regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PSMD3_chr17_39975807_40002959 | 40001511 | AAAATAAA others(5): Show |
A | downstream_gene_variant | MODIFIER | HG01109.hp2 HG02280.hp1 HG02451.hp2 others(8): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0007others(2): Show | a0001c0001t0002a0001c0002t0001a0001c0002t0003others(4): Show | a0001c0001t0002g0090a0001c0002t0001g0043a0001c0002t0001g0171others(8): Show | 11 | 418 | 0.0263 | -12 | c.*39 others(23): Show |
PSMD3 | ENSG00000108344.15 | transcript | ENST00000264639.9 | protein_coding | 3553 | chr17 | TogoVar | ||||||
PSMD3_chr17_39975807_40002959 | 40002421 | CAAAAAAA others(5): Show |
C | downstream_gene_variant | MODIFIER | NA19067.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0025 | 1 | 418 | 0.0024 | -12 | c.*48 others(23): Show |
PSMD3 | ENSG00000108344.15 | transcript | ENST00000264639.9 | protein_coding | 4463 | chr17 | TogoVar | ||||||
PSMD4_chr1_151249734_151272479 | 151253953 | CAAAAAAA others(5): Show |
C | upstream_gene_variant | MODIFIER | HG01884.hp2 HG02056.hp2 HG02258.hp2 others(10): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0007a0001c0001t0001g0019a0001c0001t0001g0025others(9): Show | 13 | 420 | 0.0310 | -12 | c.-82 others(21): Show |
PSMD4 | ENSG00000159352.16 | transcript | ENST00000368884.8 | protein_coding | 780 | chr1 | TogoVar | ||||||
PSMD7_chr16_74291814_74311288 | 74300937 | TGCTGGGC others(5): Show |
T | intron_variant | MODIFIER | NA18962.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0054 | 1 | 448 | 0.0022 | -12 | c.167 others(27): Show |
PSMD7 | ENSG00000103035.11 | transcript | ENST00000219313.9 | protein_coding | 2/6 | chr16 | TogoVar | ||||||
PSMD9_chr12_121883790_121923297 | 121904639 | TTTATTAT others(5): Show |
T | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(116): Show |
a0001a0002a0008 | a0001c0001a0002c0002a0008c0008 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(4): Show | a0001c0001t0001g0028a0001c0001t0001g0258a0001c0001t0001g0280others(94): Show | 119 | 398 | 0.2990 | -12 | c.555 others(29): Show |
PSMD9 | ENSG00000110801.14 | transcript | ENST00000541212.6 | protein_coding | 4/5 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
PSMD9_chr12_121883790_121923297 | 121912006 | CTTATTTA others(5): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(104): Show |
a0001a0002a0008 | a0001c0001a0002c0002a0008c0008 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(5): Show | a0001c0001t0001g0008a0001c0001t0001g0028a0001c0001t0001g0221others(81): Show | 107 | 398 | 0.2688 | -12 | c.556 others(29): Show |
PSMD9 | ENSG00000110801.14 | transcript | ENST00000541212.6 | protein_coding | 4/5 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
PSME4_chr2_53859069_53975993 | 53923913 | CAAAAAAA others(5): Show |
C | intron_variant | MODIFIER | HG02559.hp2 HG02965.hp2 HG03098.hp1 others(4): Show |
a0001a0010a0012 | a0001c0007a0010c0026a0012c0024 | a0001c0007t0001a0001c0007t0006a0010c0026t0001others(1): Show | a0001c0007t0001g0361a0001c0007t0006g0012a0001c0007t0006g0014others(4): Show | 7 | 384 | 0.0182 | -12 | c.181 others(29): Show |
PSME4 | ENSG00000068878.15 | transcript | ENST00000404125.6 | protein_coding | 14/46 | chr2 | TogoVar | ||||||
PSME4_chr2_53859069_53975993 | 53933375 | CAAAAAAA others(5): Show |
C | intron_variant | MODIFIER | HG03098.hp1 | a0010 | a0010c0026 | a0010c0026t0001 | a0010c0026t0001g0013 | 1 | 384 | 0.0026 | -12 | c.958 others(27): Show |
PSME4 | ENSG00000068878.15 | transcript | ENST00000404125.6 | protein_coding | 8/46 | chr2 | TogoVar | ||||||
PSME4_chr2_53859069_53975993 | 53967649 | CAAAAAAA others(5): Show |
C | intron_variant | MODIFIER | HG03516.hp2 | a0001 | a0001c0009 | a0001c0009t0001 | a0001c0009t0001g0360 | 1 | 384 | 0.0026 | -12 | c.242 others(29): Show |
PSME4 | ENSG00000068878.15 | transcript | ENST00000404125.6 | protein_coding | 1/46 | chr2 | TogoVar | ||||||
PSME4_chr2_53859069_53975993 | 53973853 | ATATGTGT others(5): Show |
A | upstream_gene_variant | MODIFIER | NA20300.hp2 | a0001 | a0001c0009 | a0001c0009t0013 | a0001c0009t0013g0292 | 1 | 384 | 0.0026 | -12 | c.-30 others(23): Show |
PSME4 | ENSG00000068878.15 | transcript | ENST00000404125.6 | protein_coding | 2861 | chr2 | TogoVar | ||||||
PSME4_chr2_53859069_53975993 | 53973855 | ATGTGTGT others(5): Show |
A | upstream_gene_variant | MODIFIER | HG02257.hp2 HG02280.hp2 HG02717.hp1 others(4): Show |
a0001 | a0001c0006a0001c0009 | a0001c0006t0003a0001c0009t0001 | a0001c0006t0003g0155a0001c0006t0003g0168a0001c0006t0003g0172others(4): Show | 7 | 384 | 0.0182 | -12 | c.-30 others(23): Show |
PSME4 | ENSG00000068878.15 | transcript | ENST00000404125.6 | protein_coding | 2863 | chr2 | TogoVar | ||||||
PSMF1_chr20_1113602_1177246 | 1147167 | TCATCATC others(5): Show |
T | intron_variant | MODIFIER | HG02055.hp2 NA21309.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0052 | a0001c0001t0001g0146a0001c0001t0052g0145 | 2 | 326 | 0.0061 | -12 | c.551 others(31): Show |
PSMF1 | ENSG00000125818.18 | transcript | ENST00000335877.11 | protein_coding | 4/6 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
PSPC1_chr13_19697500_19787945 | 19728439 | AACACACA others(5): Show |
A | intron_variant | MODIFIER | HG02647.hp2 NA21309.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0007 | a0001c0001t0001g0141a0001c0001t0007g0255 | 2 | 258 | 0.0078 | -12 | c.115 others(31): Show |
PSPC1 | ENSG00000121390.19 | transcript | ENST00000338910.9 | protein_coding | 6/8 | chr13 | TogoVar | ||||||
PSPC1_chr13_19697500_19787945 | 19730953 | AAAACAAA others(5): Show |
A | intron_variant | MODIFIER | HG00735.hp1 HG01099.hp1 HG02559.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0140a0001c0001t0001g0142a0001c0001t0002g0044others(3): Show | 6 | 258 | 0.0233 | -12 | c.105 others(29): Show |
PSPC1 | ENSG00000121390.19 | transcript | ENST00000338910.9 | protein_coding | 5/8 | chr13 | TogoVar | ||||||
PSPC1_chr13_19697500_19787945 | 19778362 | TCTCCCCC others(5): Show |
T | intron_variant | MODIFIER | HG01109.hp1 HG01167.hp1 HG01169.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0124a0001c0001t0001g0125a0001c0001t0001g0126others(3): Show | 6 | 258 | 0.0233 | -12 | c.372 others(29): Show |
PSPC1 | ENSG00000121390.19 | transcript | ENST00000338910.9 | protein_coding | 1/8 | chr13 | TogoVar | ||||||
PSPC1_chr13_19697500_19787945 | 19787041 | CAAATAAA others(5): Show |
C | upstream_gene_variant | MODIFIER | HG00735.hp1 HG02559.hp1 HG02647.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0039a0001c0001t0002g0044a0001c0001t0002g0045others(3): Show | 6 | 258 | 0.0233 | -12 | c.-42 others(23): Show |
PSPC1 | ENSG00000121390.19 | transcript | ENST00000338910.9 | protein_coding | 4097 | chr13 | TogoVar | ||||||
PSTPIP2_chr18_45978536_46077260 | 46027297 | AAAATAAA others(5): Show |
A | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(98): Show |
a0001a0002 | a0001c0001a0002c0002a0002c0003others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0007others(7): Show | a0001c0001t0001g0003a0001c0001t0001g0015a0001c0001t0001g0016others(96): Show | 101 | 316 | 0.3196 | -12 | c.135 others(29): Show |
PSTPIP2 | ENSG00000152229.18 | transcript | ENST00000409746.5 | protein_coding | 2/14 | chr18 | TogoVar | ||||||
PSTPIP2_chr18_45978536_46077260 | 46049007 | CATGTGTG others(5): Show |
C | intron_variant | MODIFIER | HG02895.hp1 HG03471.hp1 NA20129.hp1 |
a0002 | a0002c0002a0002c0003 | a0002c0002t0009a0002c0003t0002a0002c0003t0017 | a0002c0002t0009g0024a0002c0003t0002g0026a0002c0003t0017g0025 | 3 | 316 | 0.0095 | -12 | c.34- others(27): Show |
PSTPIP2 | ENSG00000152229.18 | transcript | ENST00000409746.5 | protein_coding | 1/14 | chr18 | TogoVar | ||||||
PSTPIP2_chr18_45978536_46077260 | 46049008 | ATGTGTGT others(5): Show |
A | intron_variant | MODIFIER | HG02572.hp2 HG02615.hp2 HG03486.hp2 others(8): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0007a0002c0002t0002 | a0001c0001t0001g0128a0001c0001t0001g0131a0001c0001t0001g0132others(8): Show | 11 | 316 | 0.0348 | -12 | c.34- others(27): Show |
PSTPIP2 | ENSG00000152229.18 | transcript | ENST00000409746.5 | protein_coding | 1/14 | chr18 | TogoVar | ||||||
PTAR1_chr9_69704525_69765011 | 69730602 | CCCGGCAG others(5): Show |
C | intron_variant | MODIFIER | NA18975.hp2 NA18980.hp2 |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0044 | 2 | 388 | 0.0052 | -12 | c.642 others(29): Show |
PTAR1 | ENSG00000188647.13 | transcript | ENST00000340434.5 | protein_coding | 5/7 | chr9 | TogoVar | ||||||
PTBP2_chr1_96716784_96820049 | 96726074 | CAAAAAAA others(5): Show |
C | intron_variant | MODIFIER | HG00423.hp2 HG00544.hp2 HG01358.hp2 others(33): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0007others(4): Show | a0001c0001t0001g0218a0001c0001t0002g0157a0001c0001t0002g0158others(33): Show | 36 | 364 | 0.0989 | -12 | c.39+ others(27): Show |
PTBP2 | ENSG00000117569.20 | transcript | ENST00000674951.1 | protein_coding | 2/13 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
PTBP2_chr1_96716784_96820049 | 96746871 | GTCCCTCC others(5): Show |
G | intron_variant | MODIFIER | HG00639.hp1 HG00741.hp1 HG01978.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0004a0001c0001t0006 | a0001c0001t0003g0038a0001c0001t0003g0082a0001c0001t0004g0041others(2): Show | 5 | 364 | 0.0137 | -12 | c.40- others(27): Show |
PTBP2 | ENSG00000117569.20 | transcript | ENST00000674951.1 | protein_coding | 2/13 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
PTBP2_chr1_96716784_96820049 | 96746909 | CCCTCCCT others(5): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp2 HG00423.hp2 others(85): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0162a0001c0001t0001g0218a0001c0001t0002g0017others(85): Show | 88 | 364 | 0.2418 | -12 | c.40- others(27): Show |
PTBP2 | ENSG00000117569.20 | transcript | ENST00000674951.1 | protein_coding | 2/13 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
PTBP2_chr1_96716784_96820049 | 96761346 | ATGTGTGT others(5): Show |
A | intron_variant | MODIFIER | HG03209.hp2 NA19240.hp1 |
a0001 | a0001c0002 | a0001c0002t0005 | a0001c0002t0005g0002 | 2 | 364 | 0.0055 | -12 | c.116 others(29): Show |
PTBP2 | ENSG00000117569.20 | transcript | ENST00000674951.1 | protein_coding | 3/13 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
PTBP2_chr1_96716784_96820049 | 96791587 | GAGGGGTT others(5): Show |
G | intron_variant | MODIFIER | HG03834.hp2 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0085 | 1 | 364 | 0.0028 | -12 | c.904 others(29): Show |
PTBP2 | ENSG00000117569.20 | transcript | ENST00000674951.1 | protein_coding | 8/13 | chr1 | TogoVar | ||||||
PTBP3_chr9_112213435_112338619 | 112233272 | GGTGTGTG others(5): Show |
G | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(28): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0006a0001c0001t0008others(4): Show | a0001c0001t0001g0097a0001c0001t0001g0104a0001c0001t0001g0116others(28): Show | 31 | 342 | 0.0906 | -12 | c.881 others(29): Show |
PTBP3 | ENSG00000119314.16 | transcript | ENST00000374257.6 | protein_coding | 8/13 | chr9 | TogoVar | ||||||
PTBP3_chr9_112213435_112338619 | 112239823 | AAGGGAGG others(5): Show |
A | intron_variant | MODIFIER | HG02559.hp2 | a0001 | a0001c0001 | a0001c0001t0009 | a0001c0001t0009g0291 | 1 | 342 | 0.0029 | -12 | c.803 others(29): Show |
PTBP3 | ENSG00000119314.16 | transcript | ENST00000374257.6 | protein_coding | 7/13 | chr9 | TogoVar | ||||||
PTBP3_chr9_112213435_112338619 | 112239831 | AAGGGAGG others(5): Show |
A | intron_variant | MODIFIER | HG00597.hp2 HG00609.hp2 HG00733.hp2 others(96): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(11): Show | a0001c0001t0001g0204a0001c0001t0001g0211a0001c0001t0001g0249others(96): Show | 99 | 342 | 0.2895 | -12 | c.803 others(29): Show |
PTBP3 | ENSG00000119314.16 | transcript | ENST00000374257.6 | protein_coding | 7/13 | chr9 | TogoVar | ||||||
PTBP3_chr9_112213435_112338619 | 112247268 | TAATAAAT others(5): Show |
T | intron_variant | MODIFIER | HG00673.hp1 HG01109.hp1 HG01175.hp1 others(25): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0010others(6): Show | a0001c0001t0001g0109a0001c0001t0001g0189a0001c0001t0001g0244others(25): Show | 28 | 342 | 0.0819 | -12 | c.802 others(29): Show |
PTBP3 | ENSG00000119314.16 | transcript | ENST00000374257.6 | protein_coding | 7/13 | chr9 | TogoVar | ||||||
PTBP3_chr9_112213435_112338619 | 112271746 | AAAAAAGA others(5): Show |
A | intron_variant | MODIFIER | HG02976.hp1 | a0001 | a0001c0007 | a0001c0007t0001 | a0001c0007t0001g0239 | 1 | 342 | 0.0029 | -12 | c.205 others(29): Show |
PTBP3 | ENSG00000119314.16 | transcript | ENST00000374257.6 | protein_coding | 3/13 | chr9 | TogoVar | ||||||
PTBP3_chr9_112213435_112338619 | 112290705 | TATACACA others(5): Show |
T | intron_variant | MODIFIER | HG02074.hp1 HG03831.hp1 NA18978.hp2 |
a0001 | a0001c0002 | a0001c0002t0001a0001c0002t0003 | a0001c0002t0001g0191a0001c0002t0001g0266a0001c0002t0003g0283 | 3 | 342 | 0.0088 | -12 | c.34+ others(27): Show |
PTBP3 | ENSG00000119314.16 | transcript | ENST00000374257.6 | protein_coding | 2/13 | chr9 | TogoVar | ||||||
PTBP3_chr9_112213435_112338619 | 112331082 | AACACACA others(5): Show |
A | intron_variant | MODIFIER | HG01175.hp1 | a0001 | a0001c0001 | a0001c0001t0034 | a0001c0001t0034g0319 | 1 | 342 | 0.0029 | -12 | c.-52 others(29): Show |
PTBP3 | ENSG00000119314.16 | transcript | ENST00000374257.6 | protein_coding | 1/13 | chr9 | TogoVar | ||||||
PTCD3_chr2_86101235_86147157 | 86112411 | GTAATCCC others(5): Show |
G | intron_variant | MODIFIER | NA18972.hp2 NA19006.hp2 NA19063.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0152a0001c0001t0002g0153a0001c0001t0002g0154others(1): Show | 4 | 398 | 0.0101 | -12 | c.240 others(29): Show |
PTCD3 | ENSG00000132300.19 | transcript | ENST00000254630.12 | protein_coding | 4/23 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
PTCH1_chr9_95437980_95514266 | 95469321 | ACCTGGTT others(5): Show |
A | intron_variant | MODIFIER | HG00408.hp1 | a0002 | a0002c0001 | a0002c0001t0001 | a0002c0001t0001g0171 | 1 | 284 | 0.0035 | -12 | c.184 others(29): Show |
PTCH1 | ENSG00000185920.19 | transcript | ENST00000331920.11 | protein_coding | 13/23 | chr9 | TogoVar | ||||||
PTCH1_chr9_95437980_95514266 | 95471082 | CAAAAAAA others(5): Show |
C | intron_variant | MODIFIER | HG00597.hp1 HG00738.hp2 HG01074.hp2 others(44): Show |
a0001a0002 | a0001c0002a0001c0003a0002c0017 | a0001c0002t0021a0001c0003t0001a0001c0003t0002others(10): Show | a0001c0002t0021g0233a0001c0003t0001g0001a0001c0003t0001g0028others(42): Show | 47 | 284 | 0.1655 | -12 | c.172 others(31): Show |
PTCH1 | ENSG00000185920.19 | transcript | ENST00000331920.11 | protein_coding | 12/23 | chr9 | TogoVar | ||||||
PTCH1_chr9_95437980_95514266 | 95490520 | GACACACA others(5): Show |
G | intron_variant | MODIFIER | HG01106.hp2 HG01516.hp1 HG01517.hp2 others(3): Show |
a0001a0002 | a0001c0002a0002c0001 | a0001c0002t0001a0002c0001t0001a0002c0001t0003others(1): Show | a0001c0002t0001g0072a0002c0001t0001g0070a0002c0001t0001g0073others(2): Show | 6 | 284 | 0.0211 | -12 | c.395 others(29): Show |
PTCH1 | ENSG00000185920.19 | transcript | ENST00000331920.11 | protein_coding | 2/23 | chr9 | TogoVar | ||||||
PTCH1_chr9_95437980_95521971 | 95469321 | ACCTGGTT others(5): Show |
A | intron_variant | MODIFIER | HG00408.hp1 | a0002 | a0002c0001 | a0002c0001t0001 | a0002c0001t0001g0043 | 1 | 278 | 0.0036 | -12 | c.184 others(29): Show |
PTCH1 | ENSG00000185920.19 | transcript | ENST00000437951.6 | protein_coding | 13/23 | chr9 | TogoVar | ||||||
PTCH1_chr9_95437980_95521971 | 95471082 | CAAAAAAA others(5): Show |
C | intron_variant | MODIFIER | HG00597.hp1 HG00738.hp2 HG01074.hp2 others(43): Show |
a0001a0002 | a0001c0002a0001c0003a0002c0020 | a0001c0002t0003a0001c0003t0001a0001c0003t0003others(10): Show | a0001c0002t0003g0235a0001c0003t0001g0007a0001c0003t0001g0160others(42): Show | 46 | 278 | 0.1655 | -12 | c.172 others(31): Show |
PTCH1 | ENSG00000185920.19 | transcript | ENST00000437951.6 | protein_coding | 12/23 | chr9 | TogoVar | ||||||
PTCH1_chr9_95437980_95521971 | 95490520 | GACACACA others(5): Show |
G | intron_variant | MODIFIER | HG01106.hp2 HG01123.hp2 HG01516.hp1 others(4): Show |
a0001a0002 | a0001c0002a0002c0001 | a0001c0002t0001a0002c0001t0001a0002c0001t0002others(1): Show | a0001c0002t0001g0061a0002c0001t0001g0056a0002c0001t0001g0062others(4): Show | 7 | 278 | 0.0252 | -12 | c.392 others(29): Show |
PTCH1 | ENSG00000185920.19 | transcript | ENST00000437951.6 | protein_coding | 2/23 | chr9 | TogoVar | ||||||
PTCH2_chr1_44816938_44848253 | 44842274 | CTTTTTTT others(5): Show |
C | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00323.hp2 others(156): Show |
a0001a0002a0005others(2): Show | a0001c0001a0001c0002a0001c0003others(14): Show | a0001c0001t0001a0001c0001t0003a0001c0002t0001others(17): Show | a0001c0001t0001g0012a0001c0001t0001g0158a0001c0001t0001g0159others(111): Show | 159 | 370 | 0.4297 | -12 | c.73- others(25): Show |
PTCH2 | ENSG00000117425.14 | transcript | ENST00000372192.4 | protein_coding | 1/21 | chr1 | TogoVar | ||||||
PTCHD1_chrX_23329849_23409374 | 23342266 | CTATATAT others(5): Show |
C | intron_variant | MODIFIER | HG02071.hp1 NA18980.hp1 |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0147 | a0001c0001t0005g0185a0001c0001t0147g0184 | 2 | 297 | 0.0067 | -12 | c.351 others(29): Show |
PTCHD1 | ENSG00000165186.12 | transcript | ENST00000379361.5 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
PTCHD1_chrX_23329849_23409374 | 23342300 | ATATATAT others(5): Show |
A | intron_variant | MODIFIER | HG00438.hp2 | a0001 | a0001c0002 | a0001c0002t0006 | a0001c0002t0006g0173 | 1 | 297 | 0.0034 | -12 | c.351 others(29): Show |
PTCHD1 | ENSG00000165186.12 | transcript | ENST00000379361.5 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
PTCHD1_chrX_23329849_23409374 | 23354496 | AATATATA others(5): Show |
A | intron_variant | MODIFIER | HG02027.hp1 | a0001 | a0001c0002 | a0001c0002t0006 | a0001c0002t0006g0224 | 1 | 297 | 0.0034 | -12 | c.351 others(31): Show |
PTCHD1 | ENSG00000165186.12 | transcript | ENST00000379361.5 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
PTCHD1_chrX_23329849_23409374 | 23364371 | GACACACA others(5): Show |
G | intron_variant | MODIFIER | HG01192.hp1 HG02622.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0164 | a0001c0001t0001g0016a0001c0001t0164g0248 | 2 | 297 | 0.0067 | -12 | c.352 others(31): Show |
PTCHD1 | ENSG00000165186.12 | transcript | ENST00000379361.5 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
PTCHD1_chrX_23329849_23409374 | 23374280 | CAAAAAAA others(5): Show |
C | intron_variant | MODIFIER | HG01070.hp1 HG01243.hp1 HG01884.hp1 others(16): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0008a0001c0001t0010a0001c0001t0026others(13): Show | a0001c0001t0008g0123a0001c0001t0010g0008a0001c0001t0010g0136others(15): Show | 19 | 297 | 0.0640 | -12 | c.352 others(29): Show |
PTCHD1 | ENSG00000165186.12 | transcript | ENST00000379361.5 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
PTCHD1_chrX_23329849_23409374 | 23387609 | CACTCCCG others(5): Show |
C | intron_variant | MODIFIER | NA19062.hp1 | a0001 | a0001c0002 | a0001c0002t0125 | a0001c0002t0125g0292 | 1 | 297 | 0.0034 | -12 | c.101 others(31): Show |
PTCHD1 | ENSG00000165186.12 | transcript | ENST00000379361.5 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
PTCHD1_chrX_23329849_23409374 | 23396988 | TGCTATAA others(5): Show |
T | 3_prime_UTR_variant | MODIFIER | HG01071.hp2 | a0001 | a0001c0001 | a0001c0001t0096 | a0001c0001t0096g0003 | 1 | 297 | 0.0034 | -12 | c.*28 others(23): Show |
PTCHD1 | ENSG00000165186.12 | transcript | ENST00000379361.5 | protein_coding | 3/3 | 2805 | INFO_REALIGN_3_PRIME | chrX | TogoVar | ||||
PTCHD1_chrX_23329849_23409374 | 23405667 | AACACACA others(5): Show |
A | downstream_gene_variant | MODIFIER | HG00408.hp1 HG01167.hp1 HG01346.hp2 others(23): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0002a0001c0001t0005a0001c0001t0007others(20): Show | a0001c0001t0002g0006a0001c0001t0002g0055a0001c0001t0002g0068others(23): Show | 26 | 297 | 0.0875 | -12 | c.*11 others(25): Show |
PTCHD1 | ENSG00000165186.12 | transcript | ENST00000379361.5 | protein_coding | 1294 | chrX | TogoVar | ||||||
PTCHD1_chrX_23329849_23409374 | 23405738 | AGTGTGTG others(5): Show |
A | downstream_gene_variant | MODIFIER | HG00408.hp2 HG02004.hp1 HG02165.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0110a0001c0001t0111a0001c0002t0017 | a0001c0001t0110g0233a0001c0001t0111g0072a0001c0002t0017g0164 | 3 | 297 | 0.0101 | -12 | c.*11 others(25): Show |
PTCHD1 | ENSG00000165186.12 | transcript | ENST00000379361.5 | protein_coding | 1365 | chrX | TogoVar | ||||||
PTCHD4_chr6_47851673_48116197 | 47897940 | CTTTTTTT others(5): Show |
C | intron_variant | MODIFIER | HG03942.hp2 | a0001 | a0001c0003 | a0001c0003t0023 | a0001c0003t0023g0129 | 1 | 182 | 0.0055 | -12 | c.899 others(31): Show |
PTCHD4 | ENSG00000244694.8 | transcript | ENST00000339488.9 | protein_coding | 4/4 | chr6 | TogoVar |