Joint Open Genome and Omics Platform (JoGo)

Search by Variant

Regionname

ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

Chr

Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

Samplehapid

No_hapid

No_samplehapid

Start

End

Minac

Maxac

Minlen

Maxlen

Sort By

Order by

Show

regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
PIGL_chr17_16212210_16331411	16258127	GAGAGAGA others(5): Show GAGAGAGAGAGAA	G G	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0238 a0001c0001t0001g0238	1	246	0.0041	-12	c.335 others(31): Show c.335+24069_335+24080delAAGAGAGAGAGA	PIGL	ENSG00000108474.17	transcript	ENST00000225609.10	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr17	TogoVar
PIGL_chr17_16212210_16331411	16258492	TTTTATTT others(5): Show TTTTATTTATTTA	T T	intron_variant intron_variant	MODIFIER	HG02698.hp2 HG02698.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0064 a0001c0001t0002g0064	1	246	0.0041	-12	c.335 others(31): Show c.335+24438_335+24449delATTTATTTATTT	PIGL	ENSG00000108474.17	transcript	ENST00000225609.10	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr17	TogoVar
PIGL_chr17_16212210_16331411	16264599	CATTATTA others(5): Show CATTATTATTATT	C C	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG02280.hp2 HG02717.hp2 others(3): Show HG01099.hp1 HG02280.hp2 HG02717.hp2 HG03225.hp2 HG03471.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0030 a0001c0001t0001g0107 a0001c0001t0001g0109 others(3): Show a0001c0001t0001g0030 a0001c0001t0001g0107 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0182	6	246	0.0244	-12	c.335 others(31): Show c.335+30569_335+30580delATTATTATTATT	PIGL	ENSG00000108474.17	transcript	ENST00000225609.10	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr17	TogoVar
PIGL_chr17_16212210_16331411	16310286	AGTGTGTG others(5): Show AGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00741.hp1 HG01070.hp2 others(26): Show HG00280.hp1 HG00741.hp1 HG01070.hp2 HG01074.hp2 HG01099.hp2 HG01123.hp2 HG01168.hp1 HG01243.hp1 HG01256.hp2 HG01257.hp2 HG01258.hp1 HG01346.hp1 HG01361.hp1 HG01515.hp2 HG01516.hp2 HG01517.hp2 HG02055.hp2 HG02293.hp2 HG02630.hp1 HG02683.hp2 HG02698.hp2 HG02735.hp2 HG02970.hp2 HG03239.hp2 HG03688.hp1 HG03927.hp1 HG04204.hp2 NA20300.hp2 NA20905.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0002c0002t0002 a0001c0001t0001 a0001c0001t0002 a0002c0002t0002	a0001c0001t0001g0242 a0001c0001t0002g0032 a0001c0001t0002g0034 others(26): Show a0001c0001t0001g0242 a0001c0001t0002g0032 a0001c0001t0002g0034 a0001c0001t0002g0035 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0057 a0001c0001t0002g0058 a0001c0001t0002g0059 a0001c0001t0002g0060 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0070 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0078 a0001c0001t0002g0081 a0001c0001t0002g0083 a0001c0001t0002g0104 a0001c0001t0002g0189 a0002c0002t0002g0052	29	246	0.1179	-12	c.427 others(29): Show c.427-3234_427-3223delGTGTGTGTGTGT	PIGL	ENSG00000108474.17	transcript	ENST00000225609.10	protein_coding	3/6		INFO_REALIGN_3_PRIME	chr17	TogoVar
PIGL_chr17_16212210_16331411	16319223	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0107 a0001c0001t0001g0107	1	246	0.0041	-12	c.660 others(29): Show c.660+1326_660+1337delAAAAAAAAAAAA	PIGL	ENSG00000108474.17	transcript	ENST00000225609.10	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr17	TogoVar
PIGL_chr17_16212210_16331411	16320202	AAAGGAAG others(5): Show AAAGGAAGGAAGG	A A	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00408.hp2 HG00673.hp1 others(28): Show HG00280.hp2 HG00408.hp2 HG00673.hp1 HG01168.hp1 HG01255.hp2 HG01346.hp1 HG01496.hp2 HG01975.hp2 HG01978.hp2 HG02015.hp2 HG02056.hp1 HG02083.hp1 HG02155.hp2 HG02273.hp2 HG02523.hp2 HG02735.hp2 HG03490.hp2 HG03927.hp1 HG04115.hp2 HG04228.hp2 NA18747.hp1 NA18949.hp1 NA18949.hp2 NA18953.hp2 NA18960.hp2 NA18979.hp2 NA18998.hp2 NA18999.hp1 NA19005.hp1 NA19057.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0042 a0001c0001t0001g0102 a0001c0001t0001g0186 others(28): Show a0001c0001t0001g0042 a0001c0001t0001g0102 a0001c0001t0001g0186 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0245 a0001c0001t0002g0026 a0001c0001t0002g0034 a0001c0001t0002g0036 a0001c0001t0002g0039 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0045 a0001c0001t0002g0059 a0001c0001t0002g0068 a0001c0001t0002g0069 a0001c0001t0002g0074 a0001c0001t0002g0078 a0001c0001t0002g0145 a0001c0001t0002g0147 a0001c0001t0002g0149 a0001c0001t0002g0155 a0001c0001t0002g0165 a0001c0001t0002g0166 a0001c0001t0002g0167 a0001c0001t0002g0168 a0001c0001t0002g0177 a0001c0001t0002g0181 a0001c0001t0002g0187 a0001c0001t0002g0190 a0001c0001t0002g0191	31	246	0.1260	-12	c.660 others(29): Show c.660+2333_660+2344delGGAAGGAAGGAA	PIGL	ENSG00000108474.17	transcript	ENST00000225609.10	protein_coding	6/6		INFO_REALIGN_3_PRIME	chr17	TogoVar
PIGL_chr17_16212210_16331411	16328593	AAAAAAAA others(5): Show AAAAAAAATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01074.hp2 HG01257.hp2 HG01074.hp2 HG01257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0066 a0001c0001t0002g0075 a0001c0001t0002g0066 a0001c0001t0002g0075	2	246	0.0081	-12	c.26 others(23): Show c.2696_*2707delAAAAAAATATAT	PIGL	ENSG00000108474.17	transcript	ENST00000225609.10	protein_coding		2183		chr17	TogoVar
PIGL_chr17_16212210_16331411	16328595	AAAAAATA others(5): Show AAAAAATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp1 HG00642.hp1 HG01069.hp2 others(18): Show HG00280.hp1 HG00642.hp1 HG01069.hp2 HG01071.hp2 HG01099.hp2 HG01175.hp2 HG01243.hp1 HG01361.hp1 HG01361.hp2 HG01952.hp1 HG02109.hp1 HG02615.hp2 HG02630.hp1 HG02683.hp2 HG02698.hp2 HG02922.hp2 HG03239.hp2 HG03492.hp1 HG03688.hp1 HG03927.hp1 NA20905.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0002c0002t0002 a0001c0001t0001 a0001c0001t0002 a0002c0002t0002	a0001c0001t0001g0116 a0001c0001t0001g0179 a0001c0001t0002g0032 others(18): Show a0001c0001t0001g0116 a0001c0001t0001g0179 a0001c0001t0002g0032 a0001c0001t0002g0038 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0079 a0001c0001t0002g0189 a0001c0001t0002g0234 a0001c0001t0002g0246 a0002c0002t0002g0052	21	246	0.0854	-12	c.26 others(23): Show c.2698_*2709delAAAAATATATAT	PIGL	ENSG00000108474.17	transcript	ENST00000225609.10	protein_coding		2185		chr17	TogoVar
PIGL_chr17_16212210_16331411	16328597	AAAATATA others(5): Show AAAATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01256.hp2 HG01258.hp1 HG01256.hp2 HG01258.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0067 a0001c0001t0002g0071 a0001c0001t0002g0067 a0001c0001t0002g0071	2	246	0.0081	-12	c.27 others(23): Show c.2700_*2711delAAATATATATAT	PIGL	ENSG00000108474.17	transcript	ENST00000225609.10	protein_coding		2187		chr17	TogoVar
PIGL_chr17_16212210_16331411	16328599	AATATATA others(5): Show AATATATATATAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00323.hp2 HG00621.hp1 HG00621.hp2 others(15): Show HG00323.hp2 HG00621.hp1 HG00621.hp2 HG01069.hp1 HG01070.hp1 HG01123.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01433.hp1 HG01928.hp2 HG02148.hp2 HG02886.hp1 HG02970.hp2 HG04115.hp2 NA18953.hp1 NA18995.hp1 NA19087.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0022 a0001c0001t0001g0049 a0001c0001t0001g0084 others(15): Show a0001c0001t0001g0022 a0001c0001t0001g0049 a0001c0001t0001g0084 a0001c0001t0001g0091 a0001c0001t0001g0123 a0001c0001t0001g0129 a0001c0001t0001g0164 a0001c0001t0001g0169 a0001c0001t0001g0180 a0001c0001t0001g0209 a0001c0001t0001g0221 a0001c0001t0001g0223 a0001c0001t0001g0226 a0001c0001t0001g0228 a0001c0001t0001g0245 a0001c0001t0002g0035 a0001c0001t0002g0059 a0001c0001t0002g0083	18	246	0.0732	-12	c.27 others(23): Show c.2702_*2713delATATATATATAT	PIGL	ENSG00000108474.17	transcript	ENST00000225609.10	protein_coding		2189		chr17	TogoVar
PIGN_chr18_62036164_62192056	62038919	AAATAATA others(5): Show AAATAATAATAAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00280.hp1 HG00408.hp1 others(119): Show HG00099.hp1 HG00280.hp1 HG00408.hp1 HG00438.hp2 HG00558.hp2 HG00609.hp1 HG00639.hp2 HG00642.hp1 HG00733.hp1 HG00738.hp2 HG00741.hp2 HG01069.hp2 HG01081.hp1 HG01099.hp1 HG01106.hp1 HG01109.hp2 HG01168.hp1 HG01261.hp1 HG01884.hp1 HG01934.hp1 HG01943.hp2 HG01981.hp1 HG01993.hp2 HG02027.hp2 HG02040.hp2 HG02056.hp1 HG02071.hp1 HG02071.hp2 HG02083.hp1 HG02129.hp1 HG02129.hp2 HG02165.hp1 HG02258.hp2 HG02293.hp1 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02572.hp2 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02630.hp2 HG02683.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02738.hp2 HG02809.hp2 HG02886.hp1 HG02895.hp2 HG02896.hp2 HG02922.hp2 HG02976.hp1 HG02976.hp2 HG03139.hp1 HG03209.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03540.hp2 HG03669.hp2 HG03688.hp2 HG03710.hp1 HG03831.hp1 HG03834.hp2 HG03927.hp2 HG03942.hp2 HG04184.hp2 HG04199.hp2 HG04204.hp1 NA18612.hp1 NA18747.hp2 NA18941.hp2 NA18942.hp1 NA18942.hp2 NA18944.hp1 NA18945.hp1 NA18948.hp1 NA18951.hp2 NA18953.hp1 NA18953.hp2 NA18957.hp1 NA18961.hp1 NA18962.hp1 NA18962.hp2 NA18963.hp1 NA18963.hp2 NA18964.hp2 NA18966.hp2 NA18972.hp2 NA18973.hp1 NA18974.hp1 NA18978.hp1 NA18983.hp2 NA18985.hp1 NA18986.hp1 NA18989.hp1 NA18991.hp1 NA18992.hp1 NA18995.hp2 NA18999.hp1 NA19010.hp1 NA19010.hp2 NA19012.hp1 NA19012.hp2 NA19056.hp1 NA19057.hp1 NA19058.hp2 NA19063.hp1 NA19066.hp1 NA19067.hp2 NA19077.hp1 NA19079.hp2 NA19081.hp1 NA19084.hp1 NA19091.hp1 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20905.hp2	a0001 a0004 a0006 a0001 a0004 a0006	a0001c0001 a0001c0003 a0001c0009 others(5): Show a0001c0001 a0001c0003 a0001c0009 a0001c0016 a0001c0017 a0004c0006 a0004c0007 a0006c0018	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(50): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0012 a0001c0001t0013 a0001c0001t0017 a0001c0001t0018 a0001c0001t0023 a0001c0001t0030 a0001c0001t0039 a0001c0001t0040 a0001c0001t0056 a0001c0001t0060 a0001c0001t0071 a0001c0001t0076 a0001c0001t0126 a0001c0001t0127 a0001c0001t0128 a0001c0001t0131 a0001c0001t0132 a0001c0001t0133 a0001c0001t0149 a0001c0001t0153 a0001c0003t0001 a0001c0003t0002 a0001c0003t0045 a0001c0003t0129 a0001c0009t0052 a0001c0009t0053 a0001c0009t0054 a0001c0016t0003 a0001c0017t0013 a0004c0006t0025 a0004c0006t0031 a0004c0006t0057 a0004c0006t0067 a0004c0006t0093 a0004c0006t0134 a0004c0006t0135 a0004c0006t0136 a0004c0006t0137 a0004c0007t0059 a0004c0007t0060 a0004c0007t0061 a0004c0007t0120 a0004c0007t0121 a0004c0007t0122 a0004c0007t0145 a0004c0007t0146 a0004c0007t0147 a0004c0007t0148 a0006c0018t0125	a0001c0001t0001g0055 a0001c0001t0001g0179 a0001c0001t0001g0192 others(117): Show a0001c0001t0001g0055 a0001c0001t0001g0179 a0001c0001t0001g0192 a0001c0001t0001g0196 a0001c0001t0001g0198 a0001c0001t0001g0225 a0001c0001t0001g0230 a0001c0001t0001g0231 a0001c0001t0001g0233 a0001c0001t0001g0234 a0001c0001t0001g0251 a0001c0001t0001g0254 a0001c0001t0001g0256 a0001c0001t0001g0258 a0001c0001t0002g0002 a0001c0001t0002g0133 a0001c0001t0002g0178 a0001c0001t0002g0182 a0001c0001t0002g0200 a0001c0001t0002g0228 a0001c0001t0002g0237 a0001c0001t0002g0239 a0001c0001t0003g0180 a0001c0001t0003g0190 a0001c0001t0003g0193 a0001c0001t0003g0195 a0001c0001t0003g0212 a0001c0001t0003g0221 a0001c0001t0003g0229 a0001c0001t0003g0238 a0001c0001t0003g0265 a0001c0001t0003g0270 a0001c0001t0005g0187 a0001c0001t0005g0194 a0001c0001t0005g0214 a0001c0001t0005g0235 a0001c0001t0005g0236 a0001c0001t0005g0249 a0001c0001t0005g0267 a0001c0001t0005g0278 a0001c0001t0005g0279 a0001c0001t0012g0222 a0001c0001t0012g0223 a0001c0001t0012g0248 a0001c0001t0012g0266 a0001c0001t0012g0271 a0001c0001t0012g0276 a0001c0001t0013g0185 a0001c0001t0013g0189 a0001c0001t0013g0220 a0001c0001t0013g0253 a0001c0001t0013g0263 a0001c0001t0017g0210 a0001c0001t0017g0213 a0001c0001t0017g0219 a0001c0001t0017g0252 a0001c0001t0017g0268 a0001c0001t0018g0054 a0001c0001t0018g0232 a0001c0001t0018g0264 a0001c0001t0018g0275 a0001c0001t0023g0188 a0001c0001t0023g0255 a0001c0001t0023g0257 a0001c0001t0023g0284 a0001c0001t0030g0183 a0001c0001t0030g0269 a0001c0001t0030g0281 a0001c0001t0039g0259 a0001c0001t0039g0262 a0001c0001t0040g0250 a0001c0001t0040g0261 a0001c0001t0056g0134 a0001c0001t0056g0186 a0001c0001t0060g0338 a0001c0001t0071g0015 a0001c0001t0076g0260 a0001c0001t0126g0224 a0001c0001t0127g0216 a0001c0001t0128g0217 a0001c0001t0131g0208 a0001c0001t0132g0211 a0001c0001t0133g0280 a0001c0001t0149g0314 a0001c0001t0153g0320 a0001c0003t0001g0110 a0001c0003t0002g0226 a0001c0003t0045g0057 a0001c0003t0129g0227 a0001c0009t0052g0286 a0001c0009t0053g0287 a0001c0009t0054g0285 a0001c0009t0054g0288 a0001c0016t0003g0209 a0001c0017t0013g0199 a0004c0006t0025g0005 a0004c0006t0025g0006 a0004c0006t0025g0008 a0004c0006t0031g0003 a0004c0006t0031g0303 a0004c0006t0057g0299 a0004c0006t0057g0304 a0004c0006t0067g0007 a0004c0006t0093g0218 a0004c0006t0134g0310 a0004c0006t0135g0301 a0004c0006t0136g0298 a0004c0006t0137g0300 a0004c0007t0059g0319 a0004c0007t0060g0315 a0004c0007t0061g0311 a0004c0007t0061g0321 a0004c0007t0120g0207 a0004c0007t0121g0203 a0004c0007t0122g0204 a0004c0007t0145g0312 a0004c0007t0146g0317 a0004c0007t0147g0313 a0004c0007t0148g0316 a0006c0018t0125g0181	122	342	0.3567	-12	c.69 others(23): Show c.6925_*6936delATTATTATTATT	PIGN	ENSG00000197563.11	transcript	ENST00000640252.2	protein_coding		2244		chr18	TogoVar
PIGN_chr18_62036164_62192056	62041638	CGGGTGTG others(5): Show CGGGTGTGTGTGT	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA19010.hp1 NA19010.hp1	a0004 a0004	a0004c0006 a0004c0006	a0004c0006t0136 a0004c0006t0136	a0004c0006t0136g0298 a0004c0006t0136g0298	1	342	0.0029	-12	c.42 others(23): Show c.4206_*4217delACACACACACCC	PIGN	ENSG00000197563.11	transcript	ENST00000640252.2	protein_coding	31/31	4206		chr18	TogoVar
PIGN_chr18_62036164_62192056	62071863	CATATATA others(5): Show CATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00642.hp2 HG00738.hp1 others(20): Show HG00408.hp1 HG00642.hp2 HG00738.hp1 HG01071.hp1 HG01074.hp1 HG01081.hp2 HG01516.hp2 HG02647.hp1 HG02647.hp2 HG02895.hp1 HG02897.hp2 HG02922.hp1 HG03209.hp1 HG03453.hp1 HG03491.hp1 NA18941.hp1 NA18943.hp1 NA18946.hp2 NA18957.hp1 NA18964.hp2 NA19077.hp2 NA19079.hp1 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0002 a0001c0001 a0001c0003 a0002c0002	a0001c0001t0002 a0001c0001t0012 a0001c0001t0017 others(19): Show a0001c0001t0002 a0001c0001t0012 a0001c0001t0017 a0001c0003t0004 a0001c0003t0008 a0001c0003t0014 a0001c0003t0109 a0001c0003t0111 a0001c0003t0112 a0001c0003t0113 a0002c0002t0007 a0002c0002t0014 a0002c0002t0019 a0002c0002t0026 a0002c0002t0048 a0002c0002t0069 a0002c0002t0085 a0002c0002t0086 a0002c0002t0091 a0002c0002t0096 a0002c0002t0108 a0002c0002t0110	a0001c0001t0002g0228 a0001c0001t0012g0223 a0001c0001t0017g0219 others(20): Show a0001c0001t0002g0228 a0001c0001t0012g0223 a0001c0001t0017g0219 a0001c0003t0004g0019 a0001c0003t0008g0037 a0001c0003t0014g0056 a0001c0003t0109g0069 a0001c0003t0111g0032 a0001c0003t0112g0034 a0001c0003t0113g0033 a0002c0002t0007g0081 a0002c0002t0014g0082 a0002c0002t0019g0095 a0002c0002t0026g0044 a0002c0002t0048g0086 a0002c0002t0048g0131 a0002c0002t0069g0013 a0002c0002t0085g0096 a0002c0002t0086g0097 a0002c0002t0091g0040 a0002c0002t0096g0085 a0002c0002t0108g0075 a0002c0002t0110g0076	23	342	0.0673	-12	c.267 others(29): Show c.2672+798_2672+809delATATATATATAT	PIGN	ENSG00000197563.11	transcript	ENST00000640252.2	protein_coding	30/30			chr18	TogoVar
PIGN_chr18_62036164_62192056	62167286	ATGTGTGT others(5): Show ATGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG02647.hp2 HG02723.hp1 others(5): Show HG01255.hp1 HG02647.hp2 HG02723.hp1 HG02886.hp2 HG02895.hp1 HG02897.hp2 HG02922.hp1 NA19240.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0011 a0001c0003t0087 a0001c0003t0109 others(3): Show a0001c0003t0011 a0001c0003t0087 a0001c0003t0109 a0001c0003t0111 a0001c0003t0112 a0001c0003t0113	a0001c0003t0011g0035 a0001c0003t0011g0107 a0001c0003t0011g0108 others(5): Show a0001c0003t0011g0035 a0001c0003t0011g0107 a0001c0003t0011g0108 a0001c0003t0087g0068 a0001c0003t0109g0069 a0001c0003t0111g0032 a0001c0003t0112g0034 a0001c0003t0113g0033	8	342	0.0234	-12	c.-23 others(31): Show c.-235-3642_-235-3631delCACACACACACA	PIGN	ENSG00000197563.11	transcript	ENST00000640252.2	protein_coding	1/30			chr18	TogoVar
PIGO_chr9_35083688_35101591	35084128	CTAAATAA others(5): Show CTAAATAAATAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01106.hp2 HG01109.hp2 HG02257.hp1 others(6): Show HG01106.hp2 HG01109.hp2 HG02257.hp1 HG02486.hp1 HG02818.hp2 HG02970.hp2 HG03225.hp2 NA18906.hp2 NA18962.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0004 a0001c0002t0001 a0001c0001t0001 a0001c0001t0004 a0001c0002t0001	a0001c0001t0001g0002 a0001c0001t0004g0025 a0001c0002t0001g0003 a0001c0001t0001g0002 a0001c0001t0004g0025 a0001c0002t0001g0003	9	426	0.0211	-12	c.49 others(23): Show c.4952_*4963delTTTATTTATTTA	PIGO	ENSG00000165282.15	transcript	ENST00000378617.4	protein_coding		4559		chr9	TogoVar
PIGP_chr21_37060374_37078071	37066971	CGTGTGTG others(5): Show CGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG01123.hp1 HG02922.hp1 HG03098.hp2 others(3): Show HG01123.hp1 HG02922.hp1 HG03098.hp2 NA18522.hp2 NA18955.hp1 NA18983.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0046 a0001c0001t0001g0110 a0001c0001t0002g0037 others(1): Show a0001c0001t0001g0046 a0001c0001t0001g0110 a0001c0001t0002g0037 a0001c0001t0002g0066	6	436	0.0138	-12	c.274 others(27): Show c.274+279_274+290delACACACACACAC	PIGP	ENSG00000185808.14	transcript	ENST00000360525.9	protein_coding	4/4			chr21	TogoVar
PIGR_chr1_206923522_206951466	206926983	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03942.hp1 NA19240.hp2 HG03942.hp1 NA19240.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0003c0003t0016 a0001c0001t0001 a0003c0003t0016	a0001c0001t0001g0003 a0003c0003t0016g0080 a0001c0001t0001g0003 a0003c0003t0016g0080	2	402	0.0050	-12	c.33 others(23): Show c.3323_*3334delTTTTTTTTTTTT	PIGR	ENSG00000162896.6	transcript	ENST00000356495.5	protein_coding		1538		chr1	TogoVar
PIGS_chr17_28548387_28576524	28553639	GACACACA others(5): Show GACACACACACAC	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00408.hp2 HG00408.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0021 a0001c0001t0021	a0001c0001t0021g0102 a0001c0001t0021g0102	1	330	0.0030	-12	c.56 others(21): Show c.569_*580delGTGTGTGTGTGT	PIGS	ENSG00000087111.22	transcript	ENST00000308360.8	protein_coding	12/12	569		chr17	TogoVar
PIGS_chr17_28548387_28576524	28564997	TGTTCTTT others(5): Show TGTTCTTTCTAAA	T T	intron_variant intron_variant	MODIFIER	NA19054.hp2 NA19054.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0119 a0001c0001t0013g0119	1	330	0.0030	-12	c.287 others(29): Show c.287-1102_287-1091delTTTAGAAAGAAC	PIGS	ENSG00000087111.22	transcript	ENST00000308360.8	protein_coding	3/11			chr17	TogoVar
PIGS_chr17_28548387_28576524	28575658	TTGGCATG others(5): Show TTGGCATGAGTCC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18989.hp2 NA18989.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0022 a0001c0001t0022	a0001c0001t0022g0103 a0001c0001t0022g0103	1	330	0.0030	-12	c.-41 others(23): Show c.-4174_-4163delGGACTCATGCCA	PIGS	ENSG00000087111.22	transcript	ENST00000308360.8	protein_coding		4135		chr17	TogoVar
PIGT_chr20_45411141_45431241	45412938	CAGCCCTG others(5): Show CAGCCCTGCCTGG	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp2 HG00323.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0236 a0001c0003t0001g0236	1	462	0.0022	-12	c.-32 others(23): Show c.-3218_-3207delAGCCCTGCCTGG	PIGT	ENSG00000124155.19	transcript	ENST00000279036.12	protein_coding		3202		chr20	TogoVar
PIGT_chr20_45411141_45431241	45425137	CTTTCTCT others(5): Show CTTTCTCTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00738.hp2 HG00741.hp1 others(42): Show HG00408.hp1 HG00738.hp2 HG00741.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01081.hp2 HG01256.hp1 HG01257.hp1 HG01258.hp2 HG01261.hp1 HG01361.hp1 HG01517.hp2 HG01952.hp1 HG01952.hp2 HG02027.hp2 HG02040.hp2 HG02145.hp1 HG02280.hp2 HG02300.hp2 HG02486.hp1 HG02572.hp1 HG02717.hp2 HG02735.hp1 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03195.hp2 HG03491.hp1 HG03492.hp2 HG03540.hp2 HG04199.hp1 NA18952.hp2 NA18964.hp1 NA18995.hp2 NA19000.hp2 NA19003.hp2 NA19057.hp2 NA19064.hp1 NA19078.hp2 NA19082.hp2 NA19087.hp1 NA19090.hp2 NA20129.hp2 NA20300.hp1	a0001 a0009 a0001 a0009	a0001c0001 a0001c0003 a0001c0008 others(1): Show a0001c0001 a0001c0003 a0001c0008 a0009c0014	a0001c0001t0001 a0001c0003t0001 a0001c0008t0001 others(1): Show a0001c0001t0001 a0001c0003t0001 a0001c0008t0001 a0009c0014t0001	a0001c0001t0001g0002 a0001c0001t0001g0070 a0001c0001t0001g0118 others(30): Show a0001c0001t0001g0002 a0001c0001t0001g0070 a0001c0001t0001g0118 a0001c0001t0001g0127 a0001c0001t0001g0129 a0001c0001t0001g0142 a0001c0001t0001g0176 a0001c0001t0001g0268 a0001c0001t0001g0272 a0001c0001t0001g0304 a0001c0001t0001g0307 a0001c0001t0001g0309 a0001c0001t0001g0316 a0001c0003t0001g0002 a0001c0003t0001g0009 a0001c0003t0001g0046 a0001c0003t0001g0048 a0001c0003t0001g0149 a0001c0003t0001g0152 a0001c0003t0001g0163 a0001c0003t0001g0168 a0001c0003t0001g0169 a0001c0003t0001g0193 a0001c0003t0001g0200 a0001c0003t0001g0230 a0001c0003t0001g0239 a0001c0003t0001g0243 a0001c0003t0001g0250 a0001c0003t0001g0251 a0001c0003t0001g0254 a0001c0003t0001g0277 a0001c0008t0001g0212 a0009c0014t0001g0106	45	462	0.0974	-12	c.148 others(29): Show c.1485-435_1485-424delTTCTCTTTCTTT	PIGT	ENSG00000124155.19	transcript	ENST00000279036.12	protein_coding	11/11		INFO_REALIGN_3_PRIME	chr20	TogoVar
PIGT_chr20_45411141_45431241	45425141	CTCTTTCT others(5): Show CTCTTTCTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG01255.hp2 HG01928.hp2 others(43): Show HG01106.hp2 HG01255.hp2 HG01928.hp2 HG01978.hp2 HG02004.hp1 HG02004.hp2 HG02015.hp1 HG02132.hp2 HG02135.hp1 HG02148.hp2 HG02155.hp1 HG02273.hp2 HG02523.hp2 HG02602.hp1 HG02717.hp1 HG02818.hp2 HG03491.hp2 HG03654.hp1 HG04115.hp1 HG04204.hp1 HG04228.hp2 NA18950.hp1 NA18954.hp1 NA18963.hp1 NA18965.hp2 NA18966.hp1 NA18970.hp2 NA18974.hp1 NA18977.hp2 NA18983.hp2 NA18986.hp1 NA18997.hp2 NA19002.hp2 NA19003.hp1 NA19005.hp2 NA19010.hp1 NA19054.hp2 NA19058.hp1 NA19066.hp2 NA19067.hp1 NA19070.hp1 NA19076.hp1 NA19084.hp1 NA19085.hp2 NA19240.hp2 NA20300.hp2	a0001 a0002 a0012 a0001 a0002 a0012	a0001c0001 a0001c0002 a0002c0004 others(1): Show a0001c0001 a0001c0002 a0002c0004 a0012c0011	a0001c0001t0001 a0001c0002t0001 a0002c0004t0001 others(1): Show a0001c0001t0001 a0001c0002t0001 a0002c0004t0001 a0012c0011t0001	a0001c0001t0001g0026 a0001c0001t0001g0050 a0001c0001t0001g0052 others(23): Show a0001c0001t0001g0026 a0001c0001t0001g0050 a0001c0001t0001g0052 a0001c0001t0001g0077 a0001c0001t0001g0121 a0001c0001t0001g0124 a0001c0001t0001g0134 a0001c0001t0001g0211 a0001c0001t0001g0245 a0001c0001t0001g0278 a0001c0002t0001g0001 a0001c0002t0001g0035 a0001c0002t0001g0053 a0001c0002t0001g0068 a0001c0002t0001g0073 a0001c0002t0001g0080 a0001c0002t0001g0091 a0001c0002t0001g0101 a0001c0002t0001g0102 a0001c0002t0001g0203 a0001c0002t0001g0209 a0001c0002t0001g0224 a0001c0002t0001g0241 a0002c0004t0001g0010 a0002c0004t0001g0284 a0012c0011t0001g0192	46	462	0.0996	-12	c.148 others(29): Show c.1485-377_1485-366delTTCTTTCTTTCT	PIGT	ENSG00000124155.19	transcript	ENST00000279036.12	protein_coding	11/11		INFO_REALIGN_3_PRIME	chr20	TogoVar
PIGU_chr20_34555542_34682092	34589104	TACACACA others(5): Show TACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00423.hp2 HG00673.hp2 others(83): Show HG00408.hp2 HG00423.hp2 HG00673.hp2 HG00733.hp2 HG00738.hp2 HG00741.hp1 HG01243.hp1 HG01256.hp2 HG01258.hp2 HG01361.hp1 HG01934.hp1 HG01993.hp2 HG02004.hp2 HG02027.hp1 HG02056.hp2 HG02074.hp1 HG02109.hp2 HG02129.hp2 HG02132.hp1 HG02135.hp1 HG02155.hp2 HG02257.hp2 HG02273.hp2 HG02280.hp1 HG02572.hp2 HG02723.hp1 HG02818.hp1 HG02895.hp1 HG03139.hp1 HG03139.hp2 HG03195.hp2 HG03831.hp1 HG04115.hp2 HG04204.hp1 NA18747.hp2 NA18940.hp1 NA18943.hp1 NA18945.hp2 NA18946.hp2 NA18950.hp1 NA18953.hp1 NA18954.hp2 NA18955.hp2 NA18960.hp1 NA18962.hp2 NA18963.hp1 NA18964.hp2 NA18966.hp1 NA18967.hp2 NA18968.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp2 NA18978.hp1 NA18980.hp1 NA18981.hp2 NA18982.hp2 NA18984.hp1 NA18985.hp2 NA18986.hp2 NA18989.hp2 NA18990.hp2 NA18991.hp2 NA18992.hp1 NA18993.hp1 NA18994.hp2 NA18995.hp1 NA18997.hp2 NA18998.hp2 NA19000.hp1 NA19004.hp1 NA19009.hp2 NA19010.hp2 NA19011.hp1 NA19055.hp1 NA19060.hp2 NA19063.hp2 NA19066.hp1 NA19066.hp2 NA19078.hp1 NA19079.hp1 NA19085.hp2 NA19086.hp1 NA19090.hp1 NA20129.hp2 NA20752.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0004 a0003c0004t0001	a0001c0001t0001g0012 a0001c0001t0001g0024 a0001c0001t0001g0028 others(83): Show a0001c0001t0001g0012 a0001c0001t0001g0024 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0001t0001g0050 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0062 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0127 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0157 a0001c0001t0001g0313 a0001c0001t0003g0105 a0001c0001t0004g0185 a0003c0004t0001g0215	86	320	0.2688	-12	c.628 others(27): Show c.628-509_628-498delGTGTGTGTGTGT	PIGU	ENSG00000101464.11	transcript	ENST00000217446.8	protein_coding	7/11			chr20	TogoVar
PIGU_chr20_34555542_34682092	34631722	CATATATA others(5): Show CATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG01515.hp2 HG02738.hp2 HG01515.hp2 HG02738.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0231 a0001c0001t0001g0234 a0001c0001t0001g0231 a0001c0001t0001g0234	2	320	0.0063	-12	c.529 others(29): Show c.529+2881_529+2892delATATATATATAT	PIGU	ENSG00000101464.11	transcript	ENST00000217446.8	protein_coding	6/11			chr20	TogoVar
PIGU_chr20_34555542_34682092	34631785	ATTTTTTT others(5): Show ATTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02698.hp1 HG04199.hp2 HG02698.hp1 HG04199.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0063 a0001c0001t0001g0080 a0001c0001t0001g0063 a0001c0001t0001g0080	2	320	0.0063	-12	c.529 others(29): Show c.529+2818_529+2829delAAAAAAAAAAAA	PIGU	ENSG00000101464.11	transcript	ENST00000217446.8	protein_coding	6/11			chr20	TogoVar
PIGU_chr20_34555542_34682092	34640525	ACACACAC others(5): Show ACACACACACACC	A A	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG03471.hp1 HG02622.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0258 a0001c0001t0001g0259 a0001c0001t0001g0258 a0001c0001t0001g0259	2	320	0.0063	-12	c.319 others(29): Show c.319-2552_319-2541delGGTGTGTGTGTG	PIGU	ENSG00000101464.11	transcript	ENST00000217446.8	protein_coding	4/11			chr20	TogoVar
PIGU_chr20_34555542_34682092	34666687	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0267 a0001c0001t0001g0267	1	320	0.0031	-12	c.131 others(29): Show c.131-9455_131-9444delAAAAAAAAAAAA	PIGU	ENSG00000101464.11	transcript	ENST00000217446.8	protein_coding	1/11			chr20	TogoVar
PIGU_chr20_34555542_34682092	34668867	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02970.hp2 HG03098.hp2 others(2): Show HG02055.hp2 HG02970.hp2 HG03098.hp2 HG03225.hp2 NA18992.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 others(2): Show a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0266 a0001c0001t0001g0310	5	320	0.0156	-12	c.130 others(29): Show c.130+8077_130+8088delAAAAAAAAAAAA	PIGU	ENSG00000101464.11	transcript	ENST00000217446.8	protein_coding	1/11			chr20	TogoVar
PIGX_chr3_196707377_196741007	196732216	TTATATAT others(5): Show TTATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG00741.hp2 HG01069.hp1 others(22): Show HG00544.hp1 HG00741.hp2 HG01069.hp1 HG01106.hp1 HG01255.hp2 HG01258.hp2 HG01346.hp2 HG01361.hp1 HG02004.hp1 HG02132.hp2 HG02165.hp1 HG02258.hp2 HG02273.hp2 HG02293.hp2 HG02647.hp1 HG02886.hp1 NA18522.hp2 NA18984.hp1 NA18998.hp2 NA19072.hp1 NA19074.hp2 NA19077.hp1 NA19087.hp2 NA19240.hp1 NA20300.hp1	a0001 a0003 a0007 a0001 a0003 a0007	a0001c0001 a0003c0006 a0007c0011 a0001c0001 a0003c0006 a0007c0011	a0001c0001t0002 a0001c0001t0004 a0001c0001t0012 others(5): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0012 a0001c0001t0034 a0001c0001t0035 a0001c0001t0036 a0003c0006t0002 a0007c0011t0032	a0001c0001t0002g0003 a0001c0001t0002g0012 a0001c0001t0002g0019 others(16): Show a0001c0001t0002g0003 a0001c0001t0002g0012 a0001c0001t0002g0019 a0001c0001t0002g0058 a0001c0001t0002g0075 a0001c0001t0002g0085 a0001c0001t0002g0086 a0001c0001t0002g0088 a0001c0001t0002g0092 a0001c0001t0002g0093 a0001c0001t0002g0255 a0001c0001t0004g0050 a0001c0001t0012g0003 a0001c0001t0034g0065 a0001c0001t0035g0003 a0001c0001t0036g0012 a0003c0006t0002g0063 a0003c0006t0002g0081 a0007c0011t0032g0095	25	416	0.0601	-12	c.633 others(29): Show c.633+1154_633+1165delATATATATATAT	PIGX	ENSG00000163964.18	transcript	ENST00000392391.9	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
PIGX_chr3_196707377_196741007	196732259	TTATTTTA others(5): Show TTATTTTATTTTA	T T	intron_variant intron_variant	MODIFIER	NA19078.hp1 NA19078.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0021 a0001c0007t0021	a0001c0007t0021g0148 a0001c0007t0021g0148	1	416	0.0024	-12	c.633 others(29): Show c.633+1169_633+1180delATTTTATTTTAT	PIGX	ENSG00000163964.18	transcript	ENST00000392391.9	protein_coding	5/5		INFO_REALIGN_3_PRIME	chr3	TogoVar
PIGX_chr3_196707377_196741007	196735294	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01891.hp1 HG02572.hp1 HG02809.hp1 others(2): Show HG01891.hp1 HG02572.hp1 HG02809.hp1 HG03195.hp2 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0059 a0001c0001t0016g0060 a0001c0001t0016g0061 others(2): Show a0001c0001t0016g0059 a0001c0001t0016g0060 a0001c0001t0016g0061 a0001c0001t0016g0062 a0001c0001t0016g0078	5	416	0.0120	-12	c.14 others(23): Show c.1411_*1422delAAAAAAAAAAAA	PIGX	ENSG00000163964.18	transcript	ENST00000392391.9	protein_coding	6/6	1411	INFO_REALIGN_3_PRIME	chr3	TogoVar
PIGY_chr4_88515998_88528776	88516483	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19001.hp1 NA19001.hp2 NA19001.hp1 NA19001.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0001 a0001c0001t0001g0002	2	446	0.0045	-12	c.50 others(23): Show c.5079_*5090delTTTTTTTTTTTT	PIGY	ENSG00000255072.2	transcript	ENST00000527353.2	protein_coding		4514		chr4	TogoVar
PIGZ_chr3_196941356_196973833	196944013	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02280.hp2 HG02280.hp2	a0006 a0006	a0006c0016 a0006c0016	a0006c0016t0002 a0006c0016t0002	a0006c0016t0002g0063 a0006c0016t0002g0063	1	424	0.0024	-12	c.31 others(23): Show c.3132_*3143delTTTTTTTTTTTT	PIGZ	ENSG00000119227.8	transcript	ENST00000412723.6	protein_coding		2342		chr3	TogoVar
PIGZ_chr3_196941356_196973833	196949025	CCTTCCTT others(5): Show CCTTCCTTCCCTT	C C	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00673.hp1 HG03017.hp2 others(9): Show HG00544.hp2 HG00673.hp1 HG03017.hp2 HG04115.hp1 NA18947.hp1 NA18971.hp2 NA18977.hp1 NA18980.hp1 NA18992.hp2 NA19002.hp2 NA19066.hp2 NA19091.hp1	a0005 a0007 a0012 others(1): Show a0005 a0007 a0012 a0016	a0005c0014 a0007c0018 a0007c0026 others(3): Show a0005c0014 a0007c0018 a0007c0026 a0007c0054 a0012c0035 a0016c0055	a0005c0014t0001 a0007c0018t0001 a0007c0018t0004 others(4): Show a0005c0014t0001 a0007c0018t0001 a0007c0018t0004 a0007c0026t0001 a0007c0054t0001 a0012c0035t0001 a0016c0055t0001	a0005c0014t0001g0070 a0007c0018t0001g0008 a0007c0018t0004g0182 others(7): Show a0005c0014t0001g0070 a0007c0018t0001g0008 a0007c0018t0004g0182 a0007c0026t0001g0089 a0007c0026t0001g0125 a0007c0026t0001g0169 a0007c0054t0001g0170 a0012c0035t0001g0068 a0012c0035t0001g0069 a0016c0055t0001g0071	12	424	0.0283	-12	c.212 others(27): Show c.212-352_212-341delAAGGGAAGGAAG	PIGZ	ENSG00000119227.8	transcript	ENST00000412723.6	protein_coding	2/2			chr3	TogoVar
PIGZ_chr3_196941356_196973833	196973151	CTTATTTA others(5): Show CTTATTTATTTAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00673.hp2 HG00673.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0001 a0001c0007t0001	a0001c0007t0001g0346 a0001c0007t0001g0346	1	424	0.0024	-12	c.-44 others(23): Show c.-4477_-4466delATAAATAAATAA	PIGZ	ENSG00000119227.8	transcript	ENST00000412723.6	protein_coding		4319		chr3	TogoVar
PIGZ_chr3_196941356_196973833	196973201	TCCCTCTC others(5): Show TCCCTCTCCCTCG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00733.hp2 others(57): Show HG00140.hp1 HG00140.hp2 HG00733.hp2 HG00738.hp1 HG00741.hp1 HG01074.hp1 HG01081.hp1 HG01099.hp1 HG01106.hp2 HG01123.hp2 HG01243.hp2 HG01255.hp1 HG01256.hp1 HG01258.hp2 HG01884.hp1 HG01975.hp2 HG02027.hp2 HG02055.hp1 HG02055.hp2 HG02148.hp1 HG02257.hp2 HG02486.hp1 HG02486.hp2 HG02559.hp2 HG02572.hp2 HG02622.hp1 HG02647.hp1 HG02698.hp2 HG02723.hp2 HG02818.hp1 HG02886.hp2 HG02895.hp1 HG02897.hp2 HG02965.hp1 HG02965.hp2 HG02970.hp1 HG03041.hp1 HG03041.hp2 HG03139.hp1 HG03453.hp2 HG03486.hp2 HG03490.hp1 HG03516.hp1 HG03516.hp2 HG03669.hp1 HG03669.hp2 HG03831.hp1 HG03927.hp2 HG03942.hp2 HG04199.hp1 HG04228.hp1 HG04228.hp2 NA18522.hp1 NA18522.hp2 NA18906.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20300.hp1 NA20905.hp2	a0001 a0002 a0003 others(7): Show a0001 a0002 a0003 a0004 a0005 a0006 a0009 a0013 a0014 a0023	a0001c0001 a0001c0004 a0001c0006 others(21): Show a0001c0001 a0001c0004 a0001c0006 a0001c0007 a0001c0012 a0001c0022 a0002c0002 a0002c0005 a0002c0025 a0003c0003 a0004c0008 a0004c0009 a0004c0017 a0004c0043 a0004c0047 a0005c0028 a0005c0049 a0006c0013 a0006c0016 a0006c0032 a0009c0024 a0013c0050 a0014c0058 a0023c0037	a0001c0001t0001 a0001c0001t0002 a0001c0004t0001 others(24): Show a0001c0001t0001 a0001c0001t0002 a0001c0004t0001 a0001c0006t0001 a0001c0007t0001 a0001c0012t0001 a0001c0022t0001 a0002c0002t0001 a0002c0002t0002 a0002c0005t0001 a0002c0025t0001 a0003c0003t0001 a0004c0008t0001 a0004c0008t0002 a0004c0009t0001 a0004c0017t0002 a0004c0043t0001 a0004c0047t0001 a0005c0028t0002 a0005c0049t0002 a0006c0013t0001 a0006c0016t0001 a0006c0032t0001 a0009c0024t0001 a0013c0050t0001 a0014c0058t0006 a0023c0037t0003	a0001c0001t0001g0112 a0001c0001t0001g0175 a0001c0001t0001g0215 others(51): Show a0001c0001t0001g0112 a0001c0001t0001g0175 a0001c0001t0001g0215 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0248 a0001c0001t0002g0014 a0001c0001t0002g0082 a0001c0001t0002g0085 a0001c0001t0002g0097 a0001c0001t0002g0264 a0001c0001t0002g0287 a0001c0001t0002g0342 a0001c0004t0001g0101 a0001c0004t0001g0255 a0001c0004t0001g0257 a0001c0004t0001g0260 a0001c0006t0001g0017 a0001c0006t0001g0256 a0001c0006t0001g0339 a0001c0007t0001g0258 a0001c0007t0001g0265 a0001c0012t0001g0037 a0001c0022t0001g0267 a0002c0002t0001g0343 a0002c0002t0002g0262 a0002c0005t0001g0099 a0002c0005t0001g0243 a0002c0025t0001g0263 a0003c0003t0001g0096 a0004c0008t0001g0209 a0004c0008t0001g0227 a0004c0008t0002g0081 a0004c0008t0002g0084 a0004c0009t0001g0046 a0004c0009t0001g0083 a0004c0009t0001g0311 a0004c0017t0002g0040 a0004c0043t0001g0100 a0004c0047t0001g0253 a0005c0028t0002g0086 a0005c0049t0002g0098 a0006c0013t0001g0077 a0006c0013t0001g0093 a0006c0013t0001g0259 a0006c0016t0001g0080 a0006c0016t0001g0107 a0006c0032t0001g0281 a0006c0032t0001g0309 a0009c0024t0001g0038 a0009c0024t0001g0251 a0013c0050t0001g0055 a0014c0058t0006g0219 a0023c0037t0003g0214	60	424	0.1415	-12	c.-45 others(23): Show c.-4527_-4516delCGAGGGAGAGGG	PIGZ	ENSG00000119227.8	transcript	ENST00000412723.6	protein_coding		4369		chr3	TogoVar
PIK3AP1_chr10_96588315_96725514	96597271	TTTCCTTC others(5): Show TTTCCTTCCTTCC	T T	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01978.hp2 HG02109.hp1 others(10): Show HG01243.hp1 HG01978.hp2 HG02109.hp1 HG02602.hp2 HG02886.hp2 HG02965.hp2 HG03130.hp2 HG03195.hp2 HG03669.hp2 HG04204.hp1 NA18906.hp1 NA19058.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0009 a0001c0014 others(3): Show a0001c0001 a0001c0009 a0001c0014 a0002c0002 a0002c0011 a0003c0003	a0001c0001t0001 a0001c0009t0009 a0001c0014t0001 others(3): Show a0001c0001t0001 a0001c0009t0009 a0001c0014t0001 a0002c0002t0001 a0002c0011t0001 a0003c0003t0001	a0001c0001t0001g0002 a0001c0001t0001g0019 a0001c0009t0009g0241 others(10): Show a0001c0001t0001g0002 a0001c0001t0001g0019 a0001c0009t0009g0241 a0001c0014t0001g0030 a0002c0002t0001g0068 a0002c0002t0001g0168 a0002c0002t0001g0186 a0002c0011t0001g0079 a0002c0011t0001g0083 a0002c0011t0001g0221 a0002c0011t0001g0222 a0002c0011t0001g0223 a0003c0003t0001g0120	13	256	0.0508	-12	c.236 others(31): Show c.2361-1649_2361-1638delGGAAGGAAGGAA	PIK3AP1	ENSG00000155629.15	transcript	ENST00000339364.10	protein_coding	16/16			chr10	TogoVar
PIK3AP1_chr10_96588315_96725514	96603671	TACACACA others(5): Show TACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG01928.hp2 HG01993.hp2 others(4): Show HG00733.hp2 HG01928.hp2 HG01993.hp2 HG03579.hp2 NA18975.hp1 NA19062.hp1 NA19083.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0001 a0001c0006 a0001c0010 others(4): Show a0001c0001 a0001c0006 a0001c0010 a0002c0002 a0002c0005 a0003c0003 a0003c0012	a0001c0001t0001 a0001c0006t0002 a0001c0010t0002 others(4): Show a0001c0001t0001 a0001c0006t0002 a0001c0010t0002 a0002c0002t0001 a0002c0005t0002 a0003c0003t0001 a0003c0012t0002	a0001c0001t0001g0204 a0001c0006t0002g0049 a0001c0010t0002g0215 others(4): Show a0001c0001t0001g0204 a0001c0006t0002g0049 a0001c0010t0002g0215 a0002c0002t0001g0185 a0002c0005t0002g0139 a0003c0003t0001g0114 a0003c0012t0002g0113	7	256	0.0273	-12	c.224 others(29): Show c.2241+296_2241+307delGTGTGTGTGTGT	PIK3AP1	ENSG00000155629.15	transcript	ENST00000339364.10	protein_coding	15/16			chr10	TogoVar
PIK3AP1_chr10_96588315_96725514	96612944	GTGTGTGT others(5): Show GTGTGTGTATATA	G G	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG01070.hp2 HG01993.hp1 others(9): Show HG00609.hp1 HG01070.hp2 HG01993.hp1 HG02056.hp2 HG02080.hp2 HG02129.hp1 HG02165.hp2 HG03579.hp2 HG03704.hp2 NA18944.hp1 NA18982.hp2 NA19002.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0006 a0001c0010 others(3): Show a0001c0001 a0001c0006 a0001c0010 a0002c0002 a0003c0003 a0004c0004	a0001c0001t0001 a0001c0006t0002 a0001c0010t0002 others(3): Show a0001c0001t0001 a0001c0006t0002 a0001c0010t0002 a0002c0002t0001 a0003c0003t0001 a0004c0004t0002	a0001c0001t0001g0033 a0001c0001t0001g0213 a0001c0006t0002g0058 others(9): Show a0001c0001t0001g0033 a0001c0001t0001g0213 a0001c0006t0002g0058 a0001c0010t0002g0215 a0002c0002t0001g0148 a0002c0002t0001g0161 a0002c0002t0001g0164 a0002c0002t0001g0166 a0002c0002t0001g0184 a0003c0003t0001g0131 a0004c0004t0002g0039 a0004c0004t0002g0051	12	256	0.0469	-12	c.201 others(31): Show c.2015-3089_2015-3078delTATATACACACA	PIK3AP1	ENSG00000155629.15	transcript	ENST00000339364.10	protein_coding	13/16			chr10	TogoVar
PIK3AP1_chr10_96588315_96725514	96612972	ATATATAT others(5): Show ATATATATATATT	A A	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0002 a0002	a0002c0011 a0002c0011	a0002c0011t0001 a0002c0011t0001	a0002c0011t0001g0079 a0002c0011t0001g0079	1	256	0.0039	-12	c.201 others(31): Show c.2015-3117_2015-3106delAATATATATATA	PIK3AP1	ENSG00000155629.15	transcript	ENST00000339364.10	protein_coding	13/16			chr10	TogoVar
PIK3AP1_chr10_96588315_96725514	96612974	ATATATAT others(5): Show ATATATATATTTT	A A	intron_variant intron_variant	MODIFIER	HG01993.hp2 HG03017.hp2 NA18962.hp2 others(2): Show HG01993.hp2 HG03017.hp2 NA18962.hp2 NA19003.hp2 NA19079.hp1	a0002 a0006 a0008 others(1): Show a0002 a0006 a0008 a0011	a0002c0005 a0006c0013 a0008c0026 others(1): Show a0002c0005 a0006c0013 a0008c0026 a0011c0031	a0002c0005t0002 a0006c0013t0012 a0008c0026t0002 others(1): Show a0002c0005t0002 a0006c0013t0012 a0008c0026t0002 a0011c0031t0002	a0002c0005t0002g0139 a0002c0005t0002g0180 a0006c0013t0012g0128 others(2): Show a0002c0005t0002g0139 a0002c0005t0002g0180 a0006c0013t0012g0128 a0008c0026t0002g0102 a0011c0031t0002g0217	5	256	0.0195	-12	c.201 others(31): Show c.2015-3119_2015-3108delAAAATATATATA	PIK3AP1	ENSG00000155629.15	transcript	ENST00000339364.10	protein_coding	13/16			chr10	TogoVar
PIK3AP1_chr10_96588315_96725514	96612976	ATATATAT others(5): Show ATATATATTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00609.hp2 HG01928.hp2 others(4): Show HG00423.hp2 HG00609.hp2 HG01928.hp2 HG02040.hp2 NA18945.hp1 NA18975.hp1 NA19062.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0006 a0002c0005 a0002c0023 others(1): Show a0001c0006 a0002c0005 a0002c0023 a0003c0012	a0001c0006t0002 a0002c0005t0002 a0002c0023t0002 others(1): Show a0001c0006t0002 a0002c0005t0002 a0002c0023t0002 a0003c0012t0002	a0001c0006t0002g0049 a0001c0006t0002g0054 a0002c0005t0002g0177 others(4): Show a0001c0006t0002g0049 a0001c0006t0002g0054 a0002c0005t0002g0177 a0002c0023t0002g0170 a0003c0012t0002g0105 a0003c0012t0002g0113 a0003c0012t0002g0125	7	256	0.0273	-12	c.201 others(31): Show c.2015-3121_2015-3110delAAAAAATATATA	PIK3AP1	ENSG00000155629.15	transcript	ENST00000339364.10	protein_coding	13/16			chr10	TogoVar
PIK3AP1_chr10_96588315_96725514	96612982	ATTTTTTT others(5): Show ATTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG03540.hp1 HG01255.hp1 HG03540.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0027 a0001c0001 a0002c0027	a0001c0001t0001 a0002c0027t0001 a0001c0001t0001 a0002c0027t0001	a0001c0001t0001g0190 a0002c0027t0001g0165 a0001c0001t0001g0190 a0002c0027t0001g0165	2	256	0.0078	-12	c.201 others(31): Show c.2015-3127_2015-3116delAAAAAAAAAAAA	PIK3AP1	ENSG00000155629.15	transcript	ENST00000339364.10	protein_coding	13/16			chr10	TogoVar
PIK3AP1_chr10_96588315_96725514	96628898	ATATATAT others(5): Show ATATATATATGTG	A A	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02965.hp2 HG01243.hp1 HG02965.hp2	a0002 a0002	a0002c0011 a0002c0011	a0002c0011t0001 a0002c0011t0001	a0002c0011t0001g0221 a0002c0011t0001g0223 a0002c0011t0001g0221 a0002c0011t0001g0223	2	256	0.0078	-12	c.137 others(29): Show c.1376-417_1376-406delCACATATATATA	PIK3AP1	ENSG00000155629.15	transcript	ENST00000339364.10	protein_coding	8/16			chr10	TogoVar
PIK3AP1_chr10_96588315_96725514	96629930	AAAGAAGA others(5): Show AAAGAAGAAGAAG	A A	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG01891.hp2	a0001 a0001	a0001c0030 a0001c0030	a0001c0030t0004 a0001c0030t0004	a0001c0030t0004g0199 a0001c0030t0004g0199	1	256	0.0039	-12	c.137 others(31): Show c.1376-1449_1376-1438delCTTCTTCTTCTT	PIK3AP1	ENSG00000155629.15	transcript	ENST00000339364.10	protein_coding	8/16			chr10	TogoVar
PIK3AP1_chr10_96588315_96725514	96637314	TCACACAC others(5): Show TCACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0007 a0007	a0007c0035 a0007c0035	a0007c0035t0001 a0007c0035t0001	a0007c0035t0001g0251 a0007c0035t0001g0251	1	256	0.0039	-12	c.137 others(31): Show c.1375+8147_1375+8158delTGTGTGTGTGTG	PIK3AP1	ENSG00000155629.15	transcript	ENST00000339364.10	protein_coding	8/16			chr10	TogoVar
PIK3AP1_chr10_96588315_96725514	96641086	CGTGTGTG others(5): Show CGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG01169.hp2 HG01169.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0005	1	256	0.0039	-12	c.137 others(31): Show c.1375+4375_1375+4386delACACACACACAC	PIK3AP1	ENSG00000155629.15	transcript	ENST00000339364.10	protein_coding	8/16			chr10	TogoVar
PIK3AP1_chr10_96588315_96725514	96677578	TACACACA others(5): Show TACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02486.hp1 HG02976.hp1 others(2): Show HG02109.hp1 HG02486.hp1 HG02976.hp1 HG03195.hp2 HG03225.hp1	a0002 a0002	a0002c0002 a0002c0005 a0002c0008 others(1): Show a0002c0002 a0002c0005 a0002c0008 a0002c0011	a0002c0002t0001 a0002c0005t0002 a0002c0008t0004 others(1): Show a0002c0002t0001 a0002c0005t0002 a0002c0008t0004 a0002c0011t0001	a0002c0002t0001g0225 a0002c0005t0002g0081 a0002c0008t0004g0078 others(2): Show a0002c0002t0001g0225 a0002c0005t0002g0081 a0002c0008t0004g0078 a0002c0011t0001g0079 a0002c0011t0001g0083	5	256	0.0195	-12	c.431 others(31): Show c.431-20656_431-20645delGTGTGTGTGTGT	PIK3AP1	ENSG00000155629.15	transcript	ENST00000339364.10	protein_coding	2/16			chr10	TogoVar
PIK3AP1_chr10_96588315_96725514	96698535	TAAACTAA others(5): Show TAAACTAAACTAA	T T	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02145.hp2 HG01884.hp2 HG02145.hp2	a0001 a0001	a0001c0010 a0001c0014 a0001c0010 a0001c0014	a0001c0010t0006 a0001c0014t0004 a0001c0010t0006 a0001c0014t0004	a0001c0010t0006g0247 a0001c0014t0004g0246 a0001c0010t0006g0247 a0001c0014t0004g0246	2	256	0.0078	-12	c.430 others(31): Show c.430+11020_430+11031delTTAGTTTAGTTT	PIK3AP1	ENSG00000155629.15	transcript	ENST00000339364.10	protein_coding	2/16			chr10	TogoVar

Search by Variant

Search

Search Results