view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SMYD3_chr1_245744347_246512279 | 246225321 | CAAAAAAA others(5): Show |
C | intron_variant | MODIFIER | HG01433.hp2 HG02145.hp1 |
a0001 | a0001c0006 | a0001c0006t0001a0001c0006t0003 | a0001c0006t0001g0025 a0001c0006t0003g0001 |
2 | 150 | 0.0133 | -12 | c.531 others(33): Show |
SMYD3 | ENSG00000185420.19 | transcript | ENST00000490107.6 | protein_coding | 5/11 | chr1 | TogoVar | |||||||
SMYD3_chr1_245744347_246512279 | 246255927 | AAGATAGA others(5): Show |
A | intron_variant | MODIFIER | HG01175.hp2 HG01981.hp2 HG02109.hp1 others(2): Show |
a0001 | a0001c0001a0001c0002a0001c0009 | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(1): Show | a0001c0001t0001g0047 a0001c0001t0002g0017 a0001c0001t0002g0023 others(2): Show |
5 | 150 | 0.0333 | -12 | c.531 others(31): Show |
SMYD3 | ENSG00000185420.19 | transcript | ENST00000490107.6 | protein_coding | 5/11 | chr1 | TogoVar | |||||||
SMYD3_chr1_245744347_246512279 | 246256009 | CATAGATA others(5): Show |
C | intron_variant | MODIFIER | HG03098.hp2 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0024 | 1 | 150 | 0.0067 | -12 | c.531 others(31): Show |
SMYD3 | ENSG00000185420.19 | transcript | ENST00000490107.6 | protein_coding | 5/11 | chr1 | TogoVar | |||||||
SMYD3_chr1_245744347_246512279 | 246282305 | CAAAAAAA others(5): Show |
C | intron_variant | MODIFIER | HG00140.hp1 HG00597.hp1 HG00738.hp1 others(13): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0002t0001others(3): Show | a0001c0001t0001g0005 a0001c0001t0001g0038 a0001c0001t0001g0093 others(13): Show |
16 | 150 | 0.1067 | -12 | c.531 others(31): Show |
SMYD3 | ENSG00000185420.19 | transcript | ENST00000490107.6 | protein_coding | 5/11 | chr1 | TogoVar | |||||||
SMYD3_chr1_245744347_246512279 | 246391396 | GAGAGAGA others(5): Show |
G | intron_variant | MODIFIER | NA19086.hp1 | a0002 | a0002c0004 | a0002c0004t0001 | a0002c0004t0001g0098 | 1 | 150 | 0.0067 | -12 | c.165 others(31): Show |
SMYD3 | ENSG00000185420.19 | transcript | ENST00000490107.6 | protein_coding | 1/11 | chr1 | TogoVar | |||||||
SMYD4_chr17_1774485_1834902 | 1791116 | CAAAAAAA others(5): Show |
C | intron_variant | MODIFIER | HG00438.hp2 HG00558.hp1 HG00738.hp2 others(54): Show |
a0006a0008a0009others(4): Show | a0006c0005a0008c0008a0008c0028others(5): Show | a0006c0005t0005a0006c0005t0006a0006c0005t0013others(13): Show | a0006c0005t0005g0005 a0006c0005t0005g0084 a0006c0005t0005g0085 others(50): Show |
57 | 390 | 0.1462 | -12 | c.153 others(31): Show |
SMYD4 | ENSG00000186532.12 | transcript | ENST00000305513.12 | protein_coding | 5/10 | chr17 | TogoVar | |||||||
SMYD4_chr17_1774485_1834902 | 1795405 | CTCTATCT others(5): Show |
C | intron_variant | MODIFIER | HG00280.hp1 HG00438.hp2 HG00558.hp1 others(103): Show |
a0003a0006a0008others(11): Show | a0003c0003a0006c0005a0008c0008others(12): Show | a0003c0003t0004a0003c0003t0026a0003c0003t0031others(27): Show | a0003c0003t0004g0003 a0003c0003t0004g0024 a0003c0003t0004g0027 others(97): Show |
106 | 390 | 0.2718 | -12 | c.153 others(31): Show |
SMYD4 | ENSG00000186532.12 | transcript | ENST00000305513.12 | protein_coding | 5/10 | chr17 | TogoVar | |||||||
SNAI1_chr20_49977980_49993886 | 49978472 | CATATATA others(5): Show |
C | upstream_gene_variant | MODIFIER | HG01081.hp2 HG03486.hp1 HG03834.hp2 others(1): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0003c0003t0007 | a0001c0001t0001g0001 a0003c0003t0007g0005 |
4 | 440 | 0.0091 | -12 | c.-45 others(23): Show |
SNAI1 | ENSG00000124216.4 | transcript | ENST00000244050.3 | protein_coding | 4507 | chr20 | TogoVar | |||||||
SNAI1_chr20_49977980_49993886 | 49991714 | CAAAAAAA others(5): Show |
C | downstream_gene_variant | MODIFIER | NA19240.hp1 | a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0008 | 1 | 440 | 0.0023 | -12 | c.*36 others(23): Show |
SNAI1 | ENSG00000124216.4 | transcript | ENST00000244050.3 | protein_coding | 2829 | chr20 | TogoVar | |||||||
SNAI3_chr16_88672688_88691507 | 88682762 | ATTTTTTT others(5): Show |
A | intron_variant | MODIFIER | HG00140.hp1 HG00323.hp1 HG01106.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0017 a0001c0001t0002g0038 a0001c0001t0002g0110 |
6 | 400 | 0.0150 | -12 | c.77- others(27): Show |
SNAI3 | ENSG00000185669.6 | transcript | ENST00000332281.6 | protein_coding | 1/2 | chr16 | TogoVar | |||||||
SNAP23_chr15_42490634_42538058 | 42522716 | TAAAAAAA others(5): Show |
T | intron_variant | MODIFIER | HG03834.hp2 NA20752.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0153 a0001c0001t0001g0179 |
2 | 308 | 0.0065 | -12 | c.267 others(29): Show |
SNAP23 | ENSG00000092531.10 | transcript | ENST00000249647.8 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
SNAP23_chr15_42490634_42538058 | 42530116 | TTTTATTT others(5): Show |
T | intron_variant | MODIFIER | HG01928.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0052 | 1 | 308 | 0.0033 | -12 | c.570 others(27): Show |
SNAP23 | ENSG00000092531.10 | transcript | ENST00000249647.8 | protein_coding | 7/7 | chr15 | TogoVar | |||||||
SNAP25_chr20_10213830_10312418 | 10217311 | ATGTGTGT others(5): Show |
A | upstream_gene_variant | MODIFIER | HG01168.hp1 HG01169.hp2 |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0149 a0001c0001t0003g0150 |
2 | 340 | 0.0059 | -12 | c.-17 others(23): Show |
SNAP25 | ENSG00000132639.15 | transcript | ENST00000254976.7 | protein_coding | 1518 | chr20 | TogoVar | |||||||
SNAP25_chr20_10213830_10312418 | 10224257 | CTTTTTTT others(5): Show |
C | intron_variant | MODIFIER | HG01496.hp2 HG01934.hp1 HG02300.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003 | a0001c0001t0001g0029 a0001c0001t0002g0027 a0001c0001t0003g0026 others(1): Show |
4 | 340 | 0.0118 | -12 | c.-64 others(29): Show |
SNAP25 | ENSG00000132639.15 | transcript | ENST00000254976.7 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
SNAP25_chr20_10213830_10312418 | 10260688 | TACACACA others(5): Show |
T | intron_variant | MODIFIER | HG01928.hp1 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0148 | 1 | 340 | 0.0029 | -12 | c.-63 others(31): Show |
SNAP25 | ENSG00000132639.15 | transcript | ENST00000254976.7 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
SNAP25_chr20_10213830_10312418 | 10275069 | TTAAATAA others(5): Show |
T | intron_variant | MODIFIER | HG01168.hp2 HG01884.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0171 a0001c0001t0001g0238 |
2 | 340 | 0.0059 | -12 | c.-63 others(27): Show |
SNAP25 | ENSG00000132639.15 | transcript | ENST00000254976.7 | protein_coding | 1/7 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
SNAP25_chr20_10213830_10312418 | 10282150 | AGGAAGGA others(5): Show |
A | intron_variant | MODIFIER | HG00544.hp2 HG00735.hp1 HG01070.hp1 others(21): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(4): Show | a0001c0001t0001g0030 a0001c0001t0003g0026 a0001c0001t0003g0076 others(21): Show |
24 | 340 | 0.0706 | -12 | c.115 others(29): Show |
SNAP25 | ENSG00000132639.15 | transcript | ENST00000254976.7 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
SNAP25_chr20_10213830_10312418 | 10282162 | TGGAAGGA others(5): Show |
T | intron_variant | MODIFIER | HG00140.hp2 HG00544.hp1 HG00558.hp1 others(16): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003 | a0001c0001t0001g0012 a0001c0001t0001g0061 a0001c0001t0001g0067 others(16): Show |
19 | 340 | 0.0559 | -12 | c.115 others(29): Show |
SNAP25 | ENSG00000132639.15 | transcript | ENST00000254976.7 | protein_coding | 3/7 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
SNAP25_chr20_10213830_10312418 | 10308422 | CTTTTTTT others(5): Show |
C | downstream_gene_variant | MODIFIER | NA18952.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0188 | 1 | 340 | 0.0029 | -12 | c.*22 others(23): Show |
SNAP25 | ENSG00000132639.15 | transcript | ENST00000254976.7 | protein_coding | 1005 | chr20 | TogoVar | |||||||
SNAP29_chr22_20854007_20896214 | 20872820 | CTTTTTTT others(5): Show |
C | intron_variant | MODIFIER | HG02258.hp2 HG02647.hp1 HG02886.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0034a0001c0001t0064a0001c0001t0068 | a0001c0001t0034g0257 a0001c0001t0034g0258 a0001c0001t0064g0020 others(1): Show |
4 | 382 | 0.0105 | -12 | c.434 others(29): Show |
SNAP29 | ENSG00000099940.12 | transcript | ENST00000215730.12 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||||||
SNAP29_chr22_20854007_20896214 | 20874349 | CCACACAC others(5): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00423.hp2 HG00609.hp2 others(44): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0002c0003others(1): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0010others(16): Show | a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0039 others(40): Show |
47 | 382 | 0.1230 | -12 | c.434 others(29): Show |
SNAP29 | ENSG00000099940.12 | transcript | ENST00000215730.12 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||||||
SNAP29_chr22_20854007_20896214 | 20888345 | ACACACAC others(5): Show |
A | 3_prime_UTR_variant | MODIFIER | HG02970.hp1 | a0001 | a0001c0001 | a0001c0001t0046 | a0001c0001t0046g0162 | 1 | 382 | 0.0026 | -12 | c.*51 others(21): Show |
SNAP29 | ENSG00000099940.12 | transcript | ENST00000215730.12 | protein_coding | 5/5 | 511 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | |||||
SNAP29_chr22_20854007_20896214 | 20891314 | ATTTTTTT others(5): Show |
A | downstream_gene_variant | MODIFIER | HG02129.hp1 NA18942.hp1 NA18943.hp1 others(8): Show |
a0001 | a0001c0002 | a0001c0002t0008a0001c0002t0009a0001c0002t0017others(2): Show | a0001c0002t0008g0009 a0001c0002t0008g0021 a0001c0002t0008g0192 others(8): Show |
11 | 382 | 0.0288 | -12 | c.*34 others(23): Show |
SNAP29 | ENSG00000099940.12 | transcript | ENST00000215730.12 | protein_coding | 101 | chr22 | TogoVar | |||||||
SNAP29_chr22_20854007_20896214 | 20893847 | CTTTATTT others(5): Show |
C | downstream_gene_variant | MODIFIER | HG02615.hp2 HG03041.hp2 NA18965.hp2 others(2): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0040a0001c0002t0002a0001c0002t0008 | a0001c0001t0040g0207 a0001c0001t0040g0208 a0001c0002t0002g0293 others(2): Show |
5 | 382 | 0.0131 | -12 | c.*60 others(23): Show |
SNAP29 | ENSG00000099940.12 | transcript | ENST00000215730.12 | protein_coding | 2634 | chr22 | TogoVar | |||||||
SNAP47_chr1_227730435_227786226 | 227736502 | GTTTTTTT others(5): Show |
G | intron_variant | MODIFIER | NA21309.hp2 | a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0068 | 1 | 396 | 0.0025 | -12 | c.-46 others(29): Show |
SNAP47 | ENSG00000143740.15 | transcript | ENST00000617596.5 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SNAP47_chr1_227730435_227786226 | 227751744 | GTTTTTTT others(5): Show |
G | intron_variant | MODIFIER | HG00140.hp1 HG00642.hp2 HG01516.hp2 others(23): Show |
a0002a0004a0006 | a0002c0002a0004c0004a0006c0007 | a0002c0002t0001a0004c0004t0001a0006c0007t0001 | a0002c0002t0001g0066 a0002c0002t0001g0067 a0002c0002t0001g0168 others(17): Show |
26 | 396 | 0.0657 | -12 | c.497 others(29): Show |
SNAP47 | ENSG00000143740.15 | transcript | ENST00000617596.5 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
SNAP91_chr6_83547885_83714101 | 83556340 | GGGGAGAG others(5): Show |
G | intron_variant | MODIFIER | HG03471.hp1 | a0001 | a0001c0001 | a0001c0001t0017 | a0001c0001t0017g0365 | 1 | 366 | 0.0027 | -12 | c.263 others(28): Show |
SNAP91 | ENSG00000065609.15 | transcript | ENST00000369694.7 | protein_coding | 28/29 | chr6 | TogoVar | |||||||
SNAP91_chr6_83547885_83714101 | 83556342 | GGAGAGAG others(5): Show |
G | intron_variant | MODIFIER | HG01433.hp1 | a0001 | a0001c0003 | a0001c0003t0001 | a0001c0003t0001g0082 | 1 | 366 | 0.0027 | -12 | c.263 others(28): Show |
SNAP91 | ENSG00000065609.15 | transcript | ENST00000369694.7 | protein_coding | 28/29 | chr6 | TogoVar | |||||||
SNAP91_chr6_83547885_83714101 | 83568476 | TATAATAA others(5): Show |
T | intron_variant | MODIFIER | HG00741.hp2 HG02572.hp1 HG02615.hp2 others(7): Show |
a0001 | a0001c0001a0001c0011 | a0001c0001t0001a0001c0011t0001 | a0001c0001t0001g0036 a0001c0001t0001g0086 a0001c0001t0001g0225 others(7): Show |
10 | 366 | 0.0273 | -12 | c.244 others(31): Show |
SNAP91 | ENSG00000065609.15 | transcript | ENST00000369694.7 | protein_coding | 26/29 | chr6 | TogoVar | |||||||
SNAP91_chr6_83547885_83714101 | 83577364 | CAAAATTT others(5): Show |
C | intron_variant | MODIFIER | HG03017.hp1 HG03239.hp2 |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0212 a0001c0002t0001g0293 |
2 | 366 | 0.0055 | -12 | c.230 others(31): Show |
SNAP91 | ENSG00000065609.15 | transcript | ENST00000369694.7 | protein_coding | 24/29 | chr6 | TogoVar | |||||||
SNAP91_chr6_83547885_83714101 | 83610736 | TATATATA others(5): Show |
T | intron_variant | MODIFIER | HG00735.hp1 HG01934.hp1 HG02145.hp1 others(11): Show |
a0001 | a0001c0001a0001c0002a0001c0010 | a0001c0001t0001a0001c0001t0003a0001c0001t0013others(2): Show | a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 others(11): Show |
14 | 366 | 0.0383 | -12 | c.885 others(25): Show |
SNAP91 | ENSG00000065609.15 | transcript | ENST00000369694.7 | protein_coding | 11/29 | chr6 | TogoVar | |||||||
SNAP91_chr6_83547885_83714101 | 83697324 | GCACACAC others(5): Show |
G | intron_variant | MODIFIER | HG02922.hp2 HG03139.hp1 HG03579.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0105 others(1): Show |
4 | 366 | 0.0109 | -12 | c.130 others(31): Show |
SNAP91 | ENSG00000065609.15 | transcript | ENST00000369694.7 | protein_coding | 2/29 | chr6 | TogoVar | |||||||
SNAPC1_chr14_61757420_61801428 | 61763495 | TTTTTTTT others(5): Show |
T | intron_variant | MODIFIER | HG00621.hp1 | a0002 | a0002c0003 | a0002c0003t0008 | a0002c0003t0008g0081 | 1 | 356 | 0.0028 | -12 | c.128 others(27): Show |
SNAPC1 | ENSG00000023608.5 | transcript | ENST00000216294.5 | protein_coding | 1/9 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
SNAPC1_chr14_61757420_61801428 | 61793649 | TTTTCTTT others(5): Show |
T | intron_variant | MODIFIER | HG02109.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0181 | 1 | 356 | 0.0028 | -12 | c.107 others(29): Show |
SNAPC1 | ENSG00000023608.5 | transcript | ENST00000216294.5 | protein_coding | 9/9 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | ||||||
SNAPC2_chr19_7915338_7928250 | 7918219 | TTTTGTTT others(5): Show |
T | upstream_gene_variant | MODIFIER | HG01261.hp2 HG01891.hp1 HG02451.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004 | a0001c0001t0001g0003 a0001c0001t0004g0003 |
4 | 430 | 0.0093 | -12 | c.-21 others(23): Show |
SNAPC2 | ENSG00000104976.13 | transcript | ENST00000221573.11 | protein_coding | 2118 | chr19 | TogoVar | |||||||
SNAPC3_chr9_15417876_15466626 | 15449559 | ATATATTT others(5): Show |
A | intron_variant | MODIFIER | HG02615.hp1 HG02818.hp2 |
a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0010 | 2 | 308 | 0.0065 | -12 | c.733 others(29): Show |
SNAPC3 | ENSG00000164975.16 | transcript | ENST00000380821.8 | protein_coding | 5/8 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
SNAPC4_chr9_136370571_136405170 | 136390554 | GAAAAAAA others(5): Show |
G | intron_variant | MODIFIER | HG01074.hp2 HG01109.hp2 HG02615.hp2 others(4): Show |
a0003a0006 | a0003c0003a0006c0009 | a0003c0003t0002a0006c0009t0003 | a0003c0003t0002g0218 a0006c0009t0003g0049 a0006c0009t0003g0050 others(2): Show |
7 | 380 | 0.0184 | -12 | c.975 others(29): Show |
SNAPC4 | ENSG00000165684.6 | transcript | ENST00000684778.1 | protein_coding | 10/23 | chr9 | TogoVar | |||||||
SNCAIP_chr5_122307237_122469219 | 122363788 | CTATTTAT others(5): Show |
C | intron_variant | MODIFIER | HG01106.hp1 HG01243.hp1 HG02055.hp1 others(3): Show |
a0001a0004 | a0001c0001a0004c0011 | a0001c0001t0001a0001c0001t0005a0004c0011t0001 | a0001c0001t0001g0017 a0001c0001t0001g0083 a0001c0001t0001g0086 others(3): Show |
6 | 222 | 0.0270 | -12 | c.-46 others(31): Show |
SNCAIP | ENSG00000064692.20 | transcript | ENST00000261368.13 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SNCAIP_chr5_122307237_122469219 | 122385673 | ATGTGTGT others(5): Show |
A | intron_variant | MODIFIER | HG00408.hp1 HG00621.hp2 HG01123.hp2 others(42): Show |
a0001a0002 | a0001c0001a0001c0006a0002c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(2): Show | a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0015 others(42): Show |
45 | 222 | 0.2027 | -12 | c.-46 others(29): Show |
SNCAIP | ENSG00000064692.20 | transcript | ENST00000261368.13 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SNCAIP_chr5_122307237_122469219 | 122448639 | GTTATATA others(5): Show |
G | intron_variant | MODIFIER | HG01884.hp1 HG02895.hp2 HG02897.hp1 |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0027 a0002c0002t0001g0036 a0002c0002t0001g0074 |
3 | 222 | 0.0135 | -12 | c.159 others(31): Show |
SNCAIP | ENSG00000064692.20 | transcript | ENST00000261368.13 | protein_coding | 8/10 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SNCA_chr4_89719099_89842161 | 89792291 | TTTGTTGT others(5): Show |
T | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00280.hp2 others(115): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(15): Show | a0001c0001t0001g0009 a0001c0001t0001g0019 a0001c0001t0001g0136 others(112): Show |
118 | 338 | 0.3491 | -12 | c.306 others(31): Show |
SNCA | ENSG00000145335.17 | transcript | ENST00000394991.8 | protein_coding | 4/5 | chr4 | TogoVar | |||||||
SNCA_chr4_89719099_89842161 | 89802592 | TTTTCTTT others(5): Show |
T | intron_variant | MODIFIER | HG01243.hp1 HG02280.hp2 |
a0001 | a0001c0001 | a0001c0001t0016 | a0001c0001t0016g0280 a0001c0001t0016g0281 |
2 | 338 | 0.0059 | -12 | c.306 others(31): Show |
SNCA | ENSG00000145335.17 | transcript | ENST00000394991.8 | protein_coding | 4/5 | chr4 | TogoVar | |||||||
SNCA_chr4_89719099_89842161 | 89802741 | TTTTCTTT others(5): Show |
T | intron_variant | MODIFIER | HG00558.hp2 HG00597.hp2 HG00609.hp1 others(61): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0005a0001c0001t0006others(3): Show | a0001c0001t0002g0004 a0001c0001t0002g0005 a0001c0001t0002g0024 others(58): Show |
64 | 338 | 0.1894 | -12 | c.306 others(31): Show |
SNCA | ENSG00000145335.17 | transcript | ENST00000394991.8 | protein_coding | 4/5 | chr4 | TogoVar | |||||||
SNCB_chr5_176615082_176635534 | 176622732 | CTTTTTTT others(5): Show |
C | intron_variant | MODIFIER | HG01884.hp2 | a0001 | a0001c0001 | a0001c0001t0006 | a0001c0001t0006g0102 | 1 | 436 | 0.0023 | -12 | c.283 others(29): Show |
SNCB | ENSG00000074317.11 | transcript | ENST00000393693.7 | protein_coding | 4/5 | chr5 | TogoVar | |||||||
SNCG_chr10_86953599_86968258 | 86967150 | CGTGTGTG others(5): Show |
C | downstream_gene_variant | MODIFIER | HG01981.hp1 HG02273.hp2 HG03579.hp1 others(3): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0002a0002c0002t0002 | a0001c0001t0001g0001 a0001c0001t0002g0003 a0002c0002t0002g0002 |
6 | 400 | 0.0150 | -12 | c.*41 others(23): Show |
SNCG | ENSG00000173267.14 | transcript | ENST00000372017.4 | protein_coding | 3893 | chr10 | TogoVar | |||||||
SND1_chr7_127647194_128097593 | 127705570 | AAGATGTA others(5): Show |
A | intron_variant | MODIFIER | HG01123.hp2 HG01175.hp1 HG02080.hp2 others(18): Show |
a0001 | a0001c0001a0001c0002a0001c0006 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0010 others(18): Show |
21 | 262 | 0.0802 | -12 | c.947 others(27): Show |
SND1 | ENSG00000197157.11 | transcript | ENST00000354725.8 | protein_coding | 8/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SND1_chr7_127647194_128097593 | 127759057 | AATAGATA others(5): Show |
A | intron_variant | MODIFIER | HG00438.hp1 NA18967.hp2 NA19030.hp1 |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0001a0002c0003t0001 | a0001c0001t0001g0258 a0002c0003t0001g0084 a0002c0003t0001g0086 |
3 | 262 | 0.0115 | -12 | c.115 others(33): Show |
SND1 | ENSG00000197157.11 | transcript | ENST00000354725.8 | protein_coding | 10/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SND1_chr7_127647194_128097593 | 127817721 | CTTTTTTT others(5): Show |
C | intron_variant | MODIFIER | NA18906.hp1 | a0001 | a0001c0004 | a0001c0004t0001 | a0001c0004t0001g0095 | 1 | 262 | 0.0038 | -12 | c.124 others(33): Show |
SND1 | ENSG00000197157.11 | transcript | ENST00000354725.8 | protein_coding | 11/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SND1_chr7_127647194_128097593 | 127854538 | CTATTTAT others(5): Show |
C | intron_variant | MODIFIER | HG01109.hp1 HG01123.hp2 HG01243.hp2 others(11): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0066 a0001c0001t0001g0110 a0001c0001t0001g0120 others(11): Show |
14 | 262 | 0.0534 | -12 | c.134 others(33): Show |
SND1 | ENSG00000197157.11 | transcript | ENST00000354725.8 | protein_coding | 12/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
SND1_chr7_127647194_128097593 | 127857183 | CTTTTTTT others(5): Show |
C | intron_variant | MODIFIER | HG03017.hp1 NA19240.hp1 |
a0001 | a0001c0001a0001c0010 | a0001c0001t0001a0001c0010t0003 | a0001c0001t0001g0024 a0001c0010t0003g0030 |
2 | 262 | 0.0076 | -12 | c.134 others(33): Show |
SND1 | ENSG00000197157.11 | transcript | ENST00000354725.8 | protein_coding | 12/23 | INFO_REALIGN_3_PRIME | chr7 | TogoVar |