Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
TRAPPC8_chr18_31824197_31948128	31943298	TGGGCGGG others(5): Show TGGGCGGGGGCGG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01109.hp1 HG01884.hp1 HG02055.hp1 others(19): Show HG01109.hp1 HG01884.hp1 HG02055.hp1 HG02109.hp1 HG02145.hp2 HG02572.hp2 HG02622.hp1 HG02809.hp2 HG02818.hp2 HG02895.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp2 HG02970.hp1 HG03225.hp1 HG03516.hp2 HG03540.hp2 HG03654.hp2 NA19030.hp1 NA19030.hp2 NA19240.hp1	a0001 a0003 a0004 others(1): Show a0001 a0003 a0004 a0012	a0001c0001 a0003c0006 a0004c0008 others(1): Show a0001c0001 a0003c0006 a0004c0008 a0012c0021	a0001c0001t0001 a0001c0001t0005 a0001c0001t0013 others(3): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0013 a0003c0006t0001 a0004c0008t0001 a0012c0021t0001	a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 others(19): Show a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0287 a0001c0001t0005g0018 a0001c0001t0013g0001 a0003c0006t0001g0276 a0003c0006t0001g0277 a0004c0008t0001g0025 a0012c0021t0001g0275	22	316	0.0696	-12	c.-54 others(21): Show c.-546_-535delCCGCCCCCGCCC		TRAPPC8	ENSG00000153339.15	transcript	ENST00000283351.10	protein_coding					171		chr18	TogoVar
TRAPPC9_chr8_139722725_140462744	139732844	CCCTGCCA others(5): Show CCCTGCCAGGCAG	C C	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02809.hp1 HG02896.hp2 others(2): Show HG02109.hp2 HG02809.hp1 HG02896.hp2 HG02897.hp1 HG02922.hp2	a0001 a0001	a0001c0002 a0001c0003 a0001c0004 others(1): Show a0001c0002 a0001c0003 a0001c0004 a0001c0020	a0001c0002t0007 a0001c0003t0007 a0001c0004t0010 others(1): Show a0001c0002t0007 a0001c0003t0007 a0001c0004t0010 a0001c0020t0007	a0001c0002t0007g0022 a0001c0003t0007g0037 a0001c0004t0010g0089 others(2): Show a0001c0002t0007g0022 a0001c0003t0007g0037 a0001c0004t0010g0089 a0001c0004t0010g0090 a0001c0020t0007g0030	5	96	0.0521	-12	c.305 others(29): Show c.3056-654_3056-643delCTGCCTGGCAGG		TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	21/22						chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	139784608	CATATATA others(5): Show CATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG01192.hp2 HG01496.hp1 HG00733.hp1 HG01192.hp2 HG01496.hp1	a0001 a0002 a0001 a0002	a0001c0006 a0001c0025 a0002c0023 a0001c0006 a0001c0025 a0002c0023	a0001c0006t0006 a0001c0025t0006 a0002c0023t0006 a0001c0006t0006 a0001c0025t0006 a0002c0023t0006	a0001c0006t0006g0031 a0001c0025t0006g0032 a0002c0023t0006g0035 a0001c0006t0006g0031 a0001c0025t0006g0032 a0002c0023t0006g0035	3	8	0.3750	-12	c.305 others(33): Show c.3056-52418_3056-52407delATATATATATAT		TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	21/22						chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	139785537	AACACACA others(5): Show AACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG01070.hp2 HG01071.hp1 others(6): Show HG00738.hp1 HG01070.hp2 HG01071.hp1 HG02451.hp1 HG02896.hp1 HG03098.hp2 HG03139.hp2 HG03195.hp1 NA18906.hp1	a0001 a0005 a0006 a0001 a0005 a0006	a0001c0001 a0001c0002 a0001c0004 others(2): Show a0001c0001 a0001c0002 a0001c0004 a0005c0021 a0006c0010	a0001c0001t0001 a0001c0002t0002 a0001c0004t0001 others(2): Show a0001c0001t0001 a0001c0002t0002 a0001c0004t0001 a0005c0021t0002 a0006c0010t0002	a0001c0001t0001g0068 a0001c0001t0001g0070 a0001c0001t0001g0075 others(6): Show a0001c0001t0001g0068 a0001c0001t0001g0070 a0001c0001t0001g0075 a0001c0001t0001g0081 a0001c0002t0002g0001 a0001c0002t0002g0009 a0001c0004t0001g0086 a0005c0021t0002g0029 a0006c0010t0002g0002	9	38	0.2368	-12	c.305 others(33): Show c.3056-53347_3056-53336delGTGTGTGTGTGT		TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	21/22						chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	139796085	AAGGAGGA others(5): Show AAGGAGGAGGAAG	A A	intron_variant intron_variant	MODIFIER	HG03942.hp2 NA21309.hp1 HG03942.hp2 NA21309.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0007c0017 a0001c0001 a0007c0017	a0001c0001t0001 a0007c0017t0001 a0001c0001t0001 a0007c0017t0001	a0001c0001t0001g0053 a0007c0017t0001g0062 a0001c0001t0001g0053 a0007c0017t0001g0062	2	96	0.0208	-12	c.305 others(33): Show c.3056-63895_3056-63884delCTTCCTCCTCCT		TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	21/22						chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	139948248	AACACACA others(5): Show AACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG01106.hp2 HG02486.hp1 HG02976.hp2 others(3): Show HG01106.hp2 HG02486.hp1 HG02976.hp2 HG03098.hp1 HG03139.hp1 NA18906.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0001c0004 a0001c0014 others(1): Show a0001c0001 a0001c0004 a0001c0014 a0006c0010	a0001c0001t0001 a0001c0001t0029 a0001c0004t0001 others(3): Show a0001c0001t0001 a0001c0001t0029 a0001c0004t0001 a0001c0004t0028 a0001c0014t0001 a0006c0010t0002	a0001c0001t0001g0058 a0001c0001t0029g0077 a0001c0004t0001g0093 others(3): Show a0001c0001t0001g0058 a0001c0001t0029g0077 a0001c0004t0001g0093 a0001c0004t0028g0098 a0001c0014t0001g0074 a0006c0010t0002g0002	6	17	0.3529	-12	c.281 others(33): Show c.2811-37960_2811-37949delGTGTGTGTGTGT		TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	19/22						chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	140033658	GTTTTTTT others(5): Show GTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG02109.hp2 HG02895.hp1 others(1): Show HG00738.hp1 HG02109.hp2 HG02895.hp1 HG02976.hp2	a0001 a0001	a0001c0003 a0001c0004 a0001c0005 a0001c0003 a0001c0004 a0001c0005	a0001c0003t0007 a0001c0004t0001 a0001c0004t0028 others(1): Show a0001c0003t0007 a0001c0004t0001 a0001c0004t0028 a0001c0005t0030	a0001c0003t0007g0037 a0001c0004t0001g0086 a0001c0004t0028g0098 others(1): Show a0001c0003t0007g0037 a0001c0004t0001g0086 a0001c0004t0028g0098 a0001c0005t0030g0063	4	32	0.1250	-12	c.255 others(31): Show c.2557-9591_2557-9580delAAAAAAAAAAAA		TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	17/22						chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	140045631	GAAAAAAA others(5): Show GAAAAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0075 a0001c0001t0001g0075	1	60	0.0167	-12	c.255 others(33): Show c.2557-21564_2557-21553delTTTTTTTTTTTT		TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	17/22						chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	140052211	AAACAACA others(5): Show AAACAACAACAAC	A A	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02109.hp1 HG02615.hp1 others(7): Show HG02055.hp1 HG02109.hp1 HG02615.hp1 HG02723.hp1 HG02809.hp1 HG02886.hp2 HG02896.hp1 HG02922.hp2 HG03041.hp1 NA19240.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0001c0003 others(5): Show a0001c0001 a0001c0002 a0001c0003 a0001c0006 a0001c0007 a0001c0015 a0001c0020 a0003c0011	a0001c0001t0001 a0001c0002t0007 a0001c0003t0002 others(6): Show a0001c0001t0001 a0001c0002t0007 a0001c0003t0002 a0001c0003t0005 a0001c0006t0005 a0001c0007t0002 a0001c0015t0032 a0001c0020t0007 a0003c0011t0004	a0001c0001t0001g0067 a0001c0001t0001g0081 a0001c0002t0007g0022 others(7): Show a0001c0001t0001g0067 a0001c0001t0001g0081 a0001c0002t0007g0022 a0001c0003t0002g0020 a0001c0003t0005g0017 a0001c0006t0005g0014 a0001c0007t0002g0027 a0001c0015t0032g0066 a0001c0020t0007g0030 a0003c0011t0004g0091	10	31	0.3226	-12	c.255 others(33): Show c.2557-28144_2557-28133delGTTGTTGTTGTT		TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	17/22						chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	140144464	TTTCATTC others(5): Show TTTCATTCATTCA	T T	intron_variant intron_variant	MODIFIER	HG00735.hp2 HG00738.hp2 HG00735.hp2 HG00738.hp2	a0001 a0001	a0001c0002 a0001c0004 a0001c0002 a0001c0004	a0001c0002t0002 a0001c0004t0001 a0001c0002t0002 a0001c0004t0001	a0001c0002t0002g0003 a0001c0004t0001g0085 a0001c0002t0002g0003 a0001c0004t0001g0085	2	19	0.1053	-12	c.255 others(33): Show c.2556+76983_2556+76994delTGAATGAATGAA		TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	17/22						chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	140183952	GGGAGGGG others(5): Show GGGAGGGGAGGGA	G G	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00733.hp2 HG01433.hp2 others(2): Show HG00140.hp2 HG00733.hp2 HG01433.hp2 HG02109.hp1 HG02809.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0015 a0001c0001 a0001c0002 a0001c0015	a0001c0001t0001 a0001c0002t0002 a0001c0002t0003 others(1): Show a0001c0001t0001 a0001c0002t0002 a0001c0002t0003 a0001c0015t0032	a0001c0001t0001g0060 a0001c0001t0001g0073 a0001c0002t0002g0013 others(2): Show a0001c0001t0001g0060 a0001c0001t0001g0073 a0001c0002t0002g0013 a0001c0002t0003g0008 a0001c0015t0032g0066	5	95	0.0526	-12	c.255 others(33): Show c.2556+37495_2556+37506delTCCCTCCCCTCC		TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	17/22						chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	140244699	TCCTTCAT others(5): Show TCCTTCATGAAAA	T T	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG01884.hp1 HG02717.hp1 others(1): Show HG01255.hp1 HG01884.hp1 HG02717.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0009 others(1): Show a0001c0001 a0001c0002 a0001c0009 a0001c0012	a0001c0001t0029 a0001c0002t0013 a0001c0009t0005 others(1): Show a0001c0001t0029 a0001c0002t0013 a0001c0009t0005 a0001c0012t0001	a0001c0001t0029g0077 a0001c0002t0013g0005 a0001c0009t0005g0010 others(1): Show a0001c0001t0029g0077 a0001c0002t0013g0005 a0001c0009t0005g0010 a0001c0012t0001g0092	4	96	0.0417	-12	c.243 others(31): Show c.2431+8066_2431+8077delTTTTCATGAAGG		TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	16/22						chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	140289174	AGTGTGTG others(5): Show AGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00639.hp2 HG00733.hp1 others(22): Show HG00140.hp1 HG00639.hp2 HG00733.hp1 HG01069.hp1 HG01071.hp2 HG01109.hp2 HG01192.hp2 HG01255.hp2 HG01496.hp1 HG01891.hp2 HG02055.hp1 HG02293.hp2 HG02809.hp2 HG02895.hp1 HG02897.hp2 HG02976.hp1 HG03098.hp1 HG03195.hp2 HG03209.hp2 HG03225.hp1 HG03942.hp1 NA19010.hp1 NA19030.hp2 NA19240.hp1 NA20300.hp1	a0001 a0002 a0001 a0002	a0001c0002 a0001c0003 a0001c0005 others(7): Show a0001c0002 a0001c0003 a0001c0005 a0001c0006 a0001c0007 a0001c0014 a0001c0019 a0001c0024 a0001c0025 a0002c0023	a0001c0002t0002 a0001c0003t0001 a0001c0003t0002 others(16): Show a0001c0002t0002 a0001c0003t0001 a0001c0003t0002 a0001c0003t0003 a0001c0003t0011 a0001c0003t0014 a0001c0003t0020 a0001c0005t0004 a0001c0005t0008 a0001c0005t0009 a0001c0005t0030 a0001c0006t0002 a0001c0006t0006 a0001c0007t0015 a0001c0014t0001 a0001c0019t0031 a0001c0024t0016 a0001c0025t0006 a0002c0023t0006	a0001c0002t0002g0013 a0001c0003t0001g0052 a0001c0003t0002g0016 others(22): Show a0001c0002t0002g0013 a0001c0003t0001g0052 a0001c0003t0002g0016 a0001c0003t0002g0018 a0001c0003t0002g0020 a0001c0003t0002g0043 a0001c0003t0002g0046 a0001c0003t0003g0045 a0001c0003t0011g0011 a0001c0003t0014g0026 a0001c0003t0020g0047 a0001c0005t0004g0055 a0001c0005t0008g0065 a0001c0005t0008g0076 a0001c0005t0009g0057 a0001c0005t0030g0063 a0001c0006t0002g0033 a0001c0006t0002g0034 a0001c0006t0006g0031 a0001c0007t0015g0015 a0001c0014t0001g0074 a0001c0019t0031g0056 a0001c0024t0016g0049 a0001c0025t0006g0032 a0002c0023t0006g0035	25	31	0.8065	-12	c.185 others(31): Show c.1855-1452_1855-1441delACACACACACAC		TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	12/22						chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	140349356	GGGAAGGG others(5): Show GGGAAGGGCGCGC	G G	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01069.hp2 HG01106.hp2 others(6): Show HG00735.hp1 HG01069.hp2 HG01106.hp2 HG01169.hp1 HG01433.hp1 HG01433.hp2 HG02055.hp2 HG02886.hp1 HG04115.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0004 others(2): Show a0001c0001 a0001c0002 a0001c0004 a0001c0022 a0001c0027	a0001c0001t0001 a0001c0002t0003 a0001c0002t0022 others(3): Show a0001c0001t0001 a0001c0002t0003 a0001c0002t0022 a0001c0004t0004 a0001c0022t0002 a0001c0027t0012	a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0073 others(6): Show a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0073 a0001c0002t0003g0007 a0001c0002t0003g0041 a0001c0002t0022g0006 a0001c0004t0004g0087 a0001c0022t0002g0040 a0001c0027t0012g0012	9	96	0.0938	-12	c.149 others(33): Show c.1495+10682_1495+10693delGCGCGCCCTTCC		TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	9/22						chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	140404884	ATGTGTGC others(5): Show ATGTGTGCACGTG	A A	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00639.hp2 HG01192.hp1 others(11): Show HG00140.hp2 HG00639.hp2 HG01192.hp1 HG01433.hp2 HG01496.hp2 HG02293.hp2 HG03209.hp1 HG03225.hp2 HG03490.hp1 HG03942.hp2 NA19010.hp1 NA19010.hp2 NA20300.hp1 NA21309.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0001c0003 a0001c0004 others(6): Show a0001c0001 a0001c0003 a0001c0004 a0001c0005 a0001c0008 a0001c0018 a0001c0019 a0001c0026 a0007c0017	a0001c0001t0001 a0001c0003t0002 a0001c0004t0004 others(8): Show a0001c0001t0001 a0001c0003t0002 a0001c0004t0004 a0001c0004t0033 a0001c0005t0004 a0001c0005t0009 a0001c0008t0018 a0001c0018t0001 a0001c0019t0031 a0001c0026t0002 a0007c0017t0001	a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0060 others(11): Show a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0060 a0001c0001t0001g0073 a0001c0003t0002g0043 a0001c0004t0004g0094 a0001c0004t0033g0084 a0001c0005t0004g0055 a0001c0005t0009g0057 a0001c0008t0018g0023 a0001c0018t0001g0096 a0001c0019t0031g0056 a0001c0026t0002g0048 a0007c0017t0001g0062	14	96	0.1458	-12	c.100 others(29): Show c.1008+681_1008+692delCACGTGCACACA		TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	6/22						chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	140418723	AAGATAGA others(5): Show AAGATAGATAGAT	A A	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0004 a0001c0004t0004	a0001c0004t0004g0094 a0001c0004t0004g0094	1	57	0.0175	-12	c.886 others(29): Show c.886+7880_886+7891delATCTATCTATCT		TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	5/22						chr8	TogoVar
TRAPPC9_chr8_139722725_140462744	140418763	TAGATAGA others(5): Show TAGATAGATAGAC	T T	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0007 a0001c0003t0007	a0001c0003t0007g0037 a0001c0003t0007g0037	1	96	0.0104	-12	c.886 others(29): Show c.886+7840_886+7851delGTCTATCTATCT		TRAPPC9	ENSG00000167632.18	transcript	ENST00000438773.4	protein_coding	5/22						chr8	TogoVar
TRARG1_chr17_1274662_1305978	1275837	TATGAGAG others(5): Show TATGAGAGTGTGA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19081.hp2 NA19081.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0037 a0001c0001t0011g0037	1	400	0.0025	-12	c.-41 others(23): Show c.-4164_-4153delATGAGAGTGTGA		TRARG1	ENSG00000184811.4	transcript	ENST00000333813.4	protein_coding					3824		chr17	TogoVar
TRARG1_chr17_1274662_1305978	1279581	GCACACGC others(5): Show GCACACGCACACA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02486.hp2 NA18906.hp2 HG02486.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0039 a0001c0001t0008 a0001c0001t0039	a0001c0001t0008g0048 a0001c0001t0039g0048 a0001c0001t0008g0048 a0001c0001t0039g0048	2	397	0.0050	-12	c.-42 others(21): Show c.-420_-409delCACACGCACACA		TRARG1	ENSG00000184811.4	transcript	ENST00000333813.4	protein_coding					80		chr17	TogoVar
TRARG1_chr17_1274662_1305978	1279587	GCACACAC others(5): Show GCACACACACACA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0277 a0001c0001t0006g0277	1	79	0.0127	-12	c.-41 others(21): Show c.-414_-403delCACACACACACA		TRARG1	ENSG00000184811.4	transcript	ENST00000333813.4	protein_coding					74		chr17	TogoVar
TRARG1_chr17_1274662_1305978	1282212	ACGTATAC others(5): Show ACGTATACACGTG	A A	intron_variant intron_variant	MODIFIER	HG03225.hp1 HG03225.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0055 a0003c0003t0055	a0003c0003t0055g0109 a0003c0003t0055g0109	1	391	0.0026	-12	c.387 others(29): Show c.387+1831_387+1842delCACGTGCGTATA		TRARG1	ENSG00000184811.4	transcript	ENST00000333813.4	protein_coding	1/2					INFO_REALIGN_3_PRIME	chr17	TogoVar
TRARG1_chr17_1274662_1305978	1284122	AAAAGAAA others(5): Show AAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG02818.hp1 HG02818.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0238 a0001c0001t0004g0238	1	259	0.0039	-12	c.387 others(29): Show c.387+3746_387+3757delGAAAGAAAGAAA		TRARG1	ENSG00000184811.4	transcript	ENST00000333813.4	protein_coding	1/2					INFO_REALIGN_3_PRIME	chr17	TogoVar
TRARG1_chr17_1274662_1305978	1297592	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00323.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0037 a0003c0003t0037	a0003c0003t0037g0110 a0003c0003t0037g0110	1	242	0.0041	-12	c.521 others(27): Show c.521-644_521-633delTTTTTTTTTTTT		TRARG1	ENSG00000184811.4	transcript	ENST00000333813.4	protein_coding	2/2					INFO_REALIGN_3_PRIME	chr17	TogoVar
TRAT1_chr3_108817786_108860005	108819718	CCTCTCTC others(5): Show CCTCTCTCTCTCT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00438.hp1 HG00609.hp1 HG00609.hp2 others(24): Show HG00438.hp1 HG00609.hp1 HG00609.hp2 HG00741.hp1 HG01123.hp1 HG01243.hp1 HG01433.hp1 HG01884.hp2 HG01934.hp2 HG01975.hp1 HG02004.hp1 HG02056.hp2 HG02165.hp1 HG02273.hp2 HG02615.hp2 HG02630.hp2 HG02698.hp2 HG02895.hp2 HG03654.hp2 HG03704.hp1 HG03710.hp2 NA18939.hp2 NA18961.hp1 NA18978.hp1 NA18986.hp1 NA19010.hp2 NA19077.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0001 a0001c0001t0002 a0001c0001t0004	a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0015 others(18): Show a0001c0001t0001g0001 a0001c0001t0001g0007 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0058 a0001c0001t0001g0067 a0001c0001t0001g0069 a0001c0001t0001g0079 a0001c0001t0001g0097 a0001c0001t0001g0101 a0001c0001t0001g0103 a0001c0001t0001g0163 a0001c0001t0002g0021 a0001c0001t0002g0100 a0001c0001t0002g0104 a0001c0001t0002g0113 a0001c0001t0002g0114 a0001c0001t0002g0161 a0001c0001t0004g0109 a0001c0001t0004g0110 a0001c0001t0004g0111	27	150	0.1800	-12	c.-32 others(23): Show c.-3209_-3198delCTCTCTCTCTCT		TRAT1	ENSG00000163519.14	transcript	ENST00000295756.11	protein_coding					3067		chr3	TogoVar
TRAT1_chr3_108817786_108860005	108819751	CTCTCTCT others(5): Show CTCTCTCTCTCTA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00438.hp2 NA18962.hp1 HG00438.hp2 NA18962.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0091 a0001c0001t0001g0162 a0001c0001t0001g0091 a0001c0001t0001g0162	2	332	0.0060	-12	c.-31 others(23): Show c.-3176_-3165delTCTCTCTCTCTA		TRAT1	ENSG00000163519.14	transcript	ENST00000295756.11	protein_coding					3034		chr3	TogoVar
TRAT1_chr3_108817786_108860005	108819753	CTCTCTCT others(5): Show CTCTCTCTCTATA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA20129.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0120 a0001c0001t0013g0120	1	333	0.0030	-12	c.-31 others(23): Show c.-3174_-3163delTCTCTCTCTATA		TRAT1	ENSG00000163519.14	transcript	ENST00000295756.11	protein_coding					3032		chr3	TogoVar
TRAT1_chr3_108817786_108860005	108828871	TTGAAAAC others(5): Show TTGAAAACATAAC	T T	intron_variant intron_variant	MODIFIER	HG00597.hp2 HG00642.hp2 HG00733.hp1 others(18): Show HG00597.hp2 HG00642.hp2 HG00733.hp1 HG00735.hp2 HG01257.hp2 HG01258.hp1 HG02602.hp1 HG02735.hp1 HG03490.hp1 HG03490.hp2 HG03492.hp1 HG03516.hp1 HG03704.hp1 HG03927.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 NA18945.hp2 NA18950.hp2 NA18951.hp1 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0010	a0001c0001t0001g0026 a0001c0001t0001g0105 a0001c0001t0001g0149 others(11): Show a0001c0001t0001g0026 a0001c0001t0001g0105 a0001c0001t0001g0149 a0001c0001t0001g0208 a0001c0001t0002g0104 a0001c0001t0002g0138 a0001c0001t0003g0002 a0001c0001t0003g0250 a0001c0001t0003g0251 a0001c0001t0003g0252 a0001c0001t0003g0253 a0001c0001t0003g0254 a0001c0001t0004g0054 a0001c0001t0010g0249	21	338	0.0621	-12	c.8-1 others(25): Show c.8-1796_8-1785delAAAACATAACTG		TRAT1	ENSG00000163519.14	transcript	ENST00000295756.11	protein_coding	1/5					INFO_REALIGN_3_PRIME	chr3	TogoVar
TRAT1_chr3_108817786_108860005	108835895	GTATTTAT others(5): Show GTATTTATTTATT	G G	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01069.hp2 HG01071.hp1 others(53): Show HG00735.hp1 HG01069.hp2 HG01071.hp1 HG01081.hp1 HG01106.hp2 HG01109.hp2 HG01192.hp1 HG01243.hp2 HG01433.hp2 HG01515.hp1 HG01516.hp2 HG01891.hp2 HG01981.hp2 HG02055.hp1 HG02055.hp2 HG02109.hp2 HG02257.hp1 HG02257.hp2 HG02486.hp1 HG02622.hp1 HG02630.hp1 HG02647.hp2 HG02683.hp1 HG02683.hp2 HG02717.hp1 HG02717.hp2 HG02723.hp2 HG02809.hp1 HG02818.hp1 HG02818.hp2 HG02886.hp1 HG02886.hp2 HG02922.hp1 HG02965.hp2 HG02970.hp1 HG03041.hp2 HG03098.hp1 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp1 HG03209.hp1 HG03225.hp2 HG03453.hp1 HG03453.hp2 HG03486.hp1 HG03486.hp2 HG03688.hp1 HG04228.hp2 HG06807.hp2 NA19030.hp2 NA19240.hp2 NA20129.hp2 NA20300.hp1 NA20300.hp2 NA21309.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0002 a0004c0004 a0001c0001 a0002c0002 a0004c0004	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0012 a0001c0001t0013 a0002c0002t0002 a0004c0004t0008	a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 others(47): Show a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0068 a0001c0001t0001g0074 a0001c0001t0001g0132 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0122 a0001c0001t0002g0126 a0001c0001t0002g0130 a0001c0001t0002g0139 a0001c0001t0002g0153 a0001c0001t0002g0165 a0001c0001t0002g0233 a0001c0001t0002g0234 a0001c0001t0003g0242 a0001c0001t0004g0009 a0001c0001t0004g0014 a0001c0001t0004g0066 a0001c0001t0004g0115 a0001c0001t0004g0119 a0001c0001t0004g0121 a0001c0001t0004g0129 a0001c0001t0005g0261 a0001c0001t0006g0027 a0001c0001t0006g0125 a0001c0001t0006g0156 a0001c0001t0006g0157 a0001c0001t0006g0158 a0001c0001t0007g0198 a0001c0001t0007g0199 a0001c0001t0007g0202 a0001c0001t0007g0203 a0001c0001t0007g0204 a0001c0001t0007g0239 a0001c0001t0012g0070 a0001c0001t0013g0120 a0002c0002t0002g0022 a0002c0002t0002g0040 a0002c0002t0002g0117 a0002c0002t0002g0123 a0002c0002t0002g0127 a0002c0002t0002g0226 a0002c0002t0002g0237 a0004c0004t0008g0051 a0004c0004t0008g0052 a0004c0004t0008g0065	56	67	0.8358	-12	c.119 others(29): Show c.119-3009_119-2998delATTTATTTATTT		TRAT1	ENSG00000163519.14	transcript	ENST00000295756.11	protein_coding	2/5					INFO_REALIGN_3_PRIME	chr3	TogoVar
TRDN_chr6_123211339_123641950	123223672	TCTTCCTT others(5): Show TCTTCCTTCCTTC	T T	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG02970.hp1 HG03139.hp2 HG02922.hp1 HG02970.hp1 HG03139.hp2	a0003 a0015 a0024 a0003 a0015 a0024	a0003c0003 a0015c0015 a0024c0026 a0003c0003 a0015c0015 a0024c0026	a0003c0003t0012 a0015c0015t0001 a0024c0026t0017 a0003c0003t0012 a0015c0015t0001 a0024c0026t0017	a0003c0003t0012g0133 a0015c0015t0001g0002 a0024c0026t0017g0096 a0003c0003t0012g0133 a0015c0015t0001g0002 a0024c0026t0017g0096	3	50	0.0600	-12	c.201 others(29): Show c.2014+409_2014+420delGAAGGAAGGAAG		TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	39/40						chr6	TogoVar
TRDN_chr6_123211339_123641950	123301758	TATATATA others(5): Show TATATATATATAC	T T	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00423.hp1 HG00621.hp1 others(22): Show HG00323.hp2 HG00423.hp1 HG00621.hp1 HG00621.hp2 HG01106.hp2 HG01123.hp1 HG01981.hp1 HG02056.hp2 HG02135.hp1 HG02135.hp2 HG02257.hp2 HG02293.hp1 HG02523.hp2 HG03579.hp1 HG03654.hp2 HG03942.hp2 NA18747.hp1 NA18944.hp1 NA18955.hp2 NA18962.hp2 NA18989.hp2 NA18995.hp2 NA18998.hp2 NA18999.hp2 NA19084.hp1	a0001 a0002 a0009 others(2): Show a0001 a0002 a0009 a0012 a0018	a0001c0001 a0001c0002 a0002c0005 others(4): Show a0001c0001 a0001c0002 a0002c0005 a0009c0011 a0012c0017 a0012c0035 a0018c0023	a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 others(8): Show a0001c0001t0001 a0001c0001t0003 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0002c0005t0001 a0002c0005t0003 a0009c0011t0001 a0012c0017t0002 a0012c0035t0002 a0018c0023t0003	a0001c0001t0001g0075 a0001c0001t0003g0047 a0001c0002t0001g0030 others(22): Show a0001c0001t0001g0075 a0001c0001t0003g0047 a0001c0002t0001g0030 a0001c0002t0001g0052 a0001c0002t0001g0054 a0001c0002t0001g0105 a0001c0002t0002g0037 a0001c0002t0002g0121 a0001c0002t0003g0042 a0001c0002t0003g0044 a0001c0002t0003g0062 a0001c0002t0003g0065 a0001c0002t0003g0080 a0001c0002t0003g0088 a0001c0002t0003g0102 a0001c0002t0003g0120 a0001c0002t0003g0132 a0002c0005t0001g0063 a0002c0005t0003g0057 a0002c0005t0003g0059 a0009c0011t0001g0031 a0009c0011t0001g0130 a0012c0017t0002g0028 a0012c0035t0002g0012 a0018c0023t0003g0039	25	150	0.1667	-12	c.151 others(33): Show c.1510+14687_1510+14698delGTATATATATAT		TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	24/40						chr6	TogoVar
TRDN_chr6_123211339_123641950	123322613	TTTATTAT others(5): Show TTTATTATTATTA	T T	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG02109.hp2 HG02523.hp1 others(7): Show HG00639.hp2 HG02109.hp2 HG02523.hp1 HG02735.hp1 HG03098.hp1 HG03130.hp2 HG03704.hp1 HG03942.hp1 HG04228.hp1 NA20905.hp2	a0001 a0002 a0004 others(2): Show a0001 a0002 a0004 a0006 a0010	a0001c0001 a0001c0002 a0002c0005 others(3): Show a0001c0001 a0001c0002 a0002c0005 a0004c0006 a0006c0009 a0010c0012	a0001c0001t0004 a0001c0002t0001 a0002c0005t0002 others(5): Show a0001c0001t0004 a0001c0002t0001 a0002c0005t0002 a0004c0006t0001 a0006c0009t0002 a0006c0009t0003 a0010c0012t0001 a0010c0012t0002	a0001c0001t0004g0140 a0001c0002t0001g0139 a0002c0005t0002g0108 others(7): Show a0001c0001t0004g0140 a0001c0002t0001g0139 a0002c0005t0002g0108 a0002c0005t0002g0112 a0004c0006t0001g0101 a0006c0009t0002g0106 a0006c0009t0003g0110 a0010c0012t0001g0113 a0010c0012t0002g0045 a0010c0012t0002g0111	10	36	0.2778	-12	c.147 others(31): Show c.1472-6130_1472-6119delTAATAATAATAA		TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	23/40						chr6	TogoVar
TRDN_chr6_123211339_123641950	123356503	TTATATAT others(5): Show TTATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG02717.hp2 NA18944.hp2 NA19043.hp2 HG02717.hp2 NA18944.hp2 NA19043.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0003 a0003c0003t0004 a0001c0001t0003 a0003c0003t0004	a0001c0001t0003g0078 a0003c0003t0004g0021 a0003c0003t0004g0099 a0001c0001t0003g0078 a0003c0003t0004g0021 a0003c0003t0004g0099	3	18	0.1667	-12	c.132 others(31): Show c.1322-3929_1322-3918delTATATATATATA		TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	20/40						chr6	TogoVar
TRDN_chr6_123211339_123641950	123360708	AGAGAGAG others(5): Show AGAGAGAGAGACG	A A	intron_variant intron_variant	MODIFIER	HG02922.hp1 HG02922.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0012 a0003c0003t0012	a0003c0003t0012g0133 a0003c0003t0012g0133	1	150	0.0067	-12	c.132 others(31): Show c.1321+5415_1321+5426delCGTCTCTCTCTC		TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	20/40						chr6	TogoVar
TRDN_chr6_123211339_123641950	123378453	AGTGTGTG others(5): Show AGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01123.hp2 HG02055.hp2 others(1): Show HG01106.hp1 HG01123.hp2 HG02055.hp2 HG03654.hp1	a0004 a0005 a0016 a0004 a0005 a0016	a0004c0006 a0005c0007 a0016c0021 a0004c0006 a0005c0007 a0016c0021	a0004c0006t0001 a0004c0006t0003 a0005c0007t0001 others(1): Show a0004c0006t0001 a0004c0006t0003 a0005c0007t0001 a0016c0021t0011	a0004c0006t0001g0128 a0004c0006t0003g0082 a0005c0007t0001g0017 others(1): Show a0004c0006t0001g0128 a0004c0006t0003g0082 a0005c0007t0001g0017 a0016c0021t0011g0024	4	17	0.2353	-12	c.118 others(29): Show c.1187-567_1187-556delACACACACACAC		TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	16/40						chr6	TogoVar
TRDN_chr6_123211339_123641950	123425232	GGTGTGTG others(5): Show GGTGTGTGTGTGT	G G	intron_variant intron_variant	MODIFIER	HG04228.hp1 HG04228.hp1	a0006 a0006	a0006c0009 a0006c0009	a0006c0009t0002 a0006c0009t0002	a0006c0009t0002g0106 a0006c0009t0002g0106	1	11	0.0909	-12	c.105 others(33): Show c.1051+12819_1051+12830delACACACACACAC		TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	12/40						chr6	TogoVar
TRDN_chr6_123211339_123641950	123483066	TTTATTAT others(5): Show TTTATTATTATTA	T T	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG03130.hp2 HG02647.hp2 HG03130.hp2	a0001 a0009 a0001 a0009	a0001c0001 a0009c0011 a0001c0001 a0009c0011	a0001c0001t0004 a0009c0011t0004 a0001c0001t0004 a0009c0011t0004	a0001c0001t0004g0140 a0009c0011t0004g0131 a0001c0001t0004g0140 a0009c0011t0004g0131	2	20	0.1000	-12	c.853 others(31): Show c.853+14115_853+14126delTAATAATAATAA		TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	9/40						chr6	TogoVar
TRDN_chr6_123211339_123641950	123505244	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01074.hp1 HG02258.hp2 others(1): Show HG00639.hp2 HG01074.hp1 HG02258.hp2 HG04115.hp1	a0002 a0027 a0002 a0027	a0002c0005 a0027c0024 a0002c0005 a0027c0024	a0002c0005t0002 a0027c0024t0016 a0002c0005t0002 a0027c0024t0016	a0002c0005t0002g0015 a0002c0005t0002g0056 a0002c0005t0002g0108 others(1): Show a0002c0005t0002g0015 a0002c0005t0002g0056 a0002c0005t0002g0108 a0027c0024t0016g0073	4	18	0.2222	-12	c.611 others(29): Show c.611-1355_611-1344delTTTTTTTTTTTT		TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	7/40						chr6	TogoVar
TRDN_chr6_123211339_123641950	123544246	TACACACA others(5): Show TACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG01081.hp1 HG02055.hp1 others(3): Show HG00621.hp2 HG01081.hp1 HG02055.hp1 HG02735.hp1 HG02922.hp2 NA18747.hp2	a0001 a0002 a0005 others(3): Show a0001 a0002 a0005 a0009 a0010 a0023	a0001c0001 a0002c0005 a0005c0007 others(3): Show a0001c0001 a0002c0005 a0005c0007 a0009c0011 a0010c0012 a0023c0032	a0001c0001t0003 a0002c0005t0003 a0005c0007t0004 others(3): Show a0001c0001t0003 a0002c0005t0003 a0005c0007t0004 a0009c0011t0001 a0010c0012t0001 a0023c0032t0011	a0001c0001t0003g0025 a0002c0005t0003g0127 a0005c0007t0004g0115 others(3): Show a0001c0001t0003g0025 a0002c0005t0003g0127 a0005c0007t0004g0115 a0009c0011t0001g0130 a0010c0012t0001g0113 a0023c0032t0011g0100	6	21	0.2857	-12	c.424 others(29): Show c.424+3082_424+3093delGTGTGTGTGTGT		TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	4/40						chr6	TogoVar
TRDN_chr6_123211339_123641950	123563798	GTTTGTTT others(5): Show GTTTGTTTTTGTT	G G	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG02615.hp1 HG01106.hp1 HG02615.hp1	a0004 a0004	a0004c0006 a0004c0006	a0004c0006t0002 a0004c0006t0003 a0004c0006t0002 a0004c0006t0003	a0004c0006t0002g0040 a0004c0006t0003g0082 a0004c0006t0002g0040 a0004c0006t0003g0082	2	150	0.0133	-12	c.232 others(29): Show c.232+7113_232+7124delAACAAAAACAAA		TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	2/40						chr6	TogoVar
TRDN_chr6_123211339_123641950	123574848	TTATATAT others(5): Show TTATATATACATA	T T	intron_variant intron_variant	MODIFIER	HG00423.hp1 HG00544.hp1 HG00544.hp2 others(6): Show HG00423.hp1 HG00544.hp1 HG00544.hp2 HG02886.hp2 HG03139.hp1 HG03209.hp1 HG04115.hp2 NA18906.hp2 NA18998.hp1	a0001 a0003 a0005 others(3): Show a0001 a0003 a0005 a0007 a0012 a0028	a0001c0001 a0001c0002 a0003c0003 others(4): Show a0001c0001 a0001c0002 a0003c0003 a0005c0007 a0007c0010 a0012c0017 a0028c0028	a0001c0001t0001 a0001c0002t0001 a0001c0002t0003 others(5): Show a0001c0001t0001 a0001c0002t0001 a0001c0002t0003 a0003c0003t0002 a0005c0007t0010 a0007c0010t0005 a0012c0017t0002 a0028c0028t0013	a0001c0001t0001g0123 a0001c0002t0001g0033 a0001c0002t0003g0088 others(6): Show a0001c0001t0001g0123 a0001c0002t0001g0033 a0001c0002t0003g0088 a0003c0003t0002g0006 a0003c0003t0002g0008 a0005c0007t0010g0145 a0007c0010t0005g0084 a0012c0017t0002g0119 a0028c0028t0013g0129	9	110	0.0818	-12	c.23- others(27): Show c.23-3728_23-3717delTATGTATATATA		TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	1/40						chr6	TogoVar
TRDN_chr6_123211339_123641950	123574857	CATATATA others(5): Show CATATATATATAT	C C	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0020 a0020	a0020c0030 a0020c0030	a0020c0030t0001 a0020c0030t0001	a0020c0030t0001g0138 a0020c0030t0001g0138	1	101	0.0099	-12	c.23- others(27): Show c.23-3737_23-3726delATATATATATAT		TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	1/40						chr6	TogoVar
TRDN_chr6_123211339_123641950	123574883	TATATATA others(5): Show TATATATATATAC	T T	intron_variant intron_variant	MODIFIER	HG01255.hp2 HG02109.hp2 HG02922.hp2 others(1): Show HG01255.hp2 HG02109.hp2 HG02922.hp2 NA20905.hp1	a0001 a0004 a0023 a0001 a0004 a0023	a0001c0001 a0001c0002 a0004c0006 others(1): Show a0001c0001 a0001c0002 a0004c0006 a0023c0032	a0001c0001t0001 a0001c0002t0003 a0004c0006t0001 others(1): Show a0001c0001t0001 a0001c0002t0003 a0004c0006t0001 a0023c0032t0011	a0001c0001t0001g0018 a0001c0002t0003g0087 a0004c0006t0001g0101 others(1): Show a0001c0001t0001g0018 a0001c0002t0003g0087 a0004c0006t0001g0101 a0023c0032t0011g0100	4	150	0.0267	-12	c.23- others(27): Show c.23-3763_23-3752delGTATATATATAT		TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	1/40						chr6	TogoVar
TRDN_chr6_123211339_123641950	123577330	GTTGTTCC others(5): Show GTTGTTCCCTTCT	G G	intron_variant intron_variant	MODIFIER	HG04115.hp1 HG04115.hp1	a0027 a0027	a0027c0024 a0027c0024	a0027c0024t0016 a0027c0024t0016	a0027c0024t0016g0073 a0027c0024t0016g0073	1	150	0.0067	-12	c.23- others(27): Show c.23-6210_23-6199delAGAAGGGAACAA		TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	1/40						chr6	TogoVar
TRDN_chr6_123211339_123641950	123622336	CACACACA others(5): Show CACACACACACAG	C C	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0021 a0021	a0021c0020 a0021c0020	a0021c0020t0001 a0021c0020t0001	a0021c0020t0001g0026 a0021c0020t0001g0026	1	150	0.0067	-12	c.22+ others(29): Show c.22+14406_22+14417delCTGTGTGTGTGT		TRDN	ENSG00000186439.15	transcript	ENST00000334268.9	protein_coding	1/40						chr6	TogoVar
TREML2_chr6_41184749_41206149	41190851	GTGTCTGT others(5): Show GTGTCTGTCTGTC	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00099.hp2 HG00280.hp1 HG00558.hp1 others(139): Show HG00099.hp2 HG00280.hp1 HG00558.hp1 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00733.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG01069.hp2 HG01081.hp1 HG01099.hp2 HG01123.hp1 HG01123.hp2 HG01175.hp2 HG01192.hp2 HG01255.hp2 HG01256.hp1 HG01257.hp2 HG01358.hp2 HG01433.hp1 HG01496.hp2 HG01515.hp2 HG01516.hp2 HG01517.hp1 HG01891.hp2 HG01928.hp1 HG01928.hp2 HG01943.hp1 HG01975.hp2 HG01978.hp2 HG01993.hp1 HG02027.hp1 HG02055.hp1 HG02071.hp2 HG02074.hp2 HG02135.hp2 HG02148.hp1 HG02148.hp2 HG02257.hp2 HG02273.hp1 HG02280.hp1 HG02300.hp1 HG02523.hp1 HG02615.hp1 HG02717.hp1 HG02723.hp1 HG02735.hp1 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02818.hp2 HG02886.hp1 HG02896.hp1 HG02897.hp1 HG02976.hp2 HG03017.hp1 HG03195.hp1 HG03225.hp1 HG03239.hp1 HG03239.hp2 HG03490.hp2 HG03491.hp2 HG03492.hp2 HG03540.hp1 HG03654.hp2 HG03669.hp1 HG03704.hp2 HG03710.hp1 HG03927.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp1 HG04228.hp2 NA18522.hp2 NA18747.hp2 NA18906.hp1 NA18940.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp2 NA18952.hp2 NA18959.hp1 NA18962.hp2 NA18963.hp2 NA18964.hp2 NA18966.hp1 NA18967.hp1 NA18970.hp2 NA18971.hp1 NA18972.hp1 NA18973.hp2 NA18975.hp2 NA18979.hp1 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18981.hp2 NA18983.hp2 NA18986.hp1 NA18986.hp2 NA18988.hp2 NA18989.hp1 NA18990.hp2 NA18992.hp1 NA18992.hp2 NA18993.hp2 NA18994.hp1 NA18995.hp2 NA18998.hp1 NA19001.hp1 NA19003.hp1 NA19003.hp2 NA19005.hp2 NA19006.hp1 NA19009.hp1 NA19030.hp1 NA19054.hp2 NA19063.hp2 NA19064.hp1 NA19065.hp1 NA19066.hp2 NA19067.hp1 NA19068.hp1 NA19072.hp1 NA19072.hp2 NA19078.hp2 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19082.hp2 NA19085.hp1 NA19088.hp2 NA19090.hp2 NA20129.hp2	a0001 a0002 a0004 others(2): Show a0001 a0002 a0004 a0005 a0008	a0001c0001 a0002c0002 a0002c0004 others(4): Show a0001c0001 a0002c0002 a0002c0004 a0002c0010 a0004c0005 a0005c0006 a0008c0014	a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 others(18): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0002c0002t0002 a0002c0002t0003 a0002c0002t0008 a0002c0002t0015 a0002c0002t0016 a0002c0002t0023 a0002c0002t0025 a0002c0002t0026 a0002c0002t0027 a0002c0002t0031 a0002c0002t0032 a0002c0004t0003 a0002c0004t0008 a0002c0010t0002 a0004c0005t0034 a0005c0006t0021 a0005c0006t0022 a0008c0014t0003	a0001c0001t0002g0086 a0001c0001t0003g0084 a0001c0001t0008g0065 others(41): Show a0001c0001t0002g0086 a0001c0001t0003g0084 a0001c0001t0008g0065 a0002c0002t0002g0001 a0002c0002t0002g0009 a0002c0002t0002g0011 a0002c0002t0002g0029 a0002c0002t0002g0069 a0002c0002t0002g0082 a0002c0002t0002g0093 a0002c0002t0002g0101 a0002c0002t0002g0119 a0002c0002t0002g0121 a0002c0002t0002g0122 a0002c0002t0002g0127 a0002c0002t0002g0128 a0002c0002t0002g0133 a0002c0002t0003g0018 a0002c0002t0003g0030 a0002c0002t0003g0041 a0002c0002t0003g0081 a0002c0002t0003g0090 a0002c0002t0003g0106 a0002c0002t0003g0118 a0002c0002t0003g0125 a0002c0002t0008g0063 a0002c0002t0015g0043 a0002c0002t0016g0048 a0002c0002t0023g0115 a0002c0002t0025g0113 a0002c0002t0026g0114 a0002c0002t0027g0117 a0002c0002t0031g0083 a0002c0002t0032g0089 a0002c0004t0003g0006 a0002c0004t0003g0032 a0002c0004t0003g0054 a0002c0004t0003g0123 a0002c0004t0008g0017 a0002c0010t0002g0110 a0004c0005t0034g0109 a0005c0006t0021g0052 a0005c0006t0022g0053 a0008c0014t0003g0060	142	399	0.3559	-12	c.15 others(23): Show c.1564_*1575delGACAGACAGACA		TREML2	ENSG00000112195.9	transcript	ENST00000483722.2	protein_coding	5/5				1564		chr6	TogoVar
TREML2_chr6_41184749_41206149	41191168	CCTGTGTG others(5): Show CCTGTGTGTGTGT	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02717.hp2 HG02717.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0024 a0001c0001t0024	a0001c0001t0024g0095 a0001c0001t0024g0095	1	427	0.0023	-12	c.12 others(23): Show c.1247_*1258delACACACACACAG		TREML2	ENSG00000112195.9	transcript	ENST00000483722.2	protein_coding	5/5				1247		chr6	TogoVar
TREML4_chr6_41223349_41243882	41243253	CGTGTGTG others(5): Show CGTGTGTGTGTGT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02723.hp2 HG03579.hp1 HG02723.hp2 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0016 a0001c0001t0016	a0001c0001t0016g0013 a0001c0001t0016g0013	2	3	0.6667	-12	c.62 others(23): Show c.6235_*6246delGTGTGTGTGTGT		TREML4	ENSG00000188056.12	transcript	ENST00000341495.7	protein_coding					4372		chr6	TogoVar
TRERF1_chr6_42219931_42456926	42262460	GAGAGAGG others(5): Show GAGAGAGGAGAGA	G G	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0029 a0001c0001t0002g0029	1	176	0.0057	-12	c.188 others(29): Show c.1884+848_1884+859delTCTCTCCTCTCT		TRERF1	ENSG00000124496.13	transcript	ENST00000695948.1	protein_coding	8/17						chr6	TogoVar
TRERF1_chr6_42219931_42456926	42262464	GAGGAGAG others(5): Show GAGGAGAGAGAGA	G G	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02723.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0082 a0001c0001t0010g0082	1	176	0.0057	-12	c.188 others(29): Show c.1884+844_1884+855delTCTCTCTCTCCT		TRERF1	ENSG00000124496.13	transcript	ENST00000695948.1	protein_coding	8/17						chr6	TogoVar
TRERF1_chr6_42219931_42456926	42263500	CGGCGGAG others(5): Show CGGCGGAGGCGGA	C C	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	HG02258.hp2 HG02258.hp2	a0011 a0011	a0011c0019 a0011c0019	a0011c0019t0001 a0011c0019t0001	a0011c0019t0001g0022 a0011c0019t0001g0022	1	178	0.0056	-12	c.169 others(21): Show c.1692_1703delTCCGCCTCCGCC	p.Pro others(13): Show p.Pro565_Pro568del	TRERF1	ENSG00000124496.13	transcript	ENST00000695948.1	protein_coding	8/18	2494/7844	1692/3639	564/1212			chr6	TogoVar

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