a0001c0001t0007g0049 a0001c0001t0007g0054 a0001c0001t0010g0222 a0001c0001t0010g0223 a0001c0001t0010g0250 a0001c0001t0010g0251 a0001c0001t0014g0047 a0001c0001t0014g0050 a0001c0001t0014g0053 a0001c0001t0034g0005 a0001c0001t0078g0046 a0001c0001t0082g0107 a0001c0001t0085g0231 a0001c0001t0086g0226 a0001c0001t0089g0235 a0001c0001t0090g0233 a0001c0002t0001g0124 a0001c0002t0022g0043 a0001c0002t0022g0055 a0001c0002t0026g0042 a0001c0003t0014g0206 a0001c0024t0077g0210 a0002c0004t0005g0033 a0002c0004t0015g0021 a0002c0004t0015g0022 a0002c0004t0021g0036 a0002c0004t0021g0037 a0002c0004t0045g0035 a0002c0016t0005g0030 a0003c0005t0006g0157 a0003c0005t0006g0161 a0003c0005t0006g0162 a0003c0005t0006g0163 a0003c0005t0006g0164 a0003c0005t0006g0165 a0003c0005t0053g0166 a0004c0018t0042g0039 a0006c0010t0004g0213 a0007c0023t0005g0209 a0010c0013t0015g0020	49	254	0.1929	-10	c.221 others(27): Show c.2213-711_2213-702delCACACACACA	PGR	ENSG00000082175.16	transcript	ENST00000325455.10	protein_coding	4/7			chr11	TogoVar
PGR_chr11_101024624_101134813	101076919	ATTTTTTT others(3): Show ATTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00597.hp2 HG00642.hp2 others(50): Show HG00423.hp2 HG00597.hp2 HG00642.hp2 HG01109.hp2 HG01123.hp2 HG01167.hp1 HG01168.hp2 HG01192.hp1 HG01255.hp2 HG01346.hp2 HG01891.hp1 HG01981.hp1 HG02015.hp2 HG02155.hp1 HG02165.hp2 HG02258.hp2 HG02273.hp1 HG02572.hp2 HG02615.hp1 HG02735.hp2 HG02818.hp2 HG02970.hp2 HG02976.hp2 HG03139.hp1 HG03492.hp2 HG03654.hp2 HG03669.hp1 HG03688.hp2 HG04115.hp1 HG04184.hp2 HG04199.hp1 NA18522.hp2 NA18612.hp1 NA18947.hp1 NA18949.hp1 NA18955.hp2 NA18959.hp1 NA18960.hp2 NA18961.hp1 NA18965.hp2 NA18971.hp2 NA18974.hp1 NA18974.hp2 NA18977.hp1 NA18981.hp2 NA18982.hp1 NA18984.hp1 NA19009.hp1 NA19060.hp1 NA19060.hp2 NA19085.hp1 NA19090.hp2 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0007 others(1): Show a0001c0001 a0001c0002 a0001c0007 a0001c0019	a0001c0001t0003 a0001c0001t0008 a0001c0001t0012 others(18): Show a0001c0001t0003 a0001c0001t0008 a0001c0001t0012 a0001c0001t0013 a0001c0001t0017 a0001c0001t0029 a0001c0001t0030 a0001c0001t0033 a0001c0001t0034 a0001c0001t0035 a0001c0001t0066 a0001c0001t0072 a0001c0001t0073 a0001c0001t0074 a0001c0001t0076 a0001c0001t0087 a0001c0002t0046 a0001c0002t0048 a0001c0002t0049 a0001c0007t0003 a0001c0019t0075	a0001c0001t0003g0057 a0001c0001t0003g0065 a0001c0001t0003g0066 others(50): Show a0001c0001t0003g0057 a0001c0001t0003g0065 a0001c0001t0003g0066 a0001c0001t0003g0067 a0001c0001t0003g0068 a0001c0001t0003g0070 a0001c0001t0003g0072 a0001c0001t0003g0076 a0001c0001t0003g0087 a0001c0001t0003g0088 a0001c0001t0003g0091 a0001c0001t0003g0093 a0001c0001t0003g0095 a0001c0001t0003g0097 a0001c0001t0003g0098 a0001c0001t0003g0103 a0001c0001t0003g0105 a0001c0001t0003g0106 a0001c0001t0008g0041 a0001c0001t0008g0063 a0001c0001t0008g0075 a0001c0001t0008g0081 a0001c0001t0008g0092 a0001c0001t0012g0082 a0001c0001t0012g0085 a0001c0001t0012g0153 a0001c0001t0013g0074 a0001c0001t0013g0084 a0001c0001t0013g0089 a0001c0001t0013g0090 a0001c0001t0017g0078 a0001c0001t0017g0083 a0001c0001t0017g0094 a0001c0001t0029g0062 a0001c0001t0029g0104 a0001c0001t0030g0099 a0001c0001t0030g0100 a0001c0001t0033g0003 a0001c0001t0034g0005 a0001c0001t0035g0004 a0001c0001t0066g0077 a0001c0001t0072g0061 a0001c0001t0073g0086 a0001c0001t0074g0102 a0001c0001t0076g0064 a0001c0001t0087g0240 a0001c0002t0046g0101 a0001c0002t0048g0079 a0001c0002t0049g0080 a0001c0007t0003g0069 a0001c0007t0003g0096 a0001c0007t0003g0152 a0001c0019t0075g0156	53	254	0.2087	-10	c.190 others(31): Show c.1907-14177_1907-14168delAAAAAAAAAA	PGR	ENSG00000082175.16	transcript	ENST00000325455.10	protein_coding	3/7			chr11	TogoVar
PGS1_chr17_78373649_78429659	78377392	CATATCAG others(3): Show CATATCAGGAG	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19072.hp1 NA19072.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0266 a0001c0001t0001g0266	1	398	0.0025	-10	c.-12 others(21): Show c.-1273_-1264delATATCAGGAG	PGS1	ENSG00000087157.19	transcript	ENST00000262764.11	protein_coding		1256		chr17	TogoVar
PGS1_chr17_78373649_78429659	78402397	CATATATA others(3): Show CATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00544.hp2 HG00558.hp2 others(71): Show HG00408.hp1 HG00544.hp2 HG00558.hp2 HG00609.hp2 HG00733.hp2 HG00738.hp1 HG01069.hp2 HG01081.hp1 HG01099.hp2 HG01123.hp1 HG01243.hp2 HG01256.hp2 HG01257.hp1 HG01258.hp1 HG01258.hp2 HG01496.hp1 HG01934.hp1 HG01943.hp1 HG01975.hp2 HG01993.hp1 HG02015.hp1 HG02015.hp2 HG02083.hp1 HG02083.hp2 HG02129.hp2 HG02148.hp2 HG02165.hp1 HG02273.hp2 HG02300.hp1 HG02523.hp2 HG02698.hp1 HG02717.hp1 HG03239.hp1 HG03491.hp2 HG03492.hp1 HG03831.hp1 HG03831.hp2 HG04199.hp1 HG04228.hp1 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18940.hp2 NA18941.hp2 NA18944.hp2 NA18952.hp1 NA18952.hp2 NA18953.hp2 NA18959.hp1 NA18971.hp1 NA18975.hp1 NA18977.hp1 NA18977.hp2 NA18980.hp2 NA18982.hp1 NA18984.hp2 NA18985.hp2 NA18997.hp2 NA18998.hp2 NA19002.hp2 NA19003.hp2 NA19007.hp2 NA19011.hp2 NA19012.hp2 NA19056.hp1 NA19057.hp1 NA19063.hp1 NA19063.hp2 NA19067.hp1 NA19084.hp2 NA19088.hp1 NA19090.hp1 NA20805.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0002 a0001c0002t0001 a0001c0002t0002	a0001c0002t0001g0004 a0001c0002t0001g0005 a0001c0002t0001g0017 others(68): Show a0001c0002t0001g0004 a0001c0002t0001g0005 a0001c0002t0001g0017 a0001c0002t0001g0018 a0001c0002t0001g0019 a0001c0002t0001g0020 a0001c0002t0001g0021 a0001c0002t0001g0022 a0001c0002t0001g0023 a0001c0002t0001g0025 a0001c0002t0001g0026 a0001c0002t0001g0027 a0001c0002t0001g0028 a0001c0002t0001g0029 a0001c0002t0001g0030 a0001c0002t0001g0031 a0001c0002t0001g0032 a0001c0002t0001g0033 a0001c0002t0001g0034 a0001c0002t0001g0035 a0001c0002t0001g0036 a0001c0002t0001g0037 a0001c0002t0001g0038 a0001c0002t0001g0039 a0001c0002t0001g0040 a0001c0002t0001g0041 a0001c0002t0001g0042 a0001c0002t0001g0043 a0001c0002t0001g0045 a0001c0002t0001g0046 a0001c0002t0001g0047 a0001c0002t0001g0048 a0001c0002t0001g0049 a0001c0002t0001g0050 a0001c0002t0001g0051 a0001c0002t0001g0052 a0001c0002t0001g0053 a0001c0002t0001g0054 a0001c0002t0001g0055 a0001c0002t0001g0056 a0001c0002t0001g0057 a0001c0002t0001g0058 a0001c0002t0001g0059 a0001c0002t0001g0060 a0001c0002t0001g0061 a0001c0002t0001g0062 a0001c0002t0001g0063 a0001c0002t0001g0066 a0001c0002t0001g0174 a0001c0002t0001g0197 a0001c0002t0001g0198 a0001c0002t0001g0207 a0001c0002t0001g0208 a0001c0002t0001g0211 a0001c0002t0001g0218 a0001c0002t0001g0329 a0001c0002t0002g0044 a0001c0002t0002g0068 a0001c0002t0002g0078 a0001c0002t0002g0080 a0001c0002t0002g0199 a0001c0002t0002g0200 a0001c0002t0002g0201 a0001c0002t0002g0202 a0001c0002t0002g0203 a0001c0002t0002g0204 a0001c0002t0002g0205 a0001c0002t0002g0206 a0001c0002t0002g0209 a0001c0002t0002g0210 a0001c0002t0002g0269	74	398	0.1859	-10	c.881 others(27): Show c.881-1149_881-1140delTATATATATA	PGS1	ENSG00000087157.19	transcript	ENST00000262764.11	protein_coding	6/9		INFO_REALIGN_3_PRIME	chr17	TogoVar
PGS1_chr17_78373649_78429659	78402419	TATATATA others(3): Show TATATATATAC	T T	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG02723.hp1 HG02965.hp1 others(5): Show HG01175.hp1 HG02723.hp1 HG02965.hp1 HG03041.hp2 HG03195.hp1 HG03209.hp1 NA19030.hp2 NA20300.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0140 a0001c0002t0001g0157 a0001c0002t0001g0158 others(5): Show a0001c0002t0001g0140 a0001c0002t0001g0157 a0001c0002t0001g0158 a0001c0002t0001g0159 a0001c0002t0001g0160 a0001c0002t0001g0161 a0001c0002t0001g0162 a0001c0002t0001g0167	8	398	0.0201	-10	c.881 others(27): Show c.881-1147_881-1138delTATATATACA	PGS1	ENSG00000087157.19	transcript	ENST00000262764.11	protein_coding	6/9		INFO_REALIGN_3_PRIME	chr17	TogoVar
PGS1_chr17_78373649_78429659	78410462	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02258.hp1 HG02723.hp1 others(11): Show HG01243.hp1 HG02258.hp1 HG02723.hp1 HG02818.hp1 HG02922.hp1 HG03041.hp2 HG03195.hp1 HG03209.hp2 HG03453.hp2 NA18612.hp1 NA18998.hp2 NA19043.hp2 NA19077.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 others(2): Show a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 a0001c0002t0005 a0001c0003t0002	a0001c0001t0001g0276 a0001c0001t0001g0346 a0001c0001t0001g0347 others(11): Show a0001c0001t0001g0276 a0001c0001t0001g0346 a0001c0001t0001g0347 a0001c0001t0001g0376 a0001c0001t0003g0341 a0001c0002t0001g0017 a0001c0002t0001g0018 a0001c0002t0001g0157 a0001c0002t0001g0158 a0001c0002t0001g0162 a0001c0002t0005g0075 a0001c0002t0005g0082 a0001c0003t0002g0177 a0001c0003t0002g0178	14	398	0.0352	-10	c.140 others(29): Show c.1403-4397_1403-4388delTTTTTTTTTT	PGS1	ENSG00000087157.19	transcript	ENST00000262764.11	protein_coding	7/9		INFO_REALIGN_3_PRIME	chr17	TogoVar
PGS1_chr17_78373649_78429659	78425756	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0342 a0001c0001t0005g0342	1	398	0.0025	-10	c.17 others(21): Show c.1707_*1716delTTTTTTTTTT	PGS1	ENSG00000087157.19	transcript	ENST00000262764.11	protein_coding		1098		chr17	TogoVar
PHACTR1_chr6_12711767_13292837	12712497	AAGAGAGA others(3): Show AAGAGAGAGAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	108	0.0093	-10	c.-46 others(21): Show c.-4680_-4671delAGAGAGAGAG	PHACTR1	ENSG00000112137.19	transcript	ENST00000332995.12	protein_coding		4269		chr6	TogoVar
PHACTR1_chr6_12711767_13292837	12780249	CTGTGTGT others(3): Show CTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG01168.hp1 HG01993.hp2 HG02965.hp1 others(2): Show HG01168.hp1 HG01993.hp2 HG02965.hp1 HG03139.hp2 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0001 a0001c0001t0002 a0001c0001t0005	a0001c0001t0001g0025 a0001c0001t0001g0082 a0001c0001t0002g0022 others(2): Show a0001c0001t0001g0025 a0001c0001t0001g0082 a0001c0001t0002g0022 a0001c0001t0002g0024 a0001c0001t0005g0064	5	108	0.0463	-10	c.250 others(29): Show c.250+30489_250+30498delGTGTGTGTGT	PHACTR1	ENSG00000112137.19	transcript	ENST00000332995.12	protein_coding	4/14		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR1_chr6_12711767_13292837	12792855	TTTTGGAA others(3): Show TTTTGGAATAA	T T	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	108	0.0093	-10	c.250 others(29): Show c.250+43067_250+43076delTTGGAATAAT	PHACTR1	ENSG00000112137.19	transcript	ENST00000332995.12	protein_coding	4/14		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR1_chr6_12711767_13292837	12880862	AGGCAAGC others(3): Show AGGCAAGCTGT	A A	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG01433.hp1 HG01496.hp2 others(23): Show HG01192.hp2 HG01433.hp1 HG01496.hp2 HG02109.hp1 HG02280.hp2 HG02486.hp1 HG02572.hp1 HG02647.hp1 HG02717.hp2 HG02723.hp1 HG02723.hp2 HG02818.hp2 HG02896.hp2 HG02965.hp2 HG03098.hp1 HG03130.hp2 HG03225.hp2 HG03486.hp1 HG03516.hp1 HG03540.hp2 HG03831.hp1 HG06807.hp2 NA18522.hp1 NA18955.hp1 NA19240.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0007 a0001c0002t0001 a0001c0002t0004 a0001c0003t0001	a0001c0001t0001g0011 a0001c0001t0001g0017 a0001c0001t0001g0038 others(23): Show a0001c0001t0001g0011 a0001c0001t0001g0017 a0001c0001t0001g0038 a0001c0001t0001g0046 a0001c0001t0001g0061 a0001c0001t0001g0070 a0001c0001t0001g0084 a0001c0001t0001g0088 a0001c0001t0001g0094 a0001c0001t0002g0007 a0001c0001t0002g0009 a0001c0001t0002g0012 a0001c0001t0002g0028 a0001c0001t0002g0040 a0001c0001t0002g0047 a0001c0001t0002g0052 a0001c0001t0002g0056 a0001c0001t0002g0085 a0001c0001t0002g0089 a0001c0001t0003g0010 a0001c0001t0003g0044 a0001c0001t0006g0053 a0001c0001t0007g0067 a0001c0002t0001g0013 a0001c0002t0004g0108 a0001c0003t0001g0054	26	108	0.2407	-10	c.250 others(31): Show c.250+131076_250+131085delAAGCTGTGGC	PHACTR1	ENSG00000112137.19	transcript	ENST00000332995.12	protein_coding	4/14		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR1_chr6_12711767_13292837	12883985	CATACACA others(3): Show CATACACAAAT	C C	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0058 a0001c0001t0001g0058	1	108	0.0093	-10	c.250 others(31): Show c.250+134203_250+134212delAATATACACA	PHACTR1	ENSG00000112137.19	transcript	ENST00000332995.12	protein_coding	4/14		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR1_chr6_12711767_13292837	12959191	AAAAAGAA others(3): Show AAAAAGAAAAG	A A	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0067 a0001c0001t0007g0067	1	108	0.0093	-10	c.251 others(29): Show c.251-94169_251-94160delGAAAAGAAAA	PHACTR1	ENSG00000112137.19	transcript	ENST00000332995.12	protein_coding	4/14		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR1_chr6_12711767_13292837	13003955	ATATATAT others(3): Show ATATATATATG	A A	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG02055.hp1 HG01255.hp1 HG02055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0016 a0001c0001t0001g0058 a0001c0001t0001g0016 a0001c0001t0001g0058	2	108	0.0185	-10	c.251 others(29): Show c.251-49400_251-49391delGTATATATAT	PHACTR1	ENSG00000112137.19	transcript	ENST00000332995.12	protein_coding	4/14		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR1_chr6_12711767_13292837	13038488	TAAAAAAA others(3): Show TAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0058 a0001c0001t0001g0058	1	108	0.0093	-10	c.251 others(29): Show c.251-14867_251-14858delAAAAAAAAAA	PHACTR1	ENSG00000112137.19	transcript	ENST00000332995.12	protein_coding	4/14		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR1_chr6_12711767_13292837	13041339	TACACACA others(3): Show TACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG01496.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0085 a0001c0001t0002g0085	1	108	0.0093	-10	c.251 others(29): Show c.251-11994_251-11985delCACACACACA	PHACTR1	ENSG00000112137.19	transcript	ENST00000332995.12	protein_coding	4/14		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR1_chr6_12711767_13292837	13059458	TCACACAC others(3): Show TCACACACACA	T T	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01167.hp1 HG01168.hp2 others(6): Show HG01109.hp2 HG01167.hp1 HG01168.hp2 HG01192.hp1 HG02280.hp2 HG02300.hp2 HG02717.hp1 HG03486.hp1 HG03831.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0001 a0001c0001t0002 a0001c0001t0003	a0001c0001t0001g0063 a0001c0001t0002g0012 a0001c0001t0002g0047 others(6): Show a0001c0001t0001g0063 a0001c0001t0002g0012 a0001c0001t0002g0047 a0001c0001t0002g0093 a0001c0001t0003g0044 a0001c0001t0003g0080 a0001c0001t0003g0096 a0001c0001t0003g0103 a0001c0001t0003g0104	9	108	0.0833	-10	c.415 others(27): Show c.415+5956_415+5965delCACACACACA	PHACTR1	ENSG00000112137.19	transcript	ENST00000332995.12	protein_coding	5/14		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR1_chr6_12711767_13292837	13064596	ATATATAT others(3): Show ATATATATATC	A A	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02258.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0031 a0001c0002t0001g0031	1	108	0.0093	-10	c.415 others(29): Show c.415+11075_415+11084delATCTATATAT	PHACTR1	ENSG00000112137.19	transcript	ENST00000332995.12	protein_coding	5/14		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR1_chr6_12711767_13292837	13064604	ATCTATAT others(3): Show ATCTATATATC	A A	intron_variant intron_variant	MODIFIER	HG01361.hp1 HG03516.hp1 NA20805.hp2 HG01361.hp1 HG03516.hp1 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0007 a0001c0001t0002 a0001c0001t0007	a0001c0001t0002g0081 a0001c0001t0002g0102 a0001c0001t0007g0067 a0001c0001t0002g0081 a0001c0001t0002g0102 a0001c0001t0007g0067	3	108	0.0278	-10	c.415 others(29): Show c.415+11077_415+11086delCTATATATCT	PHACTR1	ENSG00000112137.19	transcript	ENST00000332995.12	protein_coding	5/14		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR1_chr6_12711767_13292837	13134795	TAAAAAAA others(3): Show TAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01361.hp2 HG03139.hp1 others(2): Show HG01167.hp2 HG01361.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0025 a0001c0001t0001g0032 a0001c0001t0001g0100 others(2): Show a0001c0001t0001g0025 a0001c0001t0001g0032 a0001c0001t0001g0100 a0001c0001t0002g0005 a0001c0001t0002g0055	5	108	0.0463	-10	c.416 others(29): Show c.416-25391_416-25382delAAAAAAAAAA	PHACTR1	ENSG00000112137.19	transcript	ENST00000332995.12	protein_coding	5/14		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR1_chr6_12711767_13292837	13177172	TAAAAAAA others(3): Show TAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG01168.hp2 HG01168.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0096 a0001c0001t0003g0096	1	108	0.0093	-10	c.497 others(27): Show c.497-5325_497-5316delAAAAAAAAAA	PHACTR1	ENSG00000112137.19	transcript	ENST00000332995.12	protein_coding	6/14		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR1_chr6_12711767_13292837	13179405	CGTGTGTG others(3): Show CGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0011	1	108	0.0093	-10	c.497 others(27): Show c.497-3083_497-3074delGTGTGTGTGT	PHACTR1	ENSG00000112137.19	transcript	ENST00000332995.12	protein_coding	6/14		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR1_chr6_12711767_13292837	13218853	AAAGAGAA others(3): Show AAAGAGAAGAG	A A	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0062 a0001c0001t0001g0062	1	108	0.0093	-10	c.987 others(27): Show c.987-8910_987-8901delGAGAAGAGAA	PHACTR1	ENSG00000112137.19	transcript	ENST00000332995.12	protein_coding	8/14		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR1_chr6_12711767_13292837	13284537	AAAAAAAA others(3): Show AAAAAAAATAT	A A	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00735.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0060 a0001c0001t0002g0060	1	108	0.0093	-10	c.165 others(27): Show c.1650+977_1650+986delAAAAAATATA	PHACTR1	ENSG00000112137.19	transcript	ENST00000332995.12	protein_coding	13/14		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR1_chr6_12711767_13292837	13284539	AAAAAATA others(3): Show AAAAAATATAT	A A	intron_variant intron_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0005 a0001c0001t0002g0005	1	108	0.0093	-10	c.165 others(27): Show c.1650+979_1650+988delAAAATATATA	PHACTR1	ENSG00000112137.19	transcript	ENST00000332995.12	protein_coding	13/14		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR1_chr6_12711767_13292837	13288118	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02055.hp1 HG02809.hp1 HG03225.hp2 HG02055.hp1 HG02809.hp1 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0058 a0001c0001t0001g0094 a0001c0001t0004g0107 a0001c0001t0001g0058 a0001c0001t0001g0094 a0001c0001t0004g0107	3	108	0.0278	-10	c.10 others(21): Show c.1041_*1050delTTTTTTTTTT	PHACTR1	ENSG00000112137.19	transcript	ENST00000332995.12	protein_coding		282		chr6	TogoVar
PHACTR2_chr6_143672965_143836185	143736554	ATTTTTTT others(3): Show ATTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	NA18955.hp2 NA18955.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0065 a0001c0001t0065	a0001c0001t0065g0182 a0001c0001t0065g0182	1	310	0.0032	-10	c.215 others(29): Show c.215-12402_215-12393delTTTTTTTTTT	PHACTR2	ENSG00000112419.15	transcript	ENST00000440869.7	protein_coding	2/12		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR2_chr6_143672965_143836185	143757959	GCGCGCAC others(3): Show GCGCGCACACA	G G	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01123.hp2 HG02622.hp2 others(3): Show HG01099.hp1 HG01123.hp2 HG02622.hp2 HG02886.hp1 HG03098.hp1 HG03225.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0002 a0001c0001 a0001c0003 a0002c0002	a0001c0001t0107 a0001c0003t0109 a0002c0002t0005 others(3): Show a0001c0001t0107 a0001c0003t0109 a0002c0002t0005 a0002c0002t0020 a0002c0002t0023 a0002c0002t0042	a0001c0001t0107g0012 a0001c0003t0109g0310 a0002c0002t0005g0271 others(3): Show a0001c0001t0107g0012 a0001c0003t0109g0310 a0002c0002t0005g0271 a0002c0002t0020g0144 a0002c0002t0023g0242 a0002c0002t0042g0245	6	310	0.0194	-10	c.455 others(27): Show c.455-2440_455-2431delGCGCACACAC	PHACTR2	ENSG00000112419.15	transcript	ENST00000440869.7	protein_coding	4/12		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR2_chr6_143672965_143836185	143771148	ATATATAT others(3): Show ATATATATATG	A A	intron_variant intron_variant	MODIFIER	HG01952.hp2 HG02148.hp2 HG01952.hp2 HG02148.hp2	a0001 a0009 a0001 a0009	a0001c0003 a0009c0007 a0001c0003 a0009c0007	a0001c0003t0024 a0009c0007t0024 a0001c0003t0024 a0009c0007t0024	a0001c0003t0024g0004 a0009c0007t0024g0114 a0001c0003t0024g0004 a0009c0007t0024g0114	2	310	0.0065	-10	c.123 others(29): Show c.1233-1100_1233-1091delGTATATATAT	PHACTR2	ENSG00000112419.15	transcript	ENST00000440869.7	protein_coding	6/12		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR2_chr6_143672965_143836185	143771184	ATATATGT others(3): Show ATATATGTGTG	A A	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG02273.hp1 HG02723.hp2 others(3): Show HG01192.hp2 HG02273.hp1 HG02723.hp2 HG04184.hp1 NA18956.hp1 NA18975.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0006 a0001c0001 a0004c0006	a0001c0001t0001 a0001c0001t0003 a0001c0001t0013 others(3): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0013 a0001c0001t0076 a0001c0001t0079 a0004c0006t0128	a0001c0001t0001g0225 a0001c0001t0003g0181 a0001c0001t0013g0230 others(3): Show a0001c0001t0001g0225 a0001c0001t0003g0181 a0001c0001t0013g0230 a0001c0001t0076g0098 a0001c0001t0079g0218 a0004c0006t0128g0259	6	310	0.0194	-10	c.123 others(29): Show c.1233-1068_1233-1059delGTGTGTATAT	PHACTR2	ENSG00000112419.15	transcript	ENST00000440869.7	protein_coding	6/12		INFO_REALIGN_3_PRIME	chr6	TogoVar
PHACTR2_chr6_143672965_143836185	143771194	GTATATAT others(3): Show GTATATATATA	G G	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02630.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0060 a0001c0001t0060	a0001c0001t0060g0033 a0001c0001t0060g0033	1	310	0.0032	-10	c.123 others(29): Show c.1233-1032_1233-1023delATATATATAT	PHACTR2	ENSG00000112419.15	transcript	ENST00000440869.7	protein_coding	6/12		INFO_REALIGN_3_PRIME	chr6	TogoVar

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