view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SPTBN1_chr2_54451327_54676446 | 54465639 | CATATATA others(5): Show |
C | intron_variant | MODIFIER | HG02155.hp2 HG03209.hp1 |
a0001 | a0001c0001a0001c0013 | a0001c0001t0002a0001c0013t0015 | a0001c0001t0002g0225 a0001c0013t0015g0255 |
2 | 370 | 0.0054 | -12 | c.-48 others(29): Show |
SPTBN1 | ENSG00000115306.17 | transcript | ENST00000356805.9 | protein_coding | 1/35 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPTBN1_chr2_54451327_54676446 | 54466561 | CAAAAAAA others(5): Show |
C | intron_variant | MODIFIER | NA18994.hp1 | a0001 | a0001c0001 | a0001c0001t0007 | a0001c0001t0007g0347 | 1 | 370 | 0.0027 | -12 | c.-48 others(31): Show |
SPTBN1 | ENSG00000115306.17 | transcript | ENST00000356805.9 | protein_coding | 1/35 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPTBN1_chr2_54451327_54676446 | 54481391 | AGTGTGTG others(5): Show |
A | intron_variant | MODIFIER | HG01109.hp2 HG01167.hp2 HG01255.hp2 others(20): Show |
a0001a0002a0010 | a0001c0001a0001c0003a0001c0004others(4): Show | a0001c0001t0003a0001c0003t0003a0001c0004t0004others(5): Show | a0001c0001t0003g0059 a0001c0001t0003g0060 a0001c0001t0003g0061 others(20): Show |
23 | 370 | 0.0622 | -12 | c.-48 others(31): Show |
SPTBN1 | ENSG00000115306.17 | transcript | ENST00000356805.9 | protein_coding | 1/35 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPTBN1_chr2_54451327_54676446 | 54506123 | CTAAATAA others(5): Show |
C | intron_variant | MODIFIER | HG00735.hp1 HG01106.hp2 HG01167.hp1 others(11): Show |
a0001 | a0001c0002a0001c0007a0001c0009others(2): Show | a0001c0002t0001a0001c0007t0013a0001c0009t0002others(6): Show | a0001c0002t0001g0275 a0001c0007t0013g0108 a0001c0007t0013g0137 others(11): Show |
14 | 370 | 0.0378 | -12 | c.-47 others(31): Show |
SPTBN1 | ENSG00000115306.17 | transcript | ENST00000356805.9 | protein_coding | 1/35 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPTBN1_chr2_54451327_54676446 | 54533349 | AGTGTGTG others(5): Show |
A | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00280.hp1 others(39): Show |
a0001a0002a0003 | a0001c0003a0001c0011a0001c0026others(2): Show | a0001c0003t0003a0001c0003t0004a0001c0003t0024others(8): Show | a0001c0003t0003g0036 a0001c0003t0003g0037 a0001c0003t0003g0073 others(39): Show |
42 | 370 | 0.1135 | -12 | c.148 others(29): Show |
SPTBN1 | ENSG00000115306.17 | transcript | ENST00000356805.9 | protein_coding | 2/35 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPTBN1_chr2_54451327_54676446 | 54571546 | TACACACA others(5): Show |
T | intron_variant | MODIFIER | NA18978.hp2 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0086 | 1 | 370 | 0.0027 | -12 | c.149 others(31): Show |
SPTBN1 | ENSG00000115306.17 | transcript | ENST00000356805.9 | protein_coding | 2/35 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPTBN1_chr2_54451327_54676446 | 54571564 | CACACACA others(5): Show |
C | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00280.hp1 others(38): Show |
a0001a0003a0009 | a0001c0001a0001c0003a0001c0005others(5): Show | a0001c0001t0003a0001c0001t0007a0001c0001t0044others(13): Show | a0001c0001t0003g0223 a0001c0001t0007g0196 a0001c0001t0007g0270 others(38): Show |
41 | 370 | 0.1108 | -12 | c.149 others(31): Show |
SPTBN1 | ENSG00000115306.17 | transcript | ENST00000356805.9 | protein_coding | 2/35 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPTBN1_chr2_54451327_54676446 | 54581577 | CTTTTTTT others(5): Show |
C | intron_variant | MODIFIER | NA19084.hp1 | a0001 | a0001c0015 | a0001c0015t0002 | a0001c0015t0002g0212 | 1 | 370 | 0.0027 | -12 | c.149 others(31): Show |
SPTBN1 | ENSG00000115306.17 | transcript | ENST00000356805.9 | protein_coding | 2/35 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
SPTBN4_chr19_40462001_40581464 | 40483955 | ATCGCAAA others(5): Show |
A | intron_variant | MODIFIER | HG01123.hp1 HG01884.hp1 HG02135.hp1 others(16): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0002a0001c0008others(7): Show | a0001c0001t0001a0001c0002t0003a0001c0008t0001others(8): Show | a0001c0001t0001g0047 a0001c0001t0001g0048 a0001c0002t0003g0163 others(16): Show |
19 | 234 | 0.0812 | -12 | c.170 others(29): Show |
SPTBN4 | ENSG00000160460.17 | transcript | ENST00000598249.6 | protein_coding | 2/35 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SPTBN4_chr19_40462001_40581464 | 40498373 | TTTTATTT others(5): Show |
T | intron_variant | MODIFIER | HG01261.hp1 HG01358.hp2 HG02559.hp1 others(1): Show |
a0001a0002a0005 | a0001c0002a0002c0019a0005c0026 | a0001c0002t0005a0002c0019t0001a0005c0026t0001 | a0001c0002t0005g0193 a0002c0019t0001g0043 a0002c0019t0001g0162 others(1): Show |
4 | 234 | 0.0171 | -12 | c.784 others(27): Show |
SPTBN4 | ENSG00000160460.17 | transcript | ENST00000598249.6 | protein_coding | 7/35 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SPTBN4_chr19_40462001_40581464 | 40505700 | GAGGAAGG others(5): Show |
G | intron_variant | MODIFIER | HG02258.hp1 HG02723.hp2 |
a0004a0020 | a0004c0007a0020c0050 | a0004c0007t0010a0020c0050t0001 | a0004c0007t0010g0136 a0020c0050t0001g0023 |
2 | 234 | 0.0086 | -12 | c.166 others(29): Show |
SPTBN4 | ENSG00000160460.17 | transcript | ENST00000598249.6 | protein_coding | 12/35 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SPTBN4_chr19_40462001_40581464 | 40531464 | GTTTTTTT others(5): Show |
G | intron_variant | MODIFIER | HG00621.hp1 HG00642.hp1 HG00738.hp1 others(21): Show |
a0001a0004a0016 | a0001c0001a0001c0010a0001c0038others(2): Show | a0001c0001t0001a0001c0010t0008a0001c0038t0001others(2): Show | a0001c0001t0001g0013 a0001c0001t0001g0019 a0001c0001t0001g0027 others(21): Show |
24 | 234 | 0.1026 | -12 | c.394 others(31): Show |
SPTBN4 | ENSG00000160460.17 | transcript | ENST00000598249.6 | protein_coding | 18/35 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SPTBN4_chr19_40462001_40581464 | 40558911 | AATTATTA others(5): Show |
A | intron_variant | MODIFIER | HG01255.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0128 | 1 | 234 | 0.0043 | -12 | c.567 others(31): Show |
SPTBN4 | ENSG00000160460.17 | transcript | ENST00000598249.6 | protein_coding | 26/35 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SPTBN4_chr19_40462001_40581464 | 40567298 | AAAATAAA others(5): Show |
A | intron_variant | MODIFIER | HG03516.hp2 NA18974.hp1 |
a0001a0008 | a0001c0001a0008c0013 | a0001c0001t0001a0008c0013t0001 | a0001c0001t0001g0195 a0008c0013t0001g0143 |
2 | 234 | 0.0086 | -12 | c.633 others(29): Show |
SPTBN4 | ENSG00000160460.17 | transcript | ENST00000598249.6 | protein_coding | 30/35 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SPTBN4_chr19_40462001_40581464 | 40569936 | CCACACAC others(5): Show |
C | intron_variant | MODIFIER | HG02976.hp1 | a0007 | a0007c0053 | a0007c0053t0001 | a0007c0053t0001g0094 | 1 | 234 | 0.0043 | -12 | c.702 others(29): Show |
SPTBN4 | ENSG00000160460.17 | transcript | ENST00000598249.6 | protein_coding | 32/35 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SPTBN4_chr19_40462001_40581464 | 40569963 | CACACACA others(5): Show |
C | intron_variant | MODIFIER | HG02615.hp1 HG02895.hp2 |
a0001a0004 | a0001c0010a0004c0025 | a0001c0010t0001a0004c0025t0001 | a0001c0010t0001g0093 a0004c0025t0001g0056 |
2 | 234 | 0.0086 | -12 | c.702 others(29): Show |
SPTBN4 | ENSG00000160460.17 | transcript | ENST00000598249.6 | protein_coding | 32/35 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | ||||||
SPTB_chr14_64741283_64884907 | 64765809 | TGTGTGTG others(5): Show |
T | intron_variant | MODIFIER | HG02615.hp1 HG03453.hp2 |
a0009 | a0009c0020 | a0009c0020t0001 | a0009c0020t0001g0194 a0009c0020t0001g0196 |
2 | 268 | 0.0075 | -12 | c.634 others(29): Show |
SPTB | ENSG00000070182.21 | transcript | ENST00000644917.1 | protein_coding | 32/35 | chr14 | TogoVar | |||||||
SPTB_chr14_64741283_64884907 | 64791565 | CAAAAAAA others(5): Show |
C | intron_variant | MODIFIER | NA18983.hp1 | a0029 | a0029c0034 | a0029c0034t0002 | a0029c0034t0002g0237 | 1 | 268 | 0.0037 | -12 | c.280 others(29): Show |
SPTB | ENSG00000070182.21 | transcript | ENST00000644917.1 | protein_coding | 15/35 | chr14 | TogoVar | |||||||
SPTB_chr14_64741283_64884907 | 64830334 | CTTATTAT others(5): Show |
C | intron_variant | MODIFIER | HG02735.hp1 HG03486.hp2 HG03704.hp1 others(4): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0009a0001c0014others(4): Show | a0001c0001t0035a0001c0009t0001a0001c0014t0004others(4): Show | a0001c0001t0035g0025 a0001c0009t0001g0009 a0001c0014t0004g0091 others(4): Show |
7 | 268 | 0.0261 | -12 | c.-51 others(29): Show |
SPTB | ENSG00000070182.21 | transcript | ENST00000644917.1 | protein_coding | 1/35 | chr14 | TogoVar | |||||||
SPTB_chr14_64741283_64884907 | 64854324 | GCTGGAGT others(5): Show |
G | intron_variant | MODIFIER | HG00597.hp2 HG00609.hp1 HG01192.hp2 others(20): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0002a0001c0009others(6): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(12): Show | a0001c0001t0001g0008 a0001c0001t0003g0007 a0001c0001t0006g0012 others(20): Show |
23 | 268 | 0.0858 | -12 | c.-52 others(31): Show |
SPTB | ENSG00000070182.21 | transcript | ENST00000644917.1 | protein_coding | 1/35 | chr14 | TogoVar | |||||||
SPTB_chr14_64741283_64884907 | 64859710 | CTCTCTCT others(5): Show |
C | intron_variant | MODIFIER | HG02257.hp2 | a0004 | a0004c0019 | a0004c0019t0001 | a0004c0019t0001g0045 | 1 | 268 | 0.0037 | -12 | c.-52 others(31): Show |
SPTB | ENSG00000070182.21 | transcript | ENST00000644917.1 | protein_coding | 1/35 | chr14 | TogoVar | |||||||
SPTB_chr14_64741283_64884907 | 64859712 | CTCTCTCT others(5): Show |
C | intron_variant | MODIFIER | HG01192.hp2 HG01243.hp2 HG02055.hp2 others(2): Show |
a0001a0004a0016 | a0001c0002a0004c0019a0004c0051others(1): Show | a0001c0002t0001a0004c0019t0001a0004c0051t0001others(1): Show | a0001c0002t0001g0040 a0004c0019t0001g0042 a0004c0019t0001g0044 others(2): Show |
5 | 268 | 0.0187 | -12 | c.-52 others(31): Show |
SPTB | ENSG00000070182.21 | transcript | ENST00000644917.1 | protein_coding | 1/35 | chr14 | TogoVar | |||||||
SPTLC1_chr9_92026147_92120413 | 92038967 | TAAAACAA others(5): Show |
T | intron_variant | MODIFIER | NA18985.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0099 | 1 | 358 | 0.0028 | -12 | c.113 others(29): Show |
SPTLC1 | ENSG00000090054.16 | transcript | ENST00000262554.7 | protein_coding | 12/14 | chr9 | TogoVar | |||||||
SPTLC1_chr9_92026147_92120413 | 92045524 | TAAAAAAA others(5): Show |
T | intron_variant | MODIFIER | HG01081.hp2 HG02895.hp2 HG03209.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0020 a0001c0001t0001g0063 a0001c0001t0001g0064 |
4 | 358 | 0.0112 | -12 | c.113 others(29): Show |
SPTLC1 | ENSG00000090054.16 | transcript | ENST00000262554.7 | protein_coding | 12/14 | chr9 | TogoVar | |||||||
SPTLC2_chr14_77500997_77621637 | 77513016 | CTTTTTTT others(5): Show |
C | intron_variant | MODIFIER | HG01891.hp1 HG02818.hp2 |
a0001 | a0001c0002 | a0001c0002t0010 | a0001c0002t0010g0066 a0001c0002t0010g0067 |
2 | 246 | 0.0081 | -12 | c.157 others(29): Show |
SPTLC2 | ENSG00000100596.8 | transcript | ENST00000216484.7 | protein_coding | 11/11 | chr14 | TogoVar | |||||||
SPTLC2_chr14_77500997_77621637 | 77515542 | CTTTTTTT others(5): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00280.hp2 others(142): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0009others(24): Show | a0001c0001t0001g0001 a0001c0001t0001g0009 a0001c0001t0001g0010 others(141): Show |
145 | 246 | 0.5894 | -12 | c.156 others(31): Show |
SPTLC2 | ENSG00000100596.8 | transcript | ENST00000216484.7 | protein_coding | 11/11 | chr14 | TogoVar | |||||||
SPTLC2_chr14_77500997_77621637 | 77541015 | TTTTATTT others(5): Show |
T | intron_variant | MODIFIER | HG01168.hp1 NA19043.hp2 |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0032 | a0001c0001t0005g0074 a0001c0001t0032g0205 |
2 | 246 | 0.0081 | -12 | c.130 others(33): Show |
SPTLC2 | ENSG00000100596.8 | transcript | ENST00000216484.7 | protein_coding | 9/11 | chr14 | TogoVar | |||||||
SPTLC2_chr14_77500997_77621637 | 77564287 | AAGGAGGA others(5): Show |
A | intron_variant | MODIFIER | HG00621.hp1 HG00642.hp1 HG00733.hp1 others(58): Show |
a0001 | a0001c0001a0001c0003a0001c0005others(2): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(18): Show | a0001c0001t0001g0010 a0001c0001t0001g0022 a0001c0001t0001g0023 others(58): Show |
61 | 246 | 0.2480 | -12 | c.757 others(29): Show |
SPTLC2 | ENSG00000100596.8 | transcript | ENST00000216484.7 | protein_coding | 5/11 | chr14 | TogoVar | |||||||
SPTLC2_chr14_77500997_77621637 | 77564400 | TACACACA others(5): Show |
T | intron_variant | MODIFIER | HG00642.hp1 HG00738.hp1 HG01109.hp1 others(25): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(4): Show | a0001c0001t0001g0010 a0001c0001t0001g0022 a0001c0001t0001g0023 others(25): Show |
28 | 246 | 0.1138 | -12 | c.757 others(29): Show |
SPTLC2 | ENSG00000100596.8 | transcript | ENST00000216484.7 | protein_coding | 5/11 | chr14 | TogoVar | |||||||
SPTLC2_chr14_77500997_77621637 | 77588996 | CAAAAAAA others(5): Show |
C | intron_variant | MODIFIER | NA19030.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0130 | 1 | 246 | 0.0041 | -12 | c.327 others(29): Show |
SPTLC2 | ENSG00000100596.8 | transcript | ENST00000216484.7 | protein_coding | 2/11 | chr14 | TogoVar | |||||||
SPTLC3_chr20_13003972_13174103 | 13027641 | GCACACAC others(5): Show |
G | intron_variant | MODIFIER | HG00609.hp2 HG01891.hp1 HG02280.hp2 others(5): Show |
a0001 | a0001c0001a0001c0003a0001c0005 | a0001c0001t0003a0001c0003t0011a0001c0005t0001others(4): Show | a0001c0001t0003g0135 a0001c0003t0011g0082 a0001c0005t0001g0080 others(5): Show |
8 | 292 | 0.0274 | -12 | c.117 others(31): Show |
SPTLC3 | ENSG00000172296.13 | transcript | ENST00000399002.7 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
SPTLC3_chr20_13003972_13174103 | 13044995 | CCACACAC others(5): Show |
C | intron_variant | MODIFIER | HG01168.hp1 HG01192.hp1 HG03041.hp2 |
a0001 | a0001c0001 | a0001c0001t0022a0001c0001t0027 | a0001c0001t0022g0129 a0001c0001t0022g0130 a0001c0001t0027g0268 |
3 | 292 | 0.0103 | -12 | c.118 others(29): Show |
SPTLC3 | ENSG00000172296.13 | transcript | ENST00000399002.7 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
SPTLC3_chr20_13003972_13174103 | 13064284 | GTTTTGTT others(5): Show |
G | intron_variant | MODIFIER | HG02258.hp1 HG02451.hp1 |
a0001a0005 | a0001c0001a0005c0011 | a0001c0001t0021a0005c0011t0023 | a0001c0001t0021g0064 a0005c0011t0023g0166 |
2 | 292 | 0.0069 | -12 | c.304 others(29): Show |
SPTLC3 | ENSG00000172296.13 | transcript | ENST00000399002.7 | protein_coding | 2/11 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
SPTLC3_chr20_13003972_13174103 | 13067044 | CATATATA others(5): Show |
C | intron_variant | MODIFIER | NA18957.hp2 NA19086.hp1 NA19089.hp1 |
a0002 | a0002c0002a0002c0018 | a0002c0002t0002a0002c0018t0002 | a0002c0002t0002g0029 a0002c0002t0002g0062 a0002c0018t0002g0054 |
3 | 292 | 0.0103 | -12 | c.304 others(29): Show |
SPTLC3 | ENSG00000172296.13 | transcript | ENST00000399002.7 | protein_coding | 2/11 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | ||||||
SPTSSA_chr14_34427788_34467240 | 34443134 | GGTGTGTG others(5): Show |
G | intron_variant | MODIFIER | HG02572.hp1 HG02886.hp1 HG03516.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0016 | a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 others(2): Show |
5 | 344 | 0.0145 | -12 | c.113 others(29): Show |
SPTSSA | ENSG00000165389.7 | transcript | ENST00000298130.5 | protein_coding | 1/1 | chr14 | TogoVar | |||||||
SPTSSA_chr14_34427788_34467240 | 34443506 | GGTGTGTG others(5): Show |
G | intron_variant | MODIFIER | HG01243.hp2 HG04184.hp1 |
a0001 | a0001c0001 | a0001c0001t0003a0001c0001t0008 | a0001c0001t0003g0111 a0001c0001t0008g0131 |
2 | 344 | 0.0058 | -12 | c.113 others(29): Show |
SPTSSA | ENSG00000165389.7 | transcript | ENST00000298130.5 | protein_coding | 1/1 | chr14 | TogoVar | |||||||
SPTSSA_chr14_34427788_34467240 | 34462894 | GCACACAC others(5): Show |
G | upstream_gene_variant | MODIFIER | HG00639.hp1 NA18747.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0018 | a0001c0001t0001g0185 a0001c0001t0018g0012 |
2 | 344 | 0.0058 | -12 | c.-69 others(21): Show |
SPTSSA | ENSG00000165389.7 | transcript | ENST00000298130.5 | protein_coding | 655 | chr14 | TogoVar | |||||||
SPTSSA_chr14_34427788_34467240 | 34462930 | ACACACAC others(5): Show |
A | upstream_gene_variant | MODIFIER | HG01192.hp1 HG02559.hp1 HG02647.hp1 others(10): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0089 a0001c0001t0001g0091 a0001c0001t0001g0096 others(10): Show |
13 | 344 | 0.0378 | -12 | c.-73 others(21): Show |
SPTSSA | ENSG00000165389.7 | transcript | ENST00000298130.5 | protein_coding | 691 | chr14 | TogoVar | |||||||
SPTSSA_chr14_34427788_34467240 | 34467217 | AACACACA others(5): Show |
A | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00423.hp2 HG00438.hp1 others(58): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(6): Show | a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0129 others(57): Show |
61 | 344 | 0.1773 | -12 | c.-50 others(23): Show |
SPTSSA | ENSG00000165389.7 | transcript | ENST00000298130.5 | protein_coding | 4978 | chr14 | TogoVar | |||||||
SPTSSB_chr3_161339798_161376517 | 161351601 | GAGAGAGA others(5): Show |
G | intron_variant | MODIFIER | HG02074.hp2 HG04184.hp2 NA18612.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0229 a0001c0001t0001g0233 a0001c0001t0001g0234 others(1): Show |
4 | 412 | 0.0097 | -12 | c.-32 others(29): Show |
SPTSSB | ENSG00000196542.9 | transcript | ENST00000620149.2 | protein_coding | 2/2 | chr3 | TogoVar | |||||||
SPTSSB_chr3_161339798_161376517 | 161369306 | CTTTCTTT others(5): Show |
C | intron_variant | MODIFIER | HG03239.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0180 | 1 | 412 | 0.0024 | -12 | c.-12 others(31): Show |
SPTSSB | ENSG00000196542.9 | transcript | ENST00000620149.2 | protein_coding | 1/2 | chr3 | TogoVar | |||||||
SPTSSB_chr3_161339798_161376517 | 161369308 | TTCTTTCT others(5): Show |
T | intron_variant | MODIFIER | HG01255.hp1 | a0001 | a0001c0001 | a0001c0001t0015 | a0001c0001t0015g0074 | 1 | 412 | 0.0024 | -12 | c.-12 others(31): Show |
SPTSSB | ENSG00000196542.9 | transcript | ENST00000620149.2 | protein_coding | 1/2 | chr3 | TogoVar | |||||||
SPTSSB_chr3_161339798_161376517 | 161369310 | CTTTCTCT others(5): Show |
C | intron_variant | MODIFIER | HG03834.hp2 | a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0278 | 1 | 412 | 0.0024 | -12 | c.-12 others(31): Show |
SPTSSB | ENSG00000196542.9 | transcript | ENST00000620149.2 | protein_coding | 1/2 | chr3 | TogoVar | |||||||
SPTSSB_chr3_161339798_161376517 | 161369385 | CTTTTTTT others(5): Show |
C | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00280.hp1 others(74): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0012a0001c0001t0021 | a0001c0001t0001g0001 a0001c0001t0001g0004 a0001c0001t0001g0005 others(37): Show |
77 | 412 | 0.1869 | -12 | c.-12 others(31): Show |
SPTSSB | ENSG00000196542.9 | transcript | ENST00000620149.2 | protein_coding | 1/2 | chr3 | TogoVar | |||||||
SPTY2D1_chr11_18601403_18639342 | 18621323 | CAGAAAAG others(5): Show |
C | intron_variant | MODIFIER | HG01255.hp2 HG01496.hp1 HG02109.hp2 others(14): Show |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0008 a0001c0001t0003g0016 a0001c0001t0003g0017 others(9): Show |
17 | 444 | 0.0383 | -12 | c.61- others(27): Show |
SPTY2D1 | ENSG00000179119.15 | transcript | ENST00000336349.6 | protein_coding | 1/5 | chr11 | TogoVar | |||||||
SPX_chr12_21521296_21537947 | 21534539 | AAGAAATA others(5): Show |
A | downstream_gene_variant | MODIFIER | HG01361.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0007 | 1 | 428 | 0.0023 | -12 | c.*33 others(23): Show |
SPX | ENSG00000134548.11 | transcript | ENST00000256969.7 | protein_coding | 1593 | chr12 | TogoVar | |||||||
SQLE_chr8_124993505_125027283 | 125001478 | GTGTGTGT others(5): Show |
G | intron_variant | MODIFIER | HG02015.hp1 HG04115.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0049 | 2 | 378 | 0.0053 | -12 | c.292 others(29): Show |
SQLE | ENSG00000104549.12 | transcript | ENST00000265896.10 | protein_coding | 1/10 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
SQOR_chr15_45630029_45696281 | 45683892 | TTTTGTTT others(5): Show |
T | intron_variant | MODIFIER | HG03710.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0096 | 1 | 340 | 0.0029 | -12 | c.104 others(31): Show |
SQOR | ENSG00000137767.14 | transcript | ENST00000260324.12 | protein_coding | 7/9 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
SQSTM1_chr5_179815905_179843078 | 179823445 | CAAAAAAA others(5): Show |
C | intron_variant | MODIFIER | HG01891.hp2 NA18963.hp2 |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0002 | a0001c0001t0001g0232 a0001c0002t0002g0097 |
2 | 462 | 0.0043 | -12 | c.302 others(27): Show |
SQSTM1 | ENSG00000161011.20 | transcript | ENST00000389805.9 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr5 | TogoVar | ||||||
SRBD1_chr2_45383680_45616267 | 45415345 | CATATAGT others(5): Show |
C | intron_variant | MODIFIER | NA18950.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0328 | 1 | 358 | 0.0028 | -12 | c.233 others(31): Show |
SRBD1 | ENSG00000068784.13 | transcript | ENST00000263736.5 | protein_coding | 18/20 | chr2 | TogoVar |