Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SKAP1_chr17_48128442_48435214	48361071	GTACTATA others(3): Show GTACTATACTA	G G	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp2 HG00323.hp1 others(22): Show HG00099.hp2 HG00280.hp2 HG00323.hp1 HG01106.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp1 HG01358.hp1 HG02109.hp2 HG02145.hp2 HG02486.hp1 HG02572.hp1 HG02647.hp1 HG02698.hp1 HG02895.hp1 HG02897.hp2 HG02976.hp1 HG03130.hp1 HG03471.hp2 HG03942.hp2 HG04199.hp1 NA18522.hp2 NA18942.hp2 NA18945.hp1 NA18951.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0002 others(1): Show a0001c0001 a0001c0003 a0002c0002 a0002c0004	a0001c0001t0001 a0001c0003t0001 a0002c0002t0001 others(1): Show a0001c0001t0001 a0001c0003t0001 a0002c0002t0001 a0002c0004t0001	a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0054 others(22): Show a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0054 a0001c0001t0001g0075 a0001c0001t0001g0109 a0001c0001t0001g0164 a0001c0001t0001g0169 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0003t0001g0064 a0002c0002t0001g0003 a0002c0002t0001g0022 a0002c0002t0001g0029 a0002c0002t0001g0132 a0002c0002t0001g0148 a0002c0002t0001g0239 a0002c0002t0001g0244 a0002c0002t0001g0245 a0002c0002t0001g0246 a0002c0002t0001g0247 a0002c0004t0001g0209 a0002c0004t0001g0227 a0002c0004t0001g0228 a0002c0004t0001g0230	25	292	0.0856	-10	c.178 others(27): Show c.178+2708_178+2717delTAGTATAGTA	SKAP1	ENSG00000141293.16	transcript	ENST00000336915.11	protein_coding	3/12			chr17	TogoVar
SKAP1_chr17_48128442_48435214	48371654	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00544.hp1 HG00558.hp1 others(50): Show HG00280.hp2 HG00544.hp1 HG00558.hp1 HG00741.hp2 HG01070.hp1 HG01071.hp1 HG01106.hp1 HG01169.hp1 HG01243.hp1 HG01257.hp2 HG01358.hp1 HG01884.hp2 HG02109.hp2 HG02258.hp2 HG02273.hp1 HG02280.hp2 HG02451.hp1 HG02486.hp2 HG02572.hp1 HG02602.hp2 HG02622.hp1 HG02698.hp1 HG02886.hp1 HG02895.hp1 HG02895.hp2 HG02897.hp2 HG02965.hp2 HG03130.hp2 HG03225.hp2 HG03239.hp1 HG03540.hp1 HG04199.hp2 NA18612.hp1 NA18939.hp2 NA18943.hp2 NA18945.hp1 NA18946.hp2 NA18950.hp2 NA18965.hp2 NA18977.hp1 NA18982.hp1 NA18989.hp1 NA19005.hp1 NA19010.hp2 NA19030.hp1 NA19057.hp2 NA19065.hp1 NA19068.hp1 NA19074.hp1 NA19091.hp2 NA19240.hp2 NA21309.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0002 a0001c0001 a0001c0003 a0002c0002	a0001c0001t0001 a0001c0003t0001 a0002c0002t0001 a0001c0001t0001 a0001c0003t0001 a0002c0002t0001	a0001c0001t0001g0002 a0001c0001t0001g0038 a0001c0001t0001g0039 others(50): Show a0001c0001t0001g0002 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0040 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0048 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0068 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0075 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0233 a0001c0001t0001g0235 a0001c0001t0001g0285 a0001c0001t0001g0286 a0001c0003t0001g0049 a0001c0003t0001g0050 a0001c0003t0001g0051 a0001c0003t0001g0052 a0001c0003t0001g0060 a0001c0003t0001g0064 a0001c0003t0001g0067 a0001c0003t0001g0069 a0001c0003t0001g0070 a0001c0003t0001g0076 a0001c0003t0001g0077 a0001c0003t0001g0078 a0001c0003t0001g0081 a0001c0003t0001g0083 a0001c0003t0001g0085 a0001c0003t0001g0086 a0001c0003t0001g0087 a0002c0002t0001g0032 a0002c0002t0001g0053 a0002c0002t0001g0074 a0002c0002t0001g0244 a0002c0002t0001g0245 a0002c0002t0001g0246 a0002c0002t0001g0247	53	292	0.1815	-10	c.153 others(27): Show c.153-7850_153-7841delTTTTTTTTTT	SKAP1	ENSG00000141293.16	transcript	ENST00000336915.11	protein_coding	2/12			chr17	TogoVar
SKAP1_chr17_48128442_48435214	48410934	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG02818.hp1 HG02922.hp2 others(10): Show HG02630.hp2 HG02818.hp1 HG02922.hp2 HG03098.hp1 HG03195.hp1 HG03209.hp2 HG03225.hp1 HG03453.hp1 HG03486.hp2 HG03516.hp2 HG03540.hp2 HG03579.hp1 NA18522.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0001 a0001c0001t0001 a0002c0002t0001	a0001c0001t0001g0092 a0001c0001t0001g0094 a0002c0002t0001g0088 others(10): Show a0001c0001t0001g0092 a0001c0001t0001g0094 a0002c0002t0001g0088 a0002c0002t0001g0089 a0002c0002t0001g0090 a0002c0002t0001g0091 a0002c0002t0001g0093 a0002c0002t0001g0095 a0002c0002t0001g0096 a0002c0002t0001g0097 a0002c0002t0001g0098 a0002c0002t0001g0099 a0002c0002t0001g0100	13	292	0.0445	-10	c.47- others(27): Show c.47-14159_47-14150delTTTTTTTTTT	SKAP1	ENSG00000141293.16	transcript	ENST00000336915.11	protein_coding	1/12			chr17	TogoVar
SKAP2_chr7_26662068_26869590	26687740	GGTTTGCA others(3): Show GGTTTGCAAAA	G G	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0117 a0001c0001t0002g0117	1	296	0.0034	-10	c.874 others(27): Show c.874+2535_874+2544delTTTTGCAAAC	SKAP2	ENSG00000005020.13	transcript	ENST00000345317.7	protein_coding	10/12			chr7	TogoVar
SKAP2_chr7_26662068_26869590	26693332	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01167.hp1 HG01169.hp1 others(6): Show HG00741.hp2 HG01167.hp1 HG01169.hp1 HG02258.hp2 HG02647.hp1 HG02809.hp1 HG02970.hp1 HG03139.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0007 a0001c0001t0002 a0001c0001t0007	a0001c0001t0002g0033 a0001c0001t0002g0034 a0001c0001t0002g0035 others(5): Show a0001c0001t0002g0033 a0001c0001t0002g0034 a0001c0001t0002g0035 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0007g0001 a0001c0001t0007g0005 a0001c0001t0007g0007	9	296	0.0304	-10	c.797 others(27): Show c.797-2980_797-2971delTTTTTTTTTT	SKAP2	ENSG00000005020.13	transcript	ENST00000345317.7	protein_coding	9/12			chr7	TogoVar
SKAP2_chr7_26662068_26869590	26717509	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01891.hp2 HG02886.hp1 others(5): Show HG01081.hp1 HG01891.hp2 HG02886.hp1 HG03195.hp1 HG03471.hp2 HG03540.hp2 NA18906.hp2 NA18978.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0004 a0001c0001 a0004c0004	a0001c0001t0001 a0004c0004t0002 a0001c0001t0001 a0004c0004t0002	a0001c0001t0001g0183 a0004c0004t0002g0113 a0004c0004t0002g0114 others(5): Show a0001c0001t0001g0183 a0004c0004t0002g0113 a0004c0004t0002g0114 a0004c0004t0002g0115 a0004c0004t0002g0116 a0004c0004t0002g0184 a0004c0004t0002g0185 a0004c0004t0002g0187	8	296	0.0270	-10	c.796 others(27): Show c.796+7909_796+7918delTTTTTTTTTT	SKAP2	ENSG00000005020.13	transcript	ENST00000345317.7	protein_coding	9/12			chr7	TogoVar
SKAP2_chr7_26662068_26869590	26720051	AACACACA others(3): Show AACACACACAC	A A	intron_variant intron_variant	MODIFIER	NA18747.hp1 NA18747.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0089 a0001c0001t0001g0089	1	296	0.0034	-10	c.796 others(27): Show c.796+5367_796+5376delGTGTGTGTGT	SKAP2	ENSG00000005020.13	transcript	ENST00000345317.7	protein_coding	9/12			chr7	TogoVar
SKAP2_chr7_26662068_26869590	26775530	CGTGTGTG others(3): Show CGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG00735.hp2 HG00738.hp1 others(29): Show HG00733.hp2 HG00735.hp2 HG00738.hp1 HG01069.hp1 HG01070.hp2 HG01081.hp2 HG01109.hp1 HG01167.hp2 HG01243.hp2 HG01346.hp1 HG01884.hp2 HG01928.hp2 HG01934.hp2 HG02109.hp1 HG02145.hp2 HG02257.hp1 HG02300.hp1 HG02451.hp1 HG02572.hp2 HG02622.hp2 HG02818.hp2 HG02897.hp2 HG02922.hp1 HG03209.hp2 HG03225.hp2 HG03471.hp1 HG03491.hp2 HG03492.hp1 NA18988.hp1 NA19007.hp1 NA20129.hp2 NA20300.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0016 a0002c0002t0001 others(2): Show a0001c0001t0001 a0001c0001t0016 a0002c0002t0001 a0002c0002t0002 a0002c0002t0009	a0001c0001t0001g0198 a0001c0001t0016g0228 a0002c0002t0001g0206 others(29): Show a0001c0001t0001g0198 a0001c0001t0016g0228 a0002c0002t0001g0206 a0002c0002t0001g0213 a0002c0002t0002g0193 a0002c0002t0002g0200 a0002c0002t0002g0201 a0002c0002t0002g0202 a0002c0002t0002g0203 a0002c0002t0002g0204 a0002c0002t0002g0205 a0002c0002t0002g0210 a0002c0002t0002g0211 a0002c0002t0002g0212 a0002c0002t0002g0214 a0002c0002t0002g0215 a0002c0002t0002g0216 a0002c0002t0002g0217 a0002c0002t0002g0218 a0002c0002t0002g0219 a0002c0002t0002g0220 a0002c0002t0002g0221 a0002c0002t0002g0236 a0002c0002t0002g0237 a0002c0002t0002g0238 a0002c0002t0002g0239 a0002c0002t0002g0241 a0002c0002t0002g0252 a0002c0002t0002g0253 a0002c0002t0002g0254 a0002c0002t0009g0242 a0002c0002t0009g0243	32	296	0.1081	-10	c.308 others(29): Show c.308-35576_308-35567delACACACACAC	SKAP2	ENSG00000005020.13	transcript	ENST00000345317.7	protein_coding	4/12			chr7	TogoVar
SKAP2_chr7_26662068_26869590	26796332	GTGACACT others(3): Show GTGACACTAAT	G G	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00438.hp2 HG00597.hp1 others(83): Show HG00423.hp1 HG00438.hp2 HG00597.hp1 HG00642.hp2 HG00741.hp2 HG01099.hp2 HG01106.hp2 HG01123.hp1 HG01167.hp1 HG01169.hp1 HG01243.hp2 HG01255.hp1 HG01261.hp2 HG01361.hp2 HG01516.hp1 HG01517.hp1 HG01884.hp1 HG02040.hp1 HG02055.hp2 HG02071.hp2 HG02132.hp1 HG02155.hp1 HG02165.hp2 HG02257.hp2 HG02258.hp1 HG02280.hp2 HG02486.hp1 HG02486.hp2 HG02572.hp1 HG02622.hp1 HG02717.hp1 HG02717.hp2 HG02809.hp2 HG02818.hp1 HG02922.hp2 HG02970.hp2 HG03098.hp2 HG03209.hp1 HG03225.hp1 HG03486.hp2 HG03490.hp2 HG03492.hp2 HG03516.hp1 HG03540.hp1 HG03579.hp2 HG03710.hp1 HG03834.hp1 HG04199.hp1 HG04228.hp1 HG06807.hp2 NA18941.hp1 NA18942.hp1 NA18943.hp2 NA18946.hp2 NA18948.hp2 NA18953.hp1 NA18955.hp2 NA18962.hp1 NA18965.hp2 NA18966.hp2 NA18967.hp1 NA18972.hp1 NA18977.hp1 NA18978.hp2 NA18979.hp1 NA18987.hp2 NA18988.hp2 NA18989.hp2 NA18990.hp1 NA18992.hp2 NA19006.hp2 NA19011.hp2 NA19030.hp2 NA19057.hp2 NA19063.hp1 NA19064.hp2 NA19068.hp1 NA19080.hp2 NA19081.hp1 NA19082.hp1 NA19083.hp2 NA19089.hp2 NA20129.hp1 NA20805.hp1 NA20805.hp2 NA20905.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0002c0002 a0003c0003 others(1): Show a0001c0001 a0002c0002 a0003c0003 a0003c0005	a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 others(13): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0001c0001t0012 a0001c0001t0014 a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 a0001c0001t0019 a0002c0002t0003 a0002c0002t0009 a0003c0003t0005 a0003c0005t0002	a0001c0001t0002g0003 a0001c0001t0002g0207 a0001c0001t0002g0208 others(81): Show a0001c0001t0002g0003 a0001c0001t0002g0207 a0001c0001t0002g0208 a0001c0001t0002g0235 a0001c0001t0002g0244 a0001c0001t0002g0245 a0001c0001t0002g0246 a0001c0001t0002g0247 a0001c0001t0002g0248 a0001c0001t0002g0249 a0001c0001t0002g0250 a0001c0001t0002g0251 a0001c0001t0002g0255 a0001c0001t0002g0256 a0001c0001t0002g0257 a0001c0001t0002g0258 a0001c0001t0002g0259 a0001c0001t0002g0260 a0001c0001t0002g0261 a0001c0001t0002g0262 a0001c0001t0002g0263 a0001c0001t0002g0264 a0001c0001t0002g0265 a0001c0001t0002g0266 a0001c0001t0002g0267 a0001c0001t0002g0268 a0001c0001t0002g0269 a0001c0001t0002g0270 a0001c0001t0002g0271 a0001c0001t0002g0273 a0001c0001t0002g0274 a0001c0001t0002g0275 a0001c0001t0002g0277 a0001c0001t0002g0278 a0001c0001t0002g0279 a0001c0001t0002g0280 a0001c0001t0002g0281 a0001c0001t0002g0282 a0001c0001t0002g0283 a0001c0001t0004g0028 a0001c0001t0004g0029 a0001c0001t0004g0031 a0001c0001t0004g0071 a0001c0001t0004g0072 a0001c0001t0004g0073 a0001c0001t0004g0103 a0001c0001t0004g0104 a0001c0001t0004g0105 a0001c0001t0004g0106 a0001c0001t0004g0107 a0001c0001t0004g0109 a0001c0001t0004g0110 a0001c0001t0004g0111 a0001c0001t0006g0223 a0001c0001t0006g0225 a0001c0001t0006g0226 a0001c0001t0006g0233 a0001c0001t0006g0234 a0001c0001t0007g0001 a0001c0001t0007g0005 a0001c0001t0007g0007 a0001c0001t0008g0197 a0001c0001t0008g0229 a0001c0001t0008g0230 a0001c0001t0008g0231 a0001c0001t0010g0232 a0001c0001t0012g0004 a0001c0001t0014g0276 a0001c0001t0016g0228 a0001c0001t0017g0272 a0001c0001t0018g0108 a0001c0001t0019g0100 a0002c0002t0003g0209 a0002c0002t0009g0224 a0003c0003t0005g0284 a0003c0003t0005g0285 a0003c0003t0005g0286 a0003c0003t0005g0287 a0003c0003t0005g0288 a0003c0003t0005g0289 a0003c0003t0005g0290 a0003c0003t0005g0291 a0003c0003t0005g0292 a0003c0005t0002g0293	86	296	0.2905	-10	c.307 others(29): Show c.307+47688_307+47697delATTAGTGTCA	SKAP2	ENSG00000005020.13	transcript	ENST00000345317.7	protein_coding	4/12			chr7	TogoVar
SKAP2_chr7_26662068_26869590	26799114	ACAAGGCA others(3): Show ACAAGGCAAGG	A A	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00438.hp2 HG00597.hp1 others(74): Show HG00423.hp1 HG00438.hp2 HG00597.hp1 HG00642.hp2 HG00741.hp2 HG01099.hp2 HG01123.hp1 HG01167.hp1 HG01169.hp1 HG01243.hp2 HG01255.hp1 HG01261.hp2 HG01361.hp2 HG01516.hp1 HG01517.hp1 HG01884.hp1 HG02040.hp1 HG02055.hp2 HG02071.hp2 HG02109.hp2 HG02132.hp1 HG02155.hp1 HG02165.hp2 HG02257.hp2 HG02280.hp2 HG02486.hp1 HG02622.hp1 HG02717.hp1 HG02809.hp2 HG02818.hp1 HG02922.hp2 HG03486.hp2 HG03490.hp2 HG03492.hp2 HG03540.hp1 HG03579.hp2 HG03710.hp1 HG03834.hp1 HG04199.hp1 HG04228.hp1 HG06807.hp2 NA18941.hp1 NA18942.hp1 NA18943.hp2 NA18946.hp2 NA18948.hp2 NA18953.hp1 NA18955.hp2 NA18962.hp1 NA18965.hp2 NA18966.hp2 NA18967.hp1 NA18972.hp1 NA18977.hp1 NA18978.hp2 NA18979.hp1 NA18987.hp2 NA18988.hp2 NA18989.hp2 NA18990.hp1 NA18992.hp2 NA19006.hp2 NA19011.hp2 NA19030.hp2 NA19057.hp2 NA19063.hp1 NA19064.hp2 NA19068.hp1 NA19080.hp2 NA19081.hp1 NA19082.hp1 NA19083.hp2 NA19089.hp2 NA20129.hp1 NA20805.hp1 NA20805.hp2 NA20905.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 others(11): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0001c0001t0012 a0001c0001t0014 a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 a0001c0001t0019 a0002c0002t0003 a0002c0002t0009	a0001c0001t0002g0003 a0001c0001t0002g0207 a0001c0001t0002g0208 others(72): Show a0001c0001t0002g0003 a0001c0001t0002g0207 a0001c0001t0002g0208 a0001c0001t0002g0235 a0001c0001t0002g0244 a0001c0001t0002g0245 a0001c0001t0002g0246 a0001c0001t0002g0247 a0001c0001t0002g0248 a0001c0001t0002g0249 a0001c0001t0002g0250 a0001c0001t0002g0251 a0001c0001t0002g0255 a0001c0001t0002g0256 a0001c0001t0002g0257 a0001c0001t0002g0258 a0001c0001t0002g0259 a0001c0001t0002g0260 a0001c0001t0002g0261 a0001c0001t0002g0262 a0001c0001t0002g0263 a0001c0001t0002g0264 a0001c0001t0002g0265 a0001c0001t0002g0266 a0001c0001t0002g0267 a0001c0001t0002g0268 a0001c0001t0002g0269 a0001c0001t0002g0270 a0001c0001t0002g0271 a0001c0001t0002g0273 a0001c0001t0002g0274 a0001c0001t0002g0275 a0001c0001t0002g0277 a0001c0001t0002g0278 a0001c0001t0002g0279 a0001c0001t0002g0280 a0001c0001t0002g0281 a0001c0001t0002g0282 a0001c0001t0002g0283 a0001c0001t0004g0028 a0001c0001t0004g0029 a0001c0001t0004g0031 a0001c0001t0004g0071 a0001c0001t0004g0072 a0001c0001t0004g0073 a0001c0001t0004g0103 a0001c0001t0004g0104 a0001c0001t0004g0105 a0001c0001t0004g0106 a0001c0001t0004g0107 a0001c0001t0004g0109 a0001c0001t0004g0110 a0001c0001t0004g0111 a0001c0001t0006g0223 a0001c0001t0006g0225 a0001c0001t0006g0226 a0001c0001t0006g0227 a0001c0001t0006g0233 a0001c0001t0006g0234 a0001c0001t0007g0001 a0001c0001t0007g0005 a0001c0001t0007g0007 a0001c0001t0008g0197 a0001c0001t0008g0229 a0001c0001t0008g0230 a0001c0001t0008g0231 a0001c0001t0010g0232 a0001c0001t0012g0004 a0001c0001t0014g0276 a0001c0001t0016g0228 a0001c0001t0017g0272 a0001c0001t0018g0108 a0001c0001t0019g0100 a0002c0002t0003g0209 a0002c0002t0009g0224	77	296	0.2601	-10	c.307 others(29): Show c.307+44906_307+44915delCCTTGCCTTG	SKAP2	ENSG00000005020.13	transcript	ENST00000345317.7	protein_coding	4/12			chr7	TogoVar
SKAP2_chr7_26662068_26869590	26819560	AAAGTATA others(3): Show AAAGTATACTT	A A	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00438.hp2 HG00642.hp2 others(53): Show HG00423.hp1 HG00438.hp2 HG00642.hp2 HG01099.hp2 HG01243.hp2 HG01255.hp1 HG01261.hp2 HG01361.hp2 HG01516.hp1 HG01517.hp1 HG01884.hp1 HG02040.hp1 HG02055.hp2 HG02071.hp2 HG02109.hp2 HG02132.hp1 HG02155.hp1 HG02165.hp2 HG02257.hp2 HG02280.hp2 HG02486.hp1 HG02622.hp1 HG02717.hp1 HG02809.hp2 HG02818.hp1 HG03490.hp2 HG03492.hp2 HG03540.hp1 HG03710.hp1 HG04199.hp1 HG04228.hp1 HG06807.hp2 NA18941.hp1 NA18943.hp2 NA18946.hp2 NA18948.hp2 NA18953.hp1 NA18962.hp1 NA18965.hp2 NA18967.hp1 NA18972.hp1 NA18978.hp2 NA18987.hp2 NA18988.hp2 NA18989.hp2 NA18990.hp1 NA18992.hp2 NA19011.hp2 NA19057.hp2 NA19063.hp1 NA19064.hp2 NA19068.hp1 NA19080.hp2 NA19081.hp1 NA20129.hp1 NA20805.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0001c0001t0006 a0001c0001t0008 others(7): Show a0001c0001t0002 a0001c0001t0006 a0001c0001t0008 a0001c0001t0010 a0001c0001t0012 a0001c0001t0014 a0001c0001t0016 a0001c0001t0017 a0002c0002t0003 a0002c0002t0009	a0001c0001t0002g0003 a0001c0001t0002g0207 a0001c0001t0002g0208 others(52): Show a0001c0001t0002g0003 a0001c0001t0002g0207 a0001c0001t0002g0208 a0001c0001t0002g0244 a0001c0001t0002g0245 a0001c0001t0002g0246 a0001c0001t0002g0247 a0001c0001t0002g0248 a0001c0001t0002g0249 a0001c0001t0002g0250 a0001c0001t0002g0251 a0001c0001t0002g0255 a0001c0001t0002g0256 a0001c0001t0002g0257 a0001c0001t0002g0258 a0001c0001t0002g0259 a0001c0001t0002g0260 a0001c0001t0002g0261 a0001c0001t0002g0262 a0001c0001t0002g0263 a0001c0001t0002g0264 a0001c0001t0002g0265 a0001c0001t0002g0266 a0001c0001t0002g0267 a0001c0001t0002g0268 a0001c0001t0002g0269 a0001c0001t0002g0270 a0001c0001t0002g0271 a0001c0001t0002g0273 a0001c0001t0002g0274 a0001c0001t0002g0275 a0001c0001t0002g0277 a0001c0001t0002g0278 a0001c0001t0002g0279 a0001c0001t0002g0280 a0001c0001t0002g0281 a0001c0001t0002g0282 a0001c0001t0002g0283 a0001c0001t0006g0223 a0001c0001t0006g0225 a0001c0001t0006g0226 a0001c0001t0006g0227 a0001c0001t0006g0233 a0001c0001t0006g0234 a0001c0001t0008g0197 a0001c0001t0008g0229 a0001c0001t0008g0230 a0001c0001t0008g0231 a0001c0001t0010g0232 a0001c0001t0012g0004 a0001c0001t0014g0276 a0001c0001t0016g0228 a0001c0001t0017g0272 a0002c0002t0003g0209 a0002c0002t0009g0224	56	296	0.1892	-10	c.307 others(29): Show c.307+24460_307+24469delAAGTATACTT	SKAP2	ENSG00000005020.13	transcript	ENST00000345317.7	protein_coding	4/12			chr7	TogoVar
SKAP2_chr7_26662068_26869590	26867616	TATATATA others(3): Show TATATATATAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00423.hp1 HG00438.hp2 HG00642.hp2 others(38): Show HG00423.hp1 HG00438.hp2 HG00642.hp2 HG01099.hp2 HG01261.hp2 HG01516.hp1 HG01517.hp1 HG01884.hp1 HG02040.hp1 HG02071.hp2 HG02132.hp1 HG02155.hp1 HG02165.hp2 HG02809.hp2 HG03490.hp2 HG03492.hp2 HG03710.hp1 HG04228.hp1 NA18941.hp1 NA18943.hp2 NA18946.hp2 NA18948.hp2 NA18953.hp1 NA18962.hp1 NA18965.hp2 NA18967.hp1 NA18972.hp1 NA18978.hp2 NA18987.hp2 NA18988.hp2 NA18989.hp2 NA18990.hp1 NA18992.hp2 NA19011.hp2 NA19057.hp2 NA19063.hp1 NA19064.hp2 NA19068.hp1 NA19080.hp2 NA19081.hp1 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0012 a0001c0001t0014 others(1): Show a0001c0001t0002 a0001c0001t0012 a0001c0001t0014 a0001c0001t0017	a0001c0001t0002g0003 a0001c0001t0002g0207 a0001c0001t0002g0208 others(37): Show a0001c0001t0002g0003 a0001c0001t0002g0207 a0001c0001t0002g0208 a0001c0001t0002g0244 a0001c0001t0002g0245 a0001c0001t0002g0246 a0001c0001t0002g0247 a0001c0001t0002g0248 a0001c0001t0002g0249 a0001c0001t0002g0250 a0001c0001t0002g0251 a0001c0001t0002g0255 a0001c0001t0002g0256 a0001c0001t0002g0257 a0001c0001t0002g0258 a0001c0001t0002g0259 a0001c0001t0002g0260 a0001c0001t0002g0261 a0001c0001t0002g0262 a0001c0001t0002g0263 a0001c0001t0002g0264 a0001c0001t0002g0265 a0001c0001t0002g0266 a0001c0001t0002g0267 a0001c0001t0002g0268 a0001c0001t0002g0269 a0001c0001t0002g0270 a0001c0001t0002g0271 a0001c0001t0002g0273 a0001c0001t0002g0274 a0001c0001t0002g0275 a0001c0001t0002g0277 a0001c0001t0002g0278 a0001c0001t0002g0279 a0001c0001t0002g0280 a0001c0001t0002g0281 a0001c0001t0002g0282 a0001c0001t0012g0004 a0001c0001t0014g0276 a0001c0001t0017g0272	41	296	0.1385	-10	c.-31 others(21): Show c.-3197_-3188delGTATATATAT	SKAP2	ENSG00000005020.13	transcript	ENST00000345317.7	protein_coding		3027		chr7	TogoVar
SKIC2_chr6_31954175_31974751	31964125	GGTGCGTC others(3): Show GGTGCGTCTGT	G G	intron_variant intron_variant	MODIFIER	HG02056.hp2 HG02056.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0039 a0002c0002t0001g0039	1	453	0.0022	-10	c.186 others(25): Show c.1860+17_1860+26delCTGTGTGCGT	SKIC2	ENSG00000204351.13	transcript	ENST00000375394.7	protein_coding	16/27		INFO_REALIGN_3_PRIME	chr6	TogoVar
SKIC3_chr5_95458894_95559977	95492642	AAAAAAAA others(3): Show AAAAAAAAAAG	A A	intron_variant intron_variant	MODIFIER	HG02027.hp1 HG02486.hp2 HG03490.hp2 others(5): Show HG02027.hp1 HG02486.hp2 HG03490.hp2 NA18955.hp1 NA18972.hp1 NA19070.hp2 NA19079.hp2 NA19083.hp2	a0002 a0017 a0018 a0002 a0017 a0018	a0002c0002 a0017c0024 a0018c0021 a0002c0002 a0017c0024 a0018c0021	a0002c0002t0002 a0017c0024t0002 a0018c0021t0002 a0002c0002t0002 a0017c0024t0002 a0018c0021t0002	a0002c0002t0002g0052 a0002c0002t0002g0057 a0002c0002t0002g0058 others(5): Show a0002c0002t0002g0052 a0002c0002t0002g0057 a0002c0002t0002g0058 a0002c0002t0002g0065 a0002c0002t0002g0073 a0002c0002t0002g0078 a0017c0024t0002g0041 a0018c0021t0002g0061	8	352	0.0227	-10	c.380 others(29): Show c.3803-1616_3803-1607delCTTTTTTTTT	SKIC3	ENSG00000198677.13	transcript	ENST00000358746.7	protein_coding	36/42			chr5	TogoVar
SKIC3_chr5_95458894_95559977	95492652	GAAAAAAA others(3): Show GAAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	NA18966.hp2 NA19090.hp1 NA18966.hp2 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0270 a0001c0001t0001g0271 a0001c0001t0001g0270 a0001c0001t0001g0271	2	352	0.0057	-10	c.380 others(29): Show c.3803-1626_3803-1617delTTTTTTTTTT	SKIC3	ENSG00000198677.13	transcript	ENST00000358746.7	protein_coding	36/42			chr5	TogoVar
SKIC8_chr15_78278235_78304609	78280819	CCCCTAGC others(3): Show CCCCTAGCAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18941.hp2 NA19070.hp1 NA18941.hp2 NA19070.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0006	2	436	0.0046	-10	c.26 others(21): Show c.2603_*2612delTTTGCTAGGG	SKIC8	ENSG00000140395.9	transcript	ENST00000267973.7	protein_coding		2415		chr15	TogoVar
SKIDA1_chr10_21508475_21530682	21508522	CTGTGTGT others(3): Show CTGTGTGTGTG	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02145.hp2 HG02258.hp2 HG02280.hp2 others(5): Show HG02145.hp2 HG02258.hp2 HG02280.hp2 HG02965.hp1 HG03041.hp2 HG03209.hp2 HG03654.hp2 NA20300.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0006 a0002c0008 others(1): Show a0001c0001 a0001c0006 a0002c0008 a0003c0005	a0001c0001t0001 a0001c0001t0004 a0001c0001t0048 others(3): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0048 a0001c0006t0035 a0002c0008t0041 a0003c0005t0003	a0001c0001t0001g0010 a0001c0001t0001g0154 a0001c0001t0004g0122 others(4): Show a0001c0001t0001g0010 a0001c0001t0001g0154 a0001c0001t0004g0122 a0001c0001t0048g0064 a0001c0006t0035g0111 a0002c0008t0041g0109 a0003c0005t0003g0001	8	230	0.0348	-10	c.65 others(21): Show c.6564_*6573delCACACACACA	SKIDA1	ENSG00000180592.17	transcript	ENST00000449193.7	protein_coding		4952		chr10	TogoVar
SKIDA1_chr10_21508475_21530682	21510753	GTTTTTTT others(3): Show GTTTTTTTTTT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01884.hp1 HG02818.hp2 HG03098.hp1 HG01884.hp1 HG02818.hp2 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0045 a0001c0001t0009 a0001c0001t0045	a0001c0001t0009g0028 a0001c0001t0009g0106 a0001c0001t0045g0161 a0001c0001t0009g0028 a0001c0001t0009g0106 a0001c0001t0045g0161	3	230	0.0130	-10	c.43 others(21): Show c.4333_*4342delAAAAAAAAAA	SKIDA1	ENSG00000180592.17	transcript	ENST00000449193.7	protein_coding		2721		chr10	TogoVar
SKIDA1_chr10_21508475_21530682	21522266	ACCCCCCC others(3): Show ACCCCCCCCCC	A A	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG01261.hp2 HG01516.hp1 others(1): Show HG00639.hp1 HG01261.hp2 HG01516.hp1 HG01517.hp1	a0001 a0010 a0001 a0010	a0001c0001 a0010c0013 a0001c0001 a0010c0013	a0001c0001t0002 a0010c0013t0002 a0001c0001t0002 a0010c0013t0002	a0001c0001t0002g0006 a0001c0001t0002g0162 a0010c0013t0002g0113 a0001c0001t0002g0006 a0001c0001t0002g0162 a0010c0013t0002g0113	4	230	0.0174	-10	c.-19 others(29): Show c.-1928-796_-1928-787delGGGGGGGGGG	SKIDA1	ENSG00000180592.17	transcript	ENST00000449193.7	protein_coding	2/3			chr10	TogoVar
SKIL_chr3_170352715_170401835	170400723	CTCCCTCT others(3): Show CTCCCTCTCTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02895.hp1 HG02895.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0198 a0001c0001t0001g0198	1	362	0.0028	-10	c.83 others(21): Show c.8307_*8316delTCCCTCTCTT	SKIL	ENSG00000136603.15	transcript	ENST00000259119.9	protein_coding		3889		chr3	TogoVar
SKI_chr1_2223319_2315213	2241949	CTGTGTGT others(3): Show CTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0322 a0001c0001t0002g0322	1	330	0.0030	-10	c.969 others(29): Show c.969+12227_969+12236delTGTGTGTGTG	SKI	ENSG00000157933.11	transcript	ENST00000378536.5	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
SKI_chr1_2223319_2315213	2260535	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG00544.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0154 a0001c0001t0002g0154	1	330	0.0030	-10	c.969 others(29): Show c.969+30814_969+30823delTTTTTTTTTT	SKI	ENSG00000157933.11	transcript	ENST00000378536.5	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
SKP1_chr5_134143935_134181950	134166580	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA20752.hp2 NA20752.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0196 a0001c0001t0003g0196	1	360	0.0028	-10	c.171 others(25): Show c.171+580_171+589delTTTTTTTTTT	SKP1	ENSG00000113558.19	transcript	ENST00000353411.11	protein_coding	3/5			chr5	TogoVar
SKP2_chr5_36147111_36189319	36153213	GATATATA others(3): Show GATATATATAT	G G	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp2 HG00544.hp1 others(11): Show HG00099.hp2 HG00280.hp2 HG00544.hp1 HG00738.hp2 HG00741.hp1 HG01192.hp1 HG01255.hp1 HG02071.hp1 HG02486.hp1 HG02922.hp1 HG03098.hp2 HG03453.hp1 NA18946.hp2 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0007 a0001c0001t0026 a0001c0002t0003 a0001c0002t0005	a0001c0001t0001g0156 a0001c0001t0002g0159 a0001c0001t0003g0043 others(10): Show a0001c0001t0001g0156 a0001c0001t0002g0159 a0001c0001t0003g0043 a0001c0001t0003g0161 a0001c0001t0003g0162 a0001c0001t0004g0160 a0001c0001t0006g0152 a0001c0001t0007g0153 a0001c0001t0007g0155 a0001c0001t0026g0154 a0001c0002t0003g0157 a0001c0002t0003g0158 a0001c0002t0005g0163	14	402	0.0348	-10	c.280 others(25): Show c.280+192_280+201delATATATATAT	SKP2	ENSG00000145604.17	transcript	ENST00000274255.11	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr5	TogoVar
SLA2_chr20_36607318_36651196	36609096	TCCCGCTT others(3): Show TCCCGCTTGGG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18960.hp1 NA18960.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0041 a0001c0001t0001g0041	1	360	0.0028	-10	c.47 others(21): Show c.4760_*4769delCCCAAGCGGG	SLA2	ENSG00000101082.14	transcript	ENST00000262866.9	protein_coding		3221		chr20	TogoVar
SLA2_chr20_36607318_36651196	36609193	ACGCACAC others(3): Show ACGCACACACG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp2 HG02602.hp1 HG03471.hp1 others(2): Show HG00280.hp2 HG02602.hp1 HG03471.hp1 NA18952.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0029 a0001c0001t0001g0032 a0001c0001t0001g0102 others(2): Show a0001c0001t0001g0029 a0001c0001t0001g0032 a0001c0001t0001g0102 a0001c0001t0001g0233 a0001c0001t0001g0279	5	360	0.0139	-10	c.46 others(21): Show c.4663_*4672delCGTGTGTGCG	SLA2	ENSG00000101082.14	transcript	ENST00000262866.9	protein_coding		3124		chr20	TogoVar
SLA2_chr20_36607318_36651196	36637193	ATTTTTTT others(3): Show ATTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01346.hp2 HG01346.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0016 a0001c0001t0003g0016	1	360	0.0028	-10	c.92- others(25): Show c.92-2614_92-2605delAAAAAAAAAA	SLA2	ENSG00000101082.14	transcript	ENST00000262866.9	protein_coding	2/7			chr20	TogoVar
SLA2_chr20_36607318_36651196	36638318	TTTTTGTT others(3): Show TTTTTGTTTTG	T T	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02886.hp2 HG02895.hp2 others(5): Show HG02055.hp1 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG02922.hp1 HG03098.hp1 HG03453.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0005 a0002c0002 a0001c0001 a0001c0005 a0002c0002	a0001c0001t0001 a0001c0001t0006 a0001c0005t0010 others(1): Show a0001c0001t0001 a0001c0001t0006 a0001c0005t0010 a0002c0002t0004	a0001c0001t0001g0169 a0001c0001t0001g0335 a0001c0001t0006g0338 others(5): Show a0001c0001t0001g0169 a0001c0001t0001g0335 a0001c0001t0006g0338 a0001c0001t0006g0339 a0001c0005t0010g0341 a0002c0002t0004g0243 a0002c0002t0004g0334 a0002c0002t0004g0340	8	360	0.0222	-10	c.91+ others(25): Show c.91+2917_91+2926delCAAAACAAAA	SLA2	ENSG00000101082.14	transcript	ENST00000262866.9	protein_coding	2/7			chr20	TogoVar
SLAIN2_chr4_48336529_48431201	48412365	TACACACA others(3): Show TACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0155 a0001c0001t0001g0155	1	348	0.0029	-10	c.136 others(29): Show c.1361-7718_1361-7709delCACACACACA	SLAIN2	ENSG00000109171.15	transcript	ENST00000264313.11	protein_coding	6/7		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLAIN2_chr4_48336529_48431201	48412407	CACACACA others(3): Show CACACACACAT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00733.hp1 HG01257.hp2 others(4): Show HG00099.hp1 HG00733.hp1 HG01257.hp2 HG02258.hp1 HG03017.hp2 HG03130.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0029 a0001c0001t0003 a0001c0001t0029	a0001c0001t0003g0166 a0001c0001t0003g0187 a0001c0001t0003g0188 others(4): Show a0001c0001t0003g0166 a0001c0001t0003g0187 a0001c0001t0003g0188 a0001c0001t0003g0193 a0001c0001t0003g0206 a0001c0001t0003g0208 a0001c0001t0029g0163	7	348	0.0201	-10	c.136 others(29): Show c.1361-7717_1361-7708delACACACACAT	SLAIN2	ENSG00000109171.15	transcript	ENST00000264313.11	protein_coding	6/7			chr4	TogoVar
SLAMF1_chr1_160603106_160652044	160621855	CGTGTGTG others(3): Show CGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02717.hp1 NA18906.hp1 HG02451.hp2 HG02717.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0256 a0001c0001t0005g0257 a0001c0001t0005g0258 a0001c0001t0005g0256 a0001c0001t0005g0257 a0001c0001t0005g0258	3	420	0.0071	-10	c.791 others(27): Show c.791-2016_791-2007delACACACACAC	SLAMF1	ENSG00000117090.16	transcript	ENST00000302035.11	protein_coding	4/6			chr1	TogoVar
SLAMF1_chr1_160603106_160652044	160640325	CATATATA others(3): Show CATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG03491.hp2 HG04184.hp2 HG03491.hp2 HG04184.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0002c0002t0003 a0001c0001t0002 a0002c0002t0003	a0001c0001t0002g0113 a0002c0002t0003g0043 a0001c0001t0002g0113 a0002c0002t0003g0043	2	420	0.0048	-10	c.77- others(25): Show c.77-2806_77-2797delATATATATAT	SLAMF1	ENSG00000117090.16	transcript	ENST00000302035.11	protein_coding	1/6			chr1	TogoVar
SLAMF1_chr1_160603106_160652044	160647760	ATATGTGT others(3): Show ATATGTGTGTG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01928.hp1 HG01952.hp2 HG01981.hp2 others(4): Show HG01928.hp1 HG01952.hp2 HG01981.hp2 HG02257.hp1 NA18972.hp2 NA19060.hp1 NA19078.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0011 a0001c0001t0039	a0001c0001t0001g0302 a0001c0001t0001g0311 a0001c0001t0001g0313 others(4): Show a0001c0001t0001g0302 a0001c0001t0001g0311 a0001c0001t0001g0313 a0001c0001t0002g0312 a0001c0001t0003g0291 a0001c0001t0011g0281 a0001c0001t0039g0394	7	420	0.0167	-10	c.-82 others(19): Show c.-825_-816delCACACACATA	SLAMF1	ENSG00000117090.16	transcript	ENST00000302035.11	protein_coding		717		chr1	TogoVar
SLAMF1_chr1_160603106_160652044	160647762	ATGTGTGT others(3): Show ATGTGTGTGTG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00673.hp1 HG03831.hp1 NA20129.hp1 others(1): Show HG00673.hp1 HG03831.hp1 NA20129.hp1 NA20805.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0006 a0002c0002t0001 a0002c0002t0006	a0002c0002t0001g0003 a0002c0002t0001g0004 a0002c0002t0006g0040 a0002c0002t0001g0003 a0002c0002t0001g0004 a0002c0002t0006g0040	4	420	0.0095	-10	c.-82 others(19): Show c.-827_-818delCACACACACA	SLAMF1	ENSG00000117090.16	transcript	ENST00000302035.11	protein_coding		719		chr1	TogoVar
SLAMF6_chr1_160480036_160528255	160483787	TCACAGAA others(3): Show TCACAGAAGCC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19004.hp2 NA19004.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0257 a0001c0001t0001g0257	1	394	0.0025	-10	c.29 others(21): Show c.2910_*2919delGGCTTCTGTG	SLAMF6	ENSG00000162739.14	transcript	ENST00000368057.8	protein_coding		1248		chr1	TogoVar
SLAMF6_chr1_160480036_160528255	160484211	TTATATAT others(3): Show TTATATATATA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01516.hp2 HG01517.hp2 HG02257.hp1 others(7): Show HG01516.hp2 HG01517.hp2 HG02257.hp1 HG02486.hp2 HG02615.hp2 HG02647.hp2 HG02896.hp1 HG03041.hp2 HG03453.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0012 a0001c0001t0001g0225 a0001c0001t0002g0055 others(6): Show a0001c0001t0001g0012 a0001c0001t0001g0225 a0001c0001t0002g0055 a0001c0001t0002g0058 a0001c0001t0002g0071 a0001c0001t0002g0268 a0001c0001t0002g0288 a0001c0001t0002g0291 a0001c0001t0002g0293	10	394	0.0254	-10	c.24 others(21): Show c.2486_*2495delTATATATATA	SLAMF6	ENSG00000162739.14	transcript	ENST00000368057.8	protein_coding		824		chr1	TogoVar
SLAMF6_chr1_160480036_160528255	160484235	ATATATAT others(3): Show ATATATATATT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02451.hp1 HG03139.hp2 HG02451.hp1 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0051 a0001c0001t0002g0238 a0001c0001t0002g0051 a0001c0001t0002g0238	2	394	0.0051	-10	c.24 others(21): Show c.2462_*2471delAATATATATA	SLAMF6	ENSG00000162739.14	transcript	ENST00000368057.8	protein_coding		800		chr1	TogoVar
SLAMF7_chr1_160734247_160759821	160751816	ATCTCTCT others(3): Show ATCTCTCTCTC	A A	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00673.hp1 HG02698.hp1 HG00423.hp1 HG00673.hp1 HG02698.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0002 a0001c0001t0003	a0001c0001t0002g0204 a0001c0001t0002g0215 a0001c0001t0003g0120 a0001c0001t0002g0204 a0001c0001t0002g0215 a0001c0001t0003g0120	3	440	0.0068	-10	c.874 others(25): Show c.874-332_874-323delCTCTCTCTCT	SLAMF7	ENSG00000026751.17	transcript	ENST00000368043.8	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
SLAMF7_chr1_160734247_160759821	160751854	CTCTCTCT others(3): Show CTCTCTCTCTA	C C	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG02129.hp1 HG00642.hp1 HG02129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0059 a0001c0001t0002g0059	2	440	0.0046	-10	c.874 others(25): Show c.874-330_874-321delCTCTCTCTAT	SLAMF7	ENSG00000026751.17	transcript	ENST00000368043.8	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
SLAMF7_chr1_160734247_160759821	160751856	CTCTCTCT others(3): Show CTCTCTCTATA	C C	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02895.hp2 HG03041.hp1 others(1): Show HG01243.hp2 HG02895.hp2 HG03041.hp1 NA18994.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0003 a0001c0001t0004	a0001c0001t0003g0038 a0001c0001t0003g0206 a0001c0001t0004g0259 a0001c0001t0003g0038 a0001c0001t0003g0206 a0001c0001t0004g0259	4	440	0.0091	-10	c.874 others(25): Show c.874-328_874-319delCTCTCTATAT	SLAMF7	ENSG00000026751.17	transcript	ENST00000368043.8	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
SLAMF7_chr1_160734247_160759821	160751858	CTCTCTAT others(3): Show CTCTCTATATA	C C	intron_variant intron_variant	MODIFIER	HG01257.hp1 HG01515.hp2 HG01934.hp2 others(3): Show HG01257.hp1 HG01515.hp2 HG01934.hp2 HG02004.hp2 HG02922.hp1 NA18966.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004	a0001c0001t0002g0225 a0001c0001t0003g0022 a0001c0001t0004g0073 a0001c0001t0002g0225 a0001c0001t0003g0022 a0001c0001t0004g0073	6	440	0.0136	-10	c.874 others(25): Show c.874-326_874-317delCTCTATATAT	SLAMF7	ENSG00000026751.17	transcript	ENST00000368043.8	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
SLAMF7_chr1_160734247_160759821	160751860	CTCTATAT others(3): Show CTCTATATATA	C C	intron_variant intron_variant	MODIFIER	HG01106.hp1 NA18522.hp1 NA20129.hp1 HG01106.hp1 NA18522.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0013 a0001c0001t0002 a0001c0001t0004 a0001c0001t0013	a0001c0001t0002g0226 a0001c0001t0004g0254 a0001c0001t0013g0107 a0001c0001t0002g0226 a0001c0001t0004g0254 a0001c0001t0013g0107	3	440	0.0068	-10	c.874 others(25): Show c.874-324_874-315delCTATATATAT	SLAMF7	ENSG00000026751.17	transcript	ENST00000368043.8	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
SLAMF7_chr1_160734247_160759821	160751862	CTATATAT others(3): Show CTATATATATA	C C	intron_variant intron_variant	MODIFIER	HG01081.hp2 HG01891.hp2 HG03540.hp2 others(2): Show HG01081.hp2 HG01891.hp2 HG03540.hp2 HG06807.hp1 NA18994.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0003 a0001c0001t0004 a0003c0003t0004 a0001c0001t0003 a0001c0001t0004 a0003c0003t0004	a0001c0001t0003g0127 a0001c0001t0003g0129 a0001c0001t0004g0255 others(2): Show a0001c0001t0003g0127 a0001c0001t0003g0129 a0001c0001t0004g0255 a0001c0001t0004g0256 a0003c0003t0004g0281	5	440	0.0114	-10	c.874 others(25): Show c.874-293_874-284delTATATATATA	SLAMF7	ENSG00000026751.17	transcript	ENST00000368043.8	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr1	TogoVar
SLA_chr8_133031728_133107602	133039970	CACACACA others(3): Show CACACACACAT	C C	intron_variant intron_variant	MODIFIER	HG03490.hp1 HG03490.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0327 a0001c0001t0006g0327	1	344	0.0029	-10	c.617 others(23): Show c.617+18_617+27delATGTGTGTGT	SLA	ENSG00000155926.14	transcript	ENST00000338087.10	protein_coding	8/8			chr8	TogoVar
SLA_chr8_133031728_133107602	133055357	GCACGCGC others(3): Show GCACGCGCGCA	G G	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01496.hp2 HG01934.hp2 others(2): Show HG01243.hp2 HG01496.hp2 HG01934.hp2 HG02145.hp2 HG04199.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0280 a0001c0001t0001g0281 a0001c0001t0004g0304 others(2): Show a0001c0001t0001g0280 a0001c0001t0001g0281 a0001c0001t0004g0304 a0001c0001t0004g0305 a0001c0001t0004g0318	5	344	0.0145	-10	c.62- others(25): Show c.62-4452_62-4443delTGCGCGCGTG	SLA	ENSG00000155926.14	transcript	ENST00000338087.10	protein_coding	3/8			chr8	TogoVar
SLA_chr8_133031728_133107602	133065768	TAATAAAA others(3): Show TAATAAAATAA	T T	intron_variant intron_variant	MODIFIER	HG01993.hp1 HG01993.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0296 a0001c0001t0001g0296	1	344	0.0029	-10	c.-40 others(27): Show c.-40-5578_-40-5569delTTATTTTATT	SLA	ENSG00000155926.14	transcript	ENST00000338087.10	protein_coding	2/8			chr8	TogoVar
SLA_chr8_133031728_133107602	133087071	TACACACA others(3): Show TACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG00741.hp2 HG01074.hp1 others(21): Show HG00558.hp2 HG00741.hp2 HG01074.hp1 HG01192.hp1 HG01496.hp2 HG01891.hp1 HG01934.hp2 HG02132.hp1 HG02145.hp1 HG02683.hp2 HG02723.hp2 HG02809.hp1 HG02886.hp2 HG02896.hp1 HG02965.hp1 HG03540.hp1 HG03579.hp2 HG04199.hp1 NA18906.hp1 NA18952.hp1 NA18993.hp2 NA19058.hp2 NA19075.hp2 NA20300.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0004 a0002c0002 a0001c0001 a0001c0004 a0002c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(9): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0015 a0001c0001t0019 a0001c0001t0025 a0001c0004t0002 a0001c0004t0007 a0002c0002t0002	a0001c0001t0001g0154 a0001c0001t0001g0272 a0001c0001t0001g0273 others(21): Show a0001c0001t0001g0154 a0001c0001t0001g0272 a0001c0001t0001g0273 a0001c0001t0001g0274 a0001c0001t0001g0279 a0001c0001t0001g0292 a0001c0001t0003g0208 a0001c0001t0003g0242 a0001c0001t0003g0243 a0001c0001t0004g0304 a0001c0001t0004g0305 a0001c0001t0004g0318 a0001c0001t0005g0209 a0001c0001t0005g0210 a0001c0001t0005g0244 a0001c0001t0005g0249 a0001c0001t0007g0290 a0001c0001t0008g0293 a0001c0001t0015g0223 a0001c0001t0019g0253 a0001c0001t0025g0089 a0001c0004t0002g0291 a0001c0004t0007g0090 a0002c0002t0002g0268	24	344	0.0698	-10	c.-31 others(31): Show c.-318-11951_-318-11942delGTGTGTGTGT	SLA	ENSG00000155926.14	transcript	ENST00000338087.10	protein_coding	1/8			chr8	TogoVar
SLBP_chr4_1687731_1717319	1713715	GGAGAAAC others(3): Show GGAGAAACCCT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18981.hp1 NA18981.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0104 a0001c0002t0002g0104	1	376	0.0027	-10	c.-15 others(21): Show c.-1537_-1528delAGGGTTTCTC	SLBP	ENSG00000163950.13	transcript	ENST00000489418.6	protein_coding		1397		chr4	TogoVar
SLC10A1_chr14_69770416_69802241	69777596	TTTTTTTT others(3): Show TTTTTTTTTTA	T T	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01433.hp2 HG02970.hp2 others(3): Show HG01243.hp1 HG01433.hp2 HG02970.hp2 HG03139.hp2 NA19030.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0009 a0001c0001t0001g0084 a0001c0001t0001g0009 a0001c0001t0001g0084	6	340	0.0177	-10	c.943 others(25): Show c.943+727_943+736delTAAAAAAAAA	SLC10A1	ENSG00000100652.5	transcript	ENST00000216540.5	protein_coding	4/4			chr14	TogoVar
SLC10A2_chr13_103038998_103071417	103053081	GGTGTGTG others(3): Show GGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG00673.hp2 HG00733.hp1 others(32): Show HG00597.hp1 HG00673.hp2 HG00733.hp1 HG00735.hp1 HG01074.hp1 HG01081.hp2 HG01175.hp1 HG01884.hp1 HG02027.hp2 HG02451.hp2 HG02559.hp2 HG02572.hp2 HG02630.hp1 HG02630.hp2 HG02723.hp1 HG02738.hp1 HG02922.hp2 HG02970.hp1 HG02976.hp1 HG03130.hp1 HG03209.hp1 HG03209.hp2 HG03486.hp1 HG03490.hp1 HG03579.hp1 HG03669.hp1 HG03831.hp1 HG03927.hp1 HG06807.hp2 NA18951.hp1 NA18978.hp1 NA19043.hp1 NA19043.hp2 NA19087.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(6): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0010 a0001c0001t0018 a0001c0001t0019 a0001c0001t0020	a0001c0001t0001g0194 a0001c0001t0002g0016 a0001c0001t0002g0027 others(19): Show a0001c0001t0001g0194 a0001c0001t0002g0016 a0001c0001t0002g0027 a0001c0001t0002g0058 a0001c0001t0002g0110 a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0201 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0205 a0001c0001t0003g0196 a0001c0001t0004g0114 a0001c0001t0007g0034 a0001c0001t0007g0072 a0001c0001t0007g0144 a0001c0001t0010g0028 a0001c0001t0018g0163 a0001c0001t0019g0192 a0001c0001t0020g0195	35	428	0.0818	-10	c.497 others(25): Show c.497-383_497-374delACACACACAC	SLC10A2	ENSG00000125255.7	transcript	ENST00000245312.5	protein_coding	2/5			chr13	TogoVar

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