Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
SNX29_chr16_11971734_12579287	12261421	AGCTCCGG others(5): Show AGCTCCGGTCTGT	A A	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01981.hp2 HG01099.hp1 HG01981.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0011 a0001c0003t0025 a0001c0003t0011 a0001c0003t0025	a0001c0003t0011g0098 a0001c0003t0025g0083 a0001c0003t0011g0098 a0001c0003t0025g0083	2	176	0.0114	-12	c.167 others(33): Show c.1679-16509_1679-16498delTCCGGTCTGTGC	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	14/20		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNX29_chr16_11971734_12579287	12355843	TAAAAAAA others(5): Show TAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG02683.hp2 HG02922.hp2 HG02683.hp2 HG02922.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0004 a0001c0003t0002 a0001c0001t0004 a0001c0003t0002	a0001c0001t0004g0132 a0001c0003t0002g0058 a0001c0001t0004g0132 a0001c0003t0002g0058	2	176	0.0114	-12	c.178 others(29): Show c.1783-298_1783-287delAAAAAAAAAAAA	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	15/20		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNX29_chr16_11971734_12579287	12366042	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0087 a0001c0002t0087	a0001c0002t0087g0147 a0001c0002t0087g0147	1	176	0.0057	-12	c.189 others(31): Show c.1899+9780_1899+9791delAAAAAAAAAAAA	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	16/20		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNX29_chr16_11971734_12579287	12403192	TTGTGTGT others(5): Show TTGTGTGTGTATG	T T	intron_variant intron_variant	MODIFIER	HG02615.hp1 HG02630.hp1 HG02922.hp1 others(4): Show HG02615.hp1 HG02630.hp1 HG02922.hp1 HG02976.hp1 HG03098.hp1 HG06807.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0006 others(3): Show a0001c0001 a0001c0002 a0001c0006 a0001c0018 a0001c0020 a0001c0021	a0001c0001t0007 a0001c0001t0048 a0001c0002t0091 others(4): Show a0001c0001t0007 a0001c0001t0048 a0001c0002t0091 a0001c0006t0010 a0001c0018t0007 a0001c0020t0010 a0001c0021t0111	a0001c0001t0007g0008 a0001c0001t0048g0052 a0001c0002t0091g0011 others(4): Show a0001c0001t0007g0008 a0001c0001t0048g0052 a0001c0002t0091g0011 a0001c0006t0010g0041 a0001c0018t0007g0057 a0001c0020t0010g0167 a0001c0021t0111g0035	7	176	0.0398	-12	c.195 others(29): Show c.1956-246_1956-235delATGTGTGTGTGT	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	17/20		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNX29_chr16_11971734_12579287	12447165	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02451.hp1 HG02451.hp2 others(6): Show HG01884.hp1 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02895.hp2 HG02965.hp1 HG03209.hp2 HG03225.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0001c0002 a0001c0004 others(4): Show a0001c0001 a0001c0002 a0001c0004 a0001c0006 a0001c0007 a0001c0012 a0006c0017	a0001c0001t0002 a0001c0001t0013 a0001c0002t0077 others(6): Show a0001c0001t0002 a0001c0001t0013 a0001c0002t0077 a0001c0004t0080 a0001c0006t0021 a0001c0006t0078 a0001c0007t0002 a0001c0012t0002 a0006c0017t0002	a0001c0001t0002g0081 a0001c0001t0013g0016 a0001c0002t0077g0120 others(6): Show a0001c0001t0002g0081 a0001c0001t0013g0016 a0001c0002t0077g0120 a0001c0004t0080g0054 a0001c0006t0021g0073 a0001c0006t0078g0027 a0001c0007t0002g0004 a0001c0012t0002g0028 a0006c0017t0002g0024	9	176	0.0511	-12	c.203 others(33): Show c.2038-30533_2038-30522delAAAAAAAAAAAA	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	18/20		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNX29_chr16_11971734_12579287	12461976	AAAATATA others(5): Show AAAATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00642.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0026 a0001c0001t0026	a0001c0001t0026g0062 a0001c0001t0026g0062	1	176	0.0057	-12	c.203 others(33): Show c.2038-15741_2038-15730delAATATATATATA	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	18/20		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNX29_chr16_11971734_12579287	12476377	AAAAAAAA others(5): Show AAAAAAAATATAT	A A	intron_variant intron_variant	MODIFIER	HG03579.hp1 NA19070.hp2 HG03579.hp1 NA19070.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0109 a0001c0002t0003 a0001c0002t0109	a0001c0002t0003g0152 a0001c0002t0109g0036 a0001c0002t0003g0152 a0001c0002t0109g0036	2	176	0.0114	-12	c.203 others(31): Show c.2038-1340_2038-1329delAAAAAATATATA	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	18/20		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNX29_chr16_11971734_12579287	12476379	AAAAAATA others(5): Show AAAAAATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02486.hp2 NA18979.hp1 others(2): Show HG02109.hp1 HG02486.hp2 NA18979.hp1 NA19085.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0027 a0001c0001t0028 a0001c0002t0106 others(2): Show a0001c0001t0027 a0001c0001t0028 a0001c0002t0106 a0001c0003t0025 a0001c0003t0026	a0001c0001t0027g0082 a0001c0001t0028g0122 a0001c0002t0106g0123 others(2): Show a0001c0001t0027g0082 a0001c0001t0028g0122 a0001c0002t0106g0123 a0001c0003t0025g0010 a0001c0003t0026g0012	5	176	0.0284	-12	c.203 others(31): Show c.2038-1338_2038-1327delAAAATATATATA	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	18/20		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNX29_chr16_11971734_12579287	12476381	AAAATATA others(5): Show AAAATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA18942.hp1 NA18990.hp2 NA19009.hp1 NA18942.hp1 NA18990.hp2 NA19009.hp1	a0001 a0001	a0001c0002 a0001c0004 a0001c0002 a0001c0004	a0001c0002t0082 a0001c0004t0084 a0001c0004t0085 a0001c0002t0082 a0001c0004t0084 a0001c0004t0085	a0001c0002t0082g0006 a0001c0004t0084g0135 a0001c0004t0085g0023 a0001c0002t0082g0006 a0001c0004t0084g0135 a0001c0004t0085g0023	3	176	0.0171	-12	c.203 others(31): Show c.2038-1336_2038-1325delAATATATATATA	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	18/20		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNX29_chr16_11971734_12579287	12481513	GACACACA others(5): Show GACACACACACAC	G G	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG02896.hp2 HG03490.hp1 HG01167.hp1 HG02896.hp2 HG03490.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0007c0016 a0001c0001 a0007c0016	a0001c0001t0009 a0001c0001t0061 a0007c0016t0108 a0001c0001t0009 a0001c0001t0061 a0007c0016t0108	a0001c0001t0009g0111 a0001c0001t0061g0173 a0007c0016t0108g0049 a0001c0001t0009g0111 a0001c0001t0061g0173 a0007c0016t0108g0049	3	176	0.0171	-12	c.217 others(31): Show c.2178+3685_2178+3696delACACACACACAC	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	19/20		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNX29_chr16_11971734_12579287	12483114	GTTTTTTT others(5): Show GTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG02523.hp1 HG02622.hp2 NA19070.hp1 HG02523.hp1 HG02622.hp2 NA19070.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0007 a0001c0003t0002 a0001c0003t0104 a0001c0001t0007 a0001c0003t0002 a0001c0003t0104	a0001c0001t0007g0175 a0001c0003t0002g0119 a0001c0003t0104g0156 a0001c0001t0007g0175 a0001c0003t0002g0119 a0001c0003t0104g0156	3	176	0.0171	-12	c.217 others(31): Show c.2178+5273_2178+5284delTTTTTTTTTTTT	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	19/20		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNX29_chr16_11971734_12579287	12512367	AAAATATA others(5): Show AAAATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00438.hp2 HG02258.hp1 HG02630.hp2 others(2): Show HG00438.hp2 HG02258.hp1 HG02630.hp2 NA18986.hp1 NA18990.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 a0001c0001 a0001c0002 a0001c0004	a0001c0001t0002 a0001c0002t0107 a0001c0004t0003 others(2): Show a0001c0001t0002 a0001c0002t0107 a0001c0004t0003 a0001c0004t0079 a0001c0004t0084	a0001c0001t0002g0020 a0001c0002t0107g0069 a0001c0004t0003g0161 others(2): Show a0001c0001t0002g0020 a0001c0002t0107g0069 a0001c0004t0003g0161 a0001c0004t0079g0070 a0001c0004t0084g0135	5	176	0.0284	-12	c.217 others(33): Show c.2179-12333_2179-12322delAATATATATATA	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	19/20		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNX29_chr16_11971734_12579287	12512369	AATATATA others(5): Show AATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02965.hp1 HG02965.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0021 a0001c0006t0021	a0001c0006t0021g0073 a0001c0006t0021g0073	1	176	0.0057	-12	c.217 others(33): Show c.2179-12295_2179-12284delTATATATATATA	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding	19/20		INFO_REALIGN_3_PRIME	chr16	TogoVar
SNX29_chr16_11971734_12579287	12577402	TACACACA others(5): Show TACACACACACAC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00438.hp2 HG00741.hp1 HG01074.hp2 others(7): Show HG00438.hp2 HG00741.hp1 HG01074.hp2 HG01261.hp1 HG02922.hp1 HG02965.hp1 HG03209.hp1 NA18522.hp1 NA18950.hp2 NA19070.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 others(2): Show a0001c0001 a0001c0002 a0001c0004 a0001c0006 a0001c0024	a0001c0001t0002 a0001c0001t0007 a0001c0002t0073 others(7): Show a0001c0001t0002 a0001c0001t0007 a0001c0002t0073 a0001c0002t0088 a0001c0002t0091 a0001c0004t0021 a0001c0004t0083 a0001c0004t0092 a0001c0006t0021 a0001c0024t0038	a0001c0001t0002g0020 a0001c0001t0007g0175 a0001c0002t0073g0096 others(7): Show a0001c0001t0002g0020 a0001c0001t0007g0175 a0001c0002t0073g0096 a0001c0002t0088g0018 a0001c0002t0091g0011 a0001c0004t0021g0080 a0001c0004t0083g0068 a0001c0004t0092g0102 a0001c0006t0021g0073 a0001c0024t0038g0148	10	176	0.0568	-12	c.87 others(23): Show c.8774_*8785delACACACACACAC	SNX29	ENSG00000048471.14	transcript	ENST00000566228.6	protein_coding		3116		chr16	TogoVar
SNX2_chr5_122770080_122839543	122823779	CGTGTGTG others(5): Show CGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0095 a0001c0001t0001g0095	1	372	0.0027	-12	c.121 others(31): Show c.1213-2250_1213-2239delGTGTGTGTGTGT	SNX2	ENSG00000205302.7	transcript	ENST00000379516.7	protein_coding	11/14		INFO_REALIGN_3_PRIME	chr5	TogoVar
SNX2_chr5_122770080_122839543	122829775	TACACACA others(5): Show TACACACACACAC	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00280.hp1 HG00323.hp1 HG01175.hp1 others(10): Show HG00280.hp1 HG00323.hp1 HG01175.hp1 HG01978.hp1 HG02071.hp1 HG03195.hp2 NA18522.hp2 NA18906.hp2 NA18990.hp1 NA19005.hp1 NA19010.hp2 NA19057.hp2 NA19077.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0023 a0001c0001t0065 a0001c0002t0016 others(3): Show a0001c0001t0023 a0001c0001t0065 a0001c0002t0016 a0001c0002t0024 a0001c0002t0066 a0001c0002t0067	a0001c0001t0023g0293 a0001c0001t0023g0294 a0001c0001t0023g0295 others(10): Show a0001c0001t0023g0293 a0001c0001t0023g0294 a0001c0001t0023g0295 a0001c0001t0065g0304 a0001c0002t0016g0148 a0001c0002t0016g0152 a0001c0002t0016g0158 a0001c0002t0016g0159 a0001c0002t0024g0149 a0001c0002t0024g0151 a0001c0002t0024g0160 a0001c0002t0066g0157 a0001c0002t0067g0150	13	372	0.0350	-12	c.15 others(21): Show c.152_*163delACACACACACAC	SNX2	ENSG00000205302.7	transcript	ENST00000379516.7	protein_coding	15/15	152	INFO_REALIGN_3_PRIME	chr5	TogoVar
SNX30_chr9_112745760_112879987	112763360	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG01255.hp1 NA18998.hp2 others(2): Show HG00544.hp2 HG01255.hp1 NA18998.hp2 NA19074.hp1 NA19079.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0002 a0002c0003t0004 a0001c0001t0002 a0002c0003t0004	a0001c0001t0002g0025 a0001c0001t0002g0077 a0002c0003t0004g0012 others(2): Show a0001c0001t0002g0025 a0001c0001t0002g0077 a0002c0003t0004g0012 a0002c0003t0004g0013 a0002c0003t0004g0014	5	338	0.0148	-12	c.156 others(31): Show c.156+12220_156+12231delTTTTTTTTTTTT	SNX30	ENSG00000148158.17	transcript	ENST00000374232.8	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr9	TogoVar
SNX30_chr9_112745760_112879987	112817401	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01361.hp1 HG01361.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0147 a0001c0001t0001g0147	1	338	0.0030	-12	c.349 others(27): Show c.349-285_349-274delTTTTTTTTTTTT	SNX30	ENSG00000148158.17	transcript	ENST00000374232.8	protein_coding	2/8		INFO_REALIGN_3_PRIME	chr9	TogoVar
SNX30_chr9_112745760_112879987	112832451	AGAGAGAG others(5): Show AGAGAGAGAGTGT	A A	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02922.hp2 HG02976.hp2 others(1): Show HG02145.hp2 HG02922.hp2 HG02976.hp2 NA19030.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0127 a0001c0002t0004g0219 a0001c0002t0004g0220 others(1): Show a0001c0002t0004g0127 a0001c0002t0004g0219 a0001c0002t0004g0220 a0001c0002t0004g0227	4	338	0.0118	-12	c.618 others(29): Show c.618+1570_618+1581delAGAGAGAGTGTG	SNX30	ENSG00000148158.17	transcript	ENST00000374232.8	protein_coding	4/8		INFO_REALIGN_3_PRIME	chr9	TogoVar
SNX30_chr9_112745760_112879987	112832455	AGAGAGTG others(5): Show AGAGAGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00621.hp1 HG01952.hp2 others(22): Show HG00423.hp2 HG00621.hp1 HG01952.hp2 HG01981.hp1 HG02004.hp1 HG02080.hp1 HG02135.hp1 HG02273.hp2 HG03654.hp1 HG03927.hp2 NA18941.hp2 NA18954.hp2 NA18955.hp2 NA18957.hp1 NA18965.hp1 NA18966.hp2 NA18974.hp1 NA18975.hp1 NA18993.hp2 NA18995.hp1 NA19000.hp1 NA19057.hp1 NA19058.hp1 NA19067.hp1 NA19078.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0003 a0001c0002t0004 others(5): Show a0001c0002t0001 a0001c0002t0003 a0001c0002t0004 a0001c0002t0006 a0001c0002t0013 a0001c0002t0014 a0001c0002t0026 a0001c0002t0052	a0001c0002t0001g0026 a0001c0002t0001g0027 a0001c0002t0001g0028 others(22): Show a0001c0002t0001g0026 a0001c0002t0001g0027 a0001c0002t0001g0028 a0001c0002t0001g0029 a0001c0002t0001g0030 a0001c0002t0001g0031 a0001c0002t0001g0032 a0001c0002t0001g0201 a0001c0002t0003g0212 a0001c0002t0004g0319 a0001c0002t0006g0200 a0001c0002t0006g0202 a0001c0002t0006g0205 a0001c0002t0006g0208 a0001c0002t0006g0210 a0001c0002t0006g0213 a0001c0002t0006g0214 a0001c0002t0006g0215 a0001c0002t0006g0216 a0001c0002t0013g0196 a0001c0002t0013g0211 a0001c0002t0014g0203 a0001c0002t0026g0198 a0001c0002t0026g0209 a0001c0002t0052g0204	25	338	0.0740	-12	c.618 others(29): Show c.618+1574_618+1585delAGAGTGTGTGTG	SNX30	ENSG00000148158.17	transcript	ENST00000374232.8	protein_coding	4/8		INFO_REALIGN_3_PRIME	chr9	TogoVar
SNX30_chr9_112745760_112879987	112834843	AACACACA others(5): Show AACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG03139.hp2 HG03453.hp2 HG03139.hp2 HG03453.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0005 a0001c0002t0005	a0001c0002t0005g0225 a0001c0002t0005g0226 a0001c0002t0005g0225 a0001c0002t0005g0226	2	338	0.0059	-12	c.619 others(29): Show c.619-1342_619-1331delACACACACACAC	SNX30	ENSG00000148158.17	transcript	ENST00000374232.8	protein_coding	4/8		INFO_REALIGN_3_PRIME	chr9	TogoVar
SNX30_chr9_112745760_112879987	112857764	GCATGCAT others(5): Show GCATGCATCCATC	G G	intron_variant intron_variant	MODIFIER	HG02602.hp1 HG03669.hp1 HG03927.hp1 others(2): Show HG02602.hp1 HG03669.hp1 HG03927.hp1 HG04199.hp2 NA19091.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0002 a0002c0003t0004 a0001c0001t0002 a0002c0003t0004	a0001c0001t0002g0033 a0001c0001t0002g0086 a0001c0001t0002g0121 others(2): Show a0001c0001t0002g0033 a0001c0001t0002g0086 a0001c0001t0002g0121 a0001c0001t0002g0308 a0002c0003t0004g0024	5	338	0.0148	-12	c.110 others(31): Show c.1102-6479_1102-6468delGCATCCATCCAT	SNX30	ENSG00000148158.17	transcript	ENST00000374232.8	protein_coding	7/8		INFO_REALIGN_3_PRIME	chr9	TogoVar
SNX30_chr9_112745760_112879987	112865624	CATATATA others(5): Show CATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02818.hp2 NA18960.hp2 NA19070.hp1 others(1): Show HG02818.hp2 NA18960.hp2 NA19070.hp1 NA19074.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0292 a0001c0001t0003g0293 a0001c0001t0003g0294 others(1): Show a0001c0001t0003g0292 a0001c0001t0003g0293 a0001c0001t0003g0294 a0001c0001t0003g0301	4	338	0.0118	-12	c.125 others(31): Show c.1254+1252_1254+1263delATATATATATAT	SNX30	ENSG00000148158.17	transcript	ENST00000374232.8	protein_coding	8/8		INFO_REALIGN_3_PRIME	chr9	TogoVar
SNX30_chr9_112745760_112879987	112877439	GATGAGTA others(5): Show GATGAGTAAGGGT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18941.hp1 NA18941.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0195 a0001c0001t0010g0195	1	338	0.0030	-12	c.85 others(23): Show c.8597_*8608delATGAGTAAGGGT	SNX30	ENSG00000148158.17	transcript	ENST00000374232.8	protein_coding		2453		chr9	TogoVar
SNX31_chr8_100567889_100654665	100622664	GTAAATAA others(5): Show GTAAATAAATAAA	G G	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02717.hp1 HG02922.hp2 HG02572.hp2 HG02717.hp1 HG02922.hp2	a0003 a0007 a0008 a0003 a0007 a0008	a0003c0003 a0007c0007 a0008c0008 a0003c0003 a0007c0007 a0008c0008	a0003c0003t0005 a0007c0007t0002 a0008c0008t0002 a0003c0003t0005 a0007c0007t0002 a0008c0008t0002	a0003c0003t0005g0108 a0007c0007t0002g0107 a0008c0008t0002g0109 a0003c0003t0005g0108 a0007c0007t0002g0107 a0008c0008t0002g0109	3	304	0.0099	-12	c.322 others(29): Show c.322-4946_322-4935delTTTATTTATTTA	SNX31	ENSG00000174226.9	transcript	ENST00000311812.7	protein_coding	4/13			chr8	TogoVar
SNX31_chr8_100567889_100654665	100628813	GGTGTGTG others(5): Show GGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02258.hp2 HG02280.hp1 others(3): Show HG02145.hp2 HG02258.hp2 HG02280.hp1 HG02486.hp1 HG03130.hp1 NA19030.hp2	a0002 a0003 a0002 a0003	a0002c0002 a0003c0003 a0002c0002 a0003c0003	a0002c0002t0002 a0002c0002t0005 a0003c0003t0003 a0002c0002t0002 a0002c0002t0005 a0003c0003t0003	a0002c0002t0002g0010 a0002c0002t0002g0011 a0002c0002t0002g0012 others(3): Show a0002c0002t0002g0010 a0002c0002t0002g0011 a0002c0002t0002g0012 a0002c0002t0002g0015 a0002c0002t0005g0016 a0003c0003t0003g0177	6	304	0.0197	-12	c.321 others(29): Show c.321+1502_321+1513delACACACACACAC	SNX31	ENSG00000174226.9	transcript	ENST00000311812.7	protein_coding	4/13			chr8	TogoVar
SNX31_chr8_100567889_100654665	100641585	TATATATA others(5): Show TATATATATATAC	T T	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG00741.hp1 HG00741.hp2 others(35): Show HG00609.hp1 HG00741.hp1 HG00741.hp2 HG01099.hp1 HG01168.hp2 HG01169.hp2 HG01175.hp1 HG01256.hp2 HG01258.hp2 HG01261.hp1 HG01346.hp1 HG01928.hp2 HG01943.hp2 HG01975.hp1 HG02015.hp2 HG02027.hp2 HG02040.hp2 HG02135.hp1 HG02135.hp2 HG02145.hp2 HG02698.hp2 HG02717.hp1 HG02723.hp1 HG02970.hp1 HG03017.hp1 HG03490.hp2 HG03492.hp1 HG03654.hp1 HG03688.hp1 NA18747.hp1 NA18957.hp2 NA18960.hp2 NA18980.hp2 NA18982.hp2 NA19030.hp2 NA19057.hp1 NA19072.hp1 NA20905.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0005 a0007 a0008	a0001c0001 a0002c0002 a0003c0003 others(3): Show a0001c0001 a0002c0002 a0003c0003 a0005c0005 a0007c0007 a0008c0008	a0001c0001t0004 a0002c0002t0002 a0003c0003t0002 others(12): Show a0001c0001t0004 a0002c0002t0002 a0003c0003t0002 a0003c0003t0004 a0003c0003t0005 a0003c0003t0006 a0005c0005t0001 a0005c0005t0002 a0005c0005t0004 a0007c0007t0002 a0007c0007t0004 a0007c0007t0005 a0007c0007t0006 a0007c0007t0009 a0008c0008t0004	a0001c0001t0004g0148 a0002c0002t0002g0011 a0002c0002t0002g0012 others(33): Show a0001c0001t0004g0148 a0002c0002t0002g0011 a0002c0002t0002g0012 a0003c0003t0002g0042 a0003c0003t0004g0006 a0003c0003t0004g0146 a0003c0003t0005g0046 a0003c0003t0005g0047 a0003c0003t0005g0050 a0003c0003t0006g0112 a0003c0003t0006g0122 a0003c0003t0006g0147 a0005c0005t0001g0211 a0005c0005t0002g0045 a0005c0005t0002g0049 a0005c0005t0004g0005 a0005c0005t0004g0111 a0005c0005t0004g0114 a0005c0005t0004g0118 a0005c0005t0004g0125 a0005c0005t0004g0126 a0005c0005t0004g0128 a0005c0005t0004g0143 a0005c0005t0004g0150 a0007c0007t0002g0107 a0007c0007t0004g0142 a0007c0007t0004g0158 a0007c0007t0004g0159 a0007c0007t0005g0044 a0007c0007t0006g0149 a0007c0007t0006g0151 a0007c0007t0009g0157 a0008c0008t0004g0141 a0008c0008t0004g0144 a0008c0008t0004g0145 a0008c0008t0004g0155	38	304	0.1250	-12	c.142 others(29): Show c.142-5586_142-5575delGTATATATATAT	SNX31	ENSG00000174226.9	transcript	ENST00000311812.7	protein_coding	2/13			chr8	TogoVar
SNX31_chr8_100567889_100654665	100641591	TATATACA others(5): Show TATATACACATAC	T T	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02258.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0015 a0002c0002t0002g0015	1	304	0.0033	-12	c.142 others(29): Show c.142-5592_142-5581delGTATGTGTATAT	SNX31	ENSG00000174226.9	transcript	ENST00000311812.7	protein_coding	2/13			chr8	TogoVar
SNX31_chr8_100567889_100654665	100641625	CATATATA others(5): Show CATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0008 a0008	a0008c0008 a0008c0008	a0008c0008t0001 a0008c0008t0001	a0008c0008t0001g0193 a0008c0008t0001g0193	1	304	0.0033	-12	c.142 others(29): Show c.142-5626_142-5615delATATATATATAT	SNX31	ENSG00000174226.9	transcript	ENST00000311812.7	protein_coding	2/13			chr8	TogoVar
SNX32_chr11_65828963_65858701	65843566	CAAAAGAA others(5): Show CAAAAGAAAAAGA	C C	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG01106.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0247 a0001c0001t0002g0247	1	390	0.0026	-12	c.37- others(27): Show c.37-5896_37-5885delAGAAAAAGAAAA	SNX32	ENSG00000172803.18	transcript	ENST00000308342.7	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr11	TogoVar
SNX33_chr15_75642912_75667301	75645709	TCAGCCTC others(5): Show TCAGCCTCCTGAG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18976.hp1 NA18976.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0070 a0001c0001t0002g0070	1	420	0.0024	-12	c.-33 others(23): Show c.-3393_-3382delCAGCCTCCTGAG	SNX33	ENSG00000173548.9	transcript	ENST00000308527.6	protein_coding		2202		chr15	TogoVar
SNX3_chr6_108206222_108266040	108212882	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG02970.hp2 HG03453.hp2 HG02809.hp2 HG02970.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0227 a0001c0001t0006g0228 a0001c0001t0006g0229 a0001c0001t0006g0227 a0001c0001t0006g0228 a0001c0001t0006g0229	3	356	0.0084	-12	c.384 others(27): Show c.384-640_384-629delAAAAAAAAAAAA	SNX3	ENSG00000112335.15	transcript	ENST00000230085.13	protein_coding	3/3			chr6	TogoVar
SNX3_chr6_108206222_108266040	108246313	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01175.hp1 HG01257.hp1 HG01433.hp2 others(19): Show HG01175.hp1 HG01257.hp1 HG01433.hp2 HG02056.hp1 HG02135.hp2 HG02165.hp1 HG03490.hp2 HG03540.hp2 HG03710.hp2 HG03927.hp1 NA18747.hp1 NA18944.hp1 NA18948.hp1 NA18957.hp1 NA18982.hp1 NA18992.hp1 NA19000.hp2 NA19004.hp2 NA19056.hp2 NA19068.hp2 NA19078.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0005 a0001c0002t0005 a0001c0001t0001 a0001c0001t0005 a0001c0002t0005	a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0209 others(17): Show a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0209 a0001c0001t0001g0239 a0001c0001t0001g0240 a0001c0001t0001g0241 a0001c0001t0001g0242 a0001c0001t0001g0243 a0001c0001t0001g0244 a0001c0001t0001g0245 a0001c0001t0001g0246 a0001c0001t0001g0248 a0001c0001t0001g0249 a0001c0001t0001g0250 a0001c0001t0001g0341 a0001c0001t0005g0015 a0001c0001t0005g0016 a0001c0001t0005g0017 a0001c0002t0005g0013 a0001c0002t0005g0014	22	356	0.0618	-12	c.162 others(31): Show c.162+14435_162+14446delAAAAAAAAAAAA	SNX3	ENSG00000112335.15	transcript	ENST00000230085.13	protein_coding	1/3			chr6	TogoVar
SNX4_chr3_125441650_125525202	125444453	ATTTTTTT others(5): Show ATTTTTTTTTTTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02572.hp2 NA18977.hp2 NA18981.hp2 others(2): Show HG02572.hp2 NA18977.hp2 NA18981.hp2 NA19006.hp1 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0205 a0001c0001t0002g0241 a0001c0001t0002g0255 others(2): Show a0001c0001t0002g0205 a0001c0001t0002g0241 a0001c0001t0002g0255 a0001c0001t0002g0257 a0001c0001t0002g0265	5	360	0.0139	-12	c.33 others(23): Show c.3314_*3325delAAAAAAAAAAAA	SNX4	ENSG00000114520.11	transcript	ENST00000251775.9	protein_coding		2196		chr3	TogoVar
SNX4_chr3_125441650_125525202	125458814	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02132.hp2 NA18939.hp1 NA18942.hp2 others(5): Show HG02132.hp2 NA18939.hp1 NA18942.hp2 NA18950.hp2 NA18961.hp1 NA18963.hp2 NA18986.hp1 NA19064.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0008 a0001c0001t0001g0014 a0001c0001t0001g0039 others(5): Show a0001c0001t0001g0008 a0001c0001t0001g0014 a0001c0001t0001g0039 a0001c0001t0001g0073 a0001c0001t0001g0091 a0001c0001t0001g0093 a0001c0001t0001g0107 a0001c0001t0001g0121	8	360	0.0222	-12	c.945 others(29): Show c.945-1461_945-1450delTTTTTTTTTTTT	SNX4	ENSG00000114520.11	transcript	ENST00000251775.9	protein_coding	10/13			chr3	TogoVar
SNX4_chr3_125441650_125525202	125495250	TTATATAT others(5): Show TTATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0182 a0001c0001t0001g0182	1	360	0.0028	-12	c.597 others(29): Show c.597+2079_597+2090delTATATATATATA	SNX4	ENSG00000114520.11	transcript	ENST00000251775.9	protein_coding	5/13			chr3	TogoVar
SNX5_chr20_17936600_17973794	17956673	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00558.hp1 HG00558.hp2 others(14): Show HG00408.hp1 HG00558.hp1 HG00558.hp2 HG01106.hp2 HG02015.hp1 HG02083.hp1 HG02615.hp2 HG02896.hp1 HG02922.hp2 HG03486.hp1 HG03831.hp1 HG04115.hp2 NA18946.hp1 NA18956.hp1 NA19086.hp1 NA20300.hp1 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0001 a0001c0001t0001 a0001c0002t0001	a0001c0001t0001g0093 a0001c0002t0001g0042 a0001c0002t0001g0044 others(12): Show a0001c0001t0001g0093 a0001c0002t0001g0042 a0001c0002t0001g0044 a0001c0002t0001g0128 a0001c0002t0001g0129 a0001c0002t0001g0130 a0001c0002t0001g0162 a0001c0002t0001g0173 a0001c0002t0001g0184 a0001c0002t0001g0185 a0001c0002t0001g0186 a0001c0002t0001g0198 a0001c0002t0001g0200 a0001c0002t0001g0204 a0001c0002t0001g0206	17	394	0.0432	-12	c.156 others(27): Show c.156+248_156+259delTTTTTTTTTTTT	SNX5	ENSG00000089006.17	transcript	ENST00000377759.9	protein_coding	2/12			chr20	TogoVar
SNX5_chr20_17936600_17973794	17956693	AAAAAAAA others(5): Show AAAAAAAAAAAAC	A A	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01070.hp1 HG01071.hp2 others(13): Show HG00738.hp2 HG01070.hp1 HG01071.hp2 HG01256.hp2 HG01258.hp2 HG01361.hp1 HG02280.hp2 HG02886.hp2 HG03490.hp1 HG03540.hp1 HG03669.hp2 HG03834.hp2 HG03942.hp1 HG04184.hp2 NA20129.hp2 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0008 a0001c0001t0001 a0001c0001t0008	a0001c0001t0001g0010 a0001c0001t0001g0038 a0001c0001t0001g0135 others(8): Show a0001c0001t0001g0010 a0001c0001t0001g0038 a0001c0001t0001g0135 a0001c0001t0001g0137 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0147 a0001c0001t0008g0047	16	394	0.0406	-12	c.156 others(27): Show c.156+228_156+239delGTTTTTTTTTTT	SNX5	ENSG00000089006.17	transcript	ENST00000377759.9	protein_coding	2/12			chr20	TogoVar
SNX6_chr14_34556093_34635148	34557496	ATTCTTCT others(5): Show ATTCTTCTTCTTC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp2 HG00544.hp2 HG01168.hp1 others(7): Show HG00280.hp2 HG00544.hp2 HG01168.hp1 HG03704.hp1 NA18939.hp2 NA18949.hp1 NA18980.hp1 NA19065.hp1 NA19086.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0002t0002 a0001c0002t0012 a0001c0001t0002 a0001c0002t0002 a0001c0002t0012	a0001c0001t0002g0175 a0001c0002t0002g0011 a0001c0002t0002g0098 others(7): Show a0001c0001t0002g0175 a0001c0002t0002g0011 a0001c0002t0002g0098 a0001c0002t0002g0103 a0001c0002t0002g0105 a0001c0002t0002g0107 a0001c0002t0002g0110 a0001c0002t0002g0111 a0001c0002t0002g0125 a0001c0002t0012g0121	10	322	0.0311	-12	c.56 others(23): Show c.5614_*5625delGAAGAAGAAGAA	SNX6	ENSG00000129515.20	transcript	ENST00000362031.10	protein_coding		3596		chr14	TogoVar
SNX6_chr14_34556093_34635148	34558990	TACACACA others(5): Show TACACACACACAC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp2 NA18955.hp1 HG00280.hp2 NA18955.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0002t0002 a0001c0001t0001 a0001c0002t0002	a0001c0001t0001g0142 a0001c0002t0002g0111 a0001c0001t0001g0142 a0001c0002t0002g0111	2	322	0.0062	-12	c.41 others(23): Show c.4120_*4131delGTGTGTGTGTGT	SNX6	ENSG00000129515.20	transcript	ENST00000362031.10	protein_coding		2102		chr14	TogoVar
SNX6_chr14_34556093_34635148	34559028	CACACACA others(5): Show CACACACACACAT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02622.hp2 HG03486.hp2 HG02622.hp2 HG03486.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0004 a0001c0002t0008 a0001c0001t0004 a0001c0002t0008	a0001c0001t0004g0025 a0001c0002t0008g0241 a0001c0001t0004g0025 a0001c0002t0008g0241	2	322	0.0062	-12	c.40 others(23): Show c.4082_*4093delATGTGTGTGTGT	SNX6	ENSG00000129515.20	transcript	ENST00000362031.10	protein_coding		2064		chr14	TogoVar
SNX6_chr14_34556093_34635148	34559030	CACACACA others(5): Show CACACACACATAT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02647.hp1 HG03540.hp1 HG02647.hp1 HG03540.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0026 a0001c0001t0004g0027 a0001c0001t0004g0026 a0001c0001t0004g0027	2	322	0.0062	-12	c.40 others(23): Show c.4080_*4091delATATGTGTGTGT	SNX6	ENSG00000129515.20	transcript	ENST00000362031.10	protein_coding		2062		chr14	TogoVar
SNX6_chr14_34556093_34635148	34563680	ACATGATT others(5): Show ACATGATTTGTTT	A A	intron_variant intron_variant	MODIFIER	NA19086.hp2 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0275 a0001c0001t0013g0275	1	322	0.0031	-12	c.116 others(29): Show c.1168-517_1168-506delAAACAAATCATG	SNX6	ENSG00000129515.20	transcript	ENST00000362031.10	protein_coding	13/13			chr14	TogoVar
SNX6_chr14_34556093_34635148	34578937	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02897.hp2 HG02896.hp2 HG02897.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0072 a0001c0002t0002g0073 a0001c0002t0002g0072 a0001c0002t0002g0073	2	322	0.0062	-12	c.834 others(29): Show c.834+2612_834+2623delTTTTTTTTTTTT	SNX6	ENSG00000129515.20	transcript	ENST00000362031.10	protein_coding	10/13			chr14	TogoVar
SNX6_chr14_34556093_34635148	34601219	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp1 HG00408.hp1 others(229): Show HG00099.hp2 HG00280.hp1 HG00408.hp1 HG00423.hp1 HG00423.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp1 HG00558.hp2 HG00597.hp1 HG00609.hp1 HG00609.hp2 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00673.hp1 HG00733.hp1 HG00733.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01106.hp1 HG01106.hp2 HG01109.hp2 HG01123.hp1 HG01123.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp2 HG01256.hp1 HG01256.hp2 HG01257.hp1 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01261.hp2 HG01346.hp1 HG01346.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01515.hp1 HG01515.hp2 HG01517.hp1 HG01517.hp2 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01981.hp2 HG02015.hp1 HG02015.hp2 HG02040.hp1 HG02040.hp2 HG02055.hp2 HG02074.hp1 HG02074.hp2 HG02080.hp2 HG02083.hp1 HG02109.hp1 HG02109.hp2 HG02132.hp2 HG02145.hp1 HG02155.hp1 HG02165.hp1 HG02165.hp2 HG02258.hp1 HG02280.hp1 HG02280.hp2 HG02486.hp1 HG02523.hp1 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02615.hp2 HG02622.hp2 HG02647.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02698.hp2 HG02717.hp2 HG02735.hp1 HG02735.hp2 HG02818.hp1 HG02818.hp2 HG02886.hp2 HG02895.hp2 HG02896.hp1 HG02970.hp2 HG02976.hp2 HG03017.hp1 HG03017.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03139.hp2 HG03209.hp1 HG03209.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp1 HG03453.hp2 HG03471.hp2 HG03486.hp1 HG03490.hp1 HG03491.hp1 HG03492.hp1 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03654.hp1 HG03654.hp2 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04228.hp1 HG06807.hp2 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp1 NA18940.hp1 NA18940.hp2 NA18941.hp1 NA18941.hp2 NA18942.hp1 NA18946.hp1 NA18949.hp1 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18954.hp1 NA18955.hp1 NA18955.hp2 NA18959.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18970.hp1 NA18970.hp2 NA18974.hp1 NA18974.hp2 NA18975.hp2 NA18979.hp1 NA18979.hp2 NA18980.hp2 NA18983.hp1 NA18983.hp2 NA18985.hp1 NA18985.hp2 NA18991.hp1 NA18994.hp1 NA18994.hp2 NA18995.hp1 NA18999.hp2 NA19000.hp1 NA19000.hp2 NA19004.hp1 NA19005.hp1 NA19007.hp1 NA19009.hp2 NA19010.hp1 NA19012.hp1 NA19012.hp2 NA19030.hp2 NA19054.hp1 NA19060.hp1 NA19060.hp2 NA19065.hp2 NA19066.hp1 NA19066.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp1 NA19070.hp2 NA19077.hp1 NA19080.hp1 NA19080.hp2 NA19086.hp2 NA19090.hp1 NA19240.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20300.hp1 NA20805.hp1 NA20805.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(16): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 a0001c0001t0019 a0001c0001t0020 a0001c0001t0021 a0001c0001t0022 a0001c0002t0002	a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0006 others(229): Show a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0137 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0181 a0001c0001t0001g0182 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0196 a0001c0001t0001g0197 a0001c0001t0001g0198 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0223 a0001c0001t0001g0224 a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0001g0229 a0001c0001t0001g0230 a0001c0001t0001g0231 a0001c0001t0001g0233 a0001c0001t0001g0235 a0001c0001t0001g0236 a0001c0001t0001g0237 a0001c0001t0001g0242 a0001c0001t0001g0243 a0001c0001t0001g0247 a0001c0001t0001g0248 a0001c0001t0001g0249 a0001c0001t0001g0250 a0001c0001t0001g0251 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0254 a0001c0001t0001g0255 a0001c0001t0001g0257 a0001c0001t0001g0258 a0001c0001t0001g0259 a0001c0001t0001g0260 a0001c0001t0001g0261 a0001c0001t0001g0262 a0001c0001t0001g0263 a0001c0001t0001g0264 a0001c0001t0001g0265 a0001c0001t0001g0267 a0001c0001t0001g0310 a0001c0001t0001g0314 a0001c0001t0002g0049 a0001c0001t0002g0050 a0001c0001t0002g0087 a0001c0001t0002g0088 a0001c0001t0002g0175 a0001c0001t0002g0311 a0001c0001t0002g0312 a0001c0001t0003g0083 a0001c0001t0003g0232 a0001c0001t0003g0269 a0001c0001t0003g0270 a0001c0001t0003g0271 a0001c0001t0003g0273 a0001c0001t0003g0274 a0001c0001t0003g0276 a0001c0001t0003g0279 a0001c0001t0003g0280 a0001c0001t0003g0281 a0001c0001t0003g0282 a0001c0001t0003g0283 a0001c0001t0003g0284 a0001c0001t0003g0285 a0001c0001t0003g0286 a0001c0001t0003g0287 a0001c0001t0003g0290 a0001c0001t0003g0291 a0001c0001t0003g0293 a0001c0001t0003g0294 a0001c0001t0003g0295 a0001c0001t0003g0297 a0001c0001t0003g0298 a0001c0001t0003g0299 a0001c0001t0003g0300 a0001c0001t0003g0301 a0001c0001t0003g0302 a0001c0001t0003g0303 a0001c0001t0003g0304 a0001c0001t0003g0305 a0001c0001t0003g0306 a0001c0001t0003g0307 a0001c0001t0003g0309 a0001c0001t0004g0012 a0001c0001t0004g0013 a0001c0001t0004g0014 a0001c0001t0004g0015 a0001c0001t0004g0016 a0001c0001t0004g0017 a0001c0001t0004g0018 a0001c0001t0004g0019 a0001c0001t0004g0020 a0001c0001t0004g0021 a0001c0001t0004g0022 a0001c0001t0004g0023 a0001c0001t0004g0024 a0001c0001t0004g0025 a0001c0001t0004g0026 a0001c0001t0004g0027 a0001c0001t0004g0028 a0001c0001t0004g0029 a0001c0001t0004g0030 a0001c0001t0004g0047 a0001c0001t0004g0048 a0001c0001t0004g0067 a0001c0001t0004g0085 a0001c0001t0004g0086 a0001c0001t0004g0089 a0001c0001t0004g0090 a0001c0001t0004g0091 a0001c0001t0004g0234 a0001c0001t0005g0031 a0001c0001t0005g0033 a0001c0001t0005g0034 a0001c0001t0005g0052 a0001c0001t0005g0053 a0001c0001t0005g0245 a0001c0001t0009g0246 a0001c0001t0009g0268 a0001c0001t0009g0292 a0001c0001t0010g0277 a0001c0001t0010g0278 a0001c0001t0011g0288 a0001c0001t0011g0308 a0001c0001t0013g0275 a0001c0001t0014g0289 a0001c0001t0015g0266 a0001c0001t0016g0158 a0001c0001t0017g0256 a0001c0001t0018g0203 a0001c0001t0019g0313 a0001c0001t0020g0272 a0001c0001t0021g0319 a0001c0001t0022g0320 a0001c0002t0002g0066 a0001c0002t0002g0078 a0001c0002t0002g0079 a0001c0002t0002g0080 a0001c0002t0002g0081 a0001c0002t0002g0082 a0001c0002t0002g0084 a0001c0002t0002g0131	232	322	0.7205	-12	c.516 others(29): Show c.516+2117_516+2128delAAAAAAAAAAAA	SNX6	ENSG00000129515.20	transcript	ENST00000362031.10	protein_coding	6/13			chr14	TogoVar
SNX6_chr14_34556093_34635148	34617607	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00408.hp1 HG00558.hp1 others(79): Show HG00280.hp1 HG00408.hp1 HG00558.hp1 HG00609.hp2 HG00639.hp1 HG00673.hp1 HG00735.hp1 HG00741.hp1 HG01074.hp1 HG01099.hp1 HG01106.hp1 HG01123.hp1 HG01192.hp1 HG01261.hp1 HG01346.hp1 HG01978.hp1 HG01981.hp1 HG02015.hp1 HG02015.hp2 HG02040.hp1 HG02040.hp2 HG02080.hp2 HG02083.hp1 HG02132.hp2 HG02145.hp1 HG02155.hp1 HG02165.hp2 HG02523.hp1 HG02602.hp1 HG02683.hp1 HG02683.hp2 HG02735.hp1 HG02818.hp1 HG03017.hp1 HG03239.hp1 HG03453.hp2 HG03491.hp1 HG03704.hp2 HG03927.hp1 HG04115.hp1 HG04184.hp1 NA18612.hp1 NA18747.hp2 NA18939.hp1 NA18940.hp1 NA18946.hp1 NA18949.hp1 NA18950.hp2 NA18951.hp1 NA18955.hp1 NA18959.hp1 NA18960.hp2 NA18961.hp1 NA18961.hp2 NA18962.hp2 NA18966.hp1 NA18966.hp2 NA18967.hp1 NA18970.hp1 NA18970.hp2 NA18974.hp1 NA18979.hp1 NA18980.hp2 NA18983.hp1 NA18983.hp2 NA18985.hp1 NA18994.hp2 NA19000.hp1 NA19004.hp1 NA19005.hp1 NA19009.hp2 NA19010.hp1 NA19054.hp1 NA19060.hp1 NA19060.hp2 NA19066.hp1 NA19066.hp2 NA19068.hp1 NA19070.hp1 NA19080.hp2 NA19090.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0016 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0016 a0001c0001t0022	a0001c0001t0001g0003 a0001c0001t0001g0009 a0001c0001t0001g0075 others(79): Show a0001c0001t0001g0003 a0001c0001t0001g0009 a0001c0001t0001g0075 a0001c0001t0001g0077 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0142 a0001c0001t0001g0143 a0001c0001t0001g0144 a0001c0001t0001g0145 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0150 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0191 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0195 a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0223 a0001c0001t0001g0224 a0001c0001t0001g0225 a0001c0001t0001g0226 a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0001g0233 a0001c0001t0001g0235 a0001c0001t0001g0236 a0001c0001t0001g0237 a0001c0001t0001g0242 a0001c0001t0001g0243 a0001c0001t0001g0314 a0001c0001t0002g0175 a0001c0001t0016g0158 a0001c0001t0022g0320	82	322	0.2547	-12	c.55- others(27): Show c.55-7877_55-7866delTTTTTTTTTTTT	SNX6	ENSG00000129515.20	transcript	ENST00000362031.10	protein_coding	2/13			chr14	TogoVar
SNX7_chr1_98656721_98765500	98663252	GGTTTTTT others(5): Show GGTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG02300.hp1 HG02615.hp2 NA18973.hp1 HG02300.hp1 HG02615.hp2 NA18973.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0002c0003t0001 a0001c0001t0001 a0002c0003t0001	a0001c0001t0001g0011 a0001c0001t0001g0275 a0002c0003t0001g0119 a0001c0001t0001g0011 a0001c0001t0001g0275 a0002c0003t0001g0119	3	378	0.0079	-12	c.180 others(29): Show c.180+1342_180+1353delGTTTTTTTTTTT	SNX7	ENSG00000162627.17	transcript	ENST00000306121.8	protein_coding	1/8			chr1	TogoVar
SNX7_chr1_98656721_98765500	98677978	TGTGTGTG others(5): Show TGTGTGTGTGTGC	T T	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02451.hp2 HG02970.hp1 others(2): Show HG01891.hp1 HG02451.hp2 HG02970.hp1 HG03516.hp2 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0121 a0001c0001t0001g0125 others(1): Show a0001c0001t0001g0005 a0001c0001t0001g0121 a0001c0001t0001g0125 a0001c0001t0001g0128	5	378	0.0132	-12	c.181 others(29): Show c.181-6895_181-6884delCGTGTGTGTGTG	SNX7	ENSG00000162627.17	transcript	ENST00000306121.8	protein_coding	1/8		INFO_REALIGN_3_PRIME	chr1	TogoVar
SNX7_chr1_98656721_98765500	98763454	ATATATAT others(5): Show ATATATATATATG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01109.hp2 HG01109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0356 a0001c0001t0001g0356	1	378	0.0027	-12	c.33 others(23): Show c.3324_*3335delTATATATATATG	SNX7	ENSG00000162627.17	transcript	ENST00000306121.8	protein_coding		2955		chr1	TogoVar
SNX8_chr7_2246770_2319441	2267299	GCCCTCTC others(5): Show GCCCTCTCCCTCC	G G	intron_variant intron_variant	MODIFIER	HG01496.hp2 HG01496.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0005 a0002c0004t0005	a0002c0004t0005g0366 a0002c0004t0005g0366	1	370	0.0027	-12	c.621 others(29): Show c.621+2248_621+2259delGGAGGGAGAGGG	SNX8	ENSG00000106266.11	transcript	ENST00000222990.8	protein_coding	5/10			chr7	TogoVar

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