regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PCDHGA10_chr5_141407987_141517975 | 141438631 | TATATACA others(5): Show |
T | intron_variant | MODIFIER | HG01255.hp1 HG01346.hp2 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0144a0001c0001t0002g0145 | 2 | 306 | 0.0065 | -12 | c.243 others(33): Show |
PCDHGA10 | ENSG00000253846.3 | transcript | ENST00000398610.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA10_chr5_141407987_141517975 | 141455860 | ATTATTTA others(5): Show |
A | intron_variant | MODIFIER | HG01934.hp2 HG02145.hp1 HG02451.hp1 others(2): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0014a0001c0004t0005 | a0001c0001t0001g0075a0001c0001t0014g0069a0001c0004t0005g0195others(2): Show | 5 | 306 | 0.0163 | -12 | c.243 others(33): Show |
PCDHGA10 | ENSG00000253846.3 | transcript | ENST00000398610.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA10_chr5_141407987_141517975 | 141482956 | CCAGCTAC others(5): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00323.hp1 others(149): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0003a0001c0004others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(20): Show | a0001c0001t0001g0005a0001c0001t0001g0008a0001c0001t0001g0009others(149): Show | 152 | 306 | 0.4967 | -12 | c.243 others(33): Show |
PCDHGA10 | ENSG00000253846.3 | transcript | ENST00000398610.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA10_chr5_141407987_141517975 | 141498971 | GGGAAGGA others(5): Show |
G | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp2 HG00438.hp1 others(57): Show |
a0001a0002a0008others(4): Show | a0001c0001a0001c0003a0001c0015others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(12): Show | a0001c0001t0001g0057a0001c0001t0001g0092a0001c0001t0001g0152others(57): Show | 60 | 306 | 0.1961 | -12 | c.249 others(31): Show |
PCDHGA10 | ENSG00000253846.3 | transcript | ENST00000398610.3 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA11_chr5_141416051_141517975 | 141433358 | CCTATCTA others(5): Show |
C | intron_variant | MODIFIER | HG01081.hp2 HG01516.hp1 NA18970.hp1 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0002 | a0001c0001t0001g0293a0002c0002t0002g0010a0002c0002t0002g0011 | 3 | 310 | 0.0097 | -12 | c.243 others(31): Show |
PCDHGA11 | ENSG00000253873.6 | transcript | ENST00000398587.7 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA11_chr5_141416051_141517975 | 141438583 | CATACATA others(5): Show |
C | intron_variant | MODIFIER | HG00544.hp1 HG01243.hp1 HG01346.hp1 others(5): Show |
a0001a0003 | a0001c0001a0001c0006a0003c0005 | a0001c0001t0001a0001c0006t0001a0003c0005t0001 | a0001c0001t0001g0090a0001c0001t0001g0104a0001c0001t0001g0140others(5): Show | 8 | 310 | 0.0258 | -12 | c.243 others(33): Show |
PCDHGA11 | ENSG00000253873.6 | transcript | ENST00000398587.7 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA11_chr5_141416051_141517975 | 141438625 | TATATATA others(5): Show |
T | intron_variant | MODIFIER | HG01928.hp1 NA19002.hp2 NA19082.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0014 | a0001c0001t0001g0234a0001c0001t0001g0237a0001c0001t0014g0231 | 3 | 310 | 0.0097 | -12 | c.243 others(33): Show |
PCDHGA11 | ENSG00000253873.6 | transcript | ENST00000398587.7 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA11_chr5_141416051_141517975 | 141438627 | TATATATA others(5): Show |
T | intron_variant | MODIFIER | HG01891.hp1 HG02723.hp2 NA18522.hp2 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0001 | a0001c0001t0001g0192a0001c0001t0001g0251a0002c0002t0001g0041 | 3 | 310 | 0.0097 | -12 | c.243 others(33): Show |
PCDHGA11 | ENSG00000253873.6 | transcript | ENST00000398587.7 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA11_chr5_141416051_141517975 | 141438629 | TATATATA others(5): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG01175.hp2 HG01433.hp2 others(30): Show |
a0001a0005a0010 | a0001c0001a0005c0010a0010c0013 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(7): Show | a0001c0001t0001g0102a0001c0001t0001g0103a0001c0001t0001g0116others(30): Show | 33 | 310 | 0.1065 | -12 | c.243 others(33): Show |
PCDHGA11 | ENSG00000253873.6 | transcript | ENST00000398587.7 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA11_chr5_141416051_141517975 | 141438631 | TATATACA others(5): Show |
T | intron_variant | MODIFIER | HG01255.hp2 HG01346.hp2 |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0261a0001c0001t0003g0264 | 2 | 310 | 0.0065 | -12 | c.243 others(33): Show |
PCDHGA11 | ENSG00000253873.6 | transcript | ENST00000398587.7 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA11_chr5_141416051_141517975 | 141455860 | ATTATTTA others(5): Show |
A | intron_variant | MODIFIER | HG01934.hp2 HG02145.hp1 HG02451.hp1 others(2): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0011a0001c0004t0001a0001c0004t0020 | a0001c0001t0011g0107a0001c0001t0011g0108a0001c0001t0011g0109others(2): Show | 5 | 310 | 0.0161 | -12 | c.243 others(33): Show |
PCDHGA11 | ENSG00000253873.6 | transcript | ENST00000398587.7 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA11_chr5_141416051_141517975 | 141482956 | CCAGCTAC others(5): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp2 HG00323.hp2 others(153): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0003a0001c0004others(11): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(26): Show | a0001c0001t0001g0090a0001c0001t0001g0091a0001c0001t0001g0100others(153): Show | 156 | 310 | 0.5032 | -12 | c.243 others(33): Show |
PCDHGA11 | ENSG00000253873.6 | transcript | ENST00000398587.7 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA11_chr5_141416051_141517975 | 141498971 | GGGAAGGA others(5): Show |
G | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00438.hp1 others(60): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0016a0002c0002others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0100a0001c0001t0001g0102a0001c0001t0001g0103others(60): Show | 63 | 310 | 0.2032 | -12 | c.249 others(31): Show |
PCDHGA11 | ENSG00000253873.6 | transcript | ENST00000398587.7 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA12_chr5_141425507_141517975 | 141433358 | CCTATCTA others(5): Show |
C | intron_variant | MODIFIER | HG01081.hp2 HG01516.hp2 NA18970.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0003a0001c0002t0001 | a0001c0001t0003g0313a0001c0001t0003g0314a0001c0002t0001g0315 | 3 | 318 | 0.0094 | -12 | c.242 others(29): Show |
PCDHGA12 | ENSG00000253159.3 | transcript | ENST00000252085.4 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA12_chr5_141425507_141517975 | 141438571 | TATACATA others(5): Show |
T | intron_variant | MODIFIER | NA18988.hp1 | a0001 | a0001c0002 | a0001c0002t0004 | a0001c0002t0004g0019 | 1 | 318 | 0.0031 | -12 | c.242 others(31): Show |
PCDHGA12 | ENSG00000253159.3 | transcript | ENST00000252085.4 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA12_chr5_141425507_141517975 | 141438583 | CATACATA others(5): Show |
C | intron_variant | MODIFIER | HG00544.hp1 HG01243.hp1 HG01346.hp1 others(5): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0003a0003c0006others(1): Show | a0001c0001t0001a0002c0003t0001a0003c0006t0001others(1): Show | a0001c0001t0001g0148a0001c0001t0001g0245a0001c0001t0001g0311others(5): Show | 8 | 318 | 0.0252 | -12 | c.242 others(31): Show |
PCDHGA12 | ENSG00000253159.3 | transcript | ENST00000252085.4 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA12_chr5_141425507_141517975 | 141438625 | TATATATA others(5): Show |
T | intron_variant | MODIFIER | HG01928.hp2 NA19002.hp2 NA19082.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0009 | a0001c0001t0001g0055a0001c0001t0001g0101a0001c0001t0009g0102 | 3 | 318 | 0.0094 | -12 | c.242 others(31): Show |
PCDHGA12 | ENSG00000253159.3 | transcript | ENST00000252085.4 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA12_chr5_141425507_141517975 | 141438627 | TATATATA others(5): Show |
T | intron_variant | MODIFIER | HG01891.hp2 HG02723.hp1 NA18522.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0103a0001c0001t0001g0104a0001c0001t0001g0273 | 3 | 318 | 0.0094 | -12 | c.242 others(31): Show |
PCDHGA12 | ENSG00000253159.3 | transcript | ENST00000252085.4 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA12_chr5_141425507_141517975 | 141438629 | TATATATA others(5): Show |
T | intron_variant | MODIFIER | HG00099.hp2 HG01175.hp2 HG01433.hp2 others(30): Show |
a0001 | a0001c0001a0001c0002a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(6): Show | a0001c0001t0001g0032a0001c0001t0001g0033a0001c0001t0001g0049others(30): Show | 33 | 318 | 0.1038 | -12 | c.242 others(31): Show |
PCDHGA12 | ENSG00000253159.3 | transcript | ENST00000252085.4 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA12_chr5_141425507_141517975 | 141438631 | TATATACA others(5): Show |
T | intron_variant | MODIFIER | HG01255.hp2 HG01346.hp2 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0028a0001c0001t0002g0139 | 2 | 318 | 0.0063 | -12 | c.242 others(31): Show |
PCDHGA12 | ENSG00000253159.3 | transcript | ENST00000252085.4 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA12_chr5_141425507_141517975 | 141455860 | ATTATTTA others(5): Show |
A | intron_variant | MODIFIER | HG01934.hp2 HG02145.hp1 HG02451.hp2 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0005a0001c0001t0015 | a0001c0001t0001g0066a0001c0001t0005g0018a0001c0001t0005g0184others(2): Show | 5 | 318 | 0.0157 | -12 | c.242 others(33): Show |
PCDHGA12 | ENSG00000253159.3 | transcript | ENST00000252085.4 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA12_chr5_141425507_141517975 | 141482956 | CCAGCTAC others(5): Show |
C | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00323.hp2 others(155): Show |
a0001a0002a0003others(6): Show | a0001c0001a0001c0002a0001c0005others(13): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(24): Show | a0001c0001t0001g0004a0001c0001t0001g0015a0001c0001t0001g0017others(155): Show | 158 | 318 | 0.4969 | -12 | c.242 others(33): Show |
PCDHGA12 | ENSG00000253159.3 | transcript | ENST00000252085.4 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA12_chr5_141425507_141517975 | 141498971 | GGGAAGGA others(5): Show |
G | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00438.hp2 others(60): Show |
a0001a0002a0010others(1): Show | a0001c0001a0001c0002a0002c0003others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(6): Show | a0001c0001t0001g0063a0001c0001t0001g0073a0001c0001t0001g0076others(60): Show | 63 | 318 | 0.1981 | -12 | c.248 others(31): Show |
PCDHGA12 | ENSG00000253159.3 | transcript | ENST00000252085.4 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA1_chr5_141325514_141517975 | 141327236 | TGGTGGGG others(5): Show |
T | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00639.hp2 HG00642.hp2 others(10): Show |
a0001a0004 | a0001c0002a0004c0005 | a0001c0002t0001a0001c0002t0002a0004c0005t0001others(2): Show | a0001c0002t0001g0021a0001c0002t0002g0019a0001c0002t0002g0020others(10): Show | 13 | 268 | 0.0485 | -12 | c.-34 others(23): Show |
PCDHGA1 | ENSG00000204956.6 | transcript | ENST00000517417.3 | protein_coding | 3277 | chr5 | TogoVar | ||||||
PCDHGA1_chr5_141325514_141517975 | 141347137 | CTCTTTCT others(5): Show |
C | intron_variant | MODIFIER | NA19082.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0122 | 1 | 268 | 0.0037 | -12 | c.242 others(33): Show |
PCDHGA1 | ENSG00000204956.6 | transcript | ENST00000517417.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA1_chr5_141325514_141517975 | 141395542 | TTGTGTGT others(5): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00280.hp1 others(79): Show |
a0001a0002a0004others(4): Show | a0001c0001a0001c0002a0001c0007others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(21): Show | a0001c0001t0001g0213a0001c0001t0001g0214a0001c0001t0002g0046others(79): Show | 82 | 268 | 0.3060 | -12 | c.242 others(33): Show |
PCDHGA1 | ENSG00000204956.6 | transcript | ENST00000517417.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA1_chr5_141325514_141517975 | 141433358 | CCTATCTA others(5): Show |
C | intron_variant | MODIFIER | HG01081.hp2 HG01516.hp2 NA18970.hp1 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0003a0001c0002t0001 | a0001c0001t0003g0094a0001c0001t0003g0098a0001c0002t0001g0226 | 3 | 268 | 0.0112 | -12 | c.242 others(33): Show |
PCDHGA1 | ENSG00000204956.6 | transcript | ENST00000517417.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA1_chr5_141325514_141517975 | 141438583 | CATACATA others(5): Show |
C | intron_variant | MODIFIER | HG00544.hp2 HG01346.hp1 HG02886.hp1 others(3): Show |
a0001a0008 | a0001c0001a0001c0002a0008c0011 | a0001c0001t0001a0001c0002t0001a0008c0011t0001 | a0001c0001t0001g0170a0001c0002t0001g0036a0001c0002t0001g0039others(3): Show | 6 | 268 | 0.0224 | -12 | c.242 others(33): Show |
PCDHGA1 | ENSG00000204956.6 | transcript | ENST00000517417.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA1_chr5_141325514_141517975 | 141438625 | TATATATA others(5): Show |
T | intron_variant | MODIFIER | HG01928.hp1 NA19002.hp1 NA19082.hp2 |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0001a0001c0001t0010a0002c0003t0001 | a0001c0001t0001g0007a0001c0001t0010g0155a0002c0003t0001g0197 | 3 | 268 | 0.0112 | -12 | c.242 others(33): Show |
PCDHGA1 | ENSG00000204956.6 | transcript | ENST00000517417.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA1_chr5_141325514_141517975 | 141438627 | TATATATA others(5): Show |
T | intron_variant | MODIFIER | HG01891.hp1 HG02723.hp2 NA18522.hp1 |
a0001a0006 | a0001c0001a0006c0009 | a0001c0001t0001a0006c0009t0001 | a0001c0001t0001g0006a0001c0001t0001g0095a0006c0009t0001g0093 | 3 | 268 | 0.0112 | -12 | c.242 others(33): Show |
PCDHGA1 | ENSG00000204956.6 | transcript | ENST00000517417.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA1_chr5_141325514_141517975 | 141438629 | TATATATA others(5): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG01175.hp2 HG01433.hp1 others(23): Show |
a0001a0004a0005others(2): Show | a0001c0001a0001c0002a0001c0007others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(9): Show | a0001c0001t0001g0074a0001c0001t0001g0179a0001c0001t0001g0213others(23): Show | 26 | 268 | 0.0970 | -12 | c.242 others(33): Show |
PCDHGA1 | ENSG00000204956.6 | transcript | ENST00000517417.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA1_chr5_141325514_141517975 | 141438631 | TATATACA others(5): Show |
T | intron_variant | MODIFIER | HG01255.hp1 HG01346.hp2 |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0061a0001c0001t0002g0162 | 2 | 268 | 0.0075 | -12 | c.242 others(33): Show |
PCDHGA1 | ENSG00000204956.6 | transcript | ENST00000517417.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA1_chr5_141325514_141517975 | 141455860 | ATTATTTA others(5): Show |
A | intron_variant | MODIFIER | HG01934.hp1 HG02145.hp2 HG02451.hp1 others(2): Show |
a0001a0006 | a0001c0001a0001c0002a0006c0009 | a0001c0001t0004a0001c0002t0014a0006c0009t0001 | a0001c0001t0004g0088a0001c0001t0004g0089a0001c0001t0004g0090others(2): Show | 5 | 268 | 0.0187 | -12 | c.242 others(33): Show |
PCDHGA1 | ENSG00000204956.6 | transcript | ENST00000517417.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA1_chr5_141325514_141517975 | 141482956 | CCAGCTAC others(5): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp2 HG00323.hp1 others(139): Show |
a0001a0002a0003others(8): Show | a0001c0001a0001c0002a0001c0012others(13): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(29): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0008others(139): Show | 142 | 268 | 0.5299 | -12 | c.242 others(33): Show |
PCDHGA1 | ENSG00000204956.6 | transcript | ENST00000517417.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA1_chr5_141325514_141517975 | 141498971 | GGGAAGGA others(5): Show |
G | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(53): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0002a0002c0003others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(12): Show | a0001c0001t0001g0120a0001c0001t0001g0213a0001c0001t0001g0214others(53): Show | 56 | 268 | 0.2090 | -12 | c.248 others(31): Show |
PCDHGA1 | ENSG00000204956.6 | transcript | ENST00000517417.3 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA2_chr5_141333760_141517975 | 141347137 | CTCTTTCT others(5): Show |
C | intron_variant | MODIFIER | NA19082.hp1 | a0002 | a0002c0002 | a0002c0002t0003 | a0002c0002t0003g0199 | 1 | 272 | 0.0037 | -12 | c.242 others(31): Show |
PCDHGA2 | ENSG00000081853.15 | transcript | ENST00000394576.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA2_chr5_141333760_141517975 | 141395542 | TTGTGTGT others(5): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00280.hp1 others(84): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0004a0001c0015others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(20): Show | a0001c0001t0001g0038a0001c0001t0001g0043a0001c0001t0001g0044others(84): Show | 87 | 272 | 0.3199 | -12 | c.242 others(33): Show |
PCDHGA2 | ENSG00000081853.15 | transcript | ENST00000394576.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA2_chr5_141333760_141517975 | 141433358 | CCTATCTA others(5): Show |
C | intron_variant | MODIFIER | HG01081.hp2 HG01516.hp1 NA18970.hp2 |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0003a0003c0003t0001 | a0001c0001t0003g0087a0001c0001t0003g0103a0003c0003t0001g0154 | 3 | 272 | 0.0110 | -12 | c.242 others(33): Show |
PCDHGA2 | ENSG00000081853.15 | transcript | ENST00000394576.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA2_chr5_141333760_141517975 | 141438583 | CATACATA others(5): Show |
C | intron_variant | MODIFIER | HG00544.hp1 HG01346.hp2 HG02886.hp2 others(4): Show |
a0001a0003a0009 | a0001c0001a0001c0011a0003c0003others(1): Show | a0001c0001t0001a0001c0011t0001a0003c0003t0001others(1): Show | a0001c0001t0001g0043a0001c0001t0001g0133a0001c0001t0001g0136others(4): Show | 7 | 272 | 0.0257 | -12 | c.242 others(33): Show |
PCDHGA2 | ENSG00000081853.15 | transcript | ENST00000394576.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA2_chr5_141333760_141517975 | 141438625 | TATATATA others(5): Show |
T | intron_variant | MODIFIER | HG01928.hp2 NA19002.hp1 NA19082.hp2 |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0002c0002t0009 | a0001c0001t0001g0069a0001c0001t0001g0086a0002c0002t0009g0242 | 3 | 272 | 0.0110 | -12 | c.242 others(33): Show |
PCDHGA2 | ENSG00000081853.15 | transcript | ENST00000394576.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA2_chr5_141333760_141517975 | 141438627 | TATATATA others(5): Show |
T | intron_variant | MODIFIER | HG01891.hp2 HG02723.hp2 NA18522.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0053a0001c0001t0001g0068a0001c0001t0001g0090 | 3 | 272 | 0.0110 | -12 | c.242 others(33): Show |
PCDHGA2 | ENSG00000081853.15 | transcript | ENST00000394576.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA2_chr5_141333760_141517975 | 141438629 | TATATATA others(5): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG01175.hp1 HG01433.hp1 others(24): Show |
a0001a0003a0004others(1): Show | a0001c0001a0001c0004a0003c0003others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(7): Show | a0001c0001t0001g0018a0001c0001t0001g0030a0001c0001t0001g0038others(24): Show | 27 | 272 | 0.0993 | -12 | c.242 others(33): Show |
PCDHGA2 | ENSG00000081853.15 | transcript | ENST00000394576.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA2_chr5_141333760_141517975 | 141438631 | TATATACA others(5): Show |
T | intron_variant | MODIFIER | HG01255.hp1 HG01346.hp1 |
a0001a0002 | a0001c0004a0002c0002 | a0001c0004t0002a0002c0002t0002 | a0001c0004t0002g0026a0002c0002t0002g0253 | 2 | 272 | 0.0074 | -12 | c.242 others(33): Show |
PCDHGA2 | ENSG00000081853.15 | transcript | ENST00000394576.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA2_chr5_141333760_141517975 | 141455860 | ATTATTTA others(5): Show |
A | intron_variant | MODIFIER | HG01934.hp2 HG02145.hp1 HG02451.hp1 others(2): Show |
a0001a0003 | a0001c0001a0001c0013a0003c0003 | a0001c0001t0005a0001c0013t0001a0003c0003t0013 | a0001c0001t0005g0046a0001c0001t0005g0047a0001c0001t0005g0048others(2): Show | 5 | 272 | 0.0184 | -12 | c.242 others(33): Show |
PCDHGA2 | ENSG00000081853.15 | transcript | ENST00000394576.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA2_chr5_141333760_141517975 | 141482956 | CCAGCTAC others(5): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp2 HG00323.hp1 others(142): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0004a0001c0006others(13): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(27): Show | a0001c0001t0001g0001a0001c0001t0001g0016a0001c0001t0001g0018others(142): Show | 145 | 272 | 0.5331 | -12 | c.242 others(33): Show |
PCDHGA2 | ENSG00000081853.15 | transcript | ENST00000394576.3 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA2_chr5_141333760_141517975 | 141498971 | GGGAAGGA others(5): Show |
G | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(55): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0004a0001c0021others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(14): Show | a0001c0001t0001g0095a0001c0001t0001g0141a0001c0001t0001g0175others(55): Show | 58 | 272 | 0.2132 | -12 | c.248 others(31): Show |
PCDHGA2 | ENSG00000081853.15 | transcript | ENST00000394576.3 | protein_coding | 2/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA3_chr5_141338829_141517975 | 141395542 | TTGTGTGT others(5): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00280.hp1 others(83): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0005a0001c0015others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(13): Show | a0001c0001t0001g0022a0001c0001t0001g0025a0001c0001t0001g0209others(83): Show | 86 | 270 | 0.3185 | -12 | c.242 others(33): Show |
PCDHGA3 | ENSG00000254245.3 | transcript | ENST00000253812.8 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA3_chr5_141338829_141517975 | 141433358 | CCTATCTA others(5): Show |
C | intron_variant | MODIFIER | HG01081.hp2 HG01516.hp2 NA18970.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003 | a0001c0001t0001g0252a0001c0001t0003g0179a0001c0001t0003g0267 | 3 | 270 | 0.0111 | -12 | c.242 others(33): Show |
PCDHGA3 | ENSG00000254245.3 | transcript | ENST00000253812.8 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA3_chr5_141338829_141517975 | 141438583 | CATACATA others(5): Show |
C | intron_variant | MODIFIER | HG00544.hp1 HG01346.hp2 HG02886.hp2 others(4): Show |
a0001a0003a0005 | a0001c0001a0001c0005a0003c0009others(1): Show | a0001c0001t0001a0001c0005t0001a0003c0009t0001others(1): Show | a0001c0001t0001g0101a0001c0005t0001g0241a0003c0009t0001g0021others(4): Show | 7 | 270 | 0.0259 | -12 | c.242 others(33): Show |
PCDHGA3 | ENSG00000254245.3 | transcript | ENST00000253812.8 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | |||||
PCDHGA3_chr5_141338829_141517975 | 141438625 | TATATATA others(5): Show |
T | intron_variant | MODIFIER | HG01928.hp1 NA19002.hp1 |
a0002 | a0002c0002 | a0002c0002t0001a0002c0002t0010 | a0002c0002t0001g0086a0002c0002t0010g0118 | 2 | 270 | 0.0074 | -12 | c.242 others(33): Show |
PCDHGA3 | ENSG00000254245.3 | transcript | ENST00000253812.8 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr5 | TogoVar |