Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SCAF4_chr21_31666000_31737118	31717938	CACACACA others(3): Show CACACACACAT	C C	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02965.hp2 HG03130.hp2 others(2): Show HG02615.hp2 HG02965.hp2 HG03130.hp2 NA18522.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0127 a0001c0001t0001g0128 others(1): Show a0001c0001t0001g0003 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0130	5	352	0.0142	-10	c.31- others(27): Show c.31-11591_31-11582delATGTGTGTGT	SCAF4	ENSG00000156304.15	transcript	ENST00000286835.12	protein_coding	1/19			chr21	TogoVar
SCAF4_chr21_31666000_31737118	31735263	GAAAAAAA others(3): Show GAAAAAAAAAA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02615.hp2 HG02965.hp2 HG02976.hp1 others(3): Show HG02615.hp2 HG02965.hp2 HG02976.hp1 HG03130.hp2 NA18522.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0127 a0001c0001t0001g0128 others(2): Show a0001c0001t0001g0003 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130	6	352	0.0171	-10	c.-35 others(21): Show c.-3581_-3572delTTTTTTTTTT	SCAF4	ENSG00000156304.15	transcript	ENST00000286835.12	protein_coding		3146		chr21	TogoVar
SCAF8_chr6_154728416_154839221	154747896	CTGTGTGT others(3): Show CTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG02735.hp1 HG02735.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0001 a0002c0004t0001	a0002c0004t0001g0187 a0002c0004t0001g0187	1	282	0.0036	-10	c.30+ others(27): Show c.30+13998_30+14007delGTGTGTGTGT	SCAF8	ENSG00000213079.10	transcript	ENST00000367178.8	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr6	TogoVar
SCAF8_chr6_154728416_154839221	154767529	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(163): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00408.hp1 HG00408.hp2 HG00438.hp2 HG00544.hp2 HG00558.hp1 HG00558.hp2 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp1 HG00642.hp1 HG00673.hp1 HG00733.hp1 HG00735.hp1 HG00741.hp2 HG01070.hp1 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01106.hp1 HG01169.hp1 HG01192.hp1 HG01255.hp2 HG01256.hp2 HG01261.hp1 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01496.hp1 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01517.hp2 HG01891.hp1 HG01952.hp2 HG01975.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02015.hp1 HG02015.hp2 HG02040.hp2 HG02071.hp1 HG02071.hp2 HG02080.hp1 HG02109.hp1 HG02109.hp2 HG02129.hp2 HG02132.hp1 HG02135.hp1 HG02135.hp2 HG02145.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp1 HG02257.hp1 HG02257.hp2 HG02273.hp1 HG02293.hp2 HG02300.hp2 HG02486.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp2 HG02630.hp2 HG02647.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02965.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03098.hp1 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03209.hp2 HG03225.hp2 HG03239.hp1 HG03453.hp2 HG03490.hp1 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp2 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03704.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp1 HG03942.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 NA18522.hp1 NA18522.hp2 NA18906.hp1 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18945.hp2 NA18946.hp1 NA18949.hp1 NA18949.hp2 NA18951.hp2 NA18960.hp1 NA18960.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18983.hp1 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18987.hp1 NA18987.hp2 NA18990.hp2 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18998.hp1 NA18998.hp2 NA19002.hp1 NA19002.hp2 NA19003.hp1 NA19030.hp1 NA19043.hp2 NA19054.hp1 NA19054.hp2 NA19056.hp2 NA19060.hp1 NA19062.hp1 NA19062.hp2 NA19065.hp2 NA19079.hp1 NA19088.hp1 NA19088.hp2 NA19090.hp1 NA19090.hp2 NA19091.hp1 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA21309.hp2	a0001 a0002 a0004 others(2): Show a0001 a0002 a0004 a0006 a0007	a0001c0001 a0001c0006 a0001c0011 others(5): Show a0001c0001 a0001c0006 a0001c0011 a0001c0015 a0002c0004 a0004c0007 a0006c0009 a0007c0010	a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 others(10): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0005 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0006t0001 a0001c0011t0001 a0001c0015t0001 a0002c0004t0001 a0004c0007t0001 a0006c0009t0001 a0007c0010t0001	a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 others(163): Show a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0113 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0145 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0185 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0198 a0001c0001t0001g0199 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0219 a0001c0001t0001g0222 a0001c0001t0001g0224 a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0001g0229 a0001c0001t0001g0230 a0001c0001t0001g0231 a0001c0001t0001g0232 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0235 a0001c0001t0001g0236 a0001c0001t0001g0237 a0001c0001t0001g0238 a0001c0001t0001g0239 a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0001g0242 a0001c0001t0001g0243 a0001c0001t0001g0244 a0001c0001t0001g0245 a0001c0001t0001g0246 a0001c0001t0001g0247 a0001c0001t0001g0248 a0001c0001t0001g0250 a0001c0001t0001g0251 a0001c0001t0001g0252 a0001c0001t0001g0258 a0001c0001t0001g0264 a0001c0001t0001g0265 a0001c0001t0001g0266 a0001c0001t0004g0197 a0001c0001t0004g0215 a0001c0001t0004g0218 a0001c0001t0004g0220 a0001c0001t0004g0221 a0001c0001t0004g0228 a0001c0001t0004g0249 a0001c0001t0005g0152 a0001c0001t0005g0196 a0001c0001t0005g0209 a0001c0001t0008g0156 a0001c0001t0009g0253 a0001c0001t0010g0088 a0001c0006t0001g0223 a0001c0006t0001g0254 a0001c0011t0001g0208 a0001c0015t0001g0114 a0002c0004t0001g0186 a0002c0004t0001g0187 a0002c0004t0001g0188 a0004c0007t0001g0144 a0004c0007t0001g0177 a0006c0009t0001g0128 a0007c0010t0001g0100	166	282	0.5887	-10	c.31- others(25): Show c.31-6442_31-6433delTTTTTTTTTT	SCAF8	ENSG00000213079.10	transcript	ENST00000367178.8	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr6	TogoVar
SCAF8_chr6_154728416_154839221	154770388	ACTCTCTC others(3): Show ACTCTCTCTCT	A A	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG01884.hp2 HG01891.hp2 others(11): Show HG01496.hp2 HG01884.hp2 HG01891.hp2 HG02055.hp1 HG02080.hp2 HG02258.hp1 HG02647.hp2 HG02965.hp2 HG03225.hp1 HG03471.hp1 HG03486.hp1 HG03579.hp2 HG06807.hp1 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0012 a0001c0001 a0001c0012	a0001c0001t0002 a0001c0012t0002 a0001c0001t0002 a0001c0012t0002	a0001c0001t0002g0073 a0001c0001t0002g0075 a0001c0001t0002g0076 others(11): Show a0001c0001t0002g0073 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0275 a0001c0001t0002g0276 a0001c0001t0002g0277 a0001c0001t0002g0278 a0001c0001t0002g0280 a0001c0001t0002g0281 a0001c0001t0002g0282 a0001c0012t0002g0279	14	282	0.0497	-10	c.31- others(25): Show c.31-3574_31-3565delCTCTCTCTCT	SCAF8	ENSG00000213079.10	transcript	ENST00000367178.8	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr6	TogoVar
SCAF8_chr6_154728416_154839221	154778769	ATGTGTGT others(3): Show ATGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG02132.hp2 HG02717.hp1 HG02132.hp2 HG02717.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0172 a0001c0001t0002g0021 a0001c0001t0001g0172 a0001c0001t0002g0021	2	282	0.0071	-10	c.159 others(25): Show c.159+756_159+765delGTGTGTGTGT	SCAF8	ENSG00000213079.10	transcript	ENST00000367178.8	protein_coding	3/19		INFO_REALIGN_3_PRIME	chr6	TogoVar
SCAF8_chr6_154728416_154839221	154779779	GTGTATAT others(3): Show GTGTATATATA	G G	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02055.hp2 HG02451.hp1 others(9): Show HG01884.hp1 HG02055.hp2 HG02451.hp1 HG02717.hp1 HG02717.hp2 HG02895.hp2 HG02897.hp1 HG03041.hp2 HG03471.hp2 HG03579.hp1 NA18906.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0096 a0001c0001t0001g0111 a0001c0001t0001g0172 others(9): Show a0001c0001t0001g0096 a0001c0001t0001g0111 a0001c0001t0001g0172 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0002g0200	12	282	0.0426	-10	c.159 others(27): Show c.159+1736_159+1745delGTATATATAT	SCAF8	ENSG00000213079.10	transcript	ENST00000367178.8	protein_coding	3/19		INFO_REALIGN_3_PRIME	chr6	TogoVar
SCAF8_chr6_154728416_154839221	154779781	GTATATAT others(3): Show GTATATATATA	G G	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG03195.hp2 HG03453.hp1 others(1): Show HG02886.hp1 HG03195.hp2 HG03453.hp1 NA20752.hp2	a0003 a0005 a0003 a0005	a0003c0003 a0005c0005 a0003c0003 a0005c0005	a0003c0003t0002 a0005c0005t0002 a0003c0003t0002 a0005c0005t0002	a0003c0003t0002g0273 a0003c0003t0002g0274 a0005c0005t0002g0255 others(1): Show a0003c0003t0002g0273 a0003c0003t0002g0274 a0005c0005t0002g0255 a0005c0005t0002g0256	4	282	0.0142	-10	c.159 others(27): Show c.159+1747_159+1756delTATATATATA	SCAF8	ENSG00000213079.10	transcript	ENST00000367178.8	protein_coding	3/19		INFO_REALIGN_3_PRIME	chr6	TogoVar
SCAF8_chr6_154728416_154839221	154784120	GATATATA others(3): Show GATATATATAT	G G	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG01074.hp1 HG01256.hp2 others(2): Show HG00099.hp2 HG01074.hp1 HG01256.hp2 HG01496.hp1 HG03710.hp2	a0001 a0001	a0001c0001 a0001c0013 a0001c0001 a0001c0013	a0001c0001t0001 a0001c0013t0002 a0001c0001t0001 a0001c0013t0002	a0001c0001t0001g0103 a0001c0001t0001g0162 a0001c0001t0001g0164 others(2): Show a0001c0001t0001g0103 a0001c0001t0001g0162 a0001c0001t0001g0164 a0001c0001t0001g0201 a0001c0013t0002g0106	5	282	0.0177	-10	c.160 others(27): Show c.160-3712_160-3703delATATATATAT	SCAF8	ENSG00000213079.10	transcript	ENST00000367178.8	protein_coding	3/19		INFO_REALIGN_3_PRIME	chr6	TogoVar
SCAF8_chr6_154728416_154839221	154784149	ATATATAT others(3): Show ATATATATATT	A A	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02615.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0115 a0001c0001t0001g0115	1	282	0.0036	-10	c.160 others(27): Show c.160-3708_160-3699delATATATTTAT	SCAF8	ENSG00000213079.10	transcript	ENST00000367178.8	protein_coding	3/19		INFO_REALIGN_3_PRIME	chr6	TogoVar
SCAF8_chr6_154728416_154839221	154790489	ATTTTTTT others(3): Show ATTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00438.hp2 HG00544.hp2 others(20): Show HG00408.hp2 HG00438.hp2 HG00544.hp2 HG01358.hp1 HG02004.hp1 HG02040.hp2 HG02135.hp1 HG02273.hp1 HG02602.hp2 HG02615.hp2 HG02738.hp1 HG02922.hp1 HG03098.hp1 HG03516.hp1 HG03669.hp2 NA18993.hp1 NA18993.hp2 NA18994.hp1 NA18998.hp1 NA19003.hp1 NA19054.hp2 NA19090.hp2 NA19091.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0006c0009 a0001c0001 a0006c0009	a0001c0001t0001 a0001c0001t0004 a0001c0001t0009 others(1): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0009 a0006c0009t0001	a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0089 others(20): Show a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0089 a0001c0001t0001g0093 a0001c0001t0001g0115 a0001c0001t0001g0139 a0001c0001t0001g0145 a0001c0001t0001g0170 a0001c0001t0001g0199 a0001c0001t0001g0207 a0001c0001t0001g0216 a0001c0001t0001g0222 a0001c0001t0001g0225 a0001c0001t0001g0230 a0001c0001t0001g0233 a0001c0001t0001g0243 a0001c0001t0001g0248 a0001c0001t0001g0258 a0001c0001t0001g0264 a0001c0001t0004g0215 a0001c0001t0004g0220 a0001c0001t0009g0253 a0006c0009t0001g0128	23	282	0.0816	-10	c.322 others(27): Show c.322-2304_322-2295delTTTTTTTTTT	SCAF8	ENSG00000213079.10	transcript	ENST00000367178.8	protein_coding	4/19		INFO_REALIGN_3_PRIME	chr6	TogoVar
SCAF8_chr6_154728416_154839221	154794772	GTGTGGGG others(3): Show GTGTGGGGGGT	G G	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG02258.hp1 HG03942.hp1 HG00558.hp2 HG02258.hp1 HG03942.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0001 a0001c0001t0002 a0001c0001t0005	a0001c0001t0001g0129 a0001c0001t0002g0075 a0001c0001t0005g0196 a0001c0001t0001g0129 a0001c0001t0002g0075 a0001c0001t0005g0196	3	282	0.0106	-10	c.476 others(25): Show c.476-236_476-227delTGTGGGGGGT	SCAF8	ENSG00000213079.10	transcript	ENST00000367178.8	protein_coding	5/19			chr6	TogoVar
SCAF8_chr6_154728416_154839221	154794778	GGGGTGTG others(3): Show GGGGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02717.hp2 HG03139.hp2 others(2): Show HG02145.hp1 HG02717.hp2 HG03139.hp2 HG03579.hp1 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0004 a0001c0001 a0002c0004	a0001c0001t0001 a0001c0001t0002 a0002c0004t0001 a0001c0001t0001 a0001c0001t0002 a0002c0004t0001	a0001c0001t0001g0096 a0001c0001t0001g0182 a0001c0001t0001g0189 others(2): Show a0001c0001t0001g0096 a0001c0001t0001g0182 a0001c0001t0001g0189 a0001c0001t0002g0200 a0002c0004t0001g0186	5	282	0.0177	-10	c.476 others(25): Show c.476-229_476-220delGGTGTGTGTG	SCAF8	ENSG00000213079.10	transcript	ENST00000367178.8	protein_coding	5/19		INFO_REALIGN_3_PRIME	chr6	TogoVar
SCAF8_chr6_154728416_154839221	154794780	GGTGTGTG others(3): Show GGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG01978.hp1 HG01978.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0046 a0001c0002t0002g0046	1	282	0.0036	-10	c.476 others(25): Show c.476-188_476-179delGTGTGTGTGT	SCAF8	ENSG00000213079.10	transcript	ENST00000367178.8	protein_coding	5/19		INFO_REALIGN_3_PRIME	chr6	TogoVar
SCAF8_chr6_154728416_154839221	154831703	TAAAAAAA others(3): Show TAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00438.hp1 HG00642.hp2 others(58): Show HG00140.hp2 HG00438.hp1 HG00642.hp2 HG00673.hp2 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00741.hp1 HG01070.hp2 HG01081.hp2 HG01106.hp2 HG01109.hp2 HG01123.hp2 HG01167.hp2 HG01169.hp2 HG01192.hp2 HG01255.hp1 HG01256.hp1 HG01261.hp2 HG01928.hp1 HG01928.hp2 HG01952.hp1 HG01978.hp1 HG01981.hp2 HG02004.hp2 HG02040.hp1 HG02080.hp2 HG02132.hp2 HG02145.hp2 HG02148.hp1 HG02165.hp2 HG02258.hp1 HG02280.hp1 HG02293.hp2 HG02486.hp1 HG02647.hp2 HG02717.hp2 HG02738.hp2 HG02965.hp2 HG03471.hp1 HG03486.hp1 HG03579.hp2 HG03654.hp1 HG03669.hp1 HG03704.hp2 HG04228.hp2 HG06807.hp1 NA18945.hp1 NA18946.hp2 NA18951.hp1 NA18990.hp1 NA18994.hp2 NA19003.hp2 NA19060.hp2 NA19065.hp1 NA19079.hp2 NA19091.hp2 NA20300.hp2 NA20752.hp1 NA20752.hp2 homoSapiens_chm13v2.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0001c0002 a0001c0014 others(1): Show a0001c0001 a0001c0002 a0001c0014 a0005c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0002t0002 a0001c0014t0002 a0005c0005t0002	a0001c0001t0001g0138 a0001c0001t0001g0140 a0001c0001t0002g0001 others(58): Show a0001c0001t0001g0138 a0001c0001t0001g0140 a0001c0001t0002g0001 a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0008 a0001c0001t0002g0009 a0001c0001t0002g0010 a0001c0001t0002g0011 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0015 a0001c0001t0002g0016 a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0021 a0001c0001t0002g0022 a0001c0001t0002g0023 a0001c0001t0002g0025 a0001c0001t0002g0027 a0001c0001t0002g0028 a0001c0001t0002g0029 a0001c0001t0002g0031 a0001c0001t0002g0032 a0001c0001t0002g0033 a0001c0001t0002g0034 a0001c0001t0002g0035 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0047 a0001c0001t0002g0048 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0053 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0057 a0001c0001t0002g0059 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0073 a0001c0001t0002g0075 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0200 a0001c0001t0002g0276 a0001c0001t0002g0277 a0001c0001t0002g0278 a0001c0001t0002g0282 a0001c0001t0006g0019 a0001c0001t0006g0020 a0001c0002t0002g0043 a0001c0002t0002g0045 a0001c0002t0002g0046 a0001c0002t0002g0049 a0001c0014t0002g0052 a0005c0005t0002g0255	61	282	0.2163	-10	c.236 others(27): Show c.2360-206_2360-197delAAAAAAAAAA	SCAF8	ENSG00000213079.10	transcript	ENST00000367178.8	protein_coding	19/19		INFO_REALIGN_3_PRIME	chr6	TogoVar
SCAI_chr9_124937608_125148528	125004734	CATATATA others(3): Show CATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00741.hp2 HG01167.hp1 others(12): Show HG00639.hp1 HG00741.hp2 HG01167.hp1 HG01167.hp2 HG01243.hp1 HG02135.hp1 HG02258.hp1 HG02615.hp1 HG02895.hp1 HG03209.hp1 NA18955.hp2 NA19010.hp1 NA19055.hp1 NA19091.hp2 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0002 a0001c0001 a0001c0003 a0002c0002	a0001c0001t0010 a0001c0001t0021 a0001c0003t0004 others(9): Show a0001c0001t0010 a0001c0001t0021 a0001c0003t0004 a0001c0003t0012 a0001c0003t0019 a0001c0003t0024 a0001c0003t0030 a0001c0003t0054 a0001c0003t0063 a0001c0003t0068 a0001c0003t0070 a0002c0002t0006	a0001c0001t0010g0213 a0001c0001t0021g0045 a0001c0003t0004g0086 others(12): Show a0001c0001t0010g0213 a0001c0001t0021g0045 a0001c0003t0004g0086 a0001c0003t0004g0130 a0001c0003t0012g0204 a0001c0003t0012g0205 a0001c0003t0019g0118 a0001c0003t0024g0088 a0001c0003t0024g0089 a0001c0003t0030g0115 a0001c0003t0054g0131 a0001c0003t0063g0071 a0001c0003t0068g0067 a0001c0003t0070g0052 a0002c0002t0006g0258	15	306	0.0490	-10	c.862 others(27): Show c.862-1174_862-1165delATATATATAT	SCAI	ENSG00000173611.18	transcript	ENST00000336505.11	protein_coding	9/17			chr9	TogoVar
SCAI_chr9_124937608_125148528	125004771	ATATATAT others(3): Show ATATATATATT	A A	intron_variant intron_variant	MODIFIER	NA19043.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0056 a0001c0001t0056	a0001c0001t0056g0206 a0001c0001t0056g0206	1	306	0.0033	-10	c.862 others(27): Show c.862-1211_862-1202delAATATATATA	SCAI	ENSG00000173611.18	transcript	ENST00000336505.11	protein_coding	9/17			chr9	TogoVar
SCAI_chr9_124937608_125148528	125091410	CTTTTTTG others(3): Show CTTTTTTGCTT	C C	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02451.hp2 HG02559.hp1 others(6): Show HG02145.hp2 HG02451.hp2 HG02559.hp1 HG02976.hp1 HG03139.hp2 HG03195.hp2 HG06807.hp1 NA18522.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0003 a0001c0001t0018 a0001c0001t0021 others(3): Show a0001c0001t0003 a0001c0001t0018 a0001c0001t0021 a0001c0001t0029 a0001c0001t0067 a0001c0003t0034	a0001c0001t0003g0185 a0001c0001t0018g0181 a0001c0001t0018g0187 others(6): Show a0001c0001t0003g0185 a0001c0001t0018g0181 a0001c0001t0018g0187 a0001c0001t0018g0188 a0001c0001t0021g0182 a0001c0001t0029g0183 a0001c0001t0029g0186 a0001c0001t0067g0199 a0001c0003t0034g0184	9	306	0.0294	-10	c.99- others(27): Show c.99-35413_99-35404delAAGCAAAAAA	SCAI	ENSG00000173611.18	transcript	ENST00000336505.11	protein_coding	2/17			chr9	TogoVar
SCAI_chr9_124937608_125148528	125092131	TAAAAAAA others(3): Show TAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG01123.hp2 HG01255.hp1 others(16): Show HG00438.hp2 HG01123.hp2 HG01255.hp1 HG01257.hp1 HG01361.hp1 HG01496.hp1 HG01993.hp2 HG02129.hp2 NA18939.hp2 NA18949.hp2 NA18966.hp2 NA18970.hp2 NA18989.hp2 NA19002.hp2 NA19003.hp1 NA19005.hp2 NA19007.hp1 NA19087.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0007 a0001c0001t0011 a0001c0001t0022 a0001c0001t0023 a0001c0001t0035 a0001c0001t0045 a0001c0007t0022	a0001c0001t0001g0300 a0001c0001t0002g0282 a0001c0001t0002g0287 others(16): Show a0001c0001t0001g0300 a0001c0001t0002g0282 a0001c0001t0002g0287 a0001c0001t0002g0289 a0001c0001t0005g0024 a0001c0001t0005g0283 a0001c0001t0005g0285 a0001c0001t0005g0291 a0001c0001t0005g0293 a0001c0001t0005g0297 a0001c0001t0005g0298 a0001c0001t0005g0299 a0001c0001t0007g0290 a0001c0001t0011g0288 a0001c0001t0022g0303 a0001c0001t0023g0305 a0001c0001t0035g0292 a0001c0001t0045g0295 a0001c0007t0022g0304	19	306	0.0621	-10	c.99- others(27): Show c.99-36134_99-36125delTTTTTTTTTT	SCAI	ENSG00000173611.18	transcript	ENST00000336505.11	protein_coding	2/17			chr9	TogoVar
SCAI_chr9_124937608_125148528	125106118	AAAAAATA others(3): Show AAAAAATATAT	A A	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0066 a0001c0001t0066	a0001c0001t0066g0132 a0001c0001t0066g0132	1	306	0.0033	-10	c.98+ others(27): Show c.98+36505_98+36514delATATATTTTT	SCAI	ENSG00000173611.18	transcript	ENST00000336505.11	protein_coding	2/17			chr9	TogoVar
SCAI_chr9_124937608_125148528	125106120	AAAATATA others(3): Show AAAATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02451.hp2 HG02886.hp1 others(5): Show HG02145.hp2 HG02451.hp2 HG02886.hp1 HG03139.hp2 HG03195.hp2 HG03225.hp2 HG06807.hp1 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 others(4): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0018 a0001c0001t0021 a0001c0001t0029 a0001c0001t0067	a0001c0001t0002g0125 a0001c0001t0003g0185 a0001c0001t0006g0122 others(5): Show a0001c0001t0002g0125 a0001c0001t0003g0185 a0001c0001t0006g0122 a0001c0001t0018g0187 a0001c0001t0021g0182 a0001c0001t0029g0183 a0001c0001t0029g0186 a0001c0001t0067g0199	8	306	0.0261	-10	c.98+ others(27): Show c.98+36503_98+36512delATATATATTT	SCAI	ENSG00000173611.18	transcript	ENST00000336505.11	protein_coding	2/17			chr9	TogoVar
SCAI_chr9_124937608_125148528	125106122	AATATATA others(3): Show AATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02976.hp1 HG02559.hp1 HG02976.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0018 a0001c0003t0034 a0001c0001t0018 a0001c0003t0034	a0001c0001t0018g0188 a0001c0003t0034g0184 a0001c0001t0018g0188 a0001c0003t0034g0184	2	306	0.0065	-10	c.98+ others(27): Show c.98+36501_98+36510delATATATATAT	SCAI	ENSG00000173611.18	transcript	ENST00000336505.11	protein_coding	2/17			chr9	TogoVar
SCAI_chr9_124937608_125148528	125122588	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01069.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0211 a0001c0001t0010g0211	1	306	0.0033	-10	c.98+ others(27): Show c.98+20035_98+20044delTTTTTTTTTT	SCAI	ENSG00000173611.18	transcript	ENST00000336505.11	protein_coding	2/17			chr9	TogoVar
SCAMP1_chr5_78355617_78485739	78382776	GGTGTGTG others(3): Show GGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	NA18962.hp1 NA18962.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0284 a0001c0001t0003g0284	1	332	0.0030	-10	c.58- others(25): Show c.58-6027_58-6018delTGTGTGTGTG	SCAMP1	ENSG00000085365.18	transcript	ENST00000621999.5	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr5	TogoVar
SCAMP1_chr5_78355617_78485739	78382810	TGTGTGTG others(3): Show TGTGTGTGTGC	T T	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00735.hp2 HG00738.hp2 others(42): Show HG00323.hp1 HG00735.hp2 HG00738.hp2 HG01074.hp2 HG01123.hp1 HG01168.hp2 HG01169.hp2 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01358.hp1 HG01358.hp2 HG01496.hp2 HG01515.hp2 HG01516.hp2 HG01981.hp2 HG02004.hp1 HG02109.hp1 HG02145.hp1 HG02148.hp2 HG02273.hp2 HG02486.hp1 HG02738.hp2 HG02896.hp2 HG02897.hp1 HG03225.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp2 HG03704.hp1 HG03710.hp2 HG03834.hp2 HG03942.hp1 HG03942.hp2 NA18612.hp1 NA18949.hp1 NA18993.hp1 NA18999.hp1 NA19001.hp2 NA19064.hp1 NA19088.hp2 NA19091.hp2 NA20805.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0004 a0001c0002t0009 others(6): Show a0001c0001t0002 a0001c0002t0004 a0001c0002t0009 a0001c0002t0011 a0001c0002t0012 a0001c0002t0013 a0001c0002t0016 a0001c0002t0032 a0001c0002t0034	a0001c0001t0002g0074 a0001c0001t0002g0086 a0001c0001t0002g0087 others(41): Show a0001c0001t0002g0074 a0001c0001t0002g0086 a0001c0001t0002g0087 a0001c0001t0002g0088 a0001c0001t0002g0089 a0001c0001t0002g0090 a0001c0001t0002g0091 a0001c0002t0004g0008 a0001c0002t0004g0011 a0001c0002t0004g0012 a0001c0002t0004g0013 a0001c0002t0004g0020 a0001c0002t0004g0023 a0001c0002t0004g0024 a0001c0002t0004g0025 a0001c0002t0004g0026 a0001c0002t0004g0027 a0001c0002t0004g0028 a0001c0002t0004g0030 a0001c0002t0004g0031 a0001c0002t0004g0032 a0001c0002t0004g0033 a0001c0002t0004g0034 a0001c0002t0004g0038 a0001c0002t0004g0039 a0001c0002t0004g0042 a0001c0002t0004g0056 a0001c0002t0004g0059 a0001c0002t0004g0060 a0001c0002t0009g0015 a0001c0002t0009g0029 a0001c0002t0009g0035 a0001c0002t0009g0054 a0001c0002t0011g0018 a0001c0002t0012g0010 a0001c0002t0012g0040 a0001c0002t0012g0041 a0001c0002t0013g0001 a0001c0002t0013g0036 a0001c0002t0013g0037 a0001c0002t0016g0017 a0001c0002t0016g0043 a0001c0002t0032g0019 a0001c0002t0034g0021	45	332	0.1355	-10	c.58- others(25): Show c.58-6025_58-6016delTGTGTGTGCG	SCAMP1	ENSG00000085365.18	transcript	ENST00000621999.5	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr5	TogoVar
SCAMP1_chr5_78355617_78485739	78423012	GCGCGCAC others(3): Show GCGCGCACACA	G G	intron_variant intron_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0023 a0001c0001t0023	a0001c0001t0023g0007 a0001c0001t0023g0007	1	332	0.0030	-10	c.632 others(27): Show c.632+1054_632+1063delGCGCACACAC	SCAMP1	ENSG00000085365.18	transcript	ENST00000621999.5	protein_coding	6/8		INFO_REALIGN_3_PRIME	chr5	TogoVar
SCAMP1_chr5_78355617_78485739	78423016	GCACACAC others(3): Show GCACACACACA	G G	intron_variant intron_variant	MODIFIER	HG02155.hp1 HG02273.hp1 HG03130.hp1 others(6): Show HG02155.hp1 HG02273.hp1 HG03130.hp1 HG03453.hp2 HG04204.hp1 NA18968.hp1 NA18977.hp1 NA18987.hp1 NA18999.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0011 a0001c0001t0014 others(2): Show a0001c0001t0003 a0001c0001t0011 a0001c0001t0014 a0001c0001t0029 a0001c0001t0039	a0001c0001t0003g0267 a0001c0001t0003g0314 a0001c0001t0003g0316 others(6): Show a0001c0001t0003g0267 a0001c0001t0003g0314 a0001c0001t0003g0316 a0001c0001t0003g0322 a0001c0001t0011g0156 a0001c0001t0014g0293 a0001c0001t0014g0310 a0001c0001t0029g0161 a0001c0001t0039g0317	9	332	0.0271	-10	c.632 others(27): Show c.632+1083_632+1092delCACACACACA	SCAMP1	ENSG00000085365.18	transcript	ENST00000621999.5	protein_coding	6/8		INFO_REALIGN_3_PRIME	chr5	TogoVar
SCAMP1_chr5_78355617_78485739	78462196	AGTGTGTG others(3): Show AGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02559.hp1 HG02630.hp1 others(7): Show HG02055.hp2 HG02559.hp1 HG02630.hp1 HG02647.hp1 HG02818.hp2 HG02970.hp1 HG02976.hp2 HG03471.hp2 HG03486.hp2 NA19240.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0023 a0002c0003t0007 a0001c0001t0023 a0002c0003t0007	a0001c0001t0023g0007 a0002c0003t0007g0163 a0002c0003t0007g0164 others(7): Show a0001c0001t0023g0007 a0002c0003t0007g0163 a0002c0003t0007g0164 a0002c0003t0007g0165 a0002c0003t0007g0166 a0002c0003t0007g0167 a0002c0003t0007g0168 a0002c0003t0007g0169 a0002c0003t0007g0170 a0002c0003t0007g0171	10	332	0.0301	-10	c.852 others(27): Show c.852+2857_852+2866delGTGTGTGTGT	SCAMP1	ENSG00000085365.18	transcript	ENST00000621999.5	protein_coding	8/8		INFO_REALIGN_3_PRIME	chr5	TogoVar
SCAMP2_chr15_74838730_74878365	74861900	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02896.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0268 a0001c0001t0001g0268	1	386	0.0026	-10	c.58- others(25): Show c.58-7261_58-7252delTTTTTTTTTT	SCAMP2	ENSG00000140497.16	transcript	ENST00000268099.13	protein_coding	1/8			chr15	TogoVar
SCAMP2_chr15_74838730_74878365	74862280	AAAAAAAA others(3): Show AAAAAAAAAAT	A A	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0024 a0001c0001t0024	a0001c0001t0024g0010 a0001c0001t0024g0010	1	386	0.0026	-10	c.58- others(25): Show c.58-7641_58-7632delATTTTTTTTT	SCAMP2	ENSG00000140497.16	transcript	ENST00000268099.13	protein_coding	1/8			chr15	TogoVar
SCAMP2_chr15_74838730_74878365	74862853	TACACACA others(3): Show TACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG02145.hp2 HG02257.hp2 others(19): Show HG01496.hp2 HG02145.hp2 HG02257.hp2 HG02258.hp1 HG02280.hp2 HG02451.hp1 HG02486.hp2 HG02559.hp1 HG02717.hp2 HG02818.hp1 HG02895.hp2 HG02976.hp1 HG03098.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03486.hp2 NA18522.hp1 NA18906.hp2 NA18962.hp2 NA19240.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0001 a0001c0001t0005 a0001c0001t0007 others(4): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0007 a0001c0001t0010 a0001c0001t0018 a0001c0001t0028 a0001c0007t0001	a0001c0001t0001g0113 a0001c0001t0001g0117 a0001c0001t0001g0124 others(19): Show a0001c0001t0001g0113 a0001c0001t0001g0117 a0001c0001t0001g0124 a0001c0001t0001g0131 a0001c0001t0001g0163 a0001c0001t0001g0167 a0001c0001t0001g0199 a0001c0001t0001g0259 a0001c0001t0001g0270 a0001c0001t0005g0153 a0001c0001t0005g0164 a0001c0001t0005g0165 a0001c0001t0007g0215 a0001c0001t0010g0139 a0001c0001t0010g0140 a0001c0001t0010g0141 a0001c0001t0010g0142 a0001c0001t0010g0143 a0001c0001t0010g0216 a0001c0001t0018g0196 a0001c0001t0028g0154 a0001c0007t0001g0166	22	386	0.0570	-10	c.58- others(25): Show c.58-8214_58-8205delGTGTGTGTGT	SCAMP2	ENSG00000140497.16	transcript	ENST00000268099.13	protein_coding	1/8			chr15	TogoVar
SCAMP2_chr15_74838730_74878365	74873426	GCCCCCCC others(3): Show GCCCCCCCCCC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02886.hp1 HG02886.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0021 a0001c0001t0008g0021	1	386	0.0026	-10	c.-18 others(19): Show c.-181_-172delGGGGGGGGGG	SCAMP2	ENSG00000140497.16	transcript	ENST00000268099.13	protein_coding		62		chr15	TogoVar
SCAMP4_chr19_1900399_1931013	1905633	TGCGCGCG others(3): Show TGCGCGCGCGC	T T	intron_variant intron_variant	MODIFIER	HG03669.hp2 NA18951.hp2 NA19078.hp2 HG03669.hp2 NA18951.hp2 NA19078.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0398 a0001c0001t0003g0396 a0001c0001t0003g0397 a0001c0001t0001g0398 a0001c0001t0003g0396 a0001c0001t0003g0397	3	442	0.0068	-10	c.-42 others(25): Show c.-42+200_-42+209delCGCGCGCGCG	SCAMP4	ENSG00000227500.11	transcript	ENST00000316097.13	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr19	TogoVar
SCAMP5_chr15_74990563_75026495	74990992	CTCTCTTT others(3): Show CTCTCTTTCTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03195.hp1 HG03195.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0179 a0001c0001t0001g0179	1	370	0.0027	-10	c.-47 others(21): Show c.-4729_-4720delTCTCTTTCTT	SCAMP5	ENSG00000198794.12	transcript	ENST00000425597.8	protein_coding		4570		chr15	TogoVar
SCAMP5_chr15_74990563_75026495	74995539	GGCGCGCG others(3): Show GGCGCGCGCGC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02717.hp1 HG03139.hp1 HG03471.hp1 HG02717.hp1 HG03139.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0015 a0001c0001t0001g0015	3	370	0.0081	-10	c.-18 others(19): Show c.-182_-173delGCGCGCGCGC	SCAMP5	ENSG00000198794.12	transcript	ENST00000425597.8	protein_coding		23		chr15	TogoVar
SCAMP5_chr15_74990563_75026495	75001869	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01256.hp2 NA19043.hp1 HG01256.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0005 a0001c0002t0006 a0001c0001t0005 a0001c0002t0006	a0001c0001t0005g0252 a0001c0002t0006g0053 a0001c0001t0005g0252 a0001c0002t0006g0053	2	370	0.0054	-10	c.-49 others(27): Show c.-49+6216_-49+6225delAAAAAAAAAA	SCAMP5	ENSG00000198794.12	transcript	ENST00000425597.8	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr15	TogoVar
SCAPER_chr15_76342904_76910340	76366086	TACACACA others(3): Show TACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG03041.hp1 HG03540.hp1 HG00323.hp1 HG03041.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0007 a0001c0001t0001g0001 a0001c0001t0001g0005 a0001c0001t0001g0007	3	312	0.0096	-10	c.385 others(31): Show c.3855+10066_3855+10075delGTGTGTGTGT	SCAPER	ENSG00000140386.13	transcript	ENST00000563290.6	protein_coding	29/31			chr15	TogoVar
SCAPER_chr15_76342904_76910340	76370291	ATTTTTTT others(3): Show ATTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG00323.hp2 others(92): Show HG00140.hp1 HG00280.hp1 HG00323.hp2 HG00544.hp1 HG00597.hp2 HG00621.hp2 HG00639.hp2 HG00733.hp1 HG00735.hp2 HG00738.hp1 HG00741.hp2 HG01070.hp1 HG01074.hp1 HG01081.hp2 HG01106.hp1 HG01109.hp1 HG01123.hp2 HG01167.hp1 HG01258.hp2 HG01261.hp2 HG01361.hp1 HG01496.hp2 HG01516.hp2 HG01884.hp2 HG01891.hp1 HG01928.hp2 HG01943.hp2 HG01978.hp1 HG01993.hp1 HG02015.hp2 HG02056.hp1 HG02071.hp1 HG02080.hp2 HG02083.hp1 HG02132.hp1 HG02300.hp2 HG02486.hp1 HG02602.hp1 HG02622.hp1 HG02683.hp2 HG02717.hp1 HG02735.hp1 HG02922.hp1 HG03239.hp2 HG03453.hp2 HG03490.hp1 HG03654.hp2 HG03688.hp1 HG03704.hp1 HG03710.hp2 HG04204.hp2 HG06807.hp2 NA18939.hp1 NA18940.hp1 NA18942.hp1 NA18944.hp1 NA18948.hp1 NA18950.hp1 NA18952.hp2 NA18957.hp1 NA18960.hp2 NA18961.hp1 NA18965.hp1 NA18967.hp2 NA18969.hp2 NA18970.hp2 NA18973.hp2 NA18977.hp2 NA18979.hp2 NA18980.hp2 NA18984.hp1 NA18985.hp2 NA18990.hp2 NA18993.hp2 NA18998.hp1 NA19001.hp2 NA19005.hp1 NA19007.hp1 NA19009.hp1 NA19010.hp1 NA19012.hp2 NA19057.hp2 NA19058.hp2 NA19068.hp2 NA19070.hp2 NA19077.hp2 NA19079.hp2 NA19083.hp1 NA19085.hp2 NA19090.hp2 NA19240.hp2 NA20300.hp1 NA20805.hp1 NA20905.hp2 homoSapiens_chm13v2.hp1	a0001 a0015 a0001 a0015	a0001c0001 a0001c0005 a0001c0007 others(2): Show a0001c0001 a0001c0005 a0001c0007 a0001c0012 a0015c0016	a0001c0001t0001 a0001c0001t0008 a0001c0005t0001 others(4): Show a0001c0001t0001 a0001c0001t0008 a0001c0005t0001 a0001c0007t0001 a0001c0007t0010 a0001c0012t0001 a0015c0016t0001	a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 others(92): Show a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0138 a0001c0001t0001g0160 a0001c0001t0001g0311 a0001c0001t0008g0101 a0001c0005t0001g0018 a0001c0005t0001g0042 a0001c0005t0001g0058 a0001c0005t0001g0059 a0001c0005t0001g0060 a0001c0005t0001g0310 a0001c0007t0001g0025 a0001c0007t0001g0026 a0001c0007t0001g0027 a0001c0007t0001g0029 a0001c0007t0010g0028 a0001c0012t0001g0071 a0001c0012t0001g0072 a0015c0016t0001g0053	95	312	0.3045	-10	c.385 others(29): Show c.3855+5861_3855+5870delAAAAAAAAAA	SCAPER	ENSG00000140386.13	transcript	ENST00000563290.6	protein_coding	29/31			chr15	TogoVar
SCAPER_chr15_76342904_76910340	76389500	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01516.hp1 HG01516.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0222 a0002c0002t0002g0222	1	312	0.0032	-10	c.346 others(29): Show c.3468-7895_3468-7886delTTTTTTTTTT	SCAPER	ENSG00000140386.13	transcript	ENST00000563290.6	protein_coding	27/31			chr15	TogoVar
SCAPER_chr15_76342904_76910340	76420235	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA20752.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0008 a0001c0001t0001g0008	1	312	0.0032	-10	c.331 others(31): Show c.3311+13833_3311+13842delAAAAAAAAAA	SCAPER	ENSG00000140386.13	transcript	ENST00000563290.6	protein_coding	26/31			chr15	TogoVar
SCAPER_chr15_76342904_76910340	76431676	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01243.hp1	a0001 a0001	a0001c0010 a0001c0010	a0001c0010t0001 a0001c0010t0001	a0001c0010t0001g0169 a0001c0010t0001g0169	1	312	0.0032	-10	c.331 others(29): Show c.3311+2392_3311+2401delTTTTTTTTTT	SCAPER	ENSG00000140386.13	transcript	ENST00000563290.6	protein_coding	26/31			chr15	TogoVar
SCAPER_chr15_76342904_76910340	76476595	ATTTTTTT others(3): Show ATTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	NA19085.hp1 NA19085.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0261 a0002c0002t0002g0261	1	312	0.0032	-10	c.295 others(29): Show c.2955-5270_2955-5261delAAAAAAAAAA	SCAPER	ENSG00000140386.13	transcript	ENST00000563290.6	protein_coding	24/31			chr15	TogoVar
SCAPER_chr15_76342904_76910340	76488714	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02056.hp1 HG03654.hp2 NA20905.hp2 HG02056.hp1 HG03654.hp2 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0012 a0001c0001 a0001c0012	a0001c0001t0001 a0001c0012t0001 a0001c0001t0001 a0001c0012t0001	a0001c0001t0001g0088 a0001c0001t0001g0105 a0001c0012t0001g0072 a0001c0001t0001g0088 a0001c0001t0001g0105 a0001c0012t0001g0072	3	312	0.0096	-10	c.295 others(31): Show c.2954+16135_2954+16144delAAAAAAAAAA	SCAPER	ENSG00000140386.13	transcript	ENST00000563290.6	protein_coding	24/31			chr15	TogoVar
SCAPER_chr15_76342904_76910340	76495989	GAGAGACA others(3): Show GAGAGACACAC	G G	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02965.hp1 HG03139.hp2 others(3): Show HG02809.hp1 HG02965.hp1 HG03139.hp2 HG03486.hp2 NA18906.hp2 NA18985.hp1	a0002 a0003 a0002 a0003	a0002c0002 a0003c0003 a0002c0002 a0003c0003	a0002c0002t0002 a0003c0003t0002 a0003c0003t0011 a0002c0002t0002 a0003c0003t0002 a0003c0003t0011	a0002c0002t0002g0268 a0003c0003t0002g0205 a0003c0003t0002g0206 others(3): Show a0002c0002t0002g0268 a0003c0003t0002g0205 a0003c0003t0002g0206 a0003c0003t0002g0208 a0003c0003t0002g0209 a0003c0003t0011g0312	6	312	0.0192	-10	c.295 others(29): Show c.2954+8860_2954+8869delGTGTGTCTCT	SCAPER	ENSG00000140386.13	transcript	ENST00000563290.6	protein_coding	24/31			chr15	TogoVar
SCAPER_chr15_76342904_76910340	76495991	GAGACACA others(3): Show GAGACACACAC	G G	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0009 a0009	a0009c0013 a0009c0013	a0009c0013t0003 a0009c0013t0003	a0009c0013t0003g0123 a0009c0013t0003g0123	1	312	0.0032	-10	c.295 others(29): Show c.2954+8858_2954+8867delGTGTGTGTCT	SCAPER	ENSG00000140386.13	transcript	ENST00000563290.6	protein_coding	24/31			chr15	TogoVar
SCAPER_chr15_76342904_76910340	76497989	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0002	a0003c0003t0002g0200 a0003c0003t0002g0200	1	312	0.0032	-10	c.295 others(29): Show c.2954+6860_2954+6869delTTTTTTTTTT	SCAPER	ENSG00000140386.13	transcript	ENST00000563290.6	protein_coding	24/31			chr15	TogoVar
SCAPER_chr15_76342904_76910340	76542548	AAAAATAA others(3): Show AAAAATAAAAT	A A	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02258.hp2 HG02451.hp1 others(5): Show HG02145.hp2 HG02258.hp2 HG02451.hp1 HG02622.hp2 HG02647.hp1 HG02895.hp1 HG03225.hp1 NA19030.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0002	a0003c0003t0002g0198 a0003c0003t0002g0199 a0003c0003t0002g0200 others(5): Show a0003c0003t0002g0198 a0003c0003t0002g0199 a0003c0003t0002g0200 a0003c0003t0002g0201 a0003c0003t0002g0202 a0003c0003t0002g0203 a0003c0003t0002g0204 a0003c0003t0002g0212	8	312	0.0256	-10	c.283 others(31): Show c.2838+31600_2838+31609delATTTTATTTT	SCAPER	ENSG00000140386.13	transcript	ENST00000563290.6	protein_coding	23/31			chr15	TogoVar
SCAPER_chr15_76342904_76910340	76568190	CATATATA others(3): Show CATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00544.hp2 HG00639.hp1 others(88): Show HG00140.hp2 HG00544.hp2 HG00639.hp1 HG00738.hp2 HG00741.hp1 HG01070.hp2 HG01074.hp2 HG01175.hp1 HG01258.hp1 HG01261.hp1 HG01361.hp2 HG01433.hp2 HG01516.hp1 HG01884.hp1 HG01891.hp2 HG01928.hp1 HG01943.hp1 HG01978.hp2 HG01993.hp2 HG02015.hp1 HG02027.hp1 HG02040.hp1 HG02055.hp1 HG02056.hp2 HG02071.hp2 HG02074.hp1 HG02080.hp1 HG02132.hp2 HG02135.hp1 HG02300.hp1 HG02559.hp1 HG02683.hp1 HG02683.hp2 HG02717.hp1 HG02735.hp2 HG02818.hp1 HG02965.hp2 HG03017.hp2 HG03195.hp1 HG03453.hp2 HG03486.hp1 HG03688.hp2 HG03704.hp2 HG04204.hp1 NA18939.hp1 NA18939.hp2 NA18942.hp2 NA18945.hp2 NA18948.hp2 NA18950.hp2 NA18952.hp1 NA18960.hp1 NA18960.hp2 NA18961.hp2 NA18963.hp2 NA18965.hp2 NA18970.hp1 NA18972.hp2 NA18973.hp1 NA18977.hp1 NA18984.hp2 NA18985.hp1 NA18985.hp2 NA18990.hp1 NA18993.hp2 NA18998.hp1 NA18998.hp2 NA19005.hp2 NA19010.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19056.hp1 NA19057.hp1 NA19058.hp1 NA19062.hp1 NA19062.hp2 NA19063.hp2 NA19064.hp2 NA19065.hp2 NA19070.hp1 NA19077.hp1 NA19079.hp1 NA19083.hp2 NA19085.hp1 NA19091.hp1 NA19240.hp2 NA20300.hp1 NA20752.hp1 NA20805.hp2 NA21309.hp1	a0001 a0002 a0005 others(4): Show a0001 a0002 a0005 a0008 a0010 a0011 a0012	a0001c0001 a0001c0018 a0002c0002 others(6): Show a0001c0001 a0001c0018 a0002c0002 a0002c0022 a0005c0011 a0008c0015 a0010c0023 a0011c0024 a0012c0025	a0001c0001t0001 a0001c0001t0003 a0001c0018t0001 others(7): Show a0001c0001t0001 a0001c0001t0003 a0001c0018t0001 a0002c0002t0002 a0002c0022t0002 a0005c0011t0002 a0008c0015t0002 a0010c0023t0002 a0011c0024t0002 a0012c0025t0002	a0001c0001t0001g0061 a0001c0001t0001g0066 a0001c0001t0001g0067 others(88): Show a0001c0001t0001g0061 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0075 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0103 a0001c0001t0003g0156 a0001c0018t0001g0173 a0002c0002t0002g0190 a0002c0002t0002g0194 a0002c0002t0002g0219 a0002c0002t0002g0221 a0002c0002t0002g0222 a0002c0002t0002g0223 a0002c0002t0002g0224 a0002c0002t0002g0226 a0002c0002t0002g0227 a0002c0002t0002g0228 a0002c0002t0002g0230 a0002c0002t0002g0231 a0002c0002t0002g0233 a0002c0002t0002g0234 a0002c0002t0002g0235 a0002c0002t0002g0236 a0002c0002t0002g0237 a0002c0002t0002g0239 a0002c0002t0002g0240 a0002c0002t0002g0241 a0002c0002t0002g0242 a0002c0002t0002g0243 a0002c0002t0002g0244 a0002c0002t0002g0245 a0002c0002t0002g0246 a0002c0002t0002g0247 a0002c0002t0002g0248 a0002c0002t0002g0249 a0002c0002t0002g0251 a0002c0002t0002g0253 a0002c0002t0002g0254 a0002c0002t0002g0255 a0002c0002t0002g0256 a0002c0002t0002g0257 a0002c0002t0002g0258 a0002c0002t0002g0259 a0002c0002t0002g0260 a0002c0002t0002g0261 a0002c0002t0002g0262 a0002c0002t0002g0264 a0002c0002t0002g0266 a0002c0002t0002g0267 a0002c0002t0002g0268 a0002c0002t0002g0269 a0002c0002t0002g0270 a0002c0002t0002g0271 a0002c0002t0002g0272 a0002c0002t0002g0273 a0002c0002t0002g0274 a0002c0002t0002g0276 a0002c0002t0002g0278 a0002c0002t0002g0279 a0002c0002t0002g0280 a0002c0002t0002g0281 a0002c0002t0002g0282 a0002c0002t0002g0283 a0002c0002t0002g0286 a0002c0002t0002g0287 a0002c0002t0002g0288 a0002c0002t0002g0289 a0002c0002t0002g0291 a0002c0002t0002g0292 a0002c0002t0002g0293 a0002c0002t0002g0295 a0002c0002t0002g0296 a0002c0002t0002g0297 a0002c0002t0002g0298 a0002c0002t0002g0299 a0002c0002t0002g0309 a0002c0022t0002g0290 a0005c0011t0002g0225 a0005c0011t0002g0275 a0005c0011t0002g0285 a0008c0015t0002g0220 a0010c0023t0002g0229 a0011c0024t0002g0284 a0012c0025t0002g0263	91	312	0.2917	-10	c.283 others(29): Show c.2838+5958_2838+5967delATATATATAT	SCAPER	ENSG00000140386.13	transcript	ENST00000563290.6	protein_coding	23/31			chr15	TogoVar
SCAPER_chr15_76342904_76910340	76600385	ATATGTGT others(3): Show ATATGTGTGTG	A A	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0002	a0003c0003t0002g0186 a0003c0003t0002g0186	1	312	0.0032	-10	c.271 others(31): Show c.2711+21369_2711+21378delCACACACATA	SCAPER	ENSG00000140386.13	transcript	ENST00000563290.6	protein_coding	22/31			chr15	TogoVar
SCAPER_chr15_76342904_76910340	76600387	ATGTGTGT others(3): Show ATGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG01243.hp2 HG01255.hp1 others(6): Show HG01175.hp2 HG01243.hp2 HG01255.hp1 HG01433.hp1 HG02055.hp2 HG02280.hp1 NA18972.hp1 NA19007.hp2 NA19030.hp1	a0001 a0003 a0006 others(2): Show a0001 a0003 a0006 a0013 a0014	a0001c0001 a0001c0018 a0003c0003 others(3): Show a0001c0001 a0001c0018 a0003c0003 a0006c0008 a0013c0021 a0014c0020	a0001c0001t0003 a0001c0018t0001 a0003c0003t0005 others(3): Show a0001c0001t0003 a0001c0018t0001 a0003c0003t0005 a0006c0008t0001 a0013c0021t0001 a0014c0020t0003	a0001c0001t0003g0120 a0001c0001t0003g0137 a0001c0001t0003g0150 others(6): Show a0001c0001t0003g0120 a0001c0001t0003g0137 a0001c0001t0003g0150 a0001c0001t0003g0157 a0001c0018t0001g0173 a0003c0003t0005g0195 a0006c0008t0001g0175 a0013c0021t0001g0197 a0014c0020t0003g0162	9	312	0.0289	-10	c.271 others(31): Show c.2711+21367_2711+21376delCACACACACA	SCAPER	ENSG00000140386.13	transcript	ENST00000563290.6	protein_coding	22/31			chr15	TogoVar

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