Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
NRXN3_chr14_78165373_79873291	79227824	TCCTCCCT others(5): Show TCCTCCCTTCCTC	T T	intron_variant intron_variant	MODIFIER	HG03486.hp1 HG03486.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0012 a0001c0003t0012	a0001c0003t0012g0019 a0001c0003t0012g0019	1	24	0.0417	-12	c.326 others(35): Show c.3263-239372_3263-239361delCCTCCCTTCCTC	NRXN3	ENSG00000021645.20	transcript	ENST00000335750.7	protein_coding	15/20		INFO_REALIGN_3_PRIME	chr14	TogoVar
NRXN3_chr14_78165373_79873291	79234293	AATATATA others(5): Show AATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG03453.hp1 NA19240.hp1 HG03453.hp1 NA19240.hp1	a0001 a0001	a0001c0002 a0001c0006 a0001c0002 a0001c0006	a0001c0002t0011 a0001c0006t0017 a0001c0002t0011 a0001c0006t0017	a0001c0002t0011g0016 a0001c0006t0017g0001 a0001c0002t0011g0016 a0001c0006t0017g0001	2	24	0.0833	-12	c.326 others(35): Show c.3263-232892_3263-232881delTATATATATATA	NRXN3	ENSG00000021645.20	transcript	ENST00000335750.7	protein_coding	15/20		INFO_REALIGN_3_PRIME	chr14	TogoVar
NRXN3_chr14_78165373_79873291	79259709	TACACACA others(5): Show TACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG03225.hp1 NA19043.hp1 HG03225.hp1 NA19043.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0007 a0001c0002t0015 a0001c0002t0007 a0001c0002t0015	a0001c0002t0007g0009 a0001c0002t0015g0011 a0001c0002t0007g0009 a0001c0002t0015g0011	2	24	0.0833	-12	c.326 others(35): Show c.3263-207488_3263-207477delCACACACACACA	NRXN3	ENSG00000021645.20	transcript	ENST00000335750.7	protein_coding	15/20		INFO_REALIGN_3_PRIME	chr14	TogoVar
NRXN3_chr14_78165373_79873291	79349545	TACACACA others(5): Show TACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01081.hp1 NA19043.hp2 HG01081.hp1 NA19043.hp2	a0001 a0002 a0001 a0002	a0001c0004 a0002c0005 a0001c0004 a0002c0005	a0001c0004t0005 a0002c0005t0005 a0001c0004t0005 a0002c0005t0005	a0001c0004t0005g0003 a0002c0005t0005g0002 a0001c0004t0005g0003 a0002c0005t0005g0002	2	24	0.0833	-12	c.326 others(35): Show c.3263-117644_3263-117633delCACACACACACA	NRXN3	ENSG00000021645.20	transcript	ENST00000335750.7	protein_coding	15/20		INFO_REALIGN_3_PRIME	chr14	TogoVar
NRXN3_chr14_78165373_79873291	79376206	GTGTGTAT others(5): Show GTGTGTATGTATA	G G	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0015 a0001c0002t0015	a0001c0002t0015g0011 a0001c0002t0015g0011	1	24	0.0417	-12	c.326 others(33): Show c.3263-91013_3263-91002delGTGTATGTATAT	NRXN3	ENSG00000021645.20	transcript	ENST00000335750.7	protein_coding	15/20		INFO_REALIGN_3_PRIME	chr14	TogoVar
NRXN3_chr14_78165373_79873291	79441366	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03486.hp1 NA19240.hp1 HG03486.hp1 NA19240.hp1	a0001 a0001	a0001c0003 a0001c0006 a0001c0003 a0001c0006	a0001c0003t0012 a0001c0006t0017 a0001c0003t0012 a0001c0006t0017	a0001c0003t0012g0019 a0001c0006t0017g0001 a0001c0003t0012g0019 a0001c0006t0017g0001	2	24	0.0833	-12	c.326 others(33): Show c.3263-25835_3263-25824delTTTTTTTTTTTT	NRXN3	ENSG00000021645.20	transcript	ENST00000335750.7	protein_coding	15/20		INFO_REALIGN_3_PRIME	chr14	TogoVar
NRXN3_chr14_78165373_79873291	79638330	GTTTGAGT others(5): Show GTTTGAGTTCTTT	G G	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01109.hp2	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0016 a0002c0005t0016	a0002c0005t0016g0022 a0002c0005t0016g0022	1	24	0.0417	-12	c.344 others(33): Show c.3445-25445_3445-25434delTGAGTTCTTTTT	NRXN3	ENSG00000021645.20	transcript	ENST00000335750.7	protein_coding	16/20		INFO_REALIGN_3_PRIME	chr14	TogoVar
NRXN3_chr14_78165373_79873291	79740710	TTTTATAT others(5): Show TTTTATATATATA	T T	intron_variant intron_variant	MODIFIER	HG01884.hp1 NA19240.hp1 HG01884.hp1 NA19240.hp1	a0001 a0001	a0001c0003 a0001c0006 a0001c0003 a0001c0006	a0001c0003t0009 a0001c0006t0017 a0001c0003t0009 a0001c0006t0017	a0001c0003t0009g0024 a0001c0006t0017g0001 a0001c0003t0009g0024 a0001c0006t0017g0001	2	24	0.0833	-12	c.401 others(33): Show c.4014+42775_4014+42786delTTATATATATAT	NRXN3	ENSG00000021645.20	transcript	ENST00000335750.7	protein_coding	19/20		INFO_REALIGN_3_PRIME	chr14	TogoVar
NRXN3_chr14_78165373_79873291	79754503	GATATATA others(5): Show GATATATATATAT	G G	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01109.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0013 a0001c0001t0003g0013	1	24	0.0417	-12	c.401 others(33): Show c.4015-50560_4015-50549delATATATATATAT	NRXN3	ENSG00000021645.20	transcript	ENST00000335750.7	protein_coding	19/20		INFO_REALIGN_3_PRIME	chr14	TogoVar
NRXN3_chr14_78165373_79873291	79793416	AAAAAACA others(5): Show AAAAAACAAAAAC	A A	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0015 a0001c0002t0015	a0001c0002t0015g0011 a0001c0002t0015g0011	1	24	0.0417	-12	c.401 others(33): Show c.4015-11680_4015-11669delAACAAAAACAAA	NRXN3	ENSG00000021645.20	transcript	ENST00000335750.7	protein_coding	19/20		INFO_REALIGN_3_PRIME	chr14	TogoVar
NRXN3_chr14_78165373_79873291	79806956	ATATATAT others(5): Show ATATATATTTTTT	A A	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0005 a0001c0004t0005	a0001c0004t0005g0003 a0001c0004t0005g0003	1	24	0.0417	-12	c.409 others(31): Show c.4093+1768_4093+1779delATATATTTTTTT	NRXN3	ENSG00000021645.20	transcript	ENST00000335750.7	protein_coding	20/20		INFO_REALIGN_3_PRIME	chr14	TogoVar
NRXN3_chr14_78165373_79873291	79806960	ATATTTTT others(5): Show ATATTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0008 a0001c0001t0008g0008	1	24	0.0417	-12	c.409 others(31): Show c.4093+1772_4093+1783delATTTTTTTTTTT	NRXN3	ENSG00000021645.20	transcript	ENST00000335750.7	protein_coding	20/20		INFO_REALIGN_3_PRIME	chr14	TogoVar
NRXN3_chr14_78165373_79873291	79852234	AACACACA others(5): Show AACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG03453.hp1 HG02922.hp2 HG03453.hp1	a0001 a0001	a0001c0002 a0001c0004 a0001c0002 a0001c0004	a0001c0002t0011 a0001c0004t0006 a0001c0002t0011 a0001c0004t0006	a0001c0002t0011g0016 a0001c0004t0006g0021 a0001c0002t0011g0016 a0001c0004t0006g0021	2	24	0.0833	-12	c.409 others(31): Show c.4094-9073_4094-9062delACACACACACAC	NRXN3	ENSG00000021645.20	transcript	ENST00000335750.7	protein_coding	20/20		INFO_REALIGN_3_PRIME	chr14	TogoVar
NSD1_chr5_177128773_177305213	177141319	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02451.hp1	a0004 a0004	a0004c0013 a0004c0013	a0004c0013t0001 a0004c0013t0001	a0004c0013t0001g0105 a0004c0013t0001g0105	1	298	0.0034	-12	c.927 others(29): Show c.927+5307_927+5318delTTTTTTTTTTTT	NSD1	ENSG00000165671.22	transcript	ENST00000439151.7	protein_coding	2/22		INFO_REALIGN_3_PRIME	chr5	TogoVar
NSD1_chr5_177128773_177305213	177152315	GTGTGTGT others(5): Show GTGTGTGTATGTA	G G	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02738.hp1 HG02280.hp1 HG02738.hp1	a0009 a0009	a0009c0012 a0009c0012	a0009c0012t0060 a0009c0012t0061 a0009c0012t0060 a0009c0012t0061	a0009c0012t0060g0141 a0009c0012t0061g0140 a0009c0012t0060g0141 a0009c0012t0061g0140	2	298	0.0067	-12	c.927 others(31): Show c.927+16289_927+16300delGTGTATGTATGT	NSD1	ENSG00000165671.22	transcript	ENST00000439151.7	protein_coding	2/22		INFO_REALIGN_3_PRIME	chr5	TogoVar
NSD1_chr5_177128773_177305213	177152319	GTGTATGT others(5): Show GTGTATGTATGTA	G G	intron_variant intron_variant	MODIFIER	HG02129.hp2 HG02451.hp1 HG06807.hp1 others(1): Show HG02129.hp2 HG02451.hp1 HG06807.hp1 NA21309.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0013 a0004c0026 a0001c0001 a0004c0013 a0004c0026	a0001c0001t0033 a0004c0013t0001 a0004c0013t0020 others(1): Show a0001c0001t0033 a0004c0013t0001 a0004c0013t0020 a0004c0026t0003	a0001c0001t0033g0172 a0004c0013t0001g0105 a0004c0013t0020g0103 others(1): Show a0001c0001t0033g0172 a0004c0013t0001g0105 a0004c0013t0020g0103 a0004c0026t0003g0104	4	298	0.0134	-12	c.927 others(31): Show c.927+16321_927+16332delATGTATGTATGT	NSD1	ENSG00000165671.22	transcript	ENST00000439151.7	protein_coding	2/22		INFO_REALIGN_3_PRIME	chr5	TogoVar
NSD1_chr5_177128773_177305213	177158237	ATTTCTTT others(5): Show ATTTCTTTCTTTC	A A	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01192.hp1 HG01256.hp2 others(6): Show HG00642.hp2 HG01192.hp1 HG01256.hp2 HG01517.hp2 HG01928.hp1 HG02451.hp1 HG02896.hp2 HG02897.hp1 homoSapiens_chm13v2.hp1	a0001 a0004 a0006 a0001 a0004 a0006	a0001c0001 a0004c0013 a0006c0008 a0001c0001 a0004c0013 a0006c0008	a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 others(5): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0011 a0001c0001t0032 a0004c0013t0001 a0006c0008t0021 a0006c0008t0062	a0001c0001t0002g0149 a0001c0001t0002g0247 a0001c0001t0004g0230 others(6): Show a0001c0001t0002g0149 a0001c0001t0002g0247 a0001c0001t0004g0230 a0001c0001t0005g0250 a0001c0001t0011g0173 a0001c0001t0032g0155 a0004c0013t0001g0105 a0006c0008t0021g0143 a0006c0008t0062g0144	9	298	0.0302	-12	c.927 others(31): Show c.927+22263_927+22274delCTTTCTTTCTTT	NSD1	ENSG00000165671.22	transcript	ENST00000439151.7	protein_coding	2/22		INFO_REALIGN_3_PRIME	chr5	TogoVar
NSD1_chr5_177128773_177305213	177194694	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00642.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0012 a0001c0004t0012	a0001c0004t0012g0259 a0001c0004t0012g0259	1	298	0.0034	-12	c.106 others(31): Show c.1063+2689_1063+2700delTTTTTTTTTTTT	NSD1	ENSG00000165671.22	transcript	ENST00000439151.7	protein_coding	3/22		INFO_REALIGN_3_PRIME	chr5	TogoVar
NSD1_chr5_177128773_177305213	177207905	AGTGTGTG others(5): Show AGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0004 a0004	a0004c0029 a0004c0029	a0004c0029t0065 a0004c0029t0065	a0004c0029t0065g0146 a0004c0029t0065g0146	1	298	0.0034	-12	c.123 others(31): Show c.1237-1725_1237-1714delTGTGTGTGTGTG	NSD1	ENSG00000165671.22	transcript	ENST00000439151.7	protein_coding	4/22		INFO_REALIGN_3_PRIME	chr5	TogoVar
NSD1_chr5_177128773_177305213	177207911	TGTGTGTG others(5): Show TGTGTGTGTGTGC	T T	intron_variant intron_variant	MODIFIER	HG03490.hp1 HG03490.hp1	a0003 a0003	a0003c0006 a0003c0006	a0003c0006t0009 a0003c0006t0009	a0003c0006t0009g0158 a0003c0006t0009g0158	1	298	0.0034	-12	c.123 others(31): Show c.1237-1713_1237-1702delCGTGTGTGTGTG	NSD1	ENSG00000165671.22	transcript	ENST00000439151.7	protein_coding	4/22		INFO_REALIGN_3_PRIME	chr5	TogoVar
NSD1_chr5_177128773_177305213	177252539	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0018 a0018	a0018c0019 a0018c0019	a0018c0019t0002 a0018c0019t0002	a0018c0019t0002g0265 a0018c0019t0002g0265	1	298	0.0034	-12	c.476 others(29): Show c.4765+705_4765+716delTTTTTTTTTTTT	NSD1	ENSG00000165671.22	transcript	ENST00000439151.7	protein_coding	12/22		INFO_REALIGN_3_PRIME	chr5	TogoVar
NSD1_chr5_177128773_177305213	177257973	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0004 a0004	a0004c0013 a0004c0013	a0004c0013t0020 a0004c0013t0020	a0004c0013t0020g0103 a0004c0013t0020g0103	1	298	0.0034	-12	c.496 others(29): Show c.4966+835_4966+846delTTTTTTTTTTTT	NSD1	ENSG00000165671.22	transcript	ENST00000439151.7	protein_coding	13/22		INFO_REALIGN_3_PRIME	chr5	TogoVar
NSD1_chr5_177128773_177305213	177279610	ATTTTTTT others(5): Show ATTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02965.hp2 HG02965.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0049 a0001c0003t0049	a0001c0003t0049g0111 a0001c0003t0049g0111	1	298	0.0034	-12	c.562 others(29): Show c.5623-938_5623-927delTTTTTTTTTTTT	NSD1	ENSG00000165671.22	transcript	ENST00000439151.7	protein_coding	17/22		INFO_REALIGN_3_PRIME	chr5	TogoVar
NSD2_chr4_1866393_1987192	1878251	ATTTTTTT others(5): Show ATTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00140.hp2	a0003 a0003	a0003c0007 a0003c0007	a0003c0007t0001 a0003c0007t0001	a0003c0007t0001g0126 a0003c0007t0001g0126	1	130	0.0077	-12	c.-30 others(29): Show c.-30+6731_-30+6742delTTTTTTTTTTTT	NSD2	ENSG00000109685.19	transcript	ENST00000508803.6	protein_coding	1/21		INFO_REALIGN_3_PRIME	chr4	TogoVar
NSD2_chr4_1866393_1987192	1879824	TTGTGTGT others(5): Show TTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02559.hp1	a0002 a0002	a0002c0010 a0002c0010	a0002c0010t0016 a0002c0010t0016	a0002c0010t0016g0105 a0002c0010t0016g0105	1	130	0.0077	-12	c.-30 others(29): Show c.-30+8306_-30+8317delGTGTGTGTGTGT	NSD2	ENSG00000109685.19	transcript	ENST00000508803.6	protein_coding	1/21		INFO_REALIGN_3_PRIME	chr4	TogoVar
NSD2_chr4_1866393_1987192	1934872	AAAAAAAA others(5): Show AAAAAAAATATAT	A A	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0014 a0001c0001t0014	a0001c0001t0014g0115 a0001c0001t0014g0115	1	130	0.0077	-12	c.155 others(29): Show c.1556-270_1556-259delAAAAAATATATA	NSD2	ENSG00000109685.19	transcript	ENST00000508803.6	protein_coding	6/21		INFO_REALIGN_3_PRIME	chr4	TogoVar
NSD2_chr4_1866393_1987192	1951443	TACACACA others(5): Show TACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG01934.hp1 HG01934.hp2 others(12): Show HG00280.hp2 HG01934.hp1 HG01934.hp2 HG01975.hp2 HG02622.hp1 HG02886.hp1 HG02922.hp1 HG03041.hp1 HG03139.hp2 HG03195.hp1 HG03453.hp2 HG03471.hp2 NA18971.hp1 NA18971.hp2 NA19000.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 a0001c0001t0007	a0001c0001t0001g0005 a0001c0001t0001g0009 a0001c0001t0001g0012 others(12): Show a0001c0001t0001g0005 a0001c0001t0001g0009 a0001c0001t0001g0012 a0001c0001t0001g0016 a0001c0001t0001g0039 a0001c0001t0001g0064 a0001c0001t0001g0070 a0001c0001t0001g0077 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0118 a0001c0001t0001g0121 a0001c0001t0003g0096 a0001c0001t0006g0014 a0001c0001t0007g0123	15	130	0.1154	-12	c.201 others(29): Show c.2013+310_2013+321delCACACACACACA	NSD2	ENSG00000109685.19	transcript	ENST00000508803.6	protein_coding	10/21		INFO_REALIGN_3_PRIME	chr4	TogoVar
NSDHL_chrX_152826063_152874729	152872533	TGTGTGTT others(5): Show TGTGTGTTTGTGG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp1 HG01515.hp1 HG00639.hp1 HG01515.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0170 a0001c0001t0002g0142 a0001c0001t0001g0170 a0001c0001t0002g0142	2	324	0.0062	-12	c.34 others(23): Show c.3418_*3429delGTGTGTTTGTGG	NSDHL	ENSG00000147383.11	transcript	ENST00000370274.8	protein_coding		2805		chrX	TogoVar
NSDHL_chrX_152826063_152874729	152872552	TTGTGTGT others(5): Show TTGTGTGTGTGGG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG04228.hp1 HG04228.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	324	0.0031	-12	c.34 others(23): Show c.3437_*3448delTGTGTGTGTGGG	NSDHL	ENSG00000147383.11	transcript	ENST00000370274.8	protein_coding		2824		chrX	TogoVar
NSDHL_chrX_152826063_152874729	152872649	TTTGTGGG others(5): Show TTTGTGGGTGTGC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG00558.hp1 HG00609.hp1 others(53): Show HG00099.hp2 HG00558.hp1 HG00609.hp1 HG00639.hp1 HG00735.hp1 HG00741.hp1 HG01069.hp1 HG01070.hp2 HG01071.hp1 HG01074.hp1 HG01099.hp1 HG01168.hp1 HG01169.hp2 HG01261.hp1 HG01358.hp1 HG01433.hp1 HG01496.hp2 HG01515.hp1 HG01516.hp1 HG01516.hp2 HG01884.hp2 HG01943.hp1 HG01952.hp1 HG01978.hp1 HG01993.hp1 HG02080.hp2 HG02148.hp2 HG02273.hp2 HG02683.hp1 HG02683.hp2 HG02735.hp1 HG02896.hp2 HG03017.hp1 HG03041.hp1 HG03516.hp1 HG03688.hp1 HG03704.hp2 HG03831.hp1 HG03942.hp1 HG04228.hp1 NA18940.hp1 NA18943.hp1 NA18945.hp1 NA18946.hp2 NA18951.hp1 NA18980.hp1 NA18989.hp1 NA18991.hp2 NA18994.hp1 NA19003.hp1 NA19010.hp1 NA19062.hp1 NA19065.hp1 NA19078.hp1 NA19081.hp2 NA19087.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0002t0001	a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0007 others(36): Show a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0007 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0035 a0001c0001t0001g0074 a0001c0001t0001g0085 a0001c0001t0001g0090 a0001c0001t0001g0115 a0001c0001t0001g0123 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0157 a0001c0001t0001g0160 a0001c0001t0001g0162 a0001c0001t0001g0165 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0174 a0001c0001t0001g0181 a0001c0001t0001g0185 a0001c0001t0002g0003 a0001c0001t0002g0007 a0001c0001t0002g0018 a0001c0001t0002g0033 a0001c0001t0002g0040 a0001c0001t0002g0052 a0001c0001t0002g0127 a0001c0001t0002g0142 a0001c0001t0002g0153 a0001c0001t0002g0163 a0001c0001t0002g0164 a0001c0001t0002g0166 a0001c0001t0002g0175 a0001c0001t0005g0144 a0001c0001t0005g0183 a0001c0002t0001g0066	56	324	0.1728	-12	c.35 others(23): Show c.3534_*3545delTTGTGGGTGTGC	NSDHL	ENSG00000147383.11	transcript	ENST00000370274.8	protein_coding		2921		chrX	TogoVar
NSDHL_chrX_152826063_152874729	152872655	GGTGTGCG others(5): Show GGTGTGCGGGTGT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA20805.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0032 a0001c0001t0001g0032	1	324	0.0031	-12	c.35 others(23): Show c.3540_*3551delGTGTGCGGGTGT	NSDHL	ENSG00000147383.11	transcript	ENST00000370274.8	protein_coding		2927		chrX	TogoVar
NSDHL_chrX_152826063_152874729	152872733	GGTGTGTG others(5): Show GGTGTGTGTGTTT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00558.hp2 HG01884.hp1 HG02896.hp2 others(4): Show HG00558.hp2 HG01884.hp1 HG02896.hp2 HG03139.hp1 HG03669.hp2 NA19062.hp1 NA19085.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 others(1): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 a0001c0001t0009	a0001c0001t0001g0001 a0001c0001t0001g0013 a0001c0001t0001g0085 others(4): Show a0001c0001t0001g0001 a0001c0001t0001g0013 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0005g0144 a0001c0001t0006g0187 a0001c0001t0009g0186	7	324	0.0216	-12	c.36 others(23): Show c.3618_*3629delGTGTGTGTGTTT	NSDHL	ENSG00000147383.11	transcript	ENST00000370274.8	protein_coding		3005		chrX	TogoVar
NSG1_chr4_4382102_4424058	4385294	CAAGTGTG others(5): Show CAAGTGTGTGTGT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0043 a0001c0001t0009g0043	1	394	0.0025	-12	c.-19 others(23): Show c.-1905_-1894delAAGTGTGTGTGT	NSG1	ENSG00000168824.15	transcript	ENST00000621129.5	protein_coding		1807		chr4	TogoVar
NSG1_chr4_4382102_4424058	4385296	AGTGTGTG others(5): Show AGTGTGTGTGTGT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02293.hp2 HG02293.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0112 a0001c0001t0001g0112	1	394	0.0025	-12	c.-19 others(23): Show c.-1903_-1892delGTGTGTGTGTGT	NSG1	ENSG00000168824.15	transcript	ENST00000621129.5	protein_coding		1805		chr4	TogoVar
NSG1_chr4_4382102_4424058	4385321	GTGTGTGT others(5): Show GTGTGTGTGTGTT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02258.hp2 HG02622.hp1 HG02630.hp1 others(7): Show HG02258.hp2 HG02622.hp1 HG02630.hp1 HG02647.hp2 HG03041.hp2 HG03209.hp2 HG03453.hp2 HG03540.hp1 HG03579.hp1 NA18906.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 others(4): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 a0001c0001t0008 a0001c0001t0011 a0001c0001t0019 a0001c0001t0020	a0001c0001t0001g0021 a0001c0001t0001g0045 a0001c0001t0001g0176 others(6): Show a0001c0001t0001g0021 a0001c0001t0001g0045 a0001c0001t0001g0176 a0001c0001t0003g0046 a0001c0001t0006g0047 a0001c0001t0008g0018 a0001c0001t0011g0066 a0001c0001t0019g0048 a0001c0001t0020g0067	10	394	0.0254	-12	c.-18 others(23): Show c.-1878_-1867delTGTGTGTGTGTT	NSG1	ENSG00000168824.15	transcript	ENST00000621129.5	protein_coding		1780		chr4	TogoVar
NSG2_chr5_174040706_174114179	174066989	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03927.hp2 HG03927.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0126 a0001c0001t0001g0126	1	294	0.0034	-12	c.213 others(29): Show c.213+2690_213+2701delAAAAAAAAAAAA	NSG2	ENSG00000170091.11	transcript	ENST00000303177.8	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr5	TogoVar
NSG2_chr5_174040706_174114179	174080501	TTCTTTCT others(5): Show TTCTTTCTTTCCC	T T	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01169.hp1 HG02083.hp1 HG01167.hp2 HG01169.hp1 HG02083.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0215 a0001c0001t0004g0011 a0001c0001t0001g0215 a0001c0001t0004g0011	3	294	0.0102	-12	c.213 others(31): Show c.213+16197_213+16208delCCTCTTTCTTTC	NSG2	ENSG00000170091.11	transcript	ENST00000303177.8	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr5	TogoVar
NSG2_chr5_174040706_174114179	174091644	GGTGTGTG others(5): Show GGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	NA18953.hp2 NA19058.hp2 NA19086.hp2 NA18953.hp2 NA19058.hp2 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0010 a0001c0001t0001 a0001c0001t0010	a0001c0001t0001g0130 a0001c0001t0001g0216 a0001c0001t0010g0142 a0001c0001t0001g0130 a0001c0001t0001g0216 a0001c0001t0010g0142	3	294	0.0102	-12	c.214 others(31): Show c.214-12553_214-12542delGTGTGTGTGTGT	NSG2	ENSG00000170091.11	transcript	ENST00000303177.8	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr5	TogoVar
NSG2_chr5_174040706_174114179	174102750	TTTTTTTT others(5): Show TTTTTTTTATTTA	T T	intron_variant intron_variant	MODIFIER	HG02055.hp2 NA19005.hp2 HG02055.hp2 NA19005.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0002 a0001c0003t0003 a0001c0001t0002 a0001c0003t0003	a0001c0001t0002g0031 a0001c0003t0003g0202 a0001c0001t0002g0031 a0001c0003t0003g0202	2	294	0.0068	-12	c.214 others(29): Show c.214-1474_214-1463delTTTTATTTATTT	NSG2	ENSG00000170091.11	transcript	ENST00000303177.8	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr5	TogoVar
NSG2_chr5_174040706_174114179	174102754	TTTTATTT others(5): Show TTTTATTTATTTA	T T	intron_variant intron_variant	MODIFIER	HG02293.hp2 HG02293.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0280 a0001c0001t0001g0280	1	294	0.0034	-12	c.214 others(29): Show c.214-1441_214-1430delTTTATTTATTTA	NSG2	ENSG00000170091.11	transcript	ENST00000303177.8	protein_coding	3/4		INFO_REALIGN_3_PRIME	chr5	TogoVar
NSG2_chr5_174040706_174114179	174106583	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG03927.hp1 NA20905.hp2 HG00280.hp1 HG03927.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0010 a0001c0001t0008g0275 a0001c0001t0008g0010 a0001c0001t0008g0275	3	294	0.0102	-12	c.325 others(27): Show c.325-713_325-702delTTTTTTTTTTTT	NSG2	ENSG00000170091.11	transcript	ENST00000303177.8	protein_coding	4/4		INFO_REALIGN_3_PRIME	chr5	TogoVar
NSG2_chr5_174040706_174114179	174114161	GTGTCATT others(5): Show GTGTCATTGCTTC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01884.hp2 HG01884.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0237 a0001c0001t0002g0237	1	294	0.0034	-12	c.66 others(23): Show c.6657_*6668delTGTCATTGCTTC	NSG2	ENSG00000170091.11	transcript	ENST00000303177.8	protein_coding		4983		chr5	TogoVar
NSL1_chr1_212721153_212796777	212723210	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02071.hp2 HG02071.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0049 a0003c0003t0049	a0003c0003t0049g0338 a0003c0003t0049g0338	1	364	0.0028	-12	c.15 others(25): Show c.15186_*15197delAAAAAAAAAAAA	NSL1	ENSG00000117697.15	transcript	ENST00000366977.8	protein_coding		2942		chr1	TogoVar
NSL1_chr1_212721153_212796777	212730237	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02922.hp1 HG03041.hp1 HG03453.hp2 others(2): Show HG02922.hp1 HG03041.hp1 HG03453.hp2 NA18906.hp1 NA20129.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0014 a0002c0002t0014	a0002c0002t0014g0004 a0002c0002t0014g0018 a0002c0002t0014g0089 others(1): Show a0002c0002t0014g0004 a0002c0002t0014g0018 a0002c0002t0014g0089 a0002c0002t0014g0090	5	364	0.0137	-12	c.81 others(23): Show c.8159_*8170delTTTTTTTTTTTT	NSL1	ENSG00000117697.15	transcript	ENST00000366977.8	protein_coding	6/6	8159		chr1	TogoVar
NSL1_chr1_212721153_212796777	212764843	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA18992.hp2 NA18992.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0189 a0001c0001t0001g0189	1	364	0.0028	-12	c.499 others(31): Show c.499+17517_499+17528delTTTTTTTTTTTT	NSL1	ENSG00000117697.15	transcript	ENST00000366977.8	protein_coding	4/5			chr1	TogoVar
NSMCE1_chr16_27219994_27273772	27251179	TATATATA others(5): Show TATATATATATAA	T T	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02647.hp1 HG02896.hp2 others(3): Show HG02615.hp1 HG02647.hp1 HG02896.hp2 HG03130.hp2 HG03540.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 others(3): Show a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0275 a0001c0001t0001g0276	6	334	0.0180	-12	c.136 others(29): Show c.136+6244_136+6255delTTATATATATAT	NSMCE1	ENSG00000169189.17	transcript	ENST00000361439.9	protein_coding	2/7			chr16	TogoVar
NSMCE2_chr8_125086860_125372120	125153056	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01070.hp1 HG01071.hp2 HG01109.hp1 others(9): Show HG01070.hp1 HG01071.hp2 HG01109.hp1 HG01243.hp1 HG01891.hp1 HG02257.hp1 HG02572.hp2 HG02647.hp2 HG02970.hp2 HG03130.hp2 HG03579.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0065 a0001c0001t0001g0173 a0001c0001t0001g0174 others(9): Show a0001c0001t0001g0065 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0231 a0001c0001t0001g0232	12	244	0.0492	-12	c.264 others(29): Show c.264+1793_264+1804delAAAAAAAAAAAA	NSMCE2	ENSG00000156831.8	transcript	ENST00000287437.8	protein_coding	4/7		INFO_REALIGN_3_PRIME	chr8	TogoVar
NSMCE2_chr8_125086860_125372120	125170376	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02735.hp2 NA18951.hp1 NA19060.hp2 HG02735.hp2 NA18951.hp1 NA19060.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0045 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0045 a0001c0001t0001g0101 a0001c0001t0001g0102	3	244	0.0123	-12	c.265 others(31): Show c.265-11699_265-11688delTTTTTTTTTTTT	NSMCE2	ENSG00000156831.8	transcript	ENST00000287437.8	protein_coding	4/7		INFO_REALIGN_3_PRIME	chr8	TogoVar
NSMCE2_chr8_125086860_125372120	125256922	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01928.hp2 HG01928.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0229 a0001c0001t0001g0229	1	244	0.0041	-12	c.418 others(31): Show c.418+74692_418+74703delAAAAAAAAAAAA	NSMCE2	ENSG00000156831.8	transcript	ENST00000287437.8	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr8	TogoVar
NSMCE2_chr8_125086860_125372120	125256948	AAAAAAAA others(5): Show AAAAAAAAAAAAG	A A	intron_variant intron_variant	MODIFIER	HG00609.hp2 HG02015.hp1 HG02040.hp2 others(4): Show HG00609.hp2 HG02015.hp1 HG02040.hp2 NA18961.hp1 NA18965.hp1 NA18978.hp2 NA18988.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0025 a0001c0001t0001g0097 a0001c0001t0001g0117 others(4): Show a0001c0001t0001g0025 a0001c0001t0001g0097 a0001c0001t0001g0117 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124	7	244	0.0287	-12	c.418 others(31): Show c.418+74694_418+74705delAAAAAAAAAAGA	NSMCE2	ENSG00000156831.8	transcript	ENST00000287437.8	protein_coding	5/7		INFO_REALIGN_3_PRIME	chr8	TogoVar

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