Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff genename

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Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
PBX3_chr9_125742373_125972377	125802359	ATTTTTTT others(5): Show ATTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0083 a0001c0001t0002g0083	1	294	0.0034	-12	c.274 others(31): Show c.274+53750_274+53761delTTTTTTTTTTTT		PBX3	ENSG00000167081.18	transcript	ENST00000373489.10	protein_coding	2/8					INFO_REALIGN_3_PRIME	chr9	TogoVar
PBX3_chr9_125742373_125972377	125970233	ATGTGTGT others(5): Show ATGTGTGTGTGTG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01109.hp2 HG02723.hp2 HG02818.hp2 others(1): Show HG01109.hp2 HG02723.hp2 HG02818.hp2 HG02895.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0001 a0001c0001t0005	a0001c0001t0001g0282 a0001c0001t0001g0283 a0001c0001t0005g0004 others(1): Show a0001c0001t0001g0282 a0001c0001t0001g0283 a0001c0001t0005g0004 a0001c0001t0005g0005	4	294	0.0136	-12	c.43 others(23): Show c.4311_*4322delTGTGTGTGTGTG		PBX3	ENSG00000167081.18	transcript	ENST00000373489.10	protein_coding					2857		chr9	TogoVar
PBXIP1_chr1_154939080_154961099	154945869	AAAGTCAG others(5): Show AAAGTCAGGCCCT	A A	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	HG02132.hp1 HG02132.hp1	a0006 a0006	a0006c0009 a0006c0009	a0006c0009t0001 a0006c0009t0001	a0006c0009t0001g0058 a0006c0009t0001g0058	1	286	0.0035	-12	c.179 others(21): Show c.1793_1804delAGGGCCTGACTT	p.Glu others(19): Show p.Glu598_Phe602delinsVal	PBXIP1	ENSG00000163346.17	transcript	ENST00000368463.8	protein_coding	10/11	1871/3207	1793/2196	598/731			chr1	TogoVar
PCBD1_chr10_70878510_70893565	70887918	GCCCCGCC others(5): Show GCCCCGCCCCCGC	G G	intron_variant intron_variant	MODIFIER	HG02735.hp1 HG03239.hp2 HG03490.hp2 HG02735.hp1 HG03239.hp2 HG03490.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0021 a0001c0001t0002g0021	3	448	0.0067	-12	c.3+6 others(23): Show c.3+601_3+612delGCGGGGGCGGGG		PCBD1	ENSG00000166228.9	transcript	ENST00000299299.4	protein_coding	1/3						chr10	TogoVar
PCBD2_chr5_134900131_134967644	134964765	TTTGAAAG others(5): Show TTTGAAAGAGATA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01981.hp1 HG01981.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0086 a0001c0001t0001g0086	1	330	0.0030	-12	c.40 others(23): Show c.4085_*4096delTTGAAAGAGATA		PCBD2	ENSG00000132570.15	transcript	ENST00000254908.11	protein_coding					2122		chr5	TogoVar
PCBP1_chr2_70082477_70094203	70093003	AGTTTTTG others(5): Show AGTTTTTGTTGTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19065.hp1 NA19065.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	404	0.0025	-12	c.41 others(23): Show c.4190_*4201delGTTTTTGTTGTT		PCBP1	ENSG00000169564.7	transcript	ENST00000303577.7	protein_coding					3801		chr2	TogoVar
PCBP1_chr2_70082477_70094203	70093007	TTTGTTGT others(5): Show TTTGTTGTTGTTG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02055.hp1 HG02257.hp1 HG03471.hp2 others(2): Show HG02055.hp1 HG02257.hp1 HG03471.hp2 NA18960.hp1 NA18994.hp2	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0004t0001 a0001c0001t0001 a0001c0004t0001	a0001c0001t0001g0000 a0001c0004t0001g0000 a0001c0001t0001g0000 a0001c0004t0001g0000	5	404	0.0124	-12	c.41 others(23): Show c.4194_*4205delTTGTTGTTGTTG		PCBP1	ENSG00000169564.7	transcript	ENST00000303577.7	protein_coding					3805		chr2	TogoVar
PCBP2_chr12_53447102_53486162	53451331	CATATATA others(5): Show CATATATATATAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00735.hp2 HG01167.hp1 HG01169.hp2 others(52): Show HG00735.hp2 HG01167.hp1 HG01169.hp2 HG01433.hp1 HG01952.hp1 HG01978.hp1 HG02074.hp2 HG02451.hp2 HG02559.hp2 HG02622.hp2 HG02683.hp2 HG02723.hp1 HG02886.hp1 HG02886.hp2 HG02965.hp1 HG02970.hp2 HG03017.hp1 HG03041.hp1 HG03130.hp1 HG03239.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03579.hp1 HG03688.hp2 HG04184.hp2 NA18612.hp2 NA18944.hp1 NA18946.hp2 NA18948.hp1 NA18948.hp2 NA18955.hp2 NA18956.hp2 NA18959.hp1 NA18962.hp1 NA18967.hp1 NA18971.hp2 NA18975.hp1 NA18978.hp2 NA18983.hp2 NA18987.hp2 NA18991.hp2 NA18993.hp2 NA18994.hp2 NA18998.hp1 NA19000.hp2 NA19005.hp2 NA19011.hp1 NA19030.hp1 NA19062.hp2 NA19070.hp2 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(11): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0015 a0001c0001t0018 a0001c0001t0028 a0001c0001t0031 a0001c0001t0033 a0001c0002t0001 a0001c0003t0006	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0006 others(48): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0014 a0001c0001t0001g0019 a0001c0001t0001g0021 a0001c0001t0001g0024 a0001c0001t0001g0041 a0001c0001t0001g0047 a0001c0001t0001g0072 a0001c0001t0001g0075 a0001c0001t0001g0079 a0001c0001t0001g0090 a0001c0001t0001g0096 a0001c0001t0001g0101 a0001c0001t0001g0111 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0202 a0001c0001t0001g0204 a0001c0001t0001g0215 a0001c0001t0001g0226 a0001c0001t0001g0228 a0001c0001t0001g0231 a0001c0001t0001g0236 a0001c0001t0001g0245 a0001c0001t0001g0249 a0001c0001t0001g0251 a0001c0001t0001g0252 a0001c0001t0001g0275 a0001c0001t0002g0037 a0001c0001t0002g0260 a0001c0001t0003g0002 a0001c0001t0003g0225 a0001c0001t0004g0002 a0001c0001t0007g0282 a0001c0001t0007g0283 a0001c0001t0007g0284 a0001c0001t0008g0064 a0001c0001t0008g0183 a0001c0001t0009g0036 a0001c0001t0015g0023 a0001c0001t0018g0092 a0001c0001t0028g0040 a0001c0001t0031g0002 a0001c0001t0033g0114 a0001c0002t0001g0039 a0001c0003t0006g0020	55	348	0.1581	-12	c.-11 others(23): Show c.-1120_-1109delATATATATATAT		PCBP2	ENSG00000197111.16	transcript	ENST00000546463.6	protein_coding					770		chr12	TogoVar
PCBP2_chr12_53447102_53486162	53477665	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG03130.hp1 HG03540.hp1 others(2): Show HG02559.hp2 HG03130.hp1 HG03540.hp1 NA19089.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0028 a0001c0001t0001 a0001c0001t0028	a0001c0001t0001g0014 a0001c0001t0001g0041 a0001c0001t0001g0171 others(1): Show a0001c0001t0001g0014 a0001c0001t0001g0041 a0001c0001t0001g0171 a0001c0001t0028g0040	5	348	0.0144	-12	c.105 others(31): Show c.1053-1723_1053-1712delAAAAAAAAAAAA		PCBP2	ENSG00000197111.16	transcript	ENST00000546463.6	protein_coding	14/14					INFO_REALIGN_3_PRIME	chr12	TogoVar
PCBP3_chr21_45638725_45947450	45659337	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG02717.hp2 HG02559.hp1 HG02717.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0242 a0001c0001t0002g0251 a0001c0001t0002g0242 a0001c0001t0002g0251	2	292	0.0069	-12	c.-27 others(31): Show c.-278-9525_-278-9514delTTTTTTTTTTTT		PCBP3	ENSG00000183570.17	transcript	ENST00000681687.1	protein_coding	1/17					INFO_REALIGN_3_PRIME	chr21	TogoVar
PCBP3_chr21_45638725_45947450	45662271	GTTTTTTT others(5): Show GTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG01123.hp1 HG04115.hp1 NA18955.hp1 HG01123.hp1 HG04115.hp1 NA18955.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0013 a0001c0001t0001 a0001c0001t0013	a0001c0001t0001g0144 a0001c0001t0001g0191 a0001c0001t0013g0182 a0001c0001t0001g0144 a0001c0001t0001g0191 a0001c0001t0013g0182	3	292	0.0103	-12	c.-27 others(31): Show c.-278-6584_-278-6573delTTTTTTTTTTTT		PCBP3	ENSG00000183570.17	transcript	ENST00000681687.1	protein_coding	1/17					INFO_REALIGN_3_PRIME	chr21	TogoVar
PCBP3_chr21_45638725_45947450	45667075	GTTCTTTC others(5): Show GTTCTTTCTTTCT	G G	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01243.hp1 HG01928.hp2 others(42): Show HG01099.hp1 HG01243.hp1 HG01928.hp2 HG01934.hp1 HG01943.hp1 HG02004.hp2 HG02027.hp2 HG02080.hp1 HG02083.hp1 HG02129.hp1 HG02145.hp2 HG02257.hp1 HG02273.hp1 HG02615.hp1 HG02809.hp1 HG02809.hp2 HG02818.hp2 HG02886.hp2 HG02895.hp1 HG02896.hp1 HG02965.hp1 HG03195.hp1 HG03209.hp1 HG03942.hp1 HG04204.hp1 NA18522.hp2 NA18747.hp2 NA18906.hp2 NA18940.hp2 NA18943.hp2 NA18951.hp2 NA18957.hp1 NA18963.hp2 NA18967.hp1 NA18969.hp2 NA18970.hp2 NA18982.hp2 NA18984.hp2 NA18985.hp1 NA19002.hp2 NA19005.hp2 NA19043.hp2 NA19064.hp2 NA19065.hp1 NA19079.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0002 a0001c0001t0003 a0001c0001t0021 others(1): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0021 a0001c0004t0002	a0001c0001t0002g0001 a0001c0001t0002g0034 a0001c0001t0002g0049 others(42): Show a0001c0001t0002g0001 a0001c0001t0002g0034 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0052 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0089 a0001c0001t0003g0008 a0001c0001t0003g0028 a0001c0001t0003g0029 a0001c0001t0003g0030 a0001c0001t0003g0032 a0001c0001t0003g0035 a0001c0001t0003g0037 a0001c0001t0003g0038 a0001c0001t0003g0039 a0001c0001t0003g0040 a0001c0001t0003g0041 a0001c0001t0003g0042 a0001c0001t0003g0043 a0001c0001t0003g0044 a0001c0001t0003g0048 a0001c0001t0003g0051 a0001c0001t0003g0056 a0001c0001t0003g0068 a0001c0001t0003g0069 a0001c0001t0003g0070 a0001c0001t0003g0071 a0001c0001t0003g0074 a0001c0001t0003g0075 a0001c0001t0003g0076 a0001c0001t0003g0077 a0001c0001t0003g0078 a0001c0001t0003g0079 a0001c0001t0003g0080 a0001c0001t0003g0081 a0001c0001t0003g0090 a0001c0001t0003g0098 a0001c0001t0003g0104 a0001c0001t0003g0105 a0001c0001t0003g0106 a0001c0001t0021g0085 a0001c0004t0002g0086 a0001c0004t0002g0087	45	292	0.1541	-12	c.-27 others(31): Show c.-278-1776_-278-1765delCTTTCTTTCTTT		PCBP3	ENSG00000183570.17	transcript	ENST00000681687.1	protein_coding	1/17					INFO_REALIGN_3_PRIME	chr21	TogoVar
PCBP3_chr21_45638725_45947450	45669799	GTGTGTGT others(5): Show GTGTGTGTATATA	G G	intron_variant intron_variant	MODIFIER	HG02735.hp2 HG03041.hp1 HG02735.hp2 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0023 a0001c0001t0003 a0001c0001t0023	a0001c0001t0003g0007 a0001c0001t0023g0111 a0001c0001t0003g0007 a0001c0001t0023g0111	2	292	0.0069	-12	c.-20 others(29): Show c.-200+849_-200+860delGTGTGTATATAT		PCBP3	ENSG00000183570.17	transcript	ENST00000681687.1	protein_coding	2/17					INFO_REALIGN_3_PRIME	chr21	TogoVar
PCBP3_chr21_45638725_45947450	45669801	GTGTGTAT others(5): Show GTGTGTATATATA	G G	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0052 a0001c0001t0002g0052	1	292	0.0034	-12	c.-20 others(29): Show c.-200+851_-200+862delGTGTATATATAT		PCBP3	ENSG00000183570.17	transcript	ENST00000681687.1	protein_coding	2/17					INFO_REALIGN_3_PRIME	chr21	TogoVar
PCBP3_chr21_45638725_45947450	45669805	GTATATAT others(5): Show GTATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG02559.hp1 NA18983.hp2 HG02559.hp1 NA18983.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0242 a0001c0001t0002g0284 a0001c0001t0002g0242 a0001c0001t0002g0284	2	292	0.0069	-12	c.-20 others(29): Show c.-200+883_-200+894delATATATATATAT		PCBP3	ENSG00000183570.17	transcript	ENST00000681687.1	protein_coding	2/17					INFO_REALIGN_3_PRIME	chr21	TogoVar
PCBP3_chr21_45638725_45947450	45763532	GGCAAAGT others(5): Show GGCAAAGTTCACT	G G	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02886.hp2 HG02809.hp1 HG02886.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0090 a0001c0001t0003g0098 a0001c0001t0003g0090 a0001c0001t0003g0098	2	292	0.0069	-12	c.-12 others(31): Show c.-126+8089_-126+8100delCACTGCAAAGTT		PCBP3	ENSG00000183570.17	transcript	ENST00000681687.1	protein_coding	4/17					INFO_REALIGN_3_PRIME	chr21	TogoVar
PCBP3_chr21_45638725_45947450	45784385	TCTACCTC others(5): Show TCTACCTCTACCG	T T	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02965.hp2 HG04115.hp2 others(5): Show HG02055.hp2 HG02965.hp2 HG04115.hp2 NA18941.hp2 NA18946.hp2 NA18983.hp2 NA19091.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0022 a0001c0001t0002 a0001c0001t0003 a0001c0001t0022	a0001c0001t0002g0227 a0001c0001t0002g0257 a0001c0001t0002g0270 others(5): Show a0001c0001t0002g0227 a0001c0001t0002g0257 a0001c0001t0002g0270 a0001c0001t0002g0272 a0001c0001t0002g0283 a0001c0001t0002g0284 a0001c0001t0003g0263 a0001c0001t0022g0216	8	292	0.0274	-12	c.-12 others(33): Show c.-126+28951_-126+28962delTCTACCGCTACC		PCBP3	ENSG00000183570.17	transcript	ENST00000681687.1	protein_coding	4/17					INFO_REALIGN_3_PRIME	chr21	TogoVar
PCCA_chr13_100084093_100535435	100105844	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01993.hp1 HG02965.hp2 HG01099.hp2 HG01993.hp1 HG02965.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0026 a0001c0002t0001g0085 a0001c0002t0001g0086 a0001c0001t0001g0026 a0001c0002t0001g0085 a0001c0002t0001g0086	3	174	0.0172	-12	c.183 others(29): Show c.183+2906_183+2917delAAAAAAAAAAAA		PCCA	ENSG00000175198.17	transcript	ENST00000376285.6	protein_coding	2/23					INFO_REALIGN_3_PRIME	chr13	TogoVar
PCCA_chr13_100084093_100535435	100163985	GCGATCAT others(5): Show GCGATCATATAGT	G G	intron_variant intron_variant	MODIFIER	HG00597.hp1 HG01071.hp1 HG01074.hp2 others(40): Show HG00597.hp1 HG01071.hp1 HG01074.hp2 HG01081.hp1 HG01099.hp1 HG01123.hp2 HG01168.hp1 HG01175.hp2 HG01255.hp2 HG01358.hp2 HG01361.hp2 HG01517.hp2 HG01993.hp2 HG02132.hp2 HG02258.hp1 HG02300.hp1 HG02486.hp2 HG02615.hp2 HG02895.hp2 HG02896.hp1 HG02897.hp2 HG03516.hp2 HG03654.hp1 HG03688.hp2 HG03710.hp1 HG03834.hp2 HG04228.hp1 NA18945.hp1 NA18947.hp2 NA18956.hp1 NA18968.hp2 NA18969.hp1 NA18983.hp1 NA18989.hp2 NA18999.hp1 NA19004.hp1 NA19064.hp1 NA19081.hp2 NA19088.hp2 NA19091.hp1 NA20805.hp2 NA20905.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0003 a0004c0004 a0001c0001 a0002c0003 a0004c0004	a0001c0001t0001 a0001c0001t0002 a0002c0003t0001 others(1): Show a0001c0001t0001 a0001c0001t0002 a0002c0003t0001 a0004c0004t0001	a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0027 others(40): Show a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0027 a0001c0001t0001g0067 a0001c0001t0001g0079 a0001c0001t0001g0105 a0001c0001t0001g0115 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0136 a0001c0001t0001g0141 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0147 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0153 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0002g0066 a0002c0003t0001g0063 a0002c0003t0001g0064 a0004c0004t0001g0126	43	174	0.2471	-12	c.468 others(29): Show c.468+6647_468+6658delGATCATATAGTC		PCCA	ENSG00000175198.17	transcript	ENST00000376285.6	protein_coding	6/23					INFO_REALIGN_3_PRIME	chr13	TogoVar
PCCA_chr13_100084093_100535435	100198468	GTTCATTC others(5): Show GTTCATTCATTCA	G G	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG02145.hp1 HG02258.hp2 others(11): Show HG00621.hp1 HG02145.hp1 HG02258.hp2 HG02723.hp1 HG03017.hp1 HG03453.hp1 HG03486.hp1 HG03490.hp2 HG04199.hp2 NA18959.hp2 NA18984.hp1 NA18999.hp2 NA19030.hp1 NA19030.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0001c0001t0002 a0002c0003t0001 a0001c0001t0001 a0001c0001t0002 a0002c0003t0001	a0001c0001t0001g0069 a0001c0001t0001g0081 a0001c0001t0001g0091 others(11): Show a0001c0001t0001g0069 a0001c0001t0001g0081 a0001c0001t0001g0091 a0001c0001t0001g0096 a0001c0001t0001g0114 a0001c0001t0001g0116 a0001c0001t0001g0123 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0146 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0002g0174 a0002c0003t0001g0059	14	174	0.0805	-12	c.469 others(31): Show c.469-10829_469-10818delCATTCATTCATT		PCCA	ENSG00000175198.17	transcript	ENST00000376285.6	protein_coding	6/23					INFO_REALIGN_3_PRIME	chr13	TogoVar
PCCA_chr13_100084093_100535435	100268828	TTTCATTC others(5): Show TTTCATTCATTCA	T T	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG01361.hp2 HG02258.hp2 others(8): Show HG00621.hp1 HG01361.hp2 HG02258.hp2 HG02723.hp1 HG03017.hp1 HG03453.hp1 HG03486.hp1 HG03490.hp2 HG04199.hp2 NA18999.hp2 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0069 a0001c0001t0001g0081 a0001c0001t0001g0096 others(8): Show a0001c0001t0001g0069 a0001c0001t0001g0081 a0001c0001t0001g0096 a0001c0001t0001g0114 a0001c0001t0001g0123 a0001c0001t0001g0138 a0001c0001t0001g0146 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0157 a0001c0001t0002g0174	11	174	0.0632	-12	c.914 others(25): Show c.914+59_914+70delTCATTCATTCAT		PCCA	ENSG00000175198.17	transcript	ENST00000376285.6	protein_coding	11/23					INFO_REALIGN_3_PRIME	chr13	TogoVar
PCCA_chr13_100084093_100535435	100298629	CCCCTCCC others(5): Show CCCCTCCCTCCCT	C C	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG01993.hp1 HG02148.hp1 others(8): Show HG01255.hp1 HG01993.hp1 HG02148.hp1 HG02486.hp2 HG02895.hp2 HG02897.hp2 HG03453.hp2 HG03834.hp1 NA18979.hp2 NA20805.hp1 NA20905.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0002c0003t0001 a0001c0001t0001 a0002c0003t0001	a0001c0001t0001g0006 a0001c0001t0001g0011 a0001c0001t0001g0023 others(8): Show a0001c0001t0001g0006 a0001c0001t0001g0011 a0001c0001t0001g0023 a0001c0001t0001g0026 a0001c0001t0001g0037 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0067 a0001c0001t0001g0139 a0002c0003t0001g0063 a0002c0003t0001g0064	11	174	0.0632	-12	c.106 others(31): Show c.1066-2796_1066-2785delCTCCCTCCCTCC		PCCA	ENSG00000175198.17	transcript	ENST00000376285.6	protein_coding	12/23					INFO_REALIGN_3_PRIME	chr13	TogoVar
PCCA_chr13_100084093_100535435	100298664	CTCCCTCC others(5): Show CTCCCTCCCTCCT	C C	intron_variant intron_variant	MODIFIER	HG01928.hp2 HG03942.hp2 HG01928.hp2 HG03942.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0012 a0001c0001t0001g0039 a0001c0001t0001g0012 a0001c0001t0001g0039	2	174	0.0115	-12	c.106 others(31): Show c.1066-2792_1066-2781delCTCCCTCCTTCC		PCCA	ENSG00000175198.17	transcript	ENST00000376285.6	protein_coding	12/23					INFO_REALIGN_3_PRIME	chr13	TogoVar
PCCA_chr13_100084093_100535435	100298668	CTCCCTCC others(5): Show CTCCCTCCTTCCT	C C	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02486.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0076 a0001c0001t0002g0076	1	174	0.0058	-12	c.106 others(31): Show c.1066-2788_1066-2777delCTCCTTCCTTCC		PCCA	ENSG00000175198.17	transcript	ENST00000376285.6	protein_coding	12/23					INFO_REALIGN_3_PRIME	chr13	TogoVar
PCCA_chr13_100084093_100535435	100298672	CTCCTTCC others(5): Show CTCCTTCCTTCCT	C C	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02897.hp1 HG03139.hp1 others(2): Show HG02896.hp2 HG02897.hp1 HG03139.hp1 HG03540.hp1 NA19030.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0002c0003t0001 a0001c0001t0001 a0002c0003t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0002c0003t0001g0050 others(2): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0002c0003t0001g0050 a0002c0003t0001g0059 a0002c0003t0001g0118	5	174	0.0287	-12	c.106 others(31): Show c.1066-2728_1066-2717delTTCCTTCCTTCC		PCCA	ENSG00000175198.17	transcript	ENST00000376285.6	protein_coding	12/23					INFO_REALIGN_3_PRIME	chr13	TogoVar
PCCA_chr13_100084093_100535435	100321591	CTGTGTGT others(5): Show CTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG01361.hp2 HG02258.hp2 others(7): Show HG00621.hp1 HG01361.hp2 HG02258.hp2 HG02723.hp1 HG03453.hp1 HG03486.hp1 HG04199.hp2 HG06807.hp2 NA18999.hp2 NA19030.hp1	a0001 a0008 a0001 a0008	a0001c0001 a0008c0008 a0001c0001 a0008c0008	a0001c0001t0001 a0001c0001t0002 a0008c0008t0001 a0001c0001t0001 a0001c0001t0002 a0008c0008t0001	a0001c0001t0001g0069 a0001c0001t0001g0096 a0001c0001t0001g0123 others(7): Show a0001c0001t0001g0069 a0001c0001t0001g0096 a0001c0001t0001g0123 a0001c0001t0001g0138 a0001c0001t0001g0146 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0157 a0001c0001t0002g0174 a0008c0008t0001g0103	10	174	0.0575	-12	c.143 others(31): Show c.1430-8936_1430-8925delGTGTGTGTGTGT		PCCA	ENSG00000175198.17	transcript	ENST00000376285.6	protein_coding	16/23					INFO_REALIGN_3_PRIME	chr13	TogoVar
PCCA_chr13_100084093_100535435	100328371	TATAATAA others(5): Show TATAATAATAATA	T T	intron_variant intron_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0008 a0008	a0008c0008 a0008c0008	a0008c0008t0001 a0008c0008t0001	a0008c0008t0001g0103 a0008c0008t0001g0103	1	174	0.0058	-12	c.143 others(31): Show c.1430-2166_1430-2155delAATAATAATAAT		PCCA	ENSG00000175198.17	transcript	ENST00000376285.6	protein_coding	16/23					INFO_REALIGN_3_PRIME	chr13	TogoVar
PCCA_chr13_100084093_100535435	100348727	CCTTTCTT others(5): Show CCTTTCTTTCTTT	C C	intron_variant intron_variant	MODIFIER	HG01346.hp2 HG02486.hp1 HG03041.hp1 others(1): Show HG01346.hp2 HG02486.hp1 HG03041.hp1 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0071 a0001c0001t0001g0154 a0001c0001t0002g0004 others(1): Show a0001c0001t0001g0071 a0001c0001t0001g0154 a0001c0001t0002g0004 a0001c0001t0002g0076	4	174	0.0230	-12	c.164 others(31): Show c.1643+8520_1643+8531delTCTTTCTTTCTT		PCCA	ENSG00000175198.17	transcript	ENST00000376285.6	protein_coding	18/23					INFO_REALIGN_3_PRIME	chr13	TogoVar
PCCA_chr13_100084093_100535435	100348783	TCTTTCTT others(5): Show TCTTTCTTCCTTC	T T	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG02486.hp2 HG02886.hp1 others(2): Show HG00621.hp2 HG02486.hp2 HG02886.hp1 HG03486.hp1 NA18999.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0067 a0001c0001t0001g0069 a0001c0001t0001g0090 others(2): Show a0001c0001t0001g0067 a0001c0001t0001g0069 a0001c0001t0001g0090 a0001c0001t0001g0142 a0001c0001t0001g0146	5	174	0.0287	-12	c.164 others(31): Show c.1643+8528_1643+8539delTCTTCCTTCCTT		PCCA	ENSG00000175198.17	transcript	ENST00000376285.6	protein_coding	18/23					INFO_REALIGN_3_PRIME	chr13	TogoVar
PCCA_chr13_100084093_100535435	100348787	TCTTCCTT others(5): Show TCTTCCTTCCTTC	T T	intron_variant intron_variant	MODIFIER	HG01074.hp2 HG01358.hp2 HG01884.hp1 others(6): Show HG01074.hp2 HG01358.hp2 HG01884.hp1 HG01993.hp2 HG03195.hp1 HG03654.hp1 HG03688.hp2 NA19081.hp2 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0001 a0001c0001t0003	a0001c0001t0001g0057 a0001c0001t0001g0125 a0001c0001t0001g0132 others(6): Show a0001c0001t0001g0057 a0001c0001t0001g0125 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0136 a0001c0001t0001g0150 a0001c0001t0001g0160 a0001c0001t0001g0162 a0001c0001t0003g0062	9	174	0.0517	-12	c.164 others(31): Show c.1643+8548_1643+8559delCCTTCCTTCCTT		PCCA	ENSG00000175198.17	transcript	ENST00000376285.6	protein_coding	18/23					INFO_REALIGN_3_PRIME	chr13	TogoVar
PCCA_chr13_100084093_100535435	100354074	AAATAATA others(5): Show AAATAATAATAAT	A A	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG06807.hp2 HG01255.hp1 HG06807.hp2	a0001 a0008 a0001 a0008	a0001c0001 a0008c0008 a0001c0001 a0008c0008	a0001c0001t0001 a0008c0008t0001 a0001c0001t0001 a0008c0008t0001	a0001c0001t0001g0037 a0008c0008t0001g0103 a0001c0001t0001g0037 a0008c0008t0001g0103	2	174	0.0115	-12	c.164 others(33): Show c.1643+13851_1643+13862delTAATAATAATAA		PCCA	ENSG00000175198.17	transcript	ENST00000376285.6	protein_coding	18/23					INFO_REALIGN_3_PRIME	chr13	TogoVar
PCCA_chr13_100084093_100535435	100440156	TTATATAT others(5): Show TTATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG01255.hp1 HG02148.hp2 others(1): Show HG00099.hp2 HG01255.hp1 HG02148.hp2 NA18979.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0011 a0001c0001t0001g0037 a0001c0001t0001g0098 others(1): Show a0001c0001t0001g0011 a0001c0001t0001g0037 a0001c0001t0001g0098 a0001c0001t0001g0109	4	174	0.0230	-12	c.184 others(31): Show c.1846-9053_1846-9042delTATATATATATA		PCCA	ENSG00000175198.17	transcript	ENST00000376285.6	protein_coding	20/23					INFO_REALIGN_3_PRIME	chr13	TogoVar
PCCA_chr13_100084093_100535435	100458294	TACACACA others(5): Show TACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02572.hp2 HG03195.hp1 others(1): Show HG01884.hp2 HG02572.hp2 HG03195.hp1 HG04184.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 a0001c0001t0001 a0001c0001t0003 a0001c0002t0001	a0001c0001t0001g0058 a0001c0001t0001g0135 a0001c0001t0003g0062 others(1): Show a0001c0001t0001g0058 a0001c0001t0001g0135 a0001c0001t0003g0062 a0001c0002t0001g0082	4	174	0.0230	-12	c.189 others(31): Show c.1899+9029_1899+9040delCACACACACACA		PCCA	ENSG00000175198.17	transcript	ENST00000376285.6	protein_coding	21/23					INFO_REALIGN_3_PRIME	chr13	TogoVar
PCCA_chr13_100084093_100535435	100458428	CACACACA others(5): Show CACACACACACAT	C C	intron_variant intron_variant	MODIFIER	HG03942.hp1 NA18968.hp1 HG03942.hp1 NA18968.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0070 a0001c0001t0001g0140 a0001c0001t0001g0070 a0001c0001t0001g0140	2	174	0.0115	-12	c.189 others(31): Show c.1899+9135_1899+9146delTACACACACACA		PCCA	ENSG00000175198.17	transcript	ENST00000376285.6	protein_coding	21/23					INFO_REALIGN_3_PRIME	chr13	TogoVar
PCCA_chr13_100084093_100535435	100458440	TACACACA others(5): Show TACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00735.hp2 HG00738.hp2 others(31): Show HG00639.hp1 HG00735.hp2 HG00738.hp2 HG01081.hp2 HG01123.hp1 HG01169.hp1 HG01255.hp1 HG01346.hp2 HG01358.hp1 HG01928.hp1 HG01928.hp2 HG01993.hp1 HG02132.hp1 HG02132.hp2 HG02148.hp1 HG02258.hp2 HG02300.hp2 HG02559.hp2 HG02723.hp1 HG03453.hp1 HG04204.hp1 HG04204.hp2 NA18947.hp1 NA18959.hp1 NA18969.hp2 NA18979.hp2 NA18984.hp2 NA18989.hp1 NA19004.hp1 NA19088.hp1 NA19091.hp1 NA19240.hp1 NA20905.hp1 homoSapiens_chm13v2.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0001c0002 a0001c0010 others(1): Show a0001c0001 a0001c0002 a0001c0010 a0004c0004	a0001c0001t0001 a0001c0002t0001 a0001c0010t0001 others(1): Show a0001c0001t0001 a0001c0002t0001 a0001c0010t0001 a0004c0004t0001	a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 others(31): Show a0001c0001t0001g0011 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0026 a0001c0001t0001g0031 a0001c0001t0001g0037 a0001c0001t0001g0040 a0001c0001t0001g0046 a0001c0001t0001g0049 a0001c0001t0001g0054 a0001c0001t0001g0056 a0001c0001t0001g0092 a0001c0001t0001g0112 a0001c0001t0001g0123 a0001c0001t0001g0125 a0001c0001t0001g0141 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0154 a0001c0001t0001g0165 a0001c0002t0001g0073 a0001c0002t0001g0094 a0001c0002t0001g0095 a0001c0002t0001g0104 a0001c0002t0001g0106 a0001c0002t0001g0107 a0001c0002t0001g0108 a0001c0010t0001g0060 a0004c0004t0001g0126	34	174	0.1954	-12	c.189 others(31): Show c.1899+9170_1899+9181delACACACACACAC		PCCA	ENSG00000175198.17	transcript	ENST00000376285.6	protein_coding	21/23					INFO_REALIGN_3_PRIME	chr13	TogoVar
PCCA_chr13_100084093_100535435	100517046	CGTGTGTG others(5): Show CGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG02559.hp1 HG02896.hp2 others(2): Show HG02486.hp1 HG02559.hp1 HG02896.hp2 HG02897.hp1 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0002g0004 others(2): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0002g0004 a0001c0001t0002g0076 a0001c0001t0002g0171	5	174	0.0287	-12	c.204 others(31): Show c.2040+1512_2040+1523delGTGTGTGTGTGT		PCCA	ENSG00000175198.17	transcript	ENST00000376285.6	protein_coding	22/23					INFO_REALIGN_3_PRIME	chr13	TogoVar
PCCA_chr13_100084093_100535435	100524983	GGATAGAT others(5): Show GGATAGATAGATA	G G	intron_variant intron_variant	MODIFIER	HG01071.hp2 HG01074.hp2 HG01346.hp1 others(8): Show HG01071.hp2 HG01074.hp2 HG01346.hp1 HG01358.hp2 HG01517.hp1 HG03654.hp1 HG03710.hp2 HG03834.hp2 HG04204.hp1 HG04228.hp1 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0033 a0001c0001t0001g0038 a0001c0001t0001g0054 others(8): Show a0001c0001t0001g0033 a0001c0001t0001g0038 a0001c0001t0001g0054 a0001c0001t0001g0125 a0001c0001t0001g0131 a0001c0001t0001g0133 a0001c0001t0001g0136 a0001c0001t0001g0151 a0001c0001t0001g0162 a0001c0002t0001g0078 a0001c0002t0001g0087	11	174	0.0632	-12	c.204 others(31): Show c.2041-2657_2041-2646delTAGATAGATAGA		PCCA	ENSG00000175198.17	transcript	ENST00000376285.6	protein_coding	22/23					INFO_REALIGN_3_PRIME	chr13	TogoVar
PCCB_chr3_136245340_136335169	136299438	ATATATGC others(5): Show ATATATGCATATG	A A	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0013 a0001c0001t0001g0013	1	300	0.0033	-12	c.884 others(29): Show c.884+1370_884+1381delATGCATATGTAT		PCCB	ENSG00000114054.14	transcript	ENST00000251654.9	protein_coding	8/14					INFO_REALIGN_3_PRIME	chr3	TogoVar
PCDH10_chr4_133144294_133199700	133199289	AAATAATA others(5): Show AAATAATAATAAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00438.hp2 HG00438.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0101 a0001c0001t0004g0101	1	382	0.0026	-12	c.91 others(23): Show c.9130_*9141delAATAATAATAAT		PCDH10	ENSG00000138650.9	transcript	ENST00000264360.7	protein_coding					4590		chr4	TogoVar
PCDH11X_chrX_91774375_92628230	91775274	CGTGTGTG others(5): Show CGTGTGTGTGTGT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01109.hp1 HG02486.hp1 HG02572.hp1 others(7): Show HG01109.hp1 HG02486.hp1 HG02572.hp1 HG02895.hp1 HG02965.hp1 HG02976.hp2 HG03195.hp2 HG03225.hp1 HG03453.hp2 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0006 a0001c0001t0023 a0001c0002t0001 others(5): Show a0001c0001t0006 a0001c0001t0023 a0001c0002t0001 a0001c0002t0002 a0001c0002t0005 a0001c0002t0006 a0001c0002t0008 a0001c0002t0021	a0001c0001t0006g0003 a0001c0001t0023g0013 a0001c0002t0001g0005 others(7): Show a0001c0001t0006g0003 a0001c0001t0023g0013 a0001c0002t0001g0005 a0001c0002t0002g0008 a0001c0002t0002g0011 a0001c0002t0002g0012 a0001c0002t0005g0009 a0001c0002t0006g0007 a0001c0002t0008g0004 a0001c0002t0021g0006	10	154	0.0649	-12	c.-47 others(23): Show c.-4788_-4777delGTGTGTGTGTGT		PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding					4100		chrX	TogoVar
PCDH11X_chrX_91774375_92628230	91829432	ACACACAC others(5): Show ACACACACACACC	A A	intron_variant intron_variant	MODIFIER	HG06807.hp2 NA19068.hp1 NA21309.hp1 HG06807.hp2 NA19068.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0009 a0001c0001 a0001c0009	a0001c0001t0001 a0001c0009t0031 a0001c0001t0001 a0001c0009t0031	a0001c0001t0001g0015 a0001c0001t0001g0039 a0001c0009t0031g0044 a0001c0001t0001g0015 a0001c0001t0001g0039 a0001c0009t0031g0044	3	154	0.0195	-12	c.-44 others(29): Show c.-44-6024_-44-6013delCACACACCCACA		PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	4/10					INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	91905098	TTTATTAT others(5): Show TTTATTATTATTA	T T	intron_variant intron_variant	MODIFIER	HG02056.hp1 HG02056.hp1	a0004 a0004	a0004c0007 a0004c0007	a0004c0007t0001 a0004c0007t0001	a0004c0007t0001g0020 a0004c0007t0001g0020	1	154	0.0065	-12	c.303 others(33): Show c.3033+25849_3033+25860delATTATTATTATT		PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	6/10					INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	91926076	GCACACAC others(5): Show GCACACACACACA	G G	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG02717.hp1 HG01081.hp1 HG02717.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0022 a0001c0001t0020 a0001c0001t0022	a0001c0001t0020g0149 a0001c0001t0022g0023 a0001c0001t0020g0149 a0001c0001t0022g0023	2	154	0.0130	-12	c.303 others(33): Show c.3033+46830_3033+46841delCACACACACACA		PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	6/10					INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92004768	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG06807.hp1 HG06807.hp2 HG02976.hp2 HG06807.hp1 HG06807.hp2	a0001 a0001	a0001c0002 a0001c0009 a0001c0002 a0001c0009	a0001c0002t0001 a0001c0002t0021 a0001c0009t0031 a0001c0002t0001 a0001c0002t0021 a0001c0009t0031	a0001c0002t0001g0005 a0001c0002t0021g0006 a0001c0009t0031g0044 a0001c0002t0001g0005 a0001c0002t0021g0006 a0001c0009t0031g0044	3	154	0.0195	-12	c.303 others(35): Show c.3033+125509_3033+125520delTTTTTTTTTTTT		PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	6/10					INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92064517	AATAAATA others(5): Show AATAAATAAATAG	A A	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03139.hp1 HG03195.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0005 a0001c0002t0002 a0001c0001t0002 a0001c0001t0005 a0001c0002t0002	a0001c0001t0002g0076 a0001c0001t0005g0056 a0001c0002t0002g0008 a0001c0001t0002g0076 a0001c0001t0005g0056 a0001c0002t0002g0008	3	154	0.0195	-12	c.303 others(35): Show c.3034-136857_3034-136846delATAAATAAATAG		PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	6/10						chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92077622	GAGGAAGG others(5): Show GAGGAAGGAAGGA	G G	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02486.hp1 HG02717.hp1 others(6): Show HG01243.hp1 HG02486.hp1 HG02717.hp1 HG02818.hp1 HG02818.hp2 HG03453.hp2 HG03471.hp1 HG06807.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0009 a0001c0001 a0001c0002 a0001c0009	a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 others(6): Show a0001c0001t0002 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0011 a0001c0001t0022 a0001c0002t0002 a0001c0002t0005 a0001c0009t0031	a0001c0001t0002g0057 a0001c0001t0005g0021 a0001c0001t0006g0046 others(6): Show a0001c0001t0002g0057 a0001c0001t0005g0021 a0001c0001t0006g0046 a0001c0001t0007g0017 a0001c0001t0011g0010 a0001c0001t0022g0023 a0001c0002t0002g0012 a0001c0002t0005g0009 a0001c0009t0031g0044	9	154	0.0584	-12	c.303 others(35): Show c.3034-123716_3034-123705delAGGAAGGAAGGA		PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	6/10					INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92094133	ATGTGTGT others(5): Show ATGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG02015.hp1 HG02071.hp1 others(16): Show HG01261.hp1 HG02015.hp1 HG02071.hp1 HG02074.hp1 HG02083.hp1 HG02129.hp1 HG02132.hp1 HG02615.hp1 NA18949.hp1 NA18949.hp2 NA18962.hp1 NA18967.hp1 NA18968.hp1 NA18982.hp1 NA18990.hp1 NA18994.hp1 NA19066.hp1 NA19083.hp1 NA19088.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0010 a0002c0004 others(1): Show a0001c0001 a0001c0010 a0002c0004 a0003c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0013 a0001c0001t0015 a0001c0001t0016 a0001c0010t0001 a0002c0004t0009 a0003c0005t0001	a0001c0001t0001g0026 a0001c0001t0001g0055 a0001c0001t0001g0066 others(16): Show a0001c0001t0001g0026 a0001c0001t0001g0055 a0001c0001t0001g0066 a0001c0001t0001g0068 a0001c0001t0001g0121 a0001c0001t0002g0001 a0001c0001t0002g0110 a0001c0001t0003g0027 a0001c0001t0003g0036 a0001c0001t0003g0092 a0001c0001t0003g0132 a0001c0001t0007g0037 a0001c0001t0007g0122 a0001c0001t0013g0097 a0001c0001t0015g0084 a0001c0001t0016g0118 a0001c0010t0001g0105 a0002c0004t0009g0040 a0003c0005t0001g0025	19	154	0.1234	-12	c.303 others(35): Show c.3034-107210_3034-107199delGTGTGTGTGTGT		PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	6/10					INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92147806	CCTTCCTT others(5): Show CCTTCCTTTCTTT	C C	intron_variant intron_variant	MODIFIER	HG02486.hp1 HG03041.hp1 HG02486.hp1 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0006 a0001c0002t0005 a0001c0001t0006 a0001c0002t0005	a0001c0001t0006g0053 a0001c0002t0005g0009 a0001c0001t0006g0053 a0001c0002t0005g0009	2	154	0.0130	-12	c.303 others(33): Show c.3034-53565_3034-53554delCCTTTCTTTCTT		PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	6/10					INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92148057	CCTTTCTT others(5): Show CCTTTCTTTCTTT	C C	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG01943.hp1 HG02738.hp1 others(9): Show HG00280.hp1 HG01943.hp1 HG02738.hp1 HG03239.hp2 HG03490.hp1 HG03540.hp1 NA18612.hp1 NA18943.hp1 NA18949.hp1 NA18949.hp2 NA18960.hp1 NA18986.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0005 a0001c0001 a0003c0005	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(3): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0026 a0003c0005t0001	a0001c0001t0001g0029 a0001c0001t0001g0098 a0001c0001t0001g0099 others(9): Show a0001c0001t0001g0029 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0127 a0001c0001t0002g0002 a0001c0001t0002g0016 a0001c0001t0002g0133 a0001c0001t0002g0141 a0001c0001t0003g0093 a0001c0001t0007g0122 a0001c0001t0026g0138 a0003c0005t0001g0025	12	154	0.0779	-12	c.303 others(33): Show c.3034-53253_3034-53242delCTTTCTTTCTTT		PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	6/10					INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92148173	CTTCTTTC others(5): Show CTTCTTTCTTTCT	C C	intron_variant intron_variant	MODIFIER	HG03492.hp1 HG03492.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0104 a0001c0001t0001g0104	1	154	0.0065	-12	c.303 others(33): Show c.3034-53177_3034-53166delTTCTTTCTTTCT		PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	6/10					INFO_REALIGN_3_PRIME	chrX	TogoVar

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