Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SNTB1_chr8_120530756_120817046	120755165	TGTGTGTG others(5): Show TGTGTGTGAGAGA	T T	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG00673.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0047 a0001c0001t0002g0047	1	254	0.0039	-12	c.571 others(31): Show c.571+56096_571+56107delTCTCTCACACAC	SNTB1	ENSG00000172164.15	transcript	ENST00000517992.2	protein_coding	1/6			chr8	TogoVar
SNTB1_chr8_120530756_120817046	120755167	TGTGTGAG others(5): Show TGTGTGAGAGAGA	T T	intron_variant intron_variant	MODIFIER	HG00621.hp1 HG00621.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0044 a0001c0001t0001g0044	1	254	0.0039	-12	c.571 others(31): Show c.571+56094_571+56105delTCTCTCTCACAC	SNTB1	ENSG00000172164.15	transcript	ENST00000517992.2	protein_coding	1/6			chr8	TogoVar
SNTB1_chr8_120530756_120817046	120775707	CAAGGAAG others(5): Show CAAGGAAGGAAGG	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG01167.hp2 others(18): Show HG00099.hp2 HG00140.hp1 HG01167.hp2 HG01257.hp1 HG01346.hp2 HG01891.hp2 HG02615.hp2 HG02723.hp1 HG02809.hp1 HG02809.hp2 HG02886.hp1 HG02976.hp2 HG03041.hp2 HG03098.hp2 HG03130.hp1 HG03139.hp1 HG03139.hp2 HG03225.hp1 HG03579.hp1 NA18522.hp2 NA20129.hp2	a0001 a0003 a0007 a0001 a0003 a0007	a0001c0001 a0001c0002 a0001c0006 others(4): Show a0001c0001 a0001c0002 a0001c0006 a0001c0007 a0001c0011 a0003c0004 a0007c0012	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(12): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0008 a0001c0001t0011 a0001c0002t0001 a0001c0002t0006 a0001c0006t0001 a0001c0007t0001 a0001c0007t0005 a0001c0011t0005 a0003c0004t0001 a0007c0012t0001	a0001c0001t0001g0025 a0001c0001t0001g0051 a0001c0001t0001g0186 others(18): Show a0001c0001t0001g0025 a0001c0001t0001g0051 a0001c0001t0001g0186 a0001c0001t0001g0209 a0001c0001t0002g0048 a0001c0001t0002g0059 a0001c0001t0004g0052 a0001c0001t0005g0013 a0001c0001t0005g0057 a0001c0001t0006g0024 a0001c0001t0008g0058 a0001c0001t0011g0023 a0001c0002t0001g0241 a0001c0002t0006g0236 a0001c0002t0006g0240 a0001c0006t0001g0056 a0001c0007t0001g0237 a0001c0007t0005g0248 a0001c0011t0005g0234 a0003c0004t0001g0253 a0007c0012t0001g0242	21	254	0.0827	-12	c.571 others(31): Show c.571+35554_571+35565delCCTTCCTTCCTT	SNTB1	ENSG00000172164.15	transcript	ENST00000517992.2	protein_coding	1/6			chr8	TogoVar
SNTB2_chr16_69182164_69314052	69232502	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01243.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0012 a0001c0002t0012	a0001c0002t0012g0206 a0001c0002t0012g0206	1	218	0.0046	-12	c.581 others(31): Show c.581-13084_581-13073delTTTTTTTTTTTT	SNTB2	ENSG00000168807.17	transcript	ENST00000336278.9	protein_coding	1/6		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNTB2_chr16_69182164_69314052	69257414	CTTATTTA others(5): Show CTTATTTATTTAT	C C	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00597.hp1 HG00609.hp1 others(14): Show HG00408.hp1 HG00597.hp1 HG00609.hp1 HG00642.hp1 HG01256.hp2 HG01258.hp1 HG02015.hp1 NA18950.hp1 NA18968.hp1 NA18973.hp2 NA18983.hp2 NA19010.hp1 NA19060.hp1 NA19064.hp1 NA19077.hp1 NA19084.hp1 NA19087.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0001 a0001c0001t0022 a0001c0001t0035 others(1): Show a0001c0001t0001 a0001c0001t0022 a0001c0001t0035 a0003c0004t0001	a0001c0001t0001g0116 a0001c0001t0001g0182 a0001c0001t0001g0183 others(14): Show a0001c0001t0001g0116 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0193 a0001c0001t0001g0200 a0001c0001t0022g0195 a0001c0001t0022g0196 a0001c0001t0035g0194 a0003c0004t0001g0192	17	218	0.0780	-12	c.795 others(29): Show c.795-2601_795-2590delATTTATTTATTT	SNTB2	ENSG00000168807.17	transcript	ENST00000336278.9	protein_coding	2/6		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNTB2_chr16_69182164_69314052	69278889	AGTGTGTG others(5): Show AGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG02273.hp2 HG02886.hp2 HG02273.hp2 HG02886.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0001 a0001c0001t0006	a0001c0001t0001g0001 a0001c0001t0006g0049 a0001c0001t0001g0001 a0001c0001t0006g0049	2	218	0.0092	-12	c.114 others(31): Show c.1149-5126_1149-5115delGTGTGTGTGTGT	SNTB2	ENSG00000168807.17	transcript	ENST00000336278.9	protein_coding	4/6		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNTB2_chr16_69182164_69314052	69292406	ATTATATA others(5): Show ATTATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01169.hp1 HG01192.hp1 HG02735.hp1 others(3): Show HG01169.hp1 HG01192.hp1 HG02735.hp1 HG02896.hp1 HG02897.hp1 HG03834.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0018 a0001c0002t0029 a0001c0002t0004 a0001c0002t0018 a0001c0002t0029	a0001c0002t0004g0023 a0001c0002t0004g0024 a0001c0002t0004g0038 others(3): Show a0001c0002t0004g0023 a0001c0002t0004g0024 a0001c0002t0004g0038 a0001c0002t0004g0045 a0001c0002t0018g0034 a0001c0002t0029g0012	6	218	0.0275	-12	c.134 others(31): Show c.1346-7182_1346-7171delTATATATATATT	SNTB2	ENSG00000168807.17	transcript	ENST00000336278.9	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNTB2_chr16_69182164_69314052	69297306	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01175.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0111 a0001c0001t0002g0111	1	218	0.0046	-12	c.134 others(31): Show c.1346-2267_1346-2256delAAAAAAAAAAAA	SNTB2	ENSG00000168807.17	transcript	ENST00000336278.9	protein_coding	5/6		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNTB2_chr16_69182164_69314052	69310070	GTTTTTTT others(5): Show GTTTTTTTTTTTT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00738.hp2 HG02055.hp2 HG02145.hp1 others(5): Show HG00738.hp2 HG02055.hp2 HG02145.hp1 HG02615.hp1 HG02818.hp1 HG02965.hp1 HG03453.hp2 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0006 a0001c0001t0016 a0001c0002t0008 others(1): Show a0001c0001t0006 a0001c0001t0016 a0001c0002t0008 a0001c0002t0009	a0001c0001t0006g0059 a0001c0001t0006g0061 a0001c0001t0006g0063 others(5): Show a0001c0001t0006g0059 a0001c0001t0006g0061 a0001c0001t0006g0063 a0001c0001t0016g0051 a0001c0002t0008g0018 a0001c0002t0009g0005 a0001c0002t0009g0006 a0001c0002t0009g0009	8	218	0.0367	-12	c.91 others(23): Show c.9147_*9158delTTTTTTTTTTTT	SNTB2	ENSG00000168807.17	transcript	ENST00000336278.9	protein_coding		1019		chr16	TogoVar
SNTG1_chr8_49906407_50801692	49925444	ATCTGTCT others(5): Show ATCTGTCTGTCTG	A A	intron_variant intron_variant	MODIFIER	HG03041.hp2 HG03516.hp2 HG06807.hp2 HG03041.hp2 HG03516.hp2 HG06807.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0005 a0002c0003 a0001c0001 a0001c0005 a0002c0003	a0001c0001t0020 a0001c0005t0019 a0002c0003t0018 a0001c0001t0020 a0001c0005t0019 a0002c0003t0018	a0001c0001t0020g0043 a0001c0005t0019g0044 a0002c0003t0018g0045 a0001c0001t0020g0043 a0001c0005t0019g0044 a0002c0003t0018g0045	3	106	0.0283	-12	c.-10 others(33): Show c.-103+13232_-103+13243delTGTCTGTCTGTC	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	49934280	GATCTATC others(5): Show GATCTATCTATCT	G G	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG02895.hp1 HG02897.hp2 others(3): Show HG01192.hp2 HG02895.hp1 HG02897.hp2 HG03540.hp2 NA18906.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0006 a0001c0001t0024 a0001c0001t0033 others(2): Show a0001c0001t0006 a0001c0001t0024 a0001c0001t0033 a0001c0002t0001 a0001c0002t0045	a0001c0001t0006g0051 a0001c0001t0006g0066 a0001c0001t0024g0058 others(3): Show a0001c0001t0006g0051 a0001c0001t0006g0066 a0001c0001t0024g0058 a0001c0001t0033g0056 a0001c0002t0001g0059 a0001c0002t0045g0046	6	106	0.0566	-12	c.-10 others(33): Show c.-103+22095_-103+22106delTCTATCTATCTA	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	49951873	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02055.hp1 HG02109.hp2 others(14): Show HG01884.hp2 HG02055.hp1 HG02109.hp2 HG02145.hp2 HG02451.hp2 HG02622.hp1 HG02647.hp2 HG02723.hp1 HG02809.hp1 HG02886.hp2 HG02896.hp1 HG02965.hp2 HG02976.hp2 HG03453.hp2 HG03516.hp2 NA19240.hp1 NA20300.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0003c0004 a0001c0001 a0001c0002 a0003c0004	a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 others(9): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0001t0007 a0001c0001t0010 a0001c0001t0020 a0001c0001t0035 a0001c0001t0037 a0001c0001t0050 a0001c0002t0003 a0001c0002t0010 a0003c0004t0005	a0001c0001t0002g0032 a0001c0001t0002g0033 a0001c0001t0003g0007 others(14): Show a0001c0001t0002g0032 a0001c0001t0002g0033 a0001c0001t0003g0007 a0001c0001t0003g0027 a0001c0001t0005g0035 a0001c0001t0007g0006 a0001c0001t0007g0036 a0001c0001t0007g0037 a0001c0001t0007g0039 a0001c0001t0010g0030 a0001c0001t0020g0043 a0001c0001t0035g0031 a0001c0001t0037g0034 a0001c0001t0050g0038 a0001c0002t0003g0029 a0001c0002t0010g0028 a0003c0004t0005g0040	17	106	0.1604	-12	c.-10 others(33): Show c.-103+39662_-103+39673delAAAAAAAAAAAA	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	49993612	GTGTTCTC others(5): Show GTGTTCTCATTTT	G G	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00621.hp1 HG01071.hp2 others(26): Show HG00280.hp2 HG00621.hp1 HG01071.hp2 HG01243.hp1 HG01978.hp2 HG02109.hp1 HG02145.hp1 HG02300.hp2 HG02647.hp1 HG02698.hp1 HG02886.hp1 HG03017.hp2 HG03225.hp2 HG03453.hp1 HG03490.hp2 HG03491.hp2 HG03669.hp2 HG03942.hp2 HG04115.hp1 NA18906.hp1 NA18944.hp1 NA18944.hp2 NA18952.hp2 NA18968.hp1 NA18992.hp1 NA19060.hp1 NA19060.hp2 NA19085.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(11): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0008 a0001c0001t0009 a0001c0001t0011 a0001c0001t0013 a0001c0001t0017 a0001c0001t0026 a0001c0001t0027 a0001c0001t0028 a0001c0002t0001 a0001c0002t0025 a0001c0002t0029	a0001c0001t0001g0086 a0001c0001t0002g0067 a0001c0001t0004g0072 others(26): Show a0001c0001t0001g0086 a0001c0001t0002g0067 a0001c0001t0004g0072 a0001c0001t0004g0079 a0001c0001t0004g0090 a0001c0001t0004g0094 a0001c0001t0004g0102 a0001c0001t0008g0071 a0001c0001t0008g0091 a0001c0001t0009g0085 a0001c0001t0011g0097 a0001c0001t0011g0099 a0001c0001t0013g0068 a0001c0001t0017g0057 a0001c0001t0026g0095 a0001c0001t0027g0070 a0001c0001t0028g0093 a0001c0002t0001g0077 a0001c0002t0001g0080 a0001c0002t0001g0081 a0001c0002t0001g0082 a0001c0002t0001g0083 a0001c0002t0001g0084 a0001c0002t0001g0087 a0001c0002t0001g0092 a0001c0002t0001g0096 a0001c0002t0001g0098 a0001c0002t0025g0089 a0001c0002t0029g0088	29	106	0.2736	-12	c.-10 others(33): Show c.-103+81383_-103+81394delGTTCTCATTTTT	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	50013464	GAGATAGA others(5): Show GAGATAGATAGAT	G G	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03225.hp1 HG06807.hp2 HG03139.hp2 HG03225.hp1 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 a0001c0001 a0001c0002 a0001c0005	a0001c0001t0030 a0001c0002t0006 a0001c0005t0019 a0001c0001t0030 a0001c0002t0006 a0001c0005t0019	a0001c0001t0030g0053 a0001c0002t0006g0054 a0001c0005t0019g0044 a0001c0001t0030g0053 a0001c0002t0006g0054 a0001c0005t0019g0044	3	106	0.0283	-12	c.-10 others(35): Show c.-103+101265_-103+101276delTAGATAGATAGA	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	50122119	TACAGATA others(5): Show TACAGATACACAC	T T	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0074 a0001c0001t0004g0074	1	106	0.0094	-12	c.-10 others(33): Show c.-102-50438_-102-50427delGATACACACACA	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	50138628	CAATAATA others(5): Show CAATAATAATAAT	C C	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0021 a0001c0002t0021	a0001c0002t0021g0073 a0001c0002t0021g0073	1	106	0.0094	-12	c.-10 others(33): Show c.-102-33902_-102-33891delAATAATAATAAT	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	1/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	50203780	CTGTGTGT others(5): Show CTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG03139.hp1 HG03516.hp2 HG01884.hp1 HG03139.hp1 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0020 a0001c0001t0023 a0001c0001t0046 a0001c0001t0020 a0001c0001t0023 a0001c0001t0046	a0001c0001t0020g0043 a0001c0001t0023g0002 a0001c0001t0046g0104 a0001c0001t0020g0043 a0001c0001t0023g0002 a0001c0001t0046g0104	3	106	0.0283	-12	c.-28 others(31): Show c.-28+31151_-28+31162delGTGTGTGTGTGT	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	2/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	50221512	TACACACA others(5): Show TACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0074 a0001c0001t0004g0074	1	106	0.0094	-12	c.-28 others(31): Show c.-28+48905_-28+48916delCACACACACACA	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	2/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	50260510	AACACACA others(5): Show AACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG03098.hp2 HG02622.hp2 HG03098.hp2	a0001 a0002 a0001 a0002	a0001c0002 a0002c0003 a0001c0002 a0002c0003	a0001c0002t0044 a0002c0003t0043 a0001c0002t0044 a0002c0003t0043	a0001c0002t0044g0047 a0002c0003t0043g0050 a0001c0002t0044g0047 a0002c0003t0043g0050	2	106	0.0189	-12	c.-28 others(31): Show c.-28+87881_-28+87892delCACACACACACA	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	2/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	50276373	TTATATAT others(5): Show TTATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG02976.hp1 HG03209.hp2 HG01167.hp2 HG02976.hp1 HG03209.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0014 a0001c0002t0034 a0001c0002t0014 a0001c0002t0034	a0001c0002t0014g0014 a0001c0002t0014g0076 a0001c0002t0034g0062 a0001c0002t0014g0014 a0001c0002t0014g0076 a0001c0002t0034g0062	3	106	0.0283	-12	c.-28 others(33): Show c.-28+103763_-28+103774delTATATATATATA	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	2/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	50376748	TATATATA others(5): Show TATATATATAGAG	T T	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0044 a0001c0002t0044	a0001c0002t0044g0047 a0001c0002t0044g0047	1	106	0.0094	-12	c.-27 others(31): Show c.-27-17462_-27-17451delTATATATAGAGA	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	2/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	50461156	GGTGTGTG others(5): Show GGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02647.hp2 HG02809.hp1 others(3): Show HG02109.hp2 HG02647.hp2 HG02809.hp1 HG02895.hp2 HG02965.hp2 NA19240.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0004 a0001c0001 a0003c0004	a0001c0001t0007 a0001c0001t0015 a0001c0001t0042 others(1): Show a0001c0001t0007 a0001c0001t0015 a0001c0001t0042 a0003c0004t0005	a0001c0001t0007g0036 a0001c0001t0007g0037 a0001c0001t0007g0039 others(3): Show a0001c0001t0007g0036 a0001c0001t0007g0037 a0001c0001t0007g0039 a0001c0001t0015g0001 a0001c0001t0042g0048 a0003c0004t0005g0040	6	106	0.0566	-12	c.363 others(31): Show c.363+10465_363+10476delTGTGTGTGTGTG	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	8/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	50462794	CTCTTTTT others(5): Show CTCTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02698.hp2 HG02886.hp2 others(2): Show HG01243.hp2 HG02698.hp2 HG02886.hp2 HG04115.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0004 a0001c0001t0007 a0001c0001t0016 others(2): Show a0001c0001t0004 a0001c0001t0007 a0001c0001t0016 a0001c0001t0037 a0001c0002t0036	a0001c0001t0004g0090 a0001c0001t0007g0006 a0001c0001t0016g0003 others(2): Show a0001c0001t0004g0090 a0001c0001t0007g0006 a0001c0001t0016g0003 a0001c0001t0037g0034 a0001c0002t0036g0016	5	106	0.0472	-12	c.363 others(31): Show c.363+12067_363+12078delCTTTTTTTTTTT	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	8/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	50484149	TTTCCTTC others(5): Show TTTCCTTCCTTCC	T T	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02647.hp1 HG03225.hp2 HG02622.hp1 HG02647.hp1 HG03225.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0011 a0001c0002t0010 a0001c0001t0011 a0001c0002t0010	a0001c0001t0011g0097 a0001c0001t0011g0099 a0001c0002t0010g0028 a0001c0001t0011g0097 a0001c0001t0011g0099 a0001c0002t0010g0028	3	106	0.0283	-12	c.364 others(31): Show c.364-18573_364-18562delCTTCCTTCCTTC	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	8/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	50491694	CTTATTTA others(5): Show CTTATTTATTTAT	C C	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00621.hp1 HG00741.hp1 others(23): Show HG00280.hp1 HG00621.hp1 HG00741.hp1 HG00741.hp2 HG01071.hp2 HG01243.hp1 HG01978.hp2 HG02145.hp1 HG02300.hp2 HG02647.hp1 HG02698.hp1 HG02976.hp2 HG03017.hp2 HG03225.hp2 HG03491.hp1 HG03669.hp1 HG03669.hp2 HG04184.hp2 NA18944.hp1 NA18952.hp2 NA18968.hp1 NA18992.hp1 NA19060.hp1 NA19068.hp2 NA19085.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 others(12): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 a0001c0001t0011 a0001c0001t0012 a0001c0001t0013 a0001c0001t0026 a0001c0001t0028 a0001c0001t0035 a0001c0001t0041 a0001c0002t0001 a0001c0002t0003 a0001c0002t0010 a0001c0002t0029 a0001c0002t0038	a0001c0001t0001g0086 a0001c0001t0002g0013 a0001c0001t0002g0067 others(23): Show a0001c0001t0001g0086 a0001c0001t0002g0013 a0001c0001t0002g0067 a0001c0001t0009g0085 a0001c0001t0011g0097 a0001c0001t0011g0099 a0001c0001t0012g0063 a0001c0001t0013g0068 a0001c0001t0026g0095 a0001c0001t0028g0093 a0001c0001t0035g0031 a0001c0001t0041g0025 a0001c0002t0001g0077 a0001c0002t0001g0080 a0001c0002t0001g0081 a0001c0002t0001g0083 a0001c0002t0001g0084 a0001c0002t0001g0087 a0001c0002t0001g0092 a0001c0002t0001g0096 a0001c0002t0001g0098 a0001c0002t0003g0008 a0001c0002t0003g0011 a0001c0002t0010g0012 a0001c0002t0029g0088 a0001c0002t0038g0069	26	106	0.2453	-12	c.364 others(31): Show c.364-11053_364-11042delATTTATTTATTT	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	8/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	50570591	GTTATTAT others(5): Show GTTATTATTATTA	G G	intron_variant intron_variant	MODIFIER	HG02886.hp2 HG02886.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0006 a0001c0001t0007g0006	1	106	0.0094	-12	c.810 others(31): Show c.810+17433_810+17444delATTATTATTATT	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	12/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	50597340	CATATATA others(5): Show CATATATACACGT	C C	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG02451.hp1 HG02698.hp2 others(6): Show HG01167.hp2 HG02451.hp1 HG02698.hp2 HG02886.hp1 HG02895.hp1 HG02897.hp2 HG02976.hp1 HG03209.hp2 HG03491.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 others(4): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0001c0002t0010 a0001c0002t0014 a0001c0002t0034 a0001c0002t0036	a0001c0001t0002g0026 a0001c0001t0004g0072 a0001c0001t0006g0051 others(6): Show a0001c0001t0002g0026 a0001c0001t0004g0072 a0001c0001t0006g0051 a0001c0001t0006g0066 a0001c0002t0010g0012 a0001c0002t0014g0014 a0001c0002t0014g0076 a0001c0002t0034g0062 a0001c0002t0036g0016	9	106	0.0849	-12	c.849 others(29): Show c.849+6434_849+6445delGTATATATACAC	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	13/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	50601152	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0035 a0001c0001t0035	a0001c0001t0035g0031 a0001c0001t0035g0031	1	106	0.0094	-12	c.849 others(31): Show c.849+10256_849+10267delAAAAAAAAAAAA	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	13/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	50668495	CATTATTA others(5): Show CATTATTATTATT	C C	intron_variant intron_variant	MODIFIER	HG02451.hp2 NA19085.hp2 HG02451.hp2 NA19085.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0050 a0001c0002t0001 a0001c0001t0050 a0001c0002t0001	a0001c0001t0050g0038 a0001c0002t0001g0080 a0001c0001t0050g0038 a0001c0002t0001g0080	2	106	0.0189	-12	c.103 others(31): Show c.1038+9863_1038+9874delATTATTATTATT	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	15/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG1_chr8_49906407_50801692	50763856	AACACACA others(5): Show AACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG02896.hp1 HG02965.hp1 others(5): Show HG00280.hp2 HG02896.hp1 HG02965.hp1 HG02976.hp1 HG03453.hp2 HG04115.hp1 NA18906.hp2 NA18968.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0004 a0001c0001t0026 others(3): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0026 a0001c0002t0001 a0001c0002t0014 a0001c0002t0045	a0001c0001t0002g0032 a0001c0001t0002g0033 a0001c0001t0004g0090 others(5): Show a0001c0001t0002g0032 a0001c0001t0002g0033 a0001c0001t0004g0090 a0001c0001t0004g0094 a0001c0001t0026g0095 a0001c0002t0001g0060 a0001c0002t0014g0076 a0001c0002t0045g0046	8	106	0.0755	-12	c.139 others(33): Show c.1395+11785_1395+11796delCACACACACACA	SNTG1	ENSG00000147481.17	transcript	ENST00000642720.2	protein_coding	18/18		INFO_REALIGN_3_PRIME	chr8	TogoVar
SNTG2_chr2_945849_1372613	947265	AAAAAATA others(5): Show AAAAAATAAAAAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp1 HG00140.hp2 HG00642.hp1 others(75): Show HG00140.hp1 HG00140.hp2 HG00642.hp1 HG00642.hp2 HG00673.hp2 HG01074.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp1 HG01169.hp1 HG01192.hp2 HG01256.hp1 HG01257.hp2 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01361.hp2 HG01496.hp1 HG01496.hp2 HG01891.hp2 HG01975.hp1 HG01975.hp2 HG02015.hp1 HG02015.hp2 HG02071.hp2 HG02109.hp2 HG02132.hp1 HG02148.hp2 HG02165.hp2 HG02273.hp1 HG02280.hp1 HG02293.hp2 HG02300.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02572.hp1 HG02615.hp2 HG02630.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02735.hp1 HG02738.hp1 HG02886.hp2 HG02895.hp1 HG02970.hp1 HG02976.hp1 HG02976.hp2 HG03209.hp2 HG03225.hp1 HG03453.hp1 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03654.hp1 HG03654.hp2 HG03710.hp2 HG03927.hp1 HG03942.hp2 HG04115.hp1 HG04184.hp1 NA18522.hp1 NA18943.hp1 NA18990.hp2 NA19000.hp1 NA19043.hp2 NA19084.hp2 NA20129.hp1 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp2 NA20905.hp1 NA21309.hp1	a0001 a0002 a0003 others(13): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008 a0009 a0010 a0013 a0014 a0015 a0016 a0017 a0018	a0001c0001 a0001c0002 a0002c0003 others(20): Show a0001c0001 a0001c0002 a0002c0003 a0002c0005 a0003c0007 a0003c0008 a0004c0004 a0004c0014 a0005c0006 a0005c0015 a0006c0009 a0006c0010 a0007c0016 a0007c0024 a0008c0011 a0009c0012 a0010c0013 a0013c0018 a0014c0032 a0015c0025 a0016c0023 a0017c0036 a0018c0035	a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 others(27): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 a0002c0003t0001 a0002c0005t0001 a0003c0007t0001 a0003c0007t0002 a0003c0008t0001 a0003c0008t0002 a0004c0004t0001 a0004c0004t0002 a0004c0014t0001 a0004c0014t0002 a0005c0006t0001 a0005c0006t0002 a0005c0015t0001 a0006c0009t0001 a0006c0010t0001 a0007c0016t0001 a0007c0024t0002 a0008c0011t0001 a0009c0012t0001 a0010c0013t0001 a0013c0018t0001 a0014c0032t0001 a0015c0025t0001 a0016c0023t0001 a0017c0036t0001 a0018c0035t0001	a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0024 others(75): Show a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0035 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0067 a0001c0001t0001g0078 a0001c0002t0001g0007 a0001c0002t0001g0010 a0001c0002t0001g0017 a0001c0002t0001g0022 a0001c0002t0001g0023 a0001c0002t0001g0027 a0001c0002t0001g0028 a0001c0002t0001g0029 a0001c0002t0001g0031 a0001c0002t0001g0041 a0001c0002t0001g0069 a0001c0002t0002g0002 a0001c0002t0002g0076 a0001c0002t0004g0053 a0002c0003t0001g0021 a0002c0003t0001g0026 a0002c0003t0001g0030 a0002c0003t0001g0051 a0002c0003t0001g0052 a0002c0003t0001g0061 a0002c0003t0001g0064 a0002c0005t0001g0014 a0002c0005t0001g0020 a0002c0005t0001g0032 a0003c0007t0001g0008 a0003c0007t0001g0018 a0003c0007t0001g0055 a0003c0007t0002g0075 a0003c0007t0002g0077 a0003c0008t0001g0013 a0003c0008t0001g0044 a0003c0008t0001g0060 a0003c0008t0002g0072 a0004c0004t0001g0040 a0004c0004t0001g0047 a0004c0004t0001g0065 a0004c0004t0002g0074 a0004c0014t0001g0036 a0004c0014t0001g0054 a0004c0014t0002g0001 a0005c0006t0001g0019 a0005c0006t0001g0079 a0005c0006t0002g0003 a0005c0015t0001g0037 a0006c0009t0001g0011 a0006c0009t0001g0049 a0006c0009t0001g0050 a0006c0010t0001g0006 a0006c0010t0001g0009 a0006c0010t0001g0012 a0006c0010t0001g0043 a0007c0016t0001g0005 a0007c0016t0001g0033 a0007c0024t0002g0073 a0008c0011t0001g0004 a0009c0012t0001g0066 a0010c0013t0001g0042 a0013c0018t0001g0045 a0013c0018t0001g0046 a0014c0032t0001g0059 a0015c0025t0001g0034 a0016c0023t0001g0048 a0017c0036t0001g0070 a0018c0035t0001g0071	78	190	0.4105	-12	c.-37 others(23): Show c.-3731_-3720delAAAAATAAAAAT	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding		3583		chr2	TogoVar
SNTG2_chr2_945849_1372613	955809	CAGCAAGT others(5): Show CAGCAAGTCCTCT	C C	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02451.hp1 HG02895.hp1 others(10): Show HG02109.hp2 HG02451.hp1 HG02895.hp1 HG02970.hp1 HG03209.hp2 HG03225.hp1 HG03453.hp1 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 NA20129.hp1 NA20300.hp2	a0001 a0003 a0004 others(4): Show a0001 a0003 a0004 a0005 a0007 a0017 a0018	a0001c0002 a0003c0007 a0003c0008 others(6): Show a0001c0002 a0003c0007 a0003c0008 a0004c0004 a0004c0014 a0005c0006 a0007c0024 a0017c0036 a0018c0035	a0001c0002t0001 a0001c0002t0002 a0003c0007t0001 others(8): Show a0001c0002t0001 a0001c0002t0002 a0003c0007t0001 a0003c0007t0002 a0003c0008t0002 a0004c0004t0002 a0004c0014t0002 a0005c0006t0002 a0007c0024t0002 a0017c0036t0001 a0018c0035t0001	a0001c0002t0001g0069 a0001c0002t0002g0002 a0001c0002t0002g0076 others(10): Show a0001c0002t0001g0069 a0001c0002t0002g0002 a0001c0002t0002g0076 a0003c0007t0001g0068 a0003c0007t0002g0075 a0003c0007t0002g0077 a0003c0008t0002g0072 a0004c0004t0002g0074 a0004c0014t0002g0001 a0005c0006t0002g0003 a0007c0024t0002g0073 a0017c0036t0001g0070 a0018c0035t0001g0071	13	190	0.0684	-12	c.72+ others(27): Show c.72+4754_72+4765delAGCAAGTCCTCT	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SNTG2_chr2_945849_1372613	956030	GGCCCCTG others(5): Show GGCCCCTGCCCCT	G G	intron_variant intron_variant	MODIFIER	HG00642.hp2 NA18522.hp1 HG00642.hp2 NA18522.hp1	a0001 a0005 a0001 a0005	a0001c0001 a0005c0006 a0001c0001 a0005c0006	a0001c0001t0001 a0005c0006t0001 a0001c0001t0001 a0005c0006t0001	a0001c0001t0001g0078 a0005c0006t0001g0079 a0001c0001t0001g0078 a0005c0006t0001g0079	2	190	0.0105	-12	c.72+ others(27): Show c.72+4981_72+4992delGCCCCTGCCCCT	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SNTG2_chr2_945849_1372613	986067	TAGAGAGA others(5): Show TAGAGAGAGAGAG	T T	intron_variant intron_variant	MODIFIER	HG03453.hp1 HG03453.hp1	a0003 a0003	a0003c0007 a0003c0007	a0003c0007t0002 a0003c0007t0002	a0003c0007t0002g0075 a0003c0007t0002g0075	1	190	0.0053	-12	c.72+ others(29): Show c.72+35031_72+35042delGAGAGAGAGAGA	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SNTG2_chr2_945849_1372613	996673	GTTTTTTT others(5): Show GTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG02071.hp1 NA18942.hp1 NA18986.hp2 HG02071.hp1 NA18942.hp1 NA18986.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0113 a0002c0003t0001g0171 a0002c0003t0001g0174 a0002c0003t0001g0113 a0002c0003t0001g0171 a0002c0003t0001g0174	3	190	0.0158	-12	c.72+ others(29): Show c.72+45625_72+45636delTTTTTTTTTTTT	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SNTG2_chr2_945849_1372613	1005806	AATATATA others(5): Show AATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01192.hp1 HG01256.hp2 others(11): Show HG01175.hp1 HG01192.hp1 HG01256.hp2 HG02071.hp1 HG02630.hp2 HG02647.hp1 HG03486.hp2 HG03490.hp1 NA18961.hp1 NA18961.hp2 NA18969.hp1 NA18983.hp2 NA18990.hp1 NA19084.hp2	a0001 a0002 a0003 others(6): Show a0001 a0002 a0003 a0004 a0006 a0009 a0012 a0013 a0019	a0001c0001 a0001c0002 a0002c0003 others(9): Show a0001c0001 a0001c0002 a0002c0003 a0002c0022 a0003c0007 a0003c0008 a0004c0004 a0006c0009 a0009c0012 a0012c0019 a0013c0018 a0019c0030	a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 others(10): Show a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 a0002c0003t0001 a0002c0022t0001 a0003c0007t0002 a0003c0008t0001 a0004c0004t0001 a0006c0009t0001 a0009c0012t0001 a0012c0019t0001 a0013c0018t0001 a0019c0030t0001	a0001c0001t0001g0039 a0001c0001t0001g0124 a0001c0001t0003g0120 others(11): Show a0001c0001t0001g0039 a0001c0001t0001g0124 a0001c0001t0003g0120 a0001c0002t0001g0186 a0002c0003t0001g0174 a0002c0022t0001g0155 a0003c0007t0002g0077 a0003c0008t0001g0130 a0004c0004t0001g0169 a0006c0009t0001g0049 a0009c0012t0001g0166 a0012c0019t0001g0122 a0013c0018t0001g0045 a0019c0030t0001g0160	14	190	0.0737	-12	c.72+ others(29): Show c.72+54796_72+54807delTATATATATATA	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	1/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SNTG2_chr2_945849_1372613	1079269	CAGGGCAC others(5): Show CAGGGCACAGGAA	C C	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG01346.hp1 HG01975.hp2 others(16): Show HG01192.hp2 HG01346.hp1 HG01975.hp2 HG02015.hp1 HG02071.hp2 HG02132.hp1 HG02293.hp2 HG02300.hp1 HG02602.hp2 HG02738.hp2 HG02965.hp1 HG03490.hp2 HG03710.hp2 HG04115.hp1 HG04184.hp1 HG04184.hp2 NA18943.hp1 NA18990.hp2 NA19000.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0006 a0008	a0001c0002 a0002c0005 a0003c0007 others(3): Show a0001c0002 a0002c0005 a0003c0007 a0004c0014 a0006c0010 a0008c0011	a0001c0002t0001 a0002c0005t0001 a0003c0007t0001 others(3): Show a0001c0002t0001 a0002c0005t0001 a0003c0007t0001 a0004c0014t0001 a0006c0010t0001 a0008c0011t0001	a0001c0002t0001g0007 a0001c0002t0001g0010 a0001c0002t0001g0022 others(16): Show a0001c0002t0001g0007 a0001c0002t0001g0010 a0001c0002t0001g0022 a0001c0002t0001g0023 a0001c0002t0001g0027 a0001c0002t0001g0028 a0001c0002t0001g0029 a0001c0002t0001g0031 a0001c0002t0001g0133 a0001c0002t0001g0137 a0001c0002t0001g0172 a0002c0005t0001g0014 a0002c0005t0001g0032 a0002c0005t0001g0107 a0003c0007t0001g0055 a0004c0014t0001g0036 a0004c0014t0001g0054 a0006c0010t0001g0012 a0008c0011t0001g0004	19	190	0.1000	-12	c.73- others(27): Show c.73-4248_73-4237delAGGGCACAGGAA	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	1/16			chr2	TogoVar
SNTG2_chr2_945849_1372613	1132195	GTGTGTAT others(5): Show GTGTGTATATATA	G G	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0007 a0007	a0007c0016 a0007c0016	a0007c0016t0001 a0007c0016t0001	a0007c0016t0001g0135 a0007c0016t0001g0135	1	190	0.0053	-12	c.326 others(29): Show c.326-5403_326-5392delATGTGTATATAT	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	4/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SNTG2_chr2_945849_1372613	1151905	AAGAATTG others(5): Show AAGAATTGAAAAC	A A	intron_variant intron_variant	MODIFIER	HG00673.hp2 HG02109.hp1 HG02109.hp2 others(9): Show HG00673.hp2 HG02109.hp1 HG02109.hp2 HG02630.hp2 HG02738.hp1 HG03239.hp2 NA18942.hp2 NA18986.hp1 NA19000.hp2 NA19043.hp2 NA19084.hp2 NA20129.hp1	a0001 a0003 a0004 others(4): Show a0001 a0003 a0004 a0006 a0007 a0008 a0021	a0001c0001 a0001c0002 a0003c0008 others(6): Show a0001c0001 a0001c0002 a0003c0008 a0004c0004 a0006c0009 a0007c0016 a0007c0017 a0008c0011 a0021c0027	a0001c0001t0001 a0001c0002t0002 a0003c0008t0002 others(6): Show a0001c0001t0001 a0001c0002t0002 a0003c0008t0002 a0004c0004t0001 a0006c0009t0001 a0007c0016t0001 a0007c0017t0001 a0008c0011t0001 a0021c0027t0001	a0001c0001t0001g0035 a0001c0001t0001g0039 a0001c0002t0002g0002 others(9): Show a0001c0001t0001g0035 a0001c0001t0001g0039 a0001c0002t0002g0002 a0003c0008t0002g0072 a0004c0004t0001g0040 a0004c0004t0001g0177 a0006c0009t0001g0049 a0007c0016t0001g0033 a0007c0017t0001g0118 a0008c0011t0001g0128 a0008c0011t0001g0188 a0021c0027t0001g0127	12	190	0.0632	-12	c.412 others(31): Show c.412-13639_412-13628delATTGAAAACAGA	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	6/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SNTG2_chr2_945849_1372613	1190495	CTATATAT others(5): Show CTATATATATATA	C C	intron_variant intron_variant	MODIFIER	HG02922.hp2 HG04184.hp2 HG02922.hp2 HG04184.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0102 a0001c0002t0001g0137 a0001c0001t0001g0102 a0001c0002t0001g0137	2	190	0.0105	-12	c.591 others(31): Show c.591+17346_591+17357delATATATATATAT	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	8/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SNTG2_chr2_945849_1372613	1221659	CGGTCCCC others(5): Show CGGTCCCCCCCGG	C C	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG02071.hp1 HG02738.hp2 HG01496.hp1 HG02071.hp1 HG02738.hp2	a0002 a0002	a0002c0003 a0002c0005 a0002c0003 a0002c0005	a0002c0003t0001 a0002c0005t0001 a0002c0003t0001 a0002c0005t0001	a0002c0003t0001g0026 a0002c0003t0001g0174 a0002c0005t0001g0107 a0002c0003t0001g0026 a0002c0003t0001g0174 a0002c0005t0001g0107	3	190	0.0158	-12	c.719 others(31): Show c.719+12430_719+12441delGGTCCCCCCCGG	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	9/16			chr2	TogoVar
SNTG2_chr2_945849_1372613	1221741	CTGTCTCT others(5): Show CTGTCTCTGTCTG	C C	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02451.hp2	a0015 a0015	a0015c0025 a0015c0025	a0015c0025t0001 a0015c0025t0001	a0015c0025t0001g0034 a0015c0025t0001g0034	1	190	0.0053	-12	c.719 others(31): Show c.719+12519_719+12530delGTCTGTGTCTCT	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	9/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SNTG2_chr2_945849_1372613	1222061	CTGTTTCT others(5): Show CTGTTTCTCTCTG	C C	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG01106.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0148 a0002c0003t0001g0148	1	190	0.0053	-12	c.719 others(31): Show c.719+12833_719+12844delGTTTCTCTCTGT	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	9/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SNTG2_chr2_945849_1372613	1222095	GTCTCTCT others(5): Show GTCTCTCTCTGTC	G G	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01175.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0120 a0001c0001t0003g0120	1	190	0.0053	-12	c.719 others(31): Show c.719+12873_719+12884delCTGTCTCTCTCT	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	9/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SNTG2_chr2_945849_1372613	1239126	ATTTGCAG others(5): Show ATTTGCAGAAATG	A A	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01099.hp1 HG01192.hp1 others(17): Show HG00735.hp1 HG01099.hp1 HG01192.hp1 HG01257.hp2 HG01346.hp2 HG01516.hp2 HG01517.hp2 HG02717.hp2 HG02922.hp1 HG02976.hp2 HG03471.hp2 HG03710.hp1 HG03942.hp2 NA18522.hp2 NA18942.hp2 NA18968.hp2 NA18986.hp1 NA18990.hp2 NA19000.hp2 homoSapiens_chm13v2.hp1	a0003 a0005 a0006 others(4): Show a0003 a0005 a0006 a0008 a0009 a0021 a0022	a0003c0007 a0003c0008 a0005c0006 others(6): Show a0003c0007 a0003c0008 a0005c0006 a0006c0010 a0008c0011 a0008c0031 a0009c0012 a0021c0027 a0022c0034	a0003c0007t0001 a0003c0008t0001 a0005c0006t0001 others(6): Show a0003c0007t0001 a0003c0008t0001 a0005c0006t0001 a0006c0010t0001 a0008c0011t0001 a0008c0031t0001 a0009c0012t0001 a0021c0027t0001 a0022c0034t0001	a0003c0007t0001g0018 a0003c0007t0001g0068 a0003c0007t0001g0080 others(17): Show a0003c0007t0001g0018 a0003c0007t0001g0068 a0003c0007t0001g0080 a0003c0008t0001g0044 a0003c0008t0001g0060 a0003c0008t0001g0095 a0003c0008t0001g0106 a0005c0006t0001g0176 a0005c0006t0001g0189 a0006c0010t0001g0006 a0008c0011t0001g0004 a0008c0011t0001g0128 a0008c0011t0001g0182 a0008c0011t0001g0188 a0008c0031t0001g0110 a0009c0012t0001g0096 a0009c0012t0001g0147 a0009c0012t0001g0166 a0021c0027t0001g0127 a0022c0034t0001g0146	20	190	0.1053	-12	c.850 others(27): Show c.850-607_850-596delCAGAAATGTTTG	SNTG2	ENSG00000172554.12	transcript	ENST00000308624.10	protein_coding	10/16		INFO_REALIGN_3_PRIME	chr2	TogoVar
SNUPN_chr15_75593086_75630725	75615594	ATTTTTTT others(5): Show ATTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG03098.hp1 HG03098.hp2 HG02280.hp1 HG03098.hp1 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0249 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0249	3	344	0.0087	-12	c.303 others(29): Show c.303+1802_303+1813delAAAAAAAAAAAA	SNUPN	ENSG00000169371.14	transcript	ENST00000308588.10	protein_coding	3/8			chr15	TogoVar
SNW1_chr14_77712599_77766156	77741096	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA18943.hp2 NA18947.hp2 NA18953.hp1 NA18943.hp2 NA18947.hp2 NA18953.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0154 a0001c0003t0001g0155 a0001c0003t0001g0156 a0001c0003t0001g0154 a0001c0003t0001g0155 a0001c0003t0001g0156	3	366	0.0082	-12	c.331 others(29): Show c.331-2047_331-2036delTTTTTTTTTTTT	SNW1	ENSG00000100603.14	transcript	ENST00000261531.12	protein_coding	3/13			chr14	TogoVar
SNW1_chr14_77712599_77766156	77746922	GTCTCCCT others(5): Show GTCTCCCTCTCCC	G G	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0169 a0001c0001t0001g0169	1	366	0.0027	-12	c.330 others(29): Show c.330+4385_330+4396delGGGAGAGGGAGA	SNW1	ENSG00000100603.14	transcript	ENST00000261531.12	protein_coding	3/13			chr14	TogoVar
SNW1_chr14_77712599_77766156	77751805	GACACACA others(5): Show GACACACACACAC	G G	intron_variant intron_variant	MODIFIER	homoSapiens_chm13v2.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0053 a0001c0003t0001g0053	1	366	0.0027	-12	c.169 others(27): Show c.169-337_169-326delGTGTGTGTGTGT	SNW1	ENSG00000100603.14	transcript	ENST00000261531.12	protein_coding	2/13			chr14	TogoVar
SNW1_chr14_77712599_77766156	77757919	CATCTATC others(5): Show CATCTATCTATCT	C C	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02647.hp1 HG02683.hp2 others(3): Show HG02055.hp2 HG02647.hp1 HG02683.hp2 HG02738.hp1 HG03139.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 others(3): Show a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0002t0001g0108 a0001c0002t0001g0109	6	366	0.0164	-12	c.15- others(27): Show c.15-2811_15-2800delAGATAGATAGAT	SNW1	ENSG00000100603.14	transcript	ENST00000261531.12	protein_coding	1/13			chr14	TogoVar

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