view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PFKFB3_chr10_6197932_6240532 | 6210810 | ATGTTAGC others(93): Show |
A | intron_variant | MODIFIER | HG02056.hp1 NA18957.hp1 NA18965.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0005a0001c0001t0006others(1): Show | a0001c0001t0001g0097 a0001c0001t0001g0225 a0001c0001t0001g0236 others(4): Show |
7 | 428 | 0.0164 | -100 | c.77- others(115): Show |
PFKFB3 | ENSG00000170525.21 | transcript | ENST00000379775.9 | protein_coding | 1/14 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
PHACTR3_chr20_59599540_59852711 | 59674477 | CCCCTTGT others(93): Show |
C | intron_variant | MODIFIER | HG00408.hp2 HG00597.hp2 HG00741.hp1 others(27): Show |
a0001a0003 | a0001c0001a0003c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(4): Show | a0001c0001t0001g0008 a0001c0001t0001g0026 a0001c0001t0001g0050 others(27): Show |
30 | 246 | 0.1220 | -100 | c.119 others(119): Show |
PHACTR3 | ENSG00000087495.17 | transcript | ENST00000371015.6 | protein_coding | 1/12 | chr20 | TogoVar | |||||||
PHACTR3_chr20_59599540_59852711 | 59819701 | AGTGCTGT others(93): Show |
A | intron_variant | MODIFIER | HG02015.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0142 | 1 | 248 | 0.0040 | -100 | c.132 others(121): Show |
PHACTR3 | ENSG00000087495.17 | transcript | ENST00000371015.6 | protein_coding | 8/12 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
PID1_chr2_229018973_229276287 | 229184688 | GTATATAT others(93): Show |
G | intron_variant | MODIFIER | HG01952.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0166 | 1 | 186 | 0.0054 | -100 | c.31- others(117): Show |
PID1 | ENSG00000153823.19 | transcript | ENST00000392055.8 | protein_coding | 1/2 | chr2 | TogoVar | |||||||
PIK3C2B_chr1_204417633_204499805 | 204471058 | CATGGCTT others(93): Show |
C | intron_variant | MODIFIER | HG00140.hp1 HG00438.hp1 HG00597.hp1 others(33): Show |
a0001a0006a0010others(1): Show | a0001c0001a0001c0002a0001c0007others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(13): Show | a0001c0001t0001g0073 a0001c0001t0001g0081 a0001c0001t0001g0106 others(33): Show |
36 | 107 | 0.3364 | -100 | c.-84 others(117): Show |
PIK3C2B | ENSG00000133056.14 | transcript | ENST00000684373.1 | protein_coding | 1/32 | chr1 | TogoVar | |||||||
PIP5K1C_chr19_3625183_3705468 | 3649048 | TTGTCACC others(93): Show |
T | intron_variant | MODIFIER | NA18966.hp1 | a0012 | a0012c0019 | a0012c0019t0044 | a0012c0019t0044g0037 | 1 | 167 | 0.0060 | -100 | c.112 others(117): Show |
PIP5K1C | ENSG00000186111.11 | transcript | ENST00000335312.8 | protein_coding | 8/17 | chr19 | TogoVar | |||||||
PLAUR_chr19_43643579_43675169 | 43643681 | TGAATAGT others(93): Show |
T | downstream_gene_variant | MODIFIER | HG02886.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0238 | 1 | 423 | 0.0024 | -100 | c.*51 others(111): Show |
PLAUR | ENSG00000011422.12 | transcript | ENST00000340093.8 | protein_coding | 4897 | chr19 | TogoVar | |||||||
PLCXD1_chrX_276381_308356 | 280777 | GGGGAGGC others(93): Show |
G | upstream_gene_variant | MODIFIER | NA18906.hp2 | a0001 | a0001c0010 | a0001c0010t0041 | a0001c0010t0041g0167 | 1 | 149 | 0.0067 | -100 | c.-92 others(109): Show |
PLCXD1 | ENSG00000182378.15 | transcript | ENST00000381657.8 | protein_coding | 603 | chrX | TogoVar | |||||||
PLXDC2_chr10_19811432_20294856 | 20126589 | CACACACG others(93): Show |
C | intron_variant | MODIFIER | HG00733.hp1 HG01168.hp1 HG01169.hp1 others(1): Show |
a0002a0003 | a0002c0002a0003c0003 | a0002c0002t0112a0003c0003t0008a0003c0003t0018others(1): Show | a0002c0002t0112g0035 a0003c0003t0008g0018 a0003c0003t0018g0091 others(1): Show |
4 | 178 | 0.0225 | -100 | c.542 others(119): Show |
PLXDC2 | ENSG00000120594.17 | transcript | ENST00000377252.5 | protein_coding | 4/13 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
PLXNA4_chr7_132118340_132581470 | 132132437 | GTTCTGTT others(93): Show |
G | intron_variant | MODIFIER | HG01496.hp1 HG02647.hp1 HG03139.hp2 |
a0001a0002a0004 | a0001c0019a0002c0016a0004c0036 | a0001c0019t0006a0002c0016t0006a0004c0036t0006 | a0001c0019t0006g0075 a0002c0016t0006g0074 a0004c0036t0006g0031 |
3 | 86 | 0.0349 | -100 | c.558 others(117): Show |
PLXNA4 | ENSG00000221866.10 | transcript | ENST00000321063.9 | protein_coding | 31/31 | chr7 | TogoVar | |||||||
PPP2R2D_chr10_131896008_131964834 | 131917763 | GCGGGTGG others(93): Show |
G | intron_variant | MODIFIER | HG03486.hp1 | a0001 | a0001c0001 | a0001c0001t0063 | a0001c0001t0063g0177 | 1 | 392 | 0.0026 | -100 | c.100 others(119): Show |
PPP2R2D | ENSG00000175470.20 | transcript | ENST00000455566.6 | protein_coding | 2/8 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
PPP2R5C_chr14_101756709_101932977 | 101782482 | CTCTCCCC others(93): Show |
C | intron_variant | MODIFIER | HG01070.hp1 | a0002 | a0002c0002 | a0002c0002t0003 | a0002c0002t0003g0129 | 1 | 135 | 0.0074 | -100 | c.94- others(115): Show |
PPP2R5C | ENSG00000078304.20 | transcript | ENST00000694906.1 | protein_coding | 2/15 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
PPP2R5C_chr14_101756709_101932977 | 101782490 | CTTCCCCT others(93): Show |
C | intron_variant | MODIFIER | HG02895.hp1 HG04115.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0014 | a0001c0001t0001g0113 a0001c0001t0014g0110 |
2 | 136 | 0.0147 | -100 | c.94- others(115): Show |
PPP2R5C | ENSG00000078304.20 | transcript | ENST00000694906.1 | protein_coding | 2/15 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
PRKD1_chr14_29571479_29932847 | 29826361 | TATATATA others(93): Show |
T | intron_variant | MODIFIER | HG02717.hp1 HG02818.hp1 HG02976.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0081 a0001c0001t0001g0088 a0001c0001t0002g0082 others(1): Show |
4 | 156 | 0.0256 | -100 | c.265 others(121): Show |
PRKD1 | ENSG00000184304.17 | transcript | ENST00000331968.11 | protein_coding | 1/17 | chr14 | TogoVar | |||||||
PRKN_chr6_161342417_162732766 | 161645945 | CGGAGGAG others(93): Show |
C | intron_variant | MODIFIER | HG01361.hp1 HG02602.hp2 HG03209.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0005 | a0001c0001t0001g0024 a0001c0001t0001g0028 a0001c0001t0001g0030 others(1): Show |
4 | 32 | 0.1250 | -100 | c.872 others(119): Show |
PRKN | ENSG00000185345.25 | transcript | ENST00000366898.6 | protein_coding | 7/11 | chr6 | TogoVar | |||||||
PSMA7_chr20_62131733_62148394 | 62145968 | AGTCTACA others(93): Show |
A | upstream_gene_variant | MODIFIER | HG01167.hp1 HG02257.hp2 HG02280.hp1 others(1): Show |
a0001 | a0001c0002 | a0001c0002t0004 | a0001c0002t0004g0013 | 4 | 360 | 0.0111 | -100 | c.-27 others(111): Show |
PSMA7 | ENSG00000101182.15 | transcript | ENST00000370873.9 | protein_coding | 2575 | chr20 | TogoVar | |||||||
PTDSS2_chr11_445279_496399 | 485784 | CCGTGCGC others(93): Show |
C | intron_variant | MODIFIER | HG02572.hp2 HG03471.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0010a0001c0002t0010 | a0001c0001t0010g0053 a0001c0002t0010g0204 |
2 | 344 | 0.0058 | -100 | c.436 others(117): Show |
PTDSS2 | ENSG00000174915.12 | transcript | ENST00000308020.6 | protein_coding | 4/11 | INFO_REALIGN_3_PRIME | chr11 | TogoVar | ||||||
PTGER4_chr5_40674915_40698735 | 40697051 | GGAAAGAA others(93): Show |
G | downstream_gene_variant | MODIFIER | HG00423.hp1 HG00673.hp2 HG01081.hp1 others(53): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0013 | a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0014 others(3): Show |
56 | 404 | 0.1386 | -100 | c.*46 others(111): Show |
PTGER4 | ENSG00000171522.6 | transcript | ENST00000302472.4 | protein_coding | 3317 | chr5 | TogoVar | |||||||
PTGES3L_chr17_42963103_42985080 | 42967407 | ATAAATAT others(93): Show |
A | downstream_gene_variant | MODIFIER | HG01099.hp1 HG01192.hp2 HG01256.hp2 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0003 a0001c0001t0001g0009 a0001c0001t0001g0023 others(4): Show |
12 | 324 | 0.0370 | -100 | c.*16 others(111): Show |
PTGES3L | ENSG00000267060.7 | transcript | ENST00000591916.7 | protein_coding | 695 | chr17 | TogoVar | |||||||
PTGFR_chr1_78485974_78545701 | 78532382 | ATATATAT others(93): Show |
A | intron_variant | MODIFIER | HG02280.hp1 HG02809.hp2 HG03453.hp2 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0011a0001c0001t0023others(2): Show | a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0011g0239 others(3): Show |
6 | 384 | 0.0156 | -100 | c.799 others(117): Show |
PTGFR | ENSG00000122420.10 | transcript | ENST00000370757.8 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
PUM1_chr1_30926506_31070717 | 30972367 | GGGAGGGG others(93): Show |
G | intron_variant | MODIFIER | HG00639.hp2 HG01070.hp1 HG02155.hp2 others(7): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004 | a0001c0001t0001g0044 a0001c0001t0001g0078 a0001c0001t0001g0081 others(7): Show |
10 | 312 | 0.0321 | -100 | c.150 others(119): Show |
PUM1 | ENSG00000134644.16 | transcript | ENST00000426105.7 | protein_coding | 10/21 | chr1 | TogoVar | |||||||
PZP_chr12_9143840_9213395 | 9197418 | TAAAATAA others(93): Show |
T | intron_variant | MODIFIER | HG02280.hp1 NA18522.hp1 NA19240.hp1 |
a0001a0038 | a0001c0026a0038c0042 | a0001c0026t0001a0038c0042t0001 | a0001c0026t0001g0035 a0001c0026t0001g0126 a0038c0042t0001g0162 |
3 | 332 | 0.0090 | -100 | c.756 others(115): Show |
PZP | ENSG00000126838.10 | transcript | ENST00000261336.7 | protein_coding | 7/35 | chr12 | TogoVar | |||||||
RAB11FIP2_chr10_117999916_118051941 | 118032338 | AATAGACT others(93): Show |
A | intron_variant | MODIFIER | HG02523.hp2 | a0001 | a0001c0001 | a0001c0001t0039 | a0001c0001t0039g0084 | 1 | 398 | 0.0025 | -100 | c.126 others(119): Show |
RAB11FIP2 | ENSG00000107560.12 | transcript | ENST00000355624.8 | protein_coding | 3/4 | chr10 | TogoVar | |||||||
RAB5A_chr3_19942097_19990175 | 19969952 | TGCCACCA others(93): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(173): Show |
a0001 | a0001c0001a0001c0002a0001c0004others(1): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(17): Show | a0001c0001t0002g0002 a0001c0001t0002g0003 a0001c0001t0002g0013 others(140): Show |
176 | 344 | 0.5116 | -100 | c.164 others(117): Show |
RAB5A | ENSG00000144566.11 | transcript | ENST00000273047.9 | protein_coding | 2/5 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
RADIL_chr7_4792055_4888716 | 4808721 | AACGCCAC others(93): Show |
A | intron_variant | MODIFIER | HG03139.hp1 | a0025 | a0025c0053 | a0025c0053t0061 | a0025c0053t0061g0189 | 1 | 288 | 0.0035 | -100 | c.214 others(119): Show |
RADIL | ENSG00000157927.17 | transcript | ENST00000399583.4 | protein_coding | 9/14 | chr7 | TogoVar | |||||||
RBFOX3_chr17_79084345_79616051 | 79512609 | GGGGACGC others(93): Show |
G | intron_variant | MODIFIER | HG02258.hp1 HG03453.hp1 |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0006 | a0001c0001t0005g0142 a0001c0001t0006g0125 |
2 | 152 | 0.0132 | -100 | c.-31 others(121): Show |
RBFOX3 | ENSG00000167281.20 | transcript | ENST00000693108.1 | protein_coding | 1/14 | chr17 | TogoVar | |||||||
RERE_chr1_8347404_8822640 | 8668894 | ATCTGTGA others(93): Show |
A | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(78): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0003others(13): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(25): Show | a0001c0001t0001g0002 a0001c0001t0001g0012 a0001c0001t0001g0014 others(78): Show |
81 | 202 | 0.4010 | -100 | c.-14 others(121): Show |
RERE | ENSG00000142599.20 | transcript | ENST00000400908.7 | protein_coding | 1/22 | chr1 | TogoVar | |||||||
REV3L_chr6_111294033_111488218 | 111422580 | ATATATAT others(93): Show |
A | intron_variant | MODIFIER | HG01884.hp1 HG02109.hp1 HG02723.hp1 |
a0006 | a0006c0007 | a0006c0007t0003 | a0006c0007t0003g0003 a0006c0007t0003g0004 a0006c0007t0003g0007 |
3 | 286 | 0.0105 | -100 | c.140 others(117): Show |
REV3L | ENSG00000009413.17 | transcript | ENST00000368802.8 | protein_coding | 1/31 | chr6 | TogoVar | |||||||
RGL1_chr1_183800120_183933532 | 183870361 | TTGTCTTC others(93): Show |
T | intron_variant | MODIFIER | HG00438.hp1 NA18949.hp2 NA18956.hp1 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0002t0003 | a0001c0001t0002g0203 a0001c0002t0003g0145 a0001c0002t0003g0146 others(1): Show |
4 | 289 | 0.0138 | -100 | c.425 others(117): Show |
RGL1 | ENSG00000143344.16 | transcript | ENST00000360851.4 | protein_coding | 4/17 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
RGS22_chr8_99955936_100111049 | 100051612 | TTTATACA others(93): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00597.hp2 HG00673.hp1 others(42): Show |
a0001a0002a0013others(1): Show | a0001c0001a0001c0003a0001c0004others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0003t0001others(4): Show | a0001c0001t0001g0008 a0001c0001t0001g0018 a0001c0001t0001g0019 others(42): Show |
45 | 308 | 0.1461 | -100 | c.168 others(119): Show |
RGS22 | ENSG00000132554.21 | transcript | ENST00000360863.11 | protein_coding | 10/27 | chr8 | TogoVar | |||||||
RHOT2_chr16_663132_679171 | 665214 | ACCTCAGT others(93): Show |
A | upstream_gene_variant | MODIFIER | HG00639.hp1 HG02055.hp2 HG02145.hp2 others(8): Show |
a0002a0004 | a0002c0004a0002c0006a0002c0022others(1): Show | a0002c0004t0001a0002c0006t0001a0002c0022t0001others(1): Show | a0002c0004t0001g0004 a0002c0006t0001g0004 a0002c0022t0001g0004 others(1): Show |
11 | 77 | 0.1429 | -100 | c.-29 others(111): Show |
RHOT2 | ENSG00000140983.15 | transcript | ENST00000315082.9 | protein_coding | 2917 | chr16 | TogoVar | |||||||
RNASET2_chr6_166917113_166961550 | 166955223 | GCACACAC others(93): Show |
G | intron_variant | MODIFIER | HG03098.hp2 | a0001 | a0001c0003 | a0001c0003t0028 | a0001c0003t0028g0030 | 1 | 341 | 0.0029 | -100 | c.86+ others(113): Show |
RNASET2 | ENSG00000026297.17 | transcript | ENST00000508775.6 | protein_coding | 1/8 | chr6 | TogoVar | |||||||
RNFT2_chr12_116733315_116858631 | 116841792 | TAAATATA others(93): Show |
T | intron_variant | MODIFIER | HG00544.hp1 HG01243.hp2 HG02074.hp1 others(19): Show |
a0001 | a0001c0001a0001c0002a0001c0004 | a0001c0001t0001a0001c0001t0004a0001c0001t0007others(7): Show | a0001c0001t0001g0171 a0001c0001t0004g0109 a0001c0001t0004g0143 others(19): Show |
22 | 260 | 0.0846 | -100 | c.120 others(119): Show |
RNFT2 | ENSG00000135119.15 | transcript | ENST00000257575.9 | protein_coding | 10/10 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
ROBO1_chr3_78592239_79772998 | 78842306 | ATTTATAT others(93): Show |
A | intron_variant | MODIFIER | HG01109.hp2 HG01978.hp1 HG03486.hp2 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0009others(3): Show | a0001c0001t0001g0013 a0001c0001t0002g0007 a0001c0001t0009g0006 others(3): Show |
6 | 26 | 0.2308 | -100 | c.500 others(119): Show |
ROBO1 | ENSG00000169855.21 | transcript | ENST00000464233.6 | protein_coding | 4/30 | chr3 | TogoVar | |||||||
RPH3AL_chr17_207389_357807 | 235349 | CCAGGGTT others(93): Show |
C | intron_variant | MODIFIER | HG02622.hp2 | a0001 | a0001c0001 | a0001c0001t0017 | a0001c0001t0017g0099 | 1 | 132 | 0.0076 | -100 | c.613 others(119): Show |
RPH3AL | ENSG00000181031.16 | transcript | ENST00000331302.12 | protein_coding | 7/9 | chr17 | TogoVar | |||||||
RPS6KA6_chrX_84053350_84193199 | 84191629 | CATATATA others(93): Show |
C | upstream_gene_variant | MODIFIER | HG03453.hp1 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0234 | 1 | 268 | 0.0037 | -100 | c.-38 others(111): Show |
RPS6KA6 | ENSG00000072133.12 | transcript | ENST00000262752.5 | protein_coding | 3431 | chrX | TogoVar | |||||||
SCAMP5_chr15_74990563_75026495 | 74990994 | CTCTTTCT others(93): Show |
C | upstream_gene_variant | MODIFIER | HG01123.hp2 HG02258.hp2 HG03017.hp1 others(5): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0011 | a0001c0001t0001g0001 a0001c0001t0001g0011 a0001c0001t0001g0038 others(5): Show |
8 | 201 | 0.0398 | -100 | c.-47 others(111): Show |
SCAMP5 | ENSG00000198794.12 | transcript | ENST00000425597.8 | protein_coding | 4568 | chr15 | TogoVar | |||||||
SCGB1C2_chr17_132569_144067 | 141211 | GCCTTGGT others(93): Show |
A | downstream_gene_variant | MODIFIER | HG02258.hp1 HG02559.hp2 HG03098.hp2 others(1): Show |
a0003 | a0003c0003 | a0003c0003t0001 | a0003c0003t0001g0009 | 4 | 397 | 0.0101 | -100 | c.*22 others(111): Show |
SCGB1C2 | ENSG00000268320.4 | transcript | ENST00000595228.4 | protein_coding | 2144 | chr17 | TogoVar | |||||||
SCTR_chr2_119434843_119529483 | 119444826 | TACACATA others(93): Show |
T | intron_variant | MODIFIER | HG00280.hp1 HG00323.hp1 HG00408.hp2 others(29): Show |
a0001a0005a0007 | a0001c0001a0001c0002a0005c0008others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0004 a0001c0001t0001g0156 a0001c0001t0001g0186 others(29): Show |
32 | 213 | 0.1502 | -100 | c.114 others(119): Show |
SCTR | ENSG00000080293.10 | transcript | ENST00000019103.8 | protein_coding | 11/12 | chr2 | TogoVar | |||||||
SGSM2_chr17_2332501_2386054 | 2355337 | TGGGGGAA others(93): Show |
T | intron_variant | MODIFIER | HG04228.hp2 NA18747.hp1 NA19070.hp2 |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0003t0002 | a0001c0001t0001g0207 a0001c0001t0001g0254 a0001c0003t0002g0215 |
3 | 241 | 0.0124 | -100 | c.134 others(117): Show |
SGSM2 | ENSG00000141258.13 | transcript | ENST00000268989.8 | protein_coding | 2/23 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SGSM2_chr17_2332501_2386054 | 2355486 | TGGGGAAG others(93): Show |
T | intron_variant | MODIFIER | NA19086.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0157 | 1 | 351 | 0.0028 | -100 | c.134 others(117): Show |
SGSM2 | ENSG00000141258.13 | transcript | ENST00000268989.8 | protein_coding | 2/23 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SGSM2_chr17_2332501_2386054 | 2355883 | TGGGGAAG others(93): Show |
T | intron_variant | MODIFIER | HG00642.hp2 HG00738.hp1 HG01071.hp2 others(8): Show |
a0001 | a0001c0001a0001c0025 | a0001c0001t0001a0001c0001t0021a0001c0025t0001 | a0001c0001t0001g0073 a0001c0001t0001g0228 a0001c0001t0001g0245 others(8): Show |
11 | 350 | 0.0314 | -100 | c.134 others(117): Show |
SGSM2 | ENSG00000141258.13 | transcript | ENST00000268989.8 | protein_coding | 2/23 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SGSM2_chr17_2332501_2386054 | 2356230 | TGGGGGAA others(93): Show |
T | intron_variant | MODIFIER | HG00280.hp1 HG01106.hp1 HG02071.hp1 others(3): Show |
a0001 | a0001c0001a0001c0003a0001c0020 | a0001c0001t0001a0001c0003t0002a0001c0020t0001 | a0001c0001t0001g0152 a0001c0001t0001g0168 a0001c0001t0001g0184 others(3): Show |
6 | 226 | 0.0265 | -100 | c.134 others(117): Show |
SGSM2 | ENSG00000141258.13 | transcript | ENST00000268989.8 | protein_coding | 2/23 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SGSM2_chr17_2332501_2386054 | 2356353 | GAATGGTG others(93): Show |
G | intron_variant | MODIFIER | HG00621.hp1 | a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0105 | 1 | 420 | 0.0024 | -100 | c.134 others(117): Show |
SGSM2 | ENSG00000141258.13 | transcript | ENST00000268989.8 | protein_coding | 2/23 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
SHC2_chr19_411589_466033 | 427580 | AGGGGGAA others(93): Show |
A | intron_variant | MODIFIER | NA18960.hp2 NA19004.hp2 |
a0001 | a0001c0002 | a0001c0002t0001a0001c0002t0003 | a0001c0002t0001g0146 a0001c0002t0003g0174 |
2 | 210 | 0.0095 | -100 | c.117 others(119): Show |
SHC2 | ENSG00000129946.11 | transcript | ENST00000264554.11 | protein_coding | 9/12 | chr19 | TogoVar | |||||||
SHTN1_chr10_116876477_117010187 | 116946540 | TATAAATA others(93): Show |
T | intron_variant | MODIFIER | HG01109.hp2 | a0001 | a0001c0001 | a0001c0001t0041 | a0001c0001t0041g0153 | 1 | 290 | 0.0034 | -100 | c.617 others(117): Show |
SHTN1 | ENSG00000187164.20 | transcript | ENST00000355371.9 | protein_coding | 7/16 | chr10 | TogoVar | |||||||
SLC13A3_chr20_46552828_46656459 | 46656289 | ATATAATA others(93): Show |
A | upstream_gene_variant | MODIFIER | HG00741.hp1 HG02055.hp1 HG02280.hp1 others(7): Show |
a0001a0002a0009 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0001a0001c0002t0002a0001c0003t0006others(4): Show | a0001c0001t0001g0363 a0001c0001t0001g0365 a0001c0002t0002g0371 others(7): Show |
10 | 385 | 0.0260 | -100 | c.-49 others(111): Show |
SLC13A3 | ENSG00000158296.14 | transcript | ENST00000279027.9 | protein_coding | 4831 | chr20 | TogoVar | |||||||
SLC20A2_chr8_42411475_42506231 | 42451796 | GGAGGAAG others(93): Show |
G | intron_variant | MODIFIER | HG02109.hp1 | a0001 | a0001c0001 | a0001c0001t0006 | a0001c0001t0006g0116 | 1 | 236 | 0.0042 | -100 | c.614 others(117): Show |
SLC20A2 | ENSG00000168575.10 | transcript | ENST00000520262.6 | protein_coding | 5/10 | chr8 | TogoVar | |||||||
SLC26A4_chr7_107655828_107722809 | 107680249 | CTTATTAT others(93): Show |
C | intron_variant | MODIFIER | HG01433.hp2 HG02615.hp1 |
a0001 | a0001c0001 | a0001c0001t0016 | a0001c0001t0016g0100 a0001c0001t0016g0340 |
2 | 283 | 0.0071 | -100 | c.766 others(117): Show |
SLC26A4 | ENSG00000091137.14 | transcript | ENST00000644269.2 | protein_coding | 6/20 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SLC39A14_chr8_22362278_22427736 | 22396439 | AGAGAGAG others(93): Show |
A | intron_variant | MODIFIER | HG00597.hp1 HG01099.hp1 HG02486.hp1 others(4): Show |
a0001a0002a0003 | a0001c0014a0002c0006a0003c0001others(1): Show | a0001c0014t0004a0002c0006t0007a0003c0001t0001others(1): Show | a0001c0014t0004g0251 a0002c0006t0007g0205 a0002c0006t0007g0320 others(4): Show |
7 | 320 | 0.0219 | -100 | c.-15 others(117): Show |
SLC39A14 | ENSG00000104635.15 | transcript | ENST00000359741.10 | protein_coding | 1/8 | INFO_REALIGN_3_PRIME | chr8 | TogoVar |