Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SLIT2_chr4_20246905_20625561	20518583	ATATATTT others(3): Show ATATATTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01358.hp2 HG01358.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0011 a0001c0002t0011	a0001c0002t0011g0220 a0001c0002t0011g0220	1	230	0.0044	-10	c.105 others(27): Show c.1059-797_1059-788delATATTTTTTT	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	11/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLIT2_chr4_20246905_20625561	20518587	ATTTTTTT others(3): Show ATTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0024 a0001c0002t0024	a0001c0002t0024g0009 a0001c0002t0024g0009	1	230	0.0044	-10	c.105 others(27): Show c.1059-769_1059-760delTTTTTTTTTT	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	11/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLIT2_chr4_20246905_20625561	20542853	TGTGTGTG others(3): Show TGTGTGTGTGC	T T	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00323.hp2 HG00408.hp1 others(29): Show HG00280.hp2 HG00323.hp2 HG00408.hp1 HG00423.hp2 HG00609.hp2 HG01070.hp1 HG01168.hp2 HG01243.hp2 HG01358.hp2 HG01516.hp1 HG01884.hp1 HG01934.hp1 HG02015.hp2 HG02698.hp2 HG02976.hp2 HG03195.hp2 HG03239.hp1 HG03453.hp2 HG03491.hp2 HG03492.hp2 HG03710.hp1 HG03942.hp1 HG04115.hp1 HG06807.hp1 NA18941.hp2 NA18942.hp2 NA18944.hp2 NA18975.hp2 NA18990.hp2 NA19030.hp1 NA20752.hp2 homoSapiens_chm13v2.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0001c0002 a0001c0005 others(3): Show a0001c0001 a0001c0002 a0001c0005 a0001c0008 a0001c0025 a0005c0017	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(21): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0012 a0001c0001t0015 a0001c0001t0019 a0001c0001t0031 a0001c0001t0047 a0001c0001t0074 a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 a0001c0002t0008 a0001c0002t0009 a0001c0002t0011 a0001c0002t0029 a0001c0002t0030 a0001c0002t0043 a0001c0002t0081 a0001c0005t0033 a0001c0008t0001 a0001c0025t0001 a0005c0017t0001	a0001c0001t0001g0036 a0001c0001t0001g0056 a0001c0001t0001g0122 others(29): Show a0001c0001t0001g0036 a0001c0001t0001g0056 a0001c0001t0001g0122 a0001c0001t0002g0123 a0001c0001t0003g0099 a0001c0001t0006g0145 a0001c0001t0012g0016 a0001c0001t0012g0022 a0001c0001t0015g0046 a0001c0001t0015g0097 a0001c0001t0019g0176 a0001c0001t0031g0015 a0001c0001t0047g0068 a0001c0001t0074g0018 a0001c0002t0001g0116 a0001c0002t0002g0047 a0001c0002t0002g0121 a0001c0002t0002g0125 a0001c0002t0004g0205 a0001c0002t0004g0208 a0001c0002t0008g0186 a0001c0002t0009g0102 a0001c0002t0011g0209 a0001c0002t0011g0220 a0001c0002t0029g0217 a0001c0002t0030g0200 a0001c0002t0043g0064 a0001c0002t0081g0048 a0001c0005t0033g0134 a0001c0008t0001g0138 a0001c0025t0001g0179 a0005c0017t0001g0040	32	230	0.1391	-10	c.227 others(27): Show c.2276+229_2276+238delTGTGTGTGCG	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	21/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLIT2_chr4_20246905_20625561	20605706	ATTTTATA others(3): Show ATTTTATATTT	A A	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG03130.hp2 HG03471.hp2 HG02258.hp1 HG03130.hp2 HG03471.hp2	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0006 a0001c0007t0057 a0001c0007t0065 a0001c0001t0006 a0001c0007t0057 a0001c0007t0065	a0001c0001t0006g0129 a0001c0007t0057g0007 a0001c0007t0065g0197 a0001c0001t0006g0129 a0001c0007t0057g0007 a0001c0007t0065g0197	3	230	0.0130	-10	c.369 others(29): Show c.3693-4305_3693-4296delTTTATATTTT	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	33/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLIT2_chr4_20246905_20625561	20605711	ATATTTTA others(3): Show ATATTTTATTT	A A	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG02717.hp2 HG03516.hp2 others(1): Show HG00642.hp1 HG02717.hp2 HG03516.hp2 NA19078.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0013 a0001c0002t0016 a0001c0002t0026 a0001c0001t0013 a0001c0002t0016 a0001c0002t0026	a0001c0001t0013g0172 a0001c0002t0016g0050 a0001c0002t0016g0126 others(1): Show a0001c0001t0013g0172 a0001c0002t0016g0050 a0001c0002t0016g0126 a0001c0002t0026g0011	4	230	0.0174	-10	c.369 others(29): Show c.3693-4260_3693-4251delATTTTATTTT	SLIT2	ENSG00000145147.20	transcript	ENST00000504154.6	protein_coding	33/36		INFO_REALIGN_3_PRIME	chr4	TogoVar
SLIT3_chr5_168656740_169306139	168703226	TTGTGTGT others(3): Show TTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG02135.hp2 HG02615.hp2 HG02895.hp2 others(2): Show HG02135.hp2 HG02615.hp2 HG02895.hp2 HG02897.hp1 HG04115.hp1	a0001 a0002 a0001 a0002	a0001c0004 a0001c0014 a0002c0008 a0001c0004 a0001c0014 a0002c0008	a0001c0004t0014 a0001c0004t0019 a0001c0014t0009 others(1): Show a0001c0004t0014 a0001c0004t0019 a0001c0014t0009 a0002c0008t0002	a0001c0004t0014g0001 a0001c0004t0014g0002 a0001c0004t0019g0102 others(2): Show a0001c0004t0014g0001 a0001c0004t0014g0002 a0001c0004t0019g0102 a0001c0014t0009g0112 a0002c0008t0002g0023	5	132	0.0379	-10	c.284 others(29): Show c.2845-2557_2845-2548delCACACACACA	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	26/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	168718677	TACACACA others(3): Show TACACACACAC	T T	intron_variant intron_variant	MODIFIER	NA18747.hp2 NA18747.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0110 a0001c0001t0003g0110	1	132	0.0076	-10	c.248 others(29): Show c.2483+3569_2483+3578delGTGTGTGTGT	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	23/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	168735661	TACACACA others(3): Show TACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG03017.hp2 NA20129.hp2 HG03017.hp2 NA20129.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0036 a0001c0001 a0004c0036	a0001c0001t0025 a0004c0036t0010 a0001c0001t0025 a0004c0036t0010	a0001c0001t0025g0069 a0004c0036t0010g0129 a0001c0001t0025g0069 a0004c0036t0010g0129	2	132	0.0152	-10	c.227 others(31): Show c.2271-11187_2271-11178delGTGTGTGTGT	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	20/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	168746477	GGTGTGGT others(3): Show GGTGTGGTGGT	G G	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG01192.hp1 HG01192.hp2 others(21): Show HG00735.hp2 HG01192.hp1 HG01192.hp2 HG01433.hp1 HG01496.hp2 HG01993.hp2 HG02135.hp1 HG02451.hp2 HG02486.hp2 HG02615.hp1 HG02717.hp1 HG03017.hp1 HG03834.hp1 HG03834.hp2 HG03927.hp2 HG04115.hp2 NA18747.hp2 NA18970.hp2 NA18974.hp2 NA18989.hp2 NA19012.hp1 NA19056.hp1 NA19060.hp2 NA19066.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0004 a0006	a0001c0001 a0001c0003 a0001c0006 others(13): Show a0001c0001 a0001c0003 a0001c0006 a0001c0007 a0001c0009 a0001c0014 a0001c0054 a0001c0058 a0001c0059 a0002c0011 a0002c0043 a0002c0060 a0003c0033 a0003c0056 a0004c0025 a0006c0034	a0001c0001t0001 a0001c0001t0003 a0001c0003t0004 others(16): Show a0001c0001t0001 a0001c0001t0003 a0001c0003t0004 a0001c0003t0007 a0001c0006t0002 a0001c0007t0001 a0001c0009t0001 a0001c0009t0013 a0001c0014t0002 a0001c0054t0002 a0001c0058t0009 a0001c0059t0004 a0002c0011t0007 a0002c0043t0028 a0002c0060t0001 a0003c0033t0007 a0003c0056t0001 a0004c0025t0006 a0006c0034t0012	a0001c0001t0001g0006 a0001c0001t0001g0018 a0001c0001t0001g0019 others(21): Show a0001c0001t0001g0006 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0025 a0001c0001t0001g0092 a0001c0001t0003g0099 a0001c0001t0003g0110 a0001c0003t0004g0045 a0001c0003t0007g0098 a0001c0006t0002g0039 a0001c0007t0001g0095 a0001c0009t0001g0058 a0001c0009t0013g0056 a0001c0014t0002g0028 a0001c0054t0002g0044 a0001c0058t0009g0097 a0001c0059t0004g0027 a0002c0011t0007g0116 a0002c0043t0028g0052 a0002c0060t0001g0057 a0003c0033t0007g0108 a0003c0056t0001g0078 a0004c0025t0006g0013 a0006c0034t0012g0046	24	132	0.1818	-10	c.227 others(29): Show c.2270+1815_2270+1824delACCACCACAC	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	20/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	168746558	GGTGTGGT others(3): Show GGTGTGGTGGT	G G	intron_variant intron_variant	MODIFIER	NA18522.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0083 a0001c0001t0001g0083	1	132	0.0076	-10	c.227 others(29): Show c.2270+1734_2270+1743delACCACCACAC	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	20/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	168746872	GGTGTGGC others(3): Show GGTGTGGCGGT	G G	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG02896.hp1 NA19043.hp1 others(1): Show HG02886.hp2 HG02896.hp1 NA19043.hp1 NA21309.hp1	a0001 a0002 a0010 a0001 a0002 a0010	a0001c0009 a0002c0002 a0010c0023 a0001c0009 a0002c0002 a0010c0023	a0001c0009t0012 a0002c0002t0005 a0002c0002t0018 others(1): Show a0001c0009t0012 a0002c0002t0005 a0002c0002t0018 a0010c0023t0005	a0001c0009t0012g0035 a0002c0002t0005g0082 a0002c0002t0018g0105 others(1): Show a0001c0009t0012g0035 a0002c0002t0005g0082 a0002c0002t0018g0105 a0010c0023t0005g0085	4	132	0.0303	-10	c.227 others(29): Show c.2270+1420_2270+1429delACCGCCACAC	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	20/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	168746879	CGGTGTGT others(3): Show CGGTGTGTGGT	C C	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00735.hp1 HG01255.hp2 others(16): Show HG00408.hp1 HG00735.hp1 HG01255.hp2 HG02015.hp1 HG02135.hp2 HG02451.hp1 HG02486.hp1 HG02559.hp2 HG03017.hp2 NA18747.hp1 NA18957.hp1 NA18989.hp1 NA19007.hp1 NA19007.hp2 NA19012.hp2 NA19060.hp1 NA19066.hp2 NA19240.hp2 NA20129.hp2	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0014	a0001c0001 a0001c0003 a0001c0006 others(8): Show a0001c0001 a0001c0003 a0001c0006 a0001c0007 a0001c0009 a0001c0014 a0001c0037 a0001c0042 a0002c0021 a0004c0036 a0014c0064	a0001c0001t0001 a0001c0001t0003 a0001c0001t0025 others(12): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0025 a0001c0003t0016 a0001c0003t0032 a0001c0006t0002 a0001c0006t0035 a0001c0007t0015 a0001c0009t0003 a0001c0014t0009 a0001c0037t0013 a0001c0042t0034 a0002c0021t0026 a0004c0036t0010 a0014c0064t0015	a0001c0001t0001g0041 a0001c0001t0001g0072 a0001c0001t0001g0081 others(16): Show a0001c0001t0001g0041 a0001c0001t0001g0072 a0001c0001t0001g0081 a0001c0001t0003g0122 a0001c0001t0025g0069 a0001c0003t0016g0007 a0001c0003t0016g0074 a0001c0003t0032g0026 a0001c0006t0002g0043 a0001c0006t0002g0063 a0001c0006t0035g0120 a0001c0007t0015g0054 a0001c0009t0003g0117 a0001c0014t0009g0112 a0001c0037t0013g0021 a0001c0042t0034g0130 a0002c0021t0026g0055 a0004c0036t0010g0129 a0014c0064t0015g0024	19	132	0.1439	-10	c.227 others(29): Show c.2270+1413_2270+1422delACCACACACC	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	20/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	168777099	ACACACAC others(3): Show ACACACACCCC	A A	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01167.hp2 HG01993.hp1 others(9): Show HG01106.hp1 HG01167.hp2 HG01993.hp1 HG02071.hp1 HG02451.hp1 HG02622.hp1 HG02965.hp2 HG02976.hp2 HG03209.hp2 NA18747.hp2 NA19030.hp2 NA20129.hp2	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0013	a0001c0001 a0001c0003 a0001c0014 others(8): Show a0001c0001 a0001c0003 a0001c0014 a0001c0015 a0001c0016 a0001c0017 a0001c0042 a0002c0002 a0002c0019 a0004c0036 a0013c0027	a0001c0001t0003 a0001c0003t0017 a0001c0014t0009 others(8): Show a0001c0001t0003 a0001c0003t0017 a0001c0014t0009 a0001c0015t0017 a0001c0016t0038 a0001c0017t0001 a0001c0042t0034 a0002c0002t0008 a0002c0019t0001 a0004c0036t0010 a0013c0027t0010	a0001c0001t0003g0110 a0001c0003t0017g0050 a0001c0014t0009g0121 others(9): Show a0001c0001t0003g0110 a0001c0003t0017g0050 a0001c0014t0009g0121 a0001c0015t0017g0089 a0001c0016t0038g0132 a0001c0017t0001g0029 a0001c0017t0001g0062 a0001c0042t0034g0130 a0002c0002t0008g0022 a0002c0019t0001g0009 a0004c0036t0010g0129 a0013c0027t0010g0125	12	132	0.0909	-10	c.115 others(29): Show c.1152-2731_1152-2722delGGGGTGTGTG	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	12/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	168834686	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0001 a0001	a0001c0042 a0001c0042	a0001c0042t0034 a0001c0042t0034	a0001c0042t0034g0130 a0001c0042t0034g0130	1	132	0.0076	-10	c.557 others(27): Show c.557+9888_557+9897delTTTTTTTTTT	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	6/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	168897131	GACTACTA others(3): Show GACTACTATGT	G G	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00639.hp2 HG00735.hp1 others(95): Show HG00408.hp1 HG00639.hp2 HG00735.hp1 HG00735.hp2 HG01081.hp1 HG01081.hp2 HG01106.hp1 HG01106.hp2 HG01109.hp1 HG01109.hp2 HG01167.hp1 HG01167.hp2 HG01192.hp1 HG01255.hp1 HG01255.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01496.hp2 HG01934.hp1 HG01934.hp2 HG01993.hp1 HG01993.hp2 HG02015.hp1 HG02015.hp2 HG02027.hp2 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp2 HG02615.hp1 HG02622.hp1 HG02622.hp2 HG02717.hp1 HG02717.hp2 HG02735.hp1 HG02735.hp2 HG02886.hp1 HG02895.hp1 HG02965.hp1 HG02965.hp2 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03225.hp1 HG03486.hp1 HG03486.hp2 HG03516.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04115.hp2 NA18522.hp1 NA18522.hp2 NA18747.hp1 NA18747.hp2 NA18957.hp1 NA18957.hp2 NA18970.hp1 NA18970.hp2 NA18974.hp1 NA18974.hp2 NA18989.hp1 NA18989.hp2 NA19005.hp2 NA19007.hp1 NA19007.hp2 NA19012.hp1 NA19012.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA19056.hp2 NA19060.hp1 NA19060.hp2 NA19066.hp1 NA19066.hp2 NA20805.hp1 NA20805.hp2 NA21309.hp2	a0001 a0002 a0003 others(7): Show a0001 a0002 a0003 a0004 a0005 a0007 a0008 a0009 a0014 a0015	a0001c0001 a0001c0003 a0001c0004 others(48): Show a0001c0001 a0001c0003 a0001c0004 a0001c0006 a0001c0007 a0001c0009 a0001c0010 a0001c0013 a0001c0014 a0001c0015 a0001c0016 a0001c0017 a0001c0020 a0001c0037 a0001c0041 a0001c0042 a0001c0047 a0001c0048 a0001c0050 a0001c0054 a0001c0058 a0001c0059 a0002c0002 a0002c0005 a0002c0008 a0002c0011 a0002c0012 a0002c0018 a0002c0019 a0002c0021 a0002c0030 a0002c0043 a0002c0044 a0002c0046 a0002c0049 a0002c0053 a0002c0060 a0002c0061 a0002c0062 a0003c0033 a0003c0055 a0003c0056 a0003c0057 a0004c0025 a0004c0039 a0005c0063 a0007c0045 a0008c0035 a0009c0024 a0014c0064 a0015c0028	a0001c0001t0001 a0001c0001t0003 a0001c0001t0025 others(71): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0025 a0001c0003t0007 a0001c0003t0016 a0001c0003t0017 a0001c0003t0032 a0001c0004t0006 a0001c0004t0010 a0001c0006t0002 a0001c0006t0009 a0001c0006t0035 a0001c0007t0001 a0001c0007t0015 a0001c0009t0001 a0001c0009t0003 a0001c0009t0013 a0001c0010t0008 a0001c0013t0001 a0001c0014t0002 a0001c0014t0009 a0001c0015t0006 a0001c0015t0017 a0001c0016t0008 a0001c0016t0038 a0001c0017t0001 a0001c0020t0001 a0001c0020t0037 a0001c0037t0013 a0001c0041t0001 a0001c0042t0034 a0001c0047t0011 a0001c0048t0004 a0001c0050t0021 a0001c0054t0002 a0001c0058t0009 a0001c0059t0004 a0002c0002t0008 a0002c0002t0020 a0002c0002t0022 a0002c0002t0024 a0002c0002t0036 a0002c0005t0001 a0002c0005t0003 a0002c0005t0027 a0002c0008t0002 a0002c0011t0007 a0002c0012t0004 a0002c0012t0031 a0002c0018t0018 a0002c0019t0001 a0002c0021t0002 a0002c0021t0026 a0002c0030t0002 a0002c0043t0028 a0002c0044t0007 a0002c0046t0013 a0002c0049t0003 a0002c0053t0003 a0002c0060t0001 a0002c0061t0011 a0002c0062t0030 a0003c0033t0007 a0003c0055t0010 a0003c0056t0001 a0003c0057t0020 a0004c0025t0006 a0004c0039t0006 a0005c0063t0002 a0007c0045t0002 a0008c0035t0004 a0009c0024t0029 a0014c0064t0015 a0015c0028t0006	a0001c0001t0001g0006 a0001c0001t0001g0010 a0001c0001t0001g0018 others(95): Show a0001c0001t0001g0006 a0001c0001t0001g0010 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0025 a0001c0001t0001g0034 a0001c0001t0001g0041 a0001c0001t0001g0072 a0001c0001t0001g0081 a0001c0001t0001g0083 a0001c0001t0001g0090 a0001c0001t0001g0092 a0001c0001t0003g0099 a0001c0001t0003g0110 a0001c0001t0003g0122 a0001c0001t0025g0069 a0001c0003t0007g0098 a0001c0003t0016g0007 a0001c0003t0017g0050 a0001c0003t0032g0026 a0001c0004t0006g0060 a0001c0004t0010g0131 a0001c0006t0002g0039 a0001c0006t0002g0043 a0001c0006t0002g0063 a0001c0006t0009g0113 a0001c0006t0035g0120 a0001c0007t0001g0040 a0001c0007t0001g0095 a0001c0007t0015g0054 a0001c0009t0001g0058 a0001c0009t0003g0117 a0001c0009t0013g0056 a0001c0010t0008g0068 a0001c0010t0008g0071 a0001c0013t0001g0091 a0001c0013t0001g0094 a0001c0014t0002g0028 a0001c0014t0009g0112 a0001c0014t0009g0121 a0001c0015t0006g0070 a0001c0015t0017g0089 a0001c0016t0008g0080 a0001c0016t0038g0132 a0001c0017t0001g0029 a0001c0017t0001g0062 a0001c0020t0001g0073 a0001c0020t0037g0109 a0001c0037t0013g0021 a0001c0041t0001g0053 a0001c0042t0034g0130 a0001c0047t0011g0012 a0001c0048t0004g0064 a0001c0050t0021g0003 a0001c0054t0002g0044 a0001c0058t0009g0097 a0001c0059t0004g0027 a0002c0002t0008g0022 a0002c0002t0020g0119 a0002c0002t0022g0038 a0002c0002t0024g0086 a0002c0002t0036g0111 a0002c0005t0001g0016 a0002c0005t0003g0114 a0002c0005t0003g0118 a0002c0005t0003g0128 a0002c0005t0027g0030 a0002c0008t0002g0017 a0002c0008t0002g0023 a0002c0008t0002g0042 a0002c0011t0007g0116 a0002c0012t0004g0031 a0002c0012t0031g0077 a0002c0018t0018g0126 a0002c0019t0001g0009 a0002c0021t0002g0059 a0002c0021t0026g0055 a0002c0030t0002g0033 a0002c0043t0028g0052 a0002c0044t0007g0101 a0002c0046t0013g0061 a0002c0049t0003g0127 a0002c0053t0003g0123 a0002c0060t0001g0057 a0002c0061t0011g0051 a0002c0062t0030g0032 a0003c0033t0007g0108 a0003c0055t0010g0115 a0003c0056t0001g0078 a0003c0057t0020g0096 a0004c0025t0006g0013 a0004c0039t0006g0087 a0005c0063t0002g0036 a0007c0045t0002g0079 a0008c0035t0004g0049 a0009c0024t0029g0076 a0014c0064t0015g0024 a0015c0028t0006g0014	98	132	0.7424	-10	c.414 others(29): Show c.414-13805_414-13796delACATAGTAGT	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	168900615	CAAACAAA others(3): Show CAAACAAAACA	C C	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03486.hp2 HG03098.hp2 HG03486.hp2	a0001 a0001	a0001c0004 a0001c0048 a0001c0004 a0001c0048	a0001c0004t0010 a0001c0048t0004 a0001c0004t0010 a0001c0048t0004	a0001c0004t0010g0131 a0001c0048t0004g0064 a0001c0004t0010g0131 a0001c0048t0004g0064	2	132	0.0152	-10	c.414 others(29): Show c.414-17289_414-17280delTGTTTTGTTT	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	168932347	GACACACA others(3): Show GACACACACAC	G G	intron_variant intron_variant	MODIFIER	HG02027.hp2 HG03209.hp1 NA18974.hp1 others(1): Show HG02027.hp2 HG03209.hp1 NA18974.hp1 NA20805.hp1	a0001 a0002 a0008 a0001 a0002 a0008	a0001c0010 a0001c0013 a0002c0030 others(1): Show a0001c0010 a0001c0013 a0002c0030 a0008c0035	a0001c0010t0008 a0001c0013t0001 a0002c0030t0002 others(1): Show a0001c0010t0008 a0001c0013t0001 a0002c0030t0002 a0008c0035t0004	a0001c0010t0008g0068 a0001c0013t0001g0091 a0002c0030t0002g0033 others(1): Show a0001c0010t0008g0068 a0001c0013t0001g0091 a0002c0030t0002g0033 a0008c0035t0004g0049	4	132	0.0303	-10	c.414 others(29): Show c.414-49021_414-49012delGTGTGTGTGT	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	168994623	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG01255.hp2 HG03130.hp2 others(1): Show HG01255.hp1 HG01255.hp2 HG03130.hp2 HG03225.hp2	a0001 a0007 a0001 a0007	a0001c0001 a0001c0010 a0001c0047 others(1): Show a0001c0001 a0001c0010 a0001c0047 a0007c0045	a0001c0001t0001 a0001c0010t0033 a0001c0047t0011 others(1): Show a0001c0001t0001 a0001c0010t0033 a0001c0047t0011 a0007c0045t0002	a0001c0001t0001g0072 a0001c0010t0033g0103 a0001c0047t0011g0012 others(1): Show a0001c0001t0001g0072 a0001c0010t0033g0103 a0001c0047t0011g0012 a0007c0045t0002g0079	4	132	0.0303	-10	c.414 others(31): Show c.414-111297_414-111288delAAAAAAAAAA	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	168998702	TCAAAACA others(3): Show TCAAAACAAAA	T T	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0002 a0002	a0002c0029 a0002c0029	a0002c0029t0005 a0002c0029t0005	a0002c0029t0005g0015 a0002c0029t0005g0015	1	132	0.0076	-10	c.414 others(31): Show c.414-115376_414-115367delTTTTGTTTTG	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	169002322	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01993.hp2 NA20805.hp1 HG00639.hp2 HG01993.hp2 NA20805.hp1	a0001 a0001	a0001c0003 a0001c0010 a0001c0016 a0001c0003 a0001c0010 a0001c0016	a0001c0003t0007 a0001c0010t0008 a0001c0016t0008 a0001c0003t0007 a0001c0010t0008 a0001c0016t0008	a0001c0003t0007g0098 a0001c0010t0008g0068 a0001c0016t0008g0080 a0001c0003t0007g0098 a0001c0010t0008g0068 a0001c0016t0008g0080	3	132	0.0227	-10	c.414 others(31): Show c.414-118996_414-118987delTTTTTTTTTT	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	169006605	TCACACAC others(3): Show TCACACACACA	T T	intron_variant intron_variant	MODIFIER	HG03834.hp1 HG03834.hp1	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0001 a0001c0009t0001	a0001c0009t0001g0058 a0001c0009t0001g0058	1	132	0.0076	-10	c.414 others(31): Show c.414-123279_414-123270delTGTGTGTGTG	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	169015931	AACACACA others(3): Show AACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG02559.hp1 HG03130.hp2 others(4): Show HG01255.hp2 HG02559.hp1 HG03130.hp2 HG03209.hp1 HG03209.hp2 NA19030.hp1 NA21309.hp2	a0001 a0013 a0015 a0001 a0013 a0015	a0001c0001 a0001c0013 a0001c0015 others(3): Show a0001c0001 a0001c0013 a0001c0015 a0001c0047 a0013c0027 a0015c0028	a0001c0001t0001 a0001c0013t0001 a0001c0015t0006 others(3): Show a0001c0001t0001 a0001c0013t0001 a0001c0015t0006 a0001c0047t0011 a0013c0027t0010 a0015c0028t0006	a0001c0001t0001g0072 a0001c0013t0001g0047 a0001c0013t0001g0091 others(4): Show a0001c0001t0001g0072 a0001c0013t0001g0047 a0001c0013t0001g0091 a0001c0015t0006g0070 a0001c0047t0011g0012 a0013c0027t0010g0125 a0015c0028t0006g0014	7	132	0.0530	-10	c.414 others(31): Show c.414-132605_414-132596delGTGTGTGTGT	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	169015977	CACACACA others(3): Show CACACACACAA	C C	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00639.hp2 HG01993.hp2 others(4): Show HG00408.hp1 HG00639.hp2 HG01993.hp2 HG02015.hp1 HG02135.hp1 HG02965.hp2 NA18522.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0004 others(4): Show a0001c0001 a0001c0003 a0001c0004 a0001c0006 a0001c0016 a0001c0017 a0002c0021	a0001c0001t0003 a0001c0003t0007 a0001c0004t0006 others(4): Show a0001c0001t0003 a0001c0003t0007 a0001c0004t0006 a0001c0006t0035 a0001c0016t0008 a0001c0017t0001 a0002c0021t0026	a0001c0001t0003g0099 a0001c0003t0007g0098 a0001c0004t0006g0060 others(4): Show a0001c0001t0003g0099 a0001c0003t0007g0098 a0001c0004t0006g0060 a0001c0006t0035g0120 a0001c0016t0008g0080 a0001c0017t0001g0062 a0002c0021t0026g0055	7	132	0.0530	-10	c.414 others(31): Show c.414-132651_414-132642delTTGTGTGTGT	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	169034912	AGTGTGTG others(3): Show AGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0001 a0001	a0001c0010 a0001c0010	a0001c0010t0033 a0001c0010t0033	a0001c0010t0033g0103 a0001c0010t0033g0103	1	132	0.0076	-10	c.414 others(31): Show c.414-151586_414-151577delACACACACAC	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	169089019	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03927.hp1 HG04115.hp1 HG03927.hp1 HG04115.hp1	a0002 a0002	a0002c0008 a0002c0021 a0002c0008 a0002c0021	a0002c0008t0002 a0002c0021t0002 a0002c0008t0002 a0002c0021t0002	a0002c0008t0002g0023 a0002c0021t0002g0059 a0002c0008t0002g0023 a0002c0021t0002g0059	2	132	0.0152	-10	c.413 others(31): Show c.413+104450_413+104459delTTTTTTTTTT	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	169140308	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG01433.hp1 HG01934.hp2 others(20): Show HG01255.hp1 HG01433.hp1 HG01934.hp2 HG01993.hp2 HG02055.hp2 HG02129.hp2 HG02145.hp1 HG02145.hp2 HG02559.hp2 HG02622.hp1 HG02735.hp1 HG02896.hp1 HG02976.hp1 HG03017.hp1 HG03195.hp1 HG03195.hp2 HG03486.hp2 HG03834.hp2 NA18522.hp2 NA19005.hp2 NA19007.hp1 NA19012.hp1 NA19030.hp2	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0007 a0010	a0001c0001 a0001c0003 a0001c0004 others(13): Show a0001c0001 a0001c0003 a0001c0004 a0001c0020 a0001c0038 a0001c0048 a0001c0050 a0001c0054 a0002c0002 a0002c0012 a0002c0019 a0002c0043 a0002c0046 a0003c0055 a0007c0045 a0010c0023	a0001c0001t0001 a0001c0001t0003 a0001c0003t0007 others(17): Show a0001c0001t0001 a0001c0001t0003 a0001c0003t0007 a0001c0003t0016 a0001c0003t0017 a0001c0004t0006 a0001c0020t0001 a0001c0020t0037 a0001c0038t0011 a0001c0048t0004 a0001c0050t0021 a0001c0054t0002 a0002c0002t0019 a0002c0012t0031 a0002c0019t0001 a0002c0043t0028 a0002c0046t0013 a0003c0055t0010 a0007c0045t0002 a0010c0023t0005	a0001c0001t0001g0018 a0001c0001t0001g0025 a0001c0001t0003g0106 others(20): Show a0001c0001t0001g0018 a0001c0001t0001g0025 a0001c0001t0003g0106 a0001c0001t0003g0122 a0001c0003t0007g0098 a0001c0003t0016g0007 a0001c0003t0017g0050 a0001c0004t0006g0060 a0001c0020t0001g0073 a0001c0020t0037g0109 a0001c0038t0011g0066 a0001c0048t0004g0064 a0001c0050t0021g0003 a0001c0054t0002g0044 a0002c0002t0019g0107 a0002c0012t0031g0077 a0002c0019t0001g0009 a0002c0019t0001g0011 a0002c0043t0028g0052 a0002c0046t0013g0061 a0003c0055t0010g0115 a0007c0045t0002g0079 a0010c0023t0005g0085	23	132	0.1742	-10	c.413 others(29): Show c.413+53161_413+53170delTTTTTTTTTT	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	169140480	CAAAAAAA others(3): Show CAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA19060.hp2 NA19060.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0002 a0001c0006t0002	a0001c0006t0002g0039 a0001c0006t0002g0039	1	132	0.0076	-10	c.413 others(29): Show c.413+52989_413+52998delTTTTTTTTTT	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	169142074	AAAATAAA others(3): Show AAAATAAAAAT	A A	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG02615.hp1 HG02622.hp2 others(9): Show HG00639.hp1 HG02615.hp1 HG02622.hp2 HG02717.hp2 HG02886.hp1 HG02895.hp2 HG02897.hp1 HG02965.hp2 HG03195.hp1 HG03516.hp1 HG03834.hp2 NA19030.hp1	a0001 a0002 a0009 others(1): Show a0001 a0002 a0009 a0015	a0001c0001 a0001c0004 a0001c0017 others(5): Show a0001c0001 a0001c0004 a0001c0017 a0001c0032 a0002c0029 a0002c0044 a0009c0024 a0015c0028	a0001c0001t0001 a0001c0001t0003 a0001c0004t0014 others(6): Show a0001c0001t0001 a0001c0001t0003 a0001c0004t0014 a0001c0017t0001 a0001c0032t0001 a0002c0029t0005 a0002c0044t0007 a0009c0024t0029 a0015c0028t0006	a0001c0001t0001g0006 a0001c0001t0001g0010 a0001c0001t0001g0025 others(9): Show a0001c0001t0001g0006 a0001c0001t0001g0010 a0001c0001t0001g0025 a0001c0001t0003g0106 a0001c0004t0014g0001 a0001c0004t0014g0002 a0001c0017t0001g0062 a0001c0032t0001g0048 a0002c0029t0005g0015 a0002c0044t0007g0101 a0009c0024t0029g0076 a0015c0028t0006g0014	12	132	0.0909	-10	c.413 others(29): Show c.413+51395_413+51404delATTTTTATTT	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	169189527	GATATATA others(3): Show GATATATATAT	G G	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG02055.hp1 HG02145.hp1 others(9): Show HG01106.hp2 HG02055.hp1 HG02145.hp1 HG02486.hp1 HG02559.hp2 HG02976.hp2 HG03130.hp2 HG03225.hp1 HG03579.hp1 HG04115.hp2 NA19030.hp2 NA20129.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0003 a0001c0006 a0001c0015 others(7): Show a0001c0003 a0001c0006 a0001c0015 a0001c0026 a0001c0038 a0001c0047 a0001c0051 a0002c0005 a0002c0049 a0003c0056	a0001c0003t0016 a0001c0003t0017 a0001c0006t0002 others(8): Show a0001c0003t0016 a0001c0003t0017 a0001c0006t0002 a0001c0015t0017 a0001c0026t0004 a0001c0038t0011 a0001c0047t0011 a0001c0051t0012 a0002c0005t0003 a0002c0049t0003 a0003c0056t0001	a0001c0003t0016g0007 a0001c0003t0017g0050 a0001c0006t0002g0063 others(9): Show a0001c0003t0016g0007 a0001c0003t0017g0050 a0001c0006t0002g0063 a0001c0015t0017g0089 a0001c0026t0004g0067 a0001c0038t0011g0066 a0001c0047t0011g0012 a0001c0051t0012g0005 a0002c0005t0003g0104 a0002c0005t0003g0128 a0002c0049t0003g0127 a0003c0056t0001g0078	12	132	0.0909	-10	c.413 others(27): Show c.413+3942_413+3951delATATATATAT	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	4/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	169203351	GCACACAC others(3): Show GCACACACACA	G G	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0017 a0001c0017	a0001c0017t0001 a0001c0017t0001	a0001c0017t0001g0062 a0001c0017t0001g0062	1	132	0.0076	-10	c.342 others(27): Show c.342-9811_342-9802delTGTGTGTGTG	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	3/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	169229642	TTCTCTCT others(3): Show TTCTCTCTCTC	T T	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02896.hp2 HG02897.hp2 HG02145.hp1 HG02896.hp2 HG02897.hp2	a0001 a0002 a0001 a0002	a0001c0038 a0002c0011 a0001c0038 a0002c0011	a0001c0038t0011 a0002c0011t0005 a0001c0038t0011 a0002c0011t0005	a0001c0038t0011g0066 a0002c0011t0005g0065 a0002c0011t0005g0075 a0001c0038t0011g0066 a0002c0011t0005g0065 a0002c0011t0005g0075	3	132	0.0227	-10	c.341 others(29): Show c.341+15053_341+15062delGAGAGAGAGA	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	3/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	169257533	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00735.hp1 HG01167.hp2 others(10): Show HG00408.hp2 HG00735.hp1 HG01167.hp2 HG01433.hp2 HG02015.hp2 HG02027.hp1 HG02027.hp2 HG02109.hp2 HG02129.hp1 HG03017.hp1 HG03927.hp2 NA19060.hp2 NA19066.hp2	a0001 a0002 a0008 a0001 a0002 a0008	a0001c0001 a0001c0006 a0001c0007 others(5): Show a0001c0001 a0001c0006 a0001c0007 a0001c0037 a0002c0002 a0002c0008 a0002c0012 a0008c0035	a0001c0001t0001 a0001c0006t0002 a0001c0007t0001 others(6): Show a0001c0001t0001 a0001c0006t0002 a0001c0007t0001 a0001c0037t0013 a0002c0002t0008 a0002c0002t0022 a0002c0008t0002 a0002c0012t0004 a0008c0035t0004	a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0041 others(10): Show a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0041 a0001c0006t0002g0039 a0001c0007t0001g0040 a0001c0037t0013g0021 a0002c0002t0008g0022 a0002c0002t0022g0038 a0002c0008t0002g0017 a0002c0008t0002g0020 a0002c0008t0002g0042 a0002c0012t0004g0037 a0008c0035t0004g0049	13	132	0.0985	-10	c.198 others(27): Show c.198-6084_198-6075delAAAAAAAAAA	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding	1/35			chr5	TogoVar
SLIT3_chr5_168656740_169306139	169305987	AGCTCCCG others(3): Show AGCTCCCGGCC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0002 a0001c0006t0002	a0001c0006t0002g0063 a0001c0006t0002g0063	1	132	0.0076	-10	c.-52 others(21): Show c.-5288_-5279delGGCCGGGAGC	SLIT3	ENSG00000184347.16	transcript	ENST00000519560.6	protein_coding		4849		chr5	TogoVar
SLITRK3_chr3_165181720_165201384	165183637	TACACACA others(3): Show TACACACACAC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00423.hp2 HG00438.hp2 HG00639.hp2 others(21): Show HG00423.hp2 HG00438.hp2 HG00639.hp2 HG00642.hp2 HG01106.hp2 HG01515.hp1 HG01517.hp2 HG01978.hp2 HG02027.hp2 HG02083.hp1 HG02896.hp1 HG02897.hp1 HG04199.hp2 HG04228.hp1 NA18951.hp1 NA18957.hp2 NA18965.hp1 NA18969.hp2 NA18978.hp2 NA18991.hp1 NA18995.hp1 NA19055.hp2 NA20805.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0010 others(1): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0010 a0001c0001t0020	a0001c0001t0002g0052 a0001c0001t0002g0075 a0001c0001t0004g0005 others(7): Show a0001c0001t0002g0052 a0001c0001t0002g0075 a0001c0001t0004g0005 a0001c0001t0004g0063 a0001c0001t0004g0098 a0001c0001t0004g0099 a0001c0001t0004g0125 a0001c0001t0010g0027 a0001c0001t0010g0048 a0001c0001t0020g0034	24	414	0.0580	-10	c.42 others(21): Show c.4250_*4259delGTGTGTGTGT	SLITRK3	ENSG00000121871.4	transcript	ENST00000475390.2	protein_coding		3082		chr3	TogoVar
SLITRK3_chr3_165181720_165201384	165187211	AGTGTGTG others(3): Show AGTGTGTGTGT	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0031 a0001c0001t0031	a0001c0001t0031g0069 a0001c0001t0031g0069	1	414	0.0024	-10	c.67 others(19): Show c.676_*685delACACACACAC	SLITRK3	ENSG00000121871.4	transcript	ENST00000475390.2	protein_coding	2/2	676		chr3	TogoVar
SLITRK4_chrX_143617790_143641101	143628091	CTTTTTTT others(3): Show CTTTTTTTTTT	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG03942.hp1 HG03942.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0085 a0001c0001t0085	a0001c0001t0085g0126 a0001c0001t0085g0126	1	335	0.0030	-10	c.49 others(19): Show c.494_*503delAAAAAAAAAA	SLITRK4	ENSG00000179542.16	transcript	ENST00000356928.2	protein_coding	2/2	494		chrX	TogoVar
SLITRK4_chrX_143617790_143641101	143635481	AACACACA others(3): Show AACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0166 a0001c0001t0002g0166	1	335	0.0030	-10	c.-51 others(25): Show c.-51+244_-51+253delGTGTGTGTGT	SLITRK4	ENSG00000179542.16	transcript	ENST00000356928.2	protein_coding	1/1			chrX	TogoVar
SLITRK4_chrX_143617790_143641101	143637229	TTCATTTT others(3): Show TTCATTTTTTG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02109.hp2 HG03041.hp1 HG02109.hp2 HG03041.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0007 a0001c0002t0004 a0001c0002t0007	a0001c0002t0004g0054 a0001c0002t0007g0057 a0001c0002t0004g0054 a0001c0002t0007g0057	2	335	0.0060	-10	c.-15 others(21): Show c.-1555_-1546delCAAAAAATGA	SLITRK4	ENSG00000179542.16	transcript	ENST00000356928.2	protein_coding		1129		chrX	TogoVar
SLITRK4_chrX_143617790_143641101	143639947	CAAAATAA others(3): Show CAAAATAAAAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00099.hp2 HG00323.hp1 HG00408.hp1 others(68): Show HG00099.hp2 HG00323.hp1 HG00408.hp1 HG00438.hp2 HG00544.hp1 HG00544.hp2 HG00597.hp2 HG00733.hp2 HG01109.hp1 HG01168.hp1 HG01169.hp2 HG01175.hp1 HG01255.hp1 HG01891.hp2 HG01928.hp1 HG01975.hp2 HG02015.hp1 HG02027.hp1 HG02040.hp1 HG02074.hp1 HG02083.hp1 HG02165.hp2 HG02572.hp1 HG02683.hp2 HG02717.hp1 HG02723.hp2 HG02809.hp2 HG02896.hp1 HG02897.hp2 HG02922.hp2 HG02965.hp1 HG03139.hp1 HG03195.hp1 HG03209.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03490.hp1 HG03516.hp2 HG03540.hp2 HG03654.hp1 HG03710.hp1 HG04184.hp1 HG04199.hp1 NA18906.hp2 NA18943.hp1 NA18944.hp1 NA18948.hp1 NA18954.hp1 NA18959.hp1 NA18961.hp1 NA18963.hp1 NA18965.hp1 NA18970.hp1 NA18972.hp1 NA18986.hp1 NA18987.hp1 NA18987.hp2 NA18990.hp1 NA19011.hp2 NA19056.hp1 NA19068.hp1 NA19070.hp1 NA19075.hp1 NA19076.hp1 NA19077.hp1 NA19085.hp1 NA20129.hp1 NA20129.hp2 NA20752.hp1 homoSapiens_chm13v2.hp1	a0001 a0003 a0004 others(1): Show a0001 a0003 a0004 a0005	a0001c0001 a0001c0002 a0003c0009 others(2): Show a0001c0001 a0001c0002 a0003c0009 a0004c0006 a0005c0005	a0001c0001t0005 a0001c0001t0008 a0001c0001t0017 others(35): Show a0001c0001t0005 a0001c0001t0008 a0001c0001t0017 a0001c0001t0019 a0001c0001t0020 a0001c0001t0024 a0001c0001t0025 a0001c0001t0038 a0001c0001t0043 a0001c0001t0044 a0001c0001t0045 a0001c0001t0046 a0001c0001t0068 a0001c0001t0080 a0001c0001t0090 a0001c0001t0095 a0001c0001t0096 a0001c0001t0097 a0001c0001t0098 a0001c0001t0099 a0001c0001t0100 a0001c0001t0101 a0001c0001t0102 a0001c0001t0103 a0001c0001t0104 a0001c0001t0107 a0001c0001t0108 a0001c0001t0109 a0001c0001t0110 a0001c0001t0111 a0001c0001t0114 a0001c0002t0011 a0001c0002t0012 a0001c0002t0022 a0001c0002t0031 a0003c0009t0038 a0004c0006t0012 a0005c0005t0002	a0001c0001t0005g0009 a0001c0001t0005g0036 a0001c0001t0005g0235 others(58): Show a0001c0001t0005g0009 a0001c0001t0005g0036 a0001c0001t0005g0235 a0001c0001t0005g0238 a0001c0001t0005g0243 a0001c0001t0005g0253 a0001c0001t0008g0018 a0001c0001t0008g0221 a0001c0001t0008g0224 a0001c0001t0008g0228 a0001c0001t0008g0237 a0001c0001t0008g0241 a0001c0001t0008g0249 a0001c0001t0017g0019 a0001c0001t0017g0212 a0001c0001t0019g0214 a0001c0001t0019g0223 a0001c0001t0019g0227 a0001c0001t0020g0017 a0001c0001t0020g0219 a0001c0001t0024g0209 a0001c0001t0024g0220 a0001c0001t0024g0231 a0001c0001t0025g0038 a0001c0001t0025g0245 a0001c0001t0038g0178 a0001c0001t0043g0207 a0001c0001t0043g0236 a0001c0001t0044g0246 a0001c0001t0044g0250 a0001c0001t0045g0216 a0001c0001t0045g0239 a0001c0001t0046g0037 a0001c0001t0068g0063 a0001c0001t0080g0107 a0001c0001t0090g0182 a0001c0001t0095g0206 a0001c0001t0096g0244 a0001c0001t0097g0213 a0001c0001t0098g0226 a0001c0001t0099g0215 a0001c0001t0100g0247 a0001c0001t0101g0225 a0001c0001t0102g0251 a0001c0001t0103g0248 a0001c0001t0104g0233 a0001c0001t0107g0252 a0001c0001t0108g0218 a0001c0001t0109g0242 a0001c0001t0110g0211 a0001c0001t0111g0222 a0001c0001t0114g0254 a0001c0002t0011g0008 a0001c0002t0011g0157 a0001c0002t0012g0014 a0001c0002t0012g0158 a0001c0002t0022g0155 a0001c0002t0031g0156 a0003c0009t0038g0183 a0004c0006t0012g0145 a0005c0005t0002g0147	71	335	0.2119	-10	c.-42 others(21): Show c.-4273_-4264delATTTTATTTT	SLITRK4	ENSG00000179542.16	transcript	ENST00000356928.2	protein_coding		3847		chrX	TogoVar
SLITRK4_chrX_143617790_143641101	143640765	TACACACA others(3): Show TACACACACAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03139.hp1 NA20129.hp2 HG03139.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0046 a0001c0001t0046	a0001c0001t0046g0037 a0001c0001t0046g0037	2	335	0.0060	-10	c.-50 others(21): Show c.-5091_-5082delGTGTGTGTGT	SLITRK4	ENSG00000179542.16	transcript	ENST00000356928.2	protein_coding		4665		chrX	TogoVar
SLITRK5_chr13_87666371_87684616	87672854	GGTGTGTG others(3): Show GGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG01891.hp2 HG02615.hp2 others(11): Show HG00099.hp2 HG01891.hp2 HG02615.hp2 HG02717.hp1 HG03139.hp2 HG03540.hp2 HG03688.hp2 HG04115.hp2 HG06807.hp2 NA18984.hp1 NA19054.hp2 NA20300.hp2 NA20905.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 others(1): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0006 a0001c0001t0016	a0001c0001t0002g0017 a0001c0001t0002g0037 a0001c0001t0002g0061 others(6): Show a0001c0001t0002g0017 a0001c0001t0002g0037 a0001c0001t0002g0061 a0001c0001t0002g0122 a0001c0001t0003g0021 a0001c0001t0003g0097 a0001c0001t0003g0098 a0001c0001t0006g0126 a0001c0001t0016g0017	14	404	0.0347	-10	c.-9+ others(23): Show c.-9+690_-9+699delGTGTGTGTGT	SLITRK5	ENSG00000165300.8	transcript	ENST00000683689.1	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr13	TogoVar
SLITRK5_chr13_87666371_87684616	87674007	AACACACA others(3): Show AACACACACAC	A A	intron_variant intron_variant	MODIFIER	NA19063.hp1 NA19063.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0100 a0001c0001t0004g0100	1	404	0.0025	-10	c.-8- others(25): Show c.-8-1349_-8-1340delACACACACAC	SLITRK5	ENSG00000165300.8	transcript	ENST00000683689.1	protein_coding	1/1		INFO_REALIGN_3_PRIME	chr13	TogoVar
SLITRK6_chr13_85787790_85804419	85790746	CAGGCAGC others(3): Show CAGGCAGCTTA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02486.hp2 HG02572.hp1 HG03540.hp1 HG02486.hp2 HG02572.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0021 a0001c0001t0011g0034 a0001c0001t0011g0021 a0001c0001t0011g0034	3	432	0.0069	-10	c.32 others(21): Show c.3227_*3236delTAAGCTGCCT	SLITRK6	ENSG00000184564.11	transcript	ENST00000647374.2	protein_coding		2043		chr13	TogoVar
SLMAP_chr3_57751309_57935003	57771143	TCTCCCCT others(3): Show TCTCCCCTCCC	T T	intron_variant intron_variant	MODIFIER	HG01934.hp1 HG02615.hp1 HG02647.hp1 others(4): Show HG01934.hp1 HG02615.hp1 HG02647.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02922.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0016 a0001c0001t0010 a0001c0001t0016	a0001c0001t0010g0300 a0001c0001t0010g0301 a0001c0001t0010g0302 others(4): Show a0001c0001t0010g0300 a0001c0001t0010g0301 a0001c0001t0010g0302 a0001c0001t0010g0303 a0001c0001t0016g0005 a0001c0001t0016g0006 a0001c0001t0016g0007	7	310	0.0226	-10	c.198 others(29): Show c.198+13323_198+13332delCCCTCCCCTC	SLMAP	ENSG00000163681.17	transcript	ENST00000671191.1	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
SLMAP_chr3_57751309_57935003	57771220	TGAGAGAG others(3): Show TGAGAGAGAGA	T T	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0033 a0001c0001t0033	a0001c0001t0033g0305 a0001c0001t0033g0305	1	310	0.0032	-10	c.198 others(29): Show c.198+13385_198+13394delAGAGAGAGAG	SLMAP	ENSG00000163681.17	transcript	ENST00000671191.1	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
SLMAP_chr3_57751309_57935003	57805900	GACTCACT others(3): Show GACTCACTCTT	G G	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02965.hp2 HG01891.hp2 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0136 a0001c0001t0003g0182 a0001c0001t0001g0136 a0001c0001t0003g0182	2	310	0.0065	-10	c.199 others(29): Show c.199-25477_199-25468delCTCTTACTCA	SLMAP	ENSG00000163681.17	transcript	ENST00000671191.1	protein_coding	2/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
SLMAP_chr3_57751309_57935003	57853955	TTATATAT others(3): Show TTATATATATA	T T	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG03017.hp1 HG03704.hp2 others(2): Show HG01243.hp1 HG03017.hp1 HG03704.hp2 NA18939.hp1 NA18993.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0001 a0001c0001t0002 a0001c0001t0003	a0001c0001t0001g0119 a0001c0001t0002g0030 a0001c0001t0002g0053 others(2): Show a0001c0001t0001g0119 a0001c0001t0002g0030 a0001c0001t0002g0053 a0001c0001t0002g0068 a0001c0001t0003g0124	5	310	0.0161	-10	c.520 others(27): Show c.520-3742_520-3733delATATATATAT	SLMAP	ENSG00000163681.17	transcript	ENST00000671191.1	protein_coding	6/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
SLMAP_chr3_57751309_57935003	57866273	AAAAAGAA others(3): Show AAAAAGAAAAG	A A	intron_variant intron_variant	MODIFIER	HG00544.hp2 NA19007.hp1 HG00544.hp2 NA19007.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0006 a0001c0001t0002 a0001c0001t0006	a0001c0001t0002g0052 a0001c0001t0006g0113 a0001c0001t0002g0052 a0001c0001t0006g0113	2	310	0.0065	-10	c.123 others(28): Show c.1237+998_1237+1007delAAAGAAAAGA	SLMAP	ENSG00000163681.17	transcript	ENST00000671191.1	protein_coding	13/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
SLMAP_chr3_57751309_57935003	57869630	TTATATAT others(3): Show TTATATATATA	T T	intron_variant intron_variant	MODIFIER	NA18944.hp2 NA18944.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0019 a0001c0001t0002g0019	1	310	0.0032	-10	c.123 others(29): Show c.1238-1985_1238-1976delTATATATATA	SLMAP	ENSG00000163681.17	transcript	ENST00000671191.1	protein_coding	13/24		INFO_REALIGN_3_PRIME	chr3	TogoVar
SLMAP_chr3_57751309_57935003	57880169	TTTTTGTT others(3): Show TTTTTGTTTTG	T T	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp1 HG00408.hp1 others(110): Show HG00099.hp2 HG00280.hp1 HG00408.hp1 HG00438.hp2 HG00609.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp2 HG00673.hp2 HG00733.hp1 HG00735.hp2 HG00741.hp2 HG01069.hp1 HG01071.hp1 HG01109.hp2 HG01168.hp1 HG01169.hp1 HG01243.hp1 HG01256.hp1 HG01346.hp1 HG01496.hp2 HG01928.hp1 HG01934.hp1 HG01934.hp2 HG01943.hp2 HG01978.hp2 HG02027.hp2 HG02040.hp1 HG02080.hp2 HG02083.hp1 HG02132.hp2 HG02258.hp2 HG02293.hp2 HG02300.hp1 HG02486.hp2 HG02523.hp1 HG02559.hp2 HG02615.hp1 HG02622.hp1 HG02630.hp1 HG02647.hp1 HG02647.hp2 HG02717.hp1 HG02735.hp1 HG02809.hp2 HG02886.hp1 HG02886.hp2 HG02896.hp1 HG02897.hp1 HG02922.hp1 HG02922.hp2 HG02965.hp2 HG02976.hp2 HG03130.hp1 HG03209.hp1 HG03209.hp2 HG03453.hp2 HG03491.hp2 HG03540.hp1 HG03669.hp2 HG03688.hp1 HG03834.hp2 HG03927.hp1 HG04115.hp2 HG04204.hp2 HG06807.hp1 HG06807.hp2 NA18906.hp2 NA18939.hp2 NA18940.hp2 NA18941.hp2 NA18943.hp1 NA18944.hp1 NA18949.hp1 NA18950.hp2 NA18951.hp1 NA18961.hp2 NA18962.hp1 NA18966.hp1 NA18968.hp2 NA18970.hp2 NA18974.hp1 NA18977.hp2 NA18979.hp1 NA18984.hp1 NA18989.hp2 NA18990.hp2 NA18991.hp1 NA18993.hp2 NA18994.hp2 NA18999.hp2 NA19000.hp1 NA19002.hp2 NA19004.hp2 NA19005.hp1 NA19010.hp1 NA19012.hp1 NA19043.hp1 NA19058.hp2 NA19064.hp2 NA19065.hp1 NA19068.hp2 NA19070.hp1 NA19077.hp1 NA19078.hp2 NA19079.hp1 NA19080.hp2 NA19082.hp1 NA19089.hp2 NA19240.hp2 NA20752.hp2 NA20805.hp1 NA21309.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0002 a0002c0005 others(2): Show a0001c0001 a0001c0002 a0002c0005 a0003c0010 a0004c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 others(14): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 a0001c0001t0010 a0001c0001t0016 a0001c0001t0033 a0001c0002t0001 a0001c0002t0008 a0001c0002t0017 a0001c0002t0019 a0001c0002t0021 a0001c0002t0024 a0001c0002t0029 a0001c0002t0030 a0002c0005t0001 a0003c0010t0001 a0004c0007t0001	a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0122 others(110): Show a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0122 a0001c0001t0001g0136 a0001c0001t0001g0287 a0001c0001t0001g0288 a0001c0001t0001g0289 a0001c0001t0001g0290 a0001c0001t0001g0291 a0001c0001t0001g0292 a0001c0001t0001g0294 a0001c0001t0001g0295 a0001c0001t0002g0023 a0001c0001t0009g0116 a0001c0001t0009g0117 a0001c0001t0009g0118 a0001c0001t0009g0121 a0001c0001t0010g0300 a0001c0001t0010g0301 a0001c0001t0010g0302 a0001c0001t0010g0303 a0001c0001t0016g0005 a0001c0001t0016g0006 a0001c0001t0016g0007 a0001c0001t0033g0305 a0001c0002t0001g0196 a0001c0002t0001g0197 a0001c0002t0001g0198 a0001c0002t0001g0199 a0001c0002t0001g0201 a0001c0002t0001g0202 a0001c0002t0001g0203 a0001c0002t0001g0204 a0001c0002t0001g0205 a0001c0002t0001g0206 a0001c0002t0001g0207 a0001c0002t0001g0208 a0001c0002t0001g0209 a0001c0002t0001g0210 a0001c0002t0001g0211 a0001c0002t0001g0212 a0001c0002t0001g0214 a0001c0002t0001g0215 a0001c0002t0001g0217 a0001c0002t0001g0218 a0001c0002t0001g0219 a0001c0002t0001g0221 a0001c0002t0001g0222 a0001c0002t0001g0225 a0001c0002t0001g0226 a0001c0002t0001g0227 a0001c0002t0001g0228 a0001c0002t0001g0229 a0001c0002t0001g0230 a0001c0002t0001g0231 a0001c0002t0001g0232 a0001c0002t0001g0233 a0001c0002t0001g0234 a0001c0002t0001g0235 a0001c0002t0001g0236 a0001c0002t0001g0237 a0001c0002t0001g0238 a0001c0002t0001g0241 a0001c0002t0001g0242 a0001c0002t0001g0244 a0001c0002t0001g0245 a0001c0002t0001g0247 a0001c0002t0001g0248 a0001c0002t0001g0249 a0001c0002t0001g0250 a0001c0002t0001g0251 a0001c0002t0001g0252 a0001c0002t0001g0253 a0001c0002t0001g0254 a0001c0002t0001g0255 a0001c0002t0001g0256 a0001c0002t0001g0257 a0001c0002t0001g0258 a0001c0002t0001g0259 a0001c0002t0001g0260 a0001c0002t0001g0261 a0001c0002t0001g0262 a0001c0002t0001g0263 a0001c0002t0001g0266 a0001c0002t0001g0268 a0001c0002t0001g0270 a0001c0002t0001g0271 a0001c0002t0001g0272 a0001c0002t0001g0273 a0001c0002t0001g0274 a0001c0002t0001g0275 a0001c0002t0001g0276 a0001c0002t0001g0278 a0001c0002t0001g0281 a0001c0002t0001g0283 a0001c0002t0001g0296 a0001c0002t0001g0298 a0001c0002t0008g0223 a0001c0002t0008g0240 a0001c0002t0008g0243 a0001c0002t0008g0267 a0001c0002t0008g0277 a0001c0002t0017g0101 a0001c0002t0017g0299 a0001c0002t0019g0220 a0001c0002t0021g0239 a0001c0002t0024g0216 a0001c0002t0029g0280 a0001c0002t0030g0279 a0002c0005t0001g0213 a0002c0005t0001g0265 a0003c0010t0001g0285 a0004c0007t0001g0282	113	310	0.3645	-10	c.130 others(29): Show c.1300+8509_1300+8518delTTGTTTTGTT	SLMAP	ENSG00000163681.17	transcript	ENST00000671191.1	protein_coding	14/24		INFO_REALIGN_3_PRIME	chr3	TogoVar

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