Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
VPS53_chr17_503668_719839	662834	AAAGGAAG others(5): Show AAAGGAAGGAAGG	A A	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp2 HG03516.hp1 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0081 a0001c0002t0075 a0001c0001t0081 a0001c0002t0075	a0001c0001t0081g0046 a0001c0002t0075g0041 a0001c0001t0081g0046 a0001c0002t0075g0041	2	95	0.0211	-12	c.286 others(27): Show c.286-951_286-940delCCTTCCTTCCTT	VPS53	ENSG00000141252.21	transcript	ENST00000437048.7	protein_coding	4/21			chr17	TogoVar
VPS53_chr17_503668_719839	662891	AAGGCAGG others(5): Show AAGGCAGGCAGGC	A A	intron_variant intron_variant	MODIFIER	NA19065.hp1 NA19065.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0007 a0001c0002t0007	a0001c0002t0007g0081 a0001c0002t0007g0081	1	204	0.0049	-12	c.286 others(28): Show c.286-1008_286-997delGCCTGCCTGCCT	VPS53	ENSG00000141252.21	transcript	ENST00000437048.7	protein_coding	4/21			chr17	TogoVar
VPS53_chr17_503668_719839	672109	GACACACA others(5): Show GACACACACACAC	G G	intron_variant intron_variant	MODIFIER	NA19087.hp2 NA19087.hp2	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0004 a0003c0004t0004	a0003c0004t0004g0032 a0003c0004t0004g0032	1	17	0.0588	-12	c.286 others(31): Show c.286-10226_286-10215delGTGTGTGTGTGT	VPS53	ENSG00000141252.21	transcript	ENST00000437048.7	protein_coding	4/21			chr17	TogoVar
VPS54_chr2_63887150_64024428	63985680	TACACACA others(5): Show TACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02809.hp2 HG02280.hp1 HG02809.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0261 a0001c0001t0001g0262 a0001c0001t0001g0261 a0001c0001t0001g0262	2	100	0.0200	-12	c.-20 others(29): Show c.-20-1673_-20-1662delGTGTGTGTGTGT	VPS54	ENSG00000143952.20	transcript	ENST00000272322.9	protein_coding	1/22			chr2	TogoVar
VPS8_chr3_184807166_185057604	184810633	ATATCTAT others(5): Show ATATCTATCTATC	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00639.hp1 HG01256.hp2 HG02572.hp2 others(2): Show HG00639.hp1 HG01256.hp2 HG02572.hp2 NA18999.hp1 NA19012.hp2	a0001 a0002 a0003 a0001 a0002 a0003	a0001c0029 a0002c0002 a0003c0004 others(1): Show a0001c0029 a0002c0002 a0003c0004 a0003c0033	a0001c0029t0002 a0002c0002t0001 a0003c0004t0005 others(1): Show a0001c0029t0002 a0002c0002t0001 a0003c0004t0005 a0003c0033t0005	a0001c0029t0002g0166 a0002c0002t0001g0225 a0002c0002t0001g0273 others(2): Show a0001c0029t0002g0166 a0002c0002t0001g0225 a0002c0002t0001g0273 a0003c0004t0005g0006 a0003c0033t0005g0004	5	57	0.0877	-12	c.-16 others(23): Show c.-1680_-1669delTATCTATCTATC	VPS8	ENSG00000156931.16	transcript	ENST00000625842.3	protein_coding		1532		chr3	TogoVar
VPS8_chr3_184807166_185057604	184936515	CTGTGTGT others(5): Show CTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01256.hp1 HG01361.hp2 others(14): Show HG00639.hp2 HG01256.hp1 HG01361.hp2 HG01433.hp1 HG01891.hp2 HG02004.hp1 HG02074.hp1 HG02258.hp1 HG02630.hp1 HG03516.hp2 NA18959.hp2 NA18967.hp2 NA18981.hp1 NA18986.hp2 NA18999.hp1 NA19012.hp2 NA21309.hp1	a0003 a0004 a0005 a0003 a0004 a0005	a0003c0004 a0003c0033 a0004c0008 others(1): Show a0003c0004 a0003c0033 a0004c0008 a0005c0028	a0003c0004t0001 a0003c0004t0005 a0003c0033t0005 others(2): Show a0003c0004t0001 a0003c0004t0005 a0003c0033t0005 a0004c0008t0006 a0005c0028t0004	a0003c0004t0001g0064 a0003c0004t0001g0065 a0003c0004t0001g0066 others(14): Show a0003c0004t0001g0064 a0003c0004t0001g0065 a0003c0004t0001g0066 a0003c0004t0005g0005 a0003c0004t0005g0006 a0003c0004t0005g0007 a0003c0004t0005g0008 a0003c0004t0005g0009 a0003c0004t0005g0011 a0003c0004t0005g0012 a0003c0004t0005g0013 a0003c0004t0005g0014 a0003c0004t0005g0015 a0003c0033t0005g0004 a0004c0008t0006g0016 a0004c0008t0006g0017 a0005c0028t0004g0154	17	53	0.3208	-12	c.298 others(29): Show c.2988+215_2988+226delTGTGTGTGTGTG	VPS8	ENSG00000156931.16	transcript	ENST00000625842.3	protein_coding	35/47		INFO_REALIGN_3_PRIME	chr3	TogoVar
VPS8_chr3_184807166_185057604	184950216	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG01981.hp2 HG00438.hp1 HG01981.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0006 a0001c0001 a0004c0006	a0001c0001t0002 a0004c0006t0003 a0001c0001t0002 a0004c0006t0003	a0001c0001t0002g0105 a0004c0006t0003g0207 a0001c0001t0002g0105 a0004c0006t0003g0207	2	14	0.1429	-12	c.303 others(31): Show c.3036-7141_3036-7130delTTTTTTTTTTTT	VPS8	ENSG00000156931.16	transcript	ENST00000625842.3	protein_coding	36/47		INFO_REALIGN_3_PRIME	chr3	TogoVar
VPS8_chr3_184807166_185057604	184962724	AGTGTGTG others(5): Show AGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG02818.hp2 NA18986.hp1 HG02818.hp2 NA18986.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0004c0008 a0001c0001 a0004c0008	a0001c0001t0002 a0004c0008t0003 a0001c0001t0002 a0004c0008t0003	a0001c0001t0002g0143 a0004c0008t0003g0063 a0001c0001t0002g0143 a0004c0008t0003g0063	2	14	0.1429	-12	c.318 others(31): Show c.3184-1713_3184-1702delGTGTGTGTGTGT	VPS8	ENSG00000156931.16	transcript	ENST00000625842.3	protein_coding	37/47		INFO_REALIGN_3_PRIME	chr3	TogoVar
VPS8_chr3_184807166_185057604	184998479	TTATATAT others(5): Show TTATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0004 a0004	a0004c0018 a0004c0018	a0004c0018t0001 a0004c0018t0001	a0004c0018t0001g0059 a0004c0018t0001g0059	1	3	0.3333	-12	c.383 others(31): Show c.3837-1168_3837-1157delTATATATATATA	VPS8	ENSG00000156931.16	transcript	ENST00000625842.3	protein_coding	44/47		INFO_REALIGN_3_PRIME	chr3	TogoVar
VPS8_chr3_184807166_185057604	185003116	TTTTTTAT others(5): Show TTTTTTATTTTTA	T T	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp2 HG00438.hp1 others(94): Show HG00099.hp2 HG00280.hp2 HG00438.hp1 HG00544.hp2 HG00673.hp2 HG00733.hp2 HG00738.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01099.hp1 HG01109.hp1 HG01167.hp1 HG01169.hp2 HG01175.hp2 HG01261.hp2 HG01358.hp1 HG01361.hp1 HG01433.hp2 HG01891.hp1 HG01928.hp1 HG01934.hp2 HG01952.hp1 HG01981.hp2 HG02004.hp2 HG02015.hp2 HG02027.hp1 HG02056.hp1 HG02071.hp1 HG02109.hp2 HG02129.hp2 HG02135.hp2 HG02273.hp1 HG02280.hp1 HG02280.hp2 HG02300.hp1 HG02523.hp1 HG02602.hp2 HG02615.hp1 HG02698.hp1 HG02717.hp2 HG02735.hp1 HG02976.hp2 HG03195.hp1 HG03239.hp1 HG03239.hp2 HG03471.hp2 HG03492.hp1 HG03516.hp1 HG03540.hp1 HG03579.hp2 HG03710.hp1 HG03834.hp1 HG03942.hp1 HG04115.hp2 HG04184.hp2 HG04228.hp2 HG06807.hp1 NA18522.hp2 NA18939.hp1 NA18941.hp2 NA18942.hp2 NA18948.hp2 NA18950.hp2 NA18953.hp2 NA18954.hp2 NA18955.hp2 NA18957.hp2 NA18960.hp2 NA18964.hp2 NA18972.hp2 NA18979.hp1 NA18985.hp1 NA18986.hp1 NA18988.hp1 NA18989.hp2 NA18991.hp2 NA18994.hp1 NA19000.hp2 NA19002.hp2 NA19005.hp1 NA19011.hp2 NA19030.hp1 NA19043.hp2 NA19060.hp2 NA19063.hp1 NA19064.hp1 NA19065.hp2 NA19066.hp2 NA19068.hp2 NA19070.hp1 NA19074.hp2 NA19079.hp1 NA19082.hp1 NA19085.hp1 NA20805.hp1 NA20905.hp1	a0001 a0004 a0009 others(3): Show a0001 a0004 a0009 a0013 a0016 a0017	a0001c0001 a0001c0010 a0001c0023 others(5): Show a0001c0001 a0001c0010 a0001c0023 a0004c0006 a0009c0014 a0013c0020 a0016c0043 a0017c0024	a0001c0001t0002 a0001c0010t0002 a0001c0023t0002 others(5): Show a0001c0001t0002 a0001c0010t0002 a0001c0023t0002 a0004c0006t0003 a0009c0014t0002 a0013c0020t0002 a0016c0043t0002 a0017c0024t0002	a0001c0001t0002g0074 a0001c0001t0002g0079 a0001c0001t0002g0080 others(94): Show a0001c0001t0002g0074 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0085 a0001c0001t0002g0086 a0001c0001t0002g0087 a0001c0001t0002g0094 a0001c0001t0002g0095 a0001c0001t0002g0096 a0001c0001t0002g0097 a0001c0001t0002g0098 a0001c0001t0002g0099 a0001c0001t0002g0100 a0001c0001t0002g0101 a0001c0001t0002g0102 a0001c0001t0002g0104 a0001c0001t0002g0105 a0001c0001t0002g0106 a0001c0001t0002g0107 a0001c0001t0002g0108 a0001c0001t0002g0109 a0001c0001t0002g0110 a0001c0001t0002g0112 a0001c0001t0002g0113 a0001c0001t0002g0114 a0001c0001t0002g0115 a0001c0001t0002g0118 a0001c0001t0002g0119 a0001c0001t0002g0120 a0001c0001t0002g0122 a0001c0001t0002g0123 a0001c0001t0002g0124 a0001c0001t0002g0126 a0001c0001t0002g0128 a0001c0001t0002g0129 a0001c0001t0002g0130 a0001c0001t0002g0131 a0001c0001t0002g0133 a0001c0001t0002g0134 a0001c0001t0002g0135 a0001c0001t0002g0136 a0001c0001t0002g0137 a0001c0001t0002g0138 a0001c0001t0002g0140 a0001c0001t0002g0141 a0001c0001t0002g0142 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0145 a0001c0001t0002g0146 a0001c0001t0002g0147 a0001c0001t0002g0148 a0001c0001t0002g0158 a0001c0001t0002g0159 a0001c0001t0002g0160 a0001c0001t0002g0161 a0001c0001t0002g0162 a0001c0001t0002g0163 a0001c0001t0002g0164 a0001c0001t0002g0165 a0001c0001t0002g0179 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0182 a0001c0001t0002g0183 a0001c0001t0002g0188 a0001c0001t0002g0192 a0001c0001t0002g0194 a0001c0001t0002g0196 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0201 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0263 a0001c0001t0002g0265 a0001c0001t0002g0266 a0001c0001t0002g0267 a0001c0001t0002g0268 a0001c0010t0002g0184 a0001c0010t0002g0185 a0001c0010t0002g0186 a0001c0010t0002g0187 a0001c0023t0002g0127 a0004c0006t0003g0046 a0004c0006t0003g0047 a0004c0006t0003g0048 a0004c0006t0003g0207 a0009c0014t0002g0121 a0009c0014t0002g0195 a0013c0020t0002g0125 a0016c0043t0002g0193 a0017c0024t0002g0132	97	271	0.3579	-12	c.400 others(31): Show c.4002+3279_4002+3290delATTTTTATTTTT	VPS8	ENSG00000156931.16	transcript	ENST00000625842.3	protein_coding	45/47		INFO_REALIGN_3_PRIME	chr3	TogoVar
VPS9D1_chr16_89702134_89725898	89714294	GTGGCCCA others(5): Show GTGGCCCAAGACA	G G	intron_variant intron_variant	MODIFIER	NA18992.hp2 NA18992.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0203 a0001c0003t0002g0203	1	428	0.0023	-12	c.432 others(29): Show c.432-1590_432-1579delTGTCTTGGGCCA	VPS9D1	ENSG00000075399.14	transcript	ENST00000389386.8	protein_coding	4/14			chr16	TogoVar
VPS9D1_chr16_89702134_89725898	89724895	TCTACTTA others(5): Show TCTACTTATCTAC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0053 a0001c0001t0001g0053	1	428	0.0023	-12	c.-40 others(23): Show c.-4046_-4035delGTAGATAAGTAG	VPS9D1	ENSG00000075399.14	transcript	ENST00000389386.8	protein_coding		3998		chr16	TogoVar
VRK1_chr14_96792382_96886609	96808017	CTGTGTGT others(5): Show CTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	NA18982.hp2 NA18987.hp1 NA18982.hp2 NA18987.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0146 a0001c0001t0001g0147 a0001c0001t0001g0146 a0001c0001t0001g0147	2	96	0.0208	-12	c.-6+ others(29): Show c.-6+10597_-6+10608delTGTGTGTGTGTG	VRK1	ENSG00000100749.9	transcript	ENST00000216639.8	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr14	TogoVar
VRK1_chr14_96792382_96886609	96867456	AGTGTGTG others(5): Show AGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG02602.hp1 HG02630.hp1 HG02965.hp1 others(4): Show HG02602.hp1 HG02630.hp1 HG02965.hp1 HG03942.hp2 NA18980.hp1 NA19011.hp1 NA20129.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0033 a0001c0002t0001g0034 a0001c0002t0001g0035 others(4): Show a0001c0002t0001g0033 a0001c0002t0001g0034 a0001c0002t0001g0035 a0001c0002t0001g0036 a0001c0002t0001g0090 a0001c0002t0001g0135 a0001c0002t0001g0136	7	39	0.1795	-12	c.106 others(31): Show c.1068+6746_1068+6757delGTGTGTGTGTGT	VRK1	ENSG00000100749.9	transcript	ENST00000216639.8	protein_coding	11/12		INFO_REALIGN_3_PRIME	chr14	TogoVar
VRK2_chr2_58041806_58164871	58073648	ATATATTT others(5): Show ATATATTTATATT	A A	intron_variant intron_variant	MODIFIER	HG01358.hp1 HG01358.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0035 a0002c0002t0002g0035	1	95	0.0105	-12	c.137 others(31): Show c.137-10417_137-10406delTTATATTTATAT	VRK2	ENSG00000028116.18	transcript	ENST00000340157.9	protein_coding	2/12		INFO_REALIGN_3_PRIME	chr2	TogoVar
VRK2_chr2_58041806_58164871	58136865	ATATATCA others(5): Show ATATATCATATAT	A A	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01884.hp2 HG02572.hp1 others(5): Show HG01884.hp1 HG01884.hp2 HG02572.hp1 HG02922.hp1 NA18906.hp1 NA19030.hp1 NA19043.hp1 NA19240.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0261 a0001c0003t0001g0263 a0001c0003t0001g0267 others(5): Show a0001c0003t0001g0261 a0001c0003t0001g0263 a0001c0003t0001g0267 a0001c0003t0001g0268 a0001c0003t0001g0269 a0001c0003t0001g0270 a0001c0003t0001g0271 a0001c0003t0001g0272	8	338	0.0237	-12	c.856 others(29): Show c.856+1679_856+1690delTATATCATATAT	VRK2	ENSG00000028116.18	transcript	ENST00000340157.9	protein_coding	10/12		INFO_REALIGN_3_PRIME	chr2	TogoVar
VRK2_chr2_58041806_58164871	58149991	CTTTTCTT others(5): Show CTTTTCTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA18945.hp1 NA18952.hp1 NA18999.hp2 others(1): Show NA18945.hp1 NA18952.hp1 NA18999.hp2 NA19066.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0275 a0001c0001t0001g0002 a0001c0001t0001g0275	4	338	0.0118	-12	c.118 others(31): Show c.1182+3522_1182+3533delCTTTTTTTTTTT	VRK2	ENSG00000028116.18	transcript	ENST00000340157.9	protein_coding	12/12		INFO_REALIGN_3_PRIME	chr2	TogoVar
VRK3_chr19_49971468_50030372	50019674	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00741.hp1 HG01081.hp1 others(39): Show HG00280.hp1 HG00741.hp1 HG01081.hp1 HG01099.hp1 HG01175.hp1 HG01192.hp1 HG01243.hp2 HG01255.hp1 HG01361.hp1 HG02056.hp2 HG02074.hp1 HG02165.hp2 HG02258.hp2 HG02559.hp1 HG02723.hp2 HG02818.hp1 HG02895.hp2 HG02897.hp1 HG02976.hp2 HG03041.hp2 HG03139.hp1 HG03209.hp1 HG03239.hp1 HG03471.hp1 HG03516.hp1 HG03540.hp2 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG04199.hp1 HG04199.hp2 NA18747.hp2 NA18941.hp1 NA18963.hp1 NA18985.hp1 NA18995.hp2 NA19000.hp1 NA19009.hp2 NA19030.hp2 NA19060.hp2 NA20300.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0002 a0001c0001t0001g0020 a0001c0001t0001g0021 others(35): Show a0001c0001t0001g0002 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0198 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0210 a0001c0001t0001g0211 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0220 a0001c0001t0001g0221 a0001c0001t0001g0303 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0285	42	58	0.7241	-12	c.-2+ others(25): Show c.-2+899_-2+910delAAAAAAAAAAAA	VRK3	ENSG00000105053.11	transcript	ENST00000316763.8	protein_coding	2/14			chr19	TogoVar
VSIG10L2_chr11_125941044_125961319	125950474	TGGGAAGG others(5): Show TGGGAAGGGGAAG	T T	intron_variant intron_variant	MODIFIER	HG03239.hp1 HG03831.hp2 HG03239.hp1 HG03831.hp2	a0001 a0001	a0001c0005 a0001c0005	a0001c0005t0001 a0001c0005t0001	a0001c0005t0001g0025 a0001c0005t0001g0025	2	438	0.0046	-12	c.985 others(27): Show c.985+200_985+211delGAAGGGGAAGGG	VSIG10L2	ENSG00000283703.3	transcript	ENST00000686984.1	protein_coding	4/11		INFO_REALIGN_3_PRIME	chr11	TogoVar
VSIG10L_chr19_51326541_51347139	51329827	GACACACA others(5): Show GACACACACACAC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02572.hp1 HG02895.hp1 NA21309.hp2 HG02572.hp1 HG02895.hp1 NA21309.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0027 a0001c0003t0001g0027	3	327	0.0092	-12	c.27 others(23): Show c.2772_*2783delGTGTGTGTGTGT	VSIG10L	ENSG00000186806.6	transcript	ENST00000335624.5	protein_coding		1713		chr19	TogoVar
VSIG10_chr12_118058593_118109011	118075168	ATATGTAT others(5): Show ATATGTATATATG	A A	intron_variant intron_variant	MODIFIER	NA18947.hp2 NA18964.hp2 NA19088.hp2 NA18947.hp2 NA18964.hp2 NA19088.hp2	a0002 a0002	a0002c0001 a0002c0003 a0002c0001 a0002c0003	a0002c0001t0023 a0002c0003t0012 a0002c0003t0023 a0002c0001t0023 a0002c0003t0012 a0002c0003t0023	a0002c0001t0023g0199 a0002c0003t0012g0036 a0002c0003t0023g0037 a0002c0001t0023g0199 a0002c0003t0012g0036 a0002c0003t0023g0037	3	410	0.0073	-12	c.926 others(29): Show c.926-1188_926-1177delCATATATACATA	VSIG10	ENSG00000176834.14	transcript	ENST00000359236.10	protein_coding	4/8			chr12	TogoVar
VSIG10_chr12_118058593_118109011	118083114	CAAAAAAA others(5): Show CAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01192.hp1 NA18945.hp1 NA18963.hp1 others(4): Show HG01192.hp1 NA18945.hp1 NA18963.hp1 NA18978.hp2 NA18994.hp1 NA18995.hp1 NA19011.hp2	a0002 a0005 a0002 a0005	a0002c0001 a0002c0003 a0005c0016 a0002c0001 a0002c0003 a0005c0016	a0002c0001t0004 a0002c0001t0012 a0002c0001t0037 others(2): Show a0002c0001t0004 a0002c0001t0012 a0002c0001t0037 a0002c0003t0001 a0005c0016t0019	a0002c0001t0004g0270 a0002c0001t0012g0343 a0002c0001t0037g0321 others(4): Show a0002c0001t0004g0270 a0002c0001t0012g0343 a0002c0001t0037g0321 a0002c0003t0001g0275 a0005c0016t0019g0112 a0005c0016t0019g0114 a0005c0016t0019g0115	7	41	0.1707	-12	c.362 others(27): Show c.362-697_362-686delTTTTTTTTTTTT	VSIG10	ENSG00000176834.14	transcript	ENST00000359236.10	protein_coding	2/8			chr12	TogoVar
VSIG10_chr12_118058593_118109011	118107700	AAAATAAA others(5): Show AAAATAAATAAAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01496.hp2 HG02165.hp2 HG01496.hp2 HG02165.hp2	a0002 a0003 a0002 a0003	a0002c0001 a0003c0006 a0002c0001 a0003c0006	a0002c0001t0048 a0003c0006t0002 a0002c0001t0048 a0003c0006t0002	a0002c0001t0048g0143 a0003c0006t0002g0357 a0002c0001t0048g0143 a0003c0006t0002g0357	2	98	0.0204	-12	c.-40 others(23): Show c.-4041_-4030delATTTATTTATTT	VSIG10	ENSG00000176834.14	transcript	ENST00000359236.10	protein_coding		3690		chr12	TogoVar
VSIG1_chrX_108040065_108084184	108047955	CACACACA others(5): Show CACACACATATAT	C C	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02109.hp2 HG02486.hp1 others(6): Show HG01109.hp1 HG02109.hp2 HG02486.hp1 HG02572.hp1 HG02717.hp1 HG02723.hp2 HG03471.hp1 HG06807.hp1 NA18522.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0002 a0001c0001t0003	a0001c0001t0002g0048 a0001c0001t0002g0050 a0001c0001t0002g0051 others(5): Show a0001c0001t0002g0048 a0001c0001t0002g0050 a0001c0001t0002g0051 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0062 a0001c0001t0003g0038	9	252	0.0357	-12	c.49+ others(27): Show c.49+2778_49+2789delCACACATATATA	VSIG1	ENSG00000101842.14	transcript	ENST00000217957.10	protein_coding	1/6		INFO_REALIGN_3_PRIME	chrX	TogoVar
VSIG1_chrX_108040065_108084184	108047957	CACACATA others(5): Show CACACATATATAT	C C	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG06807.hp2 NA19240.hp1 HG03130.hp1 HG06807.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0215 a0001c0001t0003g0219 a0001c0001t0003g0220 a0001c0001t0003g0215 a0001c0001t0003g0219 a0001c0001t0003g0220	3	232	0.0129	-12	c.49+ others(27): Show c.49+2780_49+2791delCACATATATATA	VSIG1	ENSG00000101842.14	transcript	ENST00000217957.10	protein_coding	1/6		INFO_REALIGN_3_PRIME	chrX	TogoVar
VSIG1_chrX_108040065_108084184	108047959	CACATATA others(5): Show CACATATATATAT	C C	intron_variant intron_variant	MODIFIER	NA21309.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0116 a0001c0001t0001g0116	1	193	0.0052	-12	c.49+ others(27): Show c.49+2782_49+2793delCATATATATATA	VSIG1	ENSG00000101842.14	transcript	ENST00000217957.10	protein_coding	1/6		INFO_REALIGN_3_PRIME	chrX	TogoVar
VSIG4_chrX_66016738_66045080	66036921	TTATATTA others(5): Show TTATATTATATGA	T T	intron_variant intron_variant	MODIFIER	HG01978.hp2 HG01978.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0007 a0001c0001t0001g0007	1	212	0.0047	-12	c.55+ others(27): Show c.55+3011_55+3022delTCATATAATATA	VSIG4	ENSG00000155659.15	transcript	ENST00000374737.9	protein_coding	1/7			chrX	TogoVar
VSIR_chr10_71742556_71778520	71759838	CACACACA others(5): Show CACACACACATAT	C C	intron_variant intron_variant	MODIFIER	HG00609.hp1 HG02055.hp2 HG02056.hp1 others(13): Show HG00609.hp1 HG02055.hp2 HG02056.hp1 NA18955.hp2 NA18957.hp2 NA18967.hp2 NA18972.hp2 NA18974.hp1 NA18982.hp1 NA18985.hp1 NA18994.hp1 NA18997.hp1 NA19004.hp1 NA19063.hp2 NA19066.hp1 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0016 a0001c0001 a0001c0016	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0011 a0001c0001t0024 a0001c0001t0084 a0001c0016t0003	a0001c0001t0001g0044 a0001c0001t0002g0012 a0001c0001t0002g0170 others(8): Show a0001c0001t0001g0044 a0001c0001t0002g0012 a0001c0001t0002g0170 a0001c0001t0003g0151 a0001c0001t0003g0152 a0001c0001t0003g0216 a0001c0001t0003g0265 a0001c0001t0011g0043 a0001c0001t0024g0141 a0001c0001t0084g0163 a0001c0016t0003g0161	16	460	0.0348	-12	c.568 others(29): Show c.568+1018_568+1029delATATGTGTGTGT	VSIR	ENSG00000107738.20	transcript	ENST00000394957.8	protein_coding	3/6			chr10	TogoVar
VSIR_chr10_71742556_71778520	71759886	TATACACA others(5): Show TATACACACACAC	T T	intron_variant intron_variant	MODIFIER	NA19007.hp2 NA19007.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0168 a0001c0001t0007g0168	1	460	0.0022	-12	c.568 others(27): Show c.568+970_568+981delGTGTGTGTGTAT	VSIR	ENSG00000107738.20	transcript	ENST00000394957.8	protein_coding	3/6			chr10	TogoVar
VSIR_chr10_71742556_71778520	71759942	CACACATA others(5): Show CACACATATATAT	C C	intron_variant intron_variant	MODIFIER	HG04115.hp1 HG04115.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0070 a0001c0001t0070	a0001c0001t0070g0323 a0001c0001t0070g0323	1	460	0.0022	-12	c.568 others(27): Show c.568+914_568+925delATATATATGTGT	VSIR	ENSG00000107738.20	transcript	ENST00000394957.8	protein_coding	3/6			chr10	TogoVar
VSIR_chr10_71742556_71778520	71760110	CATATATG others(5): Show CATATATGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0003 a0001c0003t0003	a0001c0003t0003g0317 a0001c0003t0003g0317	1	417	0.0024	-12	c.568 others(27): Show c.568+746_568+757delACACACATATAT	VSIR	ENSG00000107738.20	transcript	ENST00000394957.8	protein_coding	3/6			chr10	TogoVar
VSNL1_chr2_17535696_17662018	17589950	TTCCTGTT others(5): Show TTCCTGTTCCTTC	T T	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00323.hp2 HG00735.hp1 others(44): Show HG00140.hp2 HG00323.hp2 HG00735.hp1 HG00738.hp1 HG01069.hp1 HG01070.hp2 HG01071.hp2 HG01109.hp1 HG01175.hp1 HG01192.hp1 HG01256.hp1 HG01257.hp1 HG01258.hp1 HG01358.hp2 HG01433.hp1 HG01433.hp2 HG01496.hp1 HG01516.hp2 HG01891.hp2 HG01981.hp2 HG02004.hp2 HG02109.hp2 HG02257.hp2 HG02300.hp2 HG02559.hp2 HG02615.hp2 HG02622.hp1 HG02717.hp1 HG02717.hp2 HG02723.hp1 HG02896.hp1 HG02897.hp1 HG03098.hp2 HG03209.hp1 HG03225.hp2 HG03239.hp2 HG03453.hp1 HG03471.hp2 HG03516.hp1 HG03540.hp1 HG03579.hp1 HG03654.hp1 HG03710.hp2 HG04228.hp2 NA18955.hp1 NA19067.hp2 NA19077.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 others(12): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0013 a0001c0001t0014 a0001c0001t0015 a0001c0001t0017 a0001c0001t0021 a0001c0001t0023 a0001c0001t0034 a0001c0001t0039	a0001c0001t0003g0007 a0001c0001t0003g0074 a0001c0001t0003g0075 others(42): Show a0001c0001t0003g0007 a0001c0001t0003g0074 a0001c0001t0003g0075 a0001c0001t0003g0076 a0001c0001t0003g0084 a0001c0001t0003g0085 a0001c0001t0003g0086 a0001c0001t0003g0087 a0001c0001t0003g0089 a0001c0001t0003g0099 a0001c0001t0003g0103 a0001c0001t0003g0111 a0001c0001t0004g0096 a0001c0001t0004g0097 a0001c0001t0004g0104 a0001c0001t0004g0106 a0001c0001t0004g0110 a0001c0001t0006g0070 a0001c0001t0007g0006 a0001c0001t0009g0082 a0001c0001t0010g0077 a0001c0001t0010g0078 a0001c0001t0010g0079 a0001c0001t0011g0092 a0001c0001t0011g0098 a0001c0001t0011g0102 a0001c0001t0011g0109 a0001c0001t0013g0068 a0001c0001t0013g0069 a0001c0001t0013g0071 a0001c0001t0013g0072 a0001c0001t0013g0073 a0001c0001t0013g0094 a0001c0001t0014g0081 a0001c0001t0014g0088 a0001c0001t0014g0093 a0001c0001t0014g0100 a0001c0001t0014g0105 a0001c0001t0015g0108 a0001c0001t0017g0080 a0001c0001t0021g0090 a0001c0001t0021g0091 a0001c0001t0023g0083 a0001c0001t0034g0107 a0001c0001t0039g0101	47	230	0.2043	-12	c.-5- others(27): Show c.-5-2114_-5-2103delTTCCTTCTCCTG	VSNL1	ENSG00000163032.12	transcript	ENST00000295156.9	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr2	TogoVar
VSNL1_chr2_17535696_17662018	17592640	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00639.hp2 HG01934.hp2 others(25): Show HG00323.hp1 HG00639.hp2 HG01934.hp2 HG02015.hp1 HG02145.hp1 HG02155.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02615.hp1 HG02622.hp2 HG02630.hp2 HG02723.hp2 HG02735.hp2 HG02809.hp2 HG02896.hp2 HG02897.hp2 HG03098.hp1 HG03669.hp1 HG04204.hp2 NA18747.hp2 NA18945.hp2 NA18993.hp1 NA19043.hp1 NA19055.hp1 NA19064.hp1 NA20129.hp2 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0008 others(12): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0016 a0001c0001t0018 a0001c0001t0019 a0001c0001t0021 a0001c0001t0023 a0001c0001t0024 a0001c0001t0025 a0001c0001t0030 a0001c0001t0031 a0001c0001t0037	a0001c0001t0001g0016 a0001c0001t0001g0064 a0001c0001t0005g0042 others(25): Show a0001c0001t0001g0016 a0001c0001t0001g0064 a0001c0001t0005g0042 a0001c0001t0005g0157 a0001c0001t0008g0128 a0001c0001t0008g0129 a0001c0001t0008g0130 a0001c0001t0008g0133 a0001c0001t0009g0050 a0001c0001t0010g0154 a0001c0001t0010g0177 a0001c0001t0016g0153 a0001c0001t0016g0163 a0001c0001t0016g0167 a0001c0001t0018g0057 a0001c0001t0019g0045 a0001c0001t0021g0191 a0001c0001t0021g0192 a0001c0001t0023g0132 a0001c0001t0024g0162 a0001c0001t0024g0164 a0001c0001t0024g0165 a0001c0001t0025g0040 a0001c0001t0025g0151 a0001c0001t0025g0166 a0001c0001t0030g0131 a0001c0001t0031g0156 a0001c0001t0037g0127	28	36	0.7778	-12	c.162 others(27): Show c.162+432_162+443delTTTTTTTTTTTT	VSNL1	ENSG00000163032.12	transcript	ENST00000295156.9	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr2	TogoVar
VSNL1_chr2_17535696_17662018	17622506	AAAAGAAA others(5): Show AAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01069.hp1 HG01070.hp2 others(17): Show HG00735.hp1 HG01069.hp1 HG01070.hp2 HG01071.hp2 HG01109.hp1 HG01175.hp1 HG01192.hp1 HG01256.hp1 HG01257.hp1 HG01258.hp1 HG01358.hp2 HG01433.hp1 HG01981.hp2 HG02004.hp2 HG02300.hp2 HG02559.hp2 HG02723.hp1 HG03579.hp1 HG03654.hp1 HG04228.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0007 a0001c0001t0009 others(4): Show a0001c0001t0003 a0001c0001t0007 a0001c0001t0009 a0001c0001t0011 a0001c0001t0013 a0001c0001t0014 a0001c0001t0039	a0001c0001t0003g0074 a0001c0001t0003g0075 a0001c0001t0003g0076 others(16): Show a0001c0001t0003g0074 a0001c0001t0003g0075 a0001c0001t0003g0076 a0001c0001t0003g0085 a0001c0001t0003g0086 a0001c0001t0003g0087 a0001c0001t0003g0089 a0001c0001t0003g0103 a0001c0001t0007g0006 a0001c0001t0009g0082 a0001c0001t0011g0102 a0001c0001t0013g0068 a0001c0001t0013g0071 a0001c0001t0013g0072 a0001c0001t0013g0073 a0001c0001t0013g0094 a0001c0001t0014g0088 a0001c0001t0014g0093 a0001c0001t0039g0101	20	230	0.0870	-12	c.163 others(31): Show c.163-26900_163-26889delGAAAGAAAGAAA	VSNL1	ENSG00000163032.12	transcript	ENST00000295156.9	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr2	TogoVar
VSNL1_chr2_17535696_17662018	17622532	AAAAGAAA others(5): Show AAAAGAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00438.hp1 HG00738.hp2 others(26): Show HG00280.hp1 HG00438.hp1 HG00738.hp2 HG01261.hp1 HG01496.hp1 HG02004.hp1 HG02055.hp2 HG02109.hp1 HG02145.hp2 HG02451.hp2 HG02486.hp1 HG02559.hp1 HG02615.hp2 HG02630.hp1 HG02698.hp2 HG02723.hp2 HG02809.hp2 HG03041.hp1 HG03130.hp1 HG03225.hp2 HG03579.hp2 HG03669.hp1 NA18522.hp2 NA19067.hp1 NA19070.hp1 NA19240.hp2 NA20752.hp2 NA20905.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(16): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0001c0001t0012 a0001c0001t0017 a0001c0001t0019 a0001c0001t0020 a0001c0001t0021 a0001c0001t0023 a0001c0001t0032 a0001c0001t0034 a0001c0001t0037 a0001c0001t0038 a0001c0001t0041	a0001c0001t0001g0001 a0001c0001t0001g0014 a0001c0001t0001g0037 others(26): Show a0001c0001t0001g0001 a0001c0001t0001g0014 a0001c0001t0001g0037 a0001c0001t0001g0054 a0001c0001t0002g0139 a0001c0001t0002g0146 a0001c0001t0002g0147 a0001c0001t0004g0112 a0001c0001t0005g0021 a0001c0001t0006g0002 a0001c0001t0006g0119 a0001c0001t0007g0196 a0001c0001t0007g0202 a0001c0001t0008g0012 a0001c0001t0008g0129 a0001c0001t0010g0077 a0001c0001t0010g0154 a0001c0001t0012g0144 a0001c0001t0017g0065 a0001c0001t0019g0195 a0001c0001t0020g0008 a0001c0001t0021g0192 a0001c0001t0023g0083 a0001c0001t0023g0132 a0001c0001t0032g0207 a0001c0001t0034g0107 a0001c0001t0037g0127 a0001c0001t0038g0197 a0001c0001t0041g0209	29	103	0.2816	-12	c.163 others(31): Show c.163-26818_163-26807delGAAAGAAAGAAA	VSNL1	ENSG00000163032.12	transcript	ENST00000295156.9	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr2	TogoVar
VSNL1_chr2_17535696_17662018	17655455	TCACACAC others(5): Show TCACACACACACA	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG04204.hp2 HG04204.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0031 a0001c0001t0031	a0001c0001t0031g0156 a0001c0001t0031g0156	1	39	0.0256	-12	c.96 others(20): Show c.96_*107delCACACACACACA	VSNL1	ENSG00000163032.12	transcript	ENST00000295156.9	protein_coding	4/4	96	INFO_REALIGN_3_PRIME	chr2	TogoVar
VSTM1_chr19_54035825_54068897	54036247	ATTTATTT others(5): Show ATTTATTTTTATT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00280.hp2 HG00423.hp1 HG00544.hp1 others(117): Show HG00280.hp2 HG00423.hp1 HG00544.hp1 HG00544.hp2 HG00558.hp1 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00642.hp1 HG00642.hp2 HG00733.hp2 HG00738.hp1 HG01109.hp1 HG01109.hp2 HG01123.hp2 HG01167.hp2 HG01433.hp1 HG01516.hp1 HG01516.hp2 HG01517.hp1 HG01884.hp2 HG01891.hp1 HG01891.hp2 HG01978.hp2 HG02004.hp1 HG02015.hp1 HG02015.hp2 HG02027.hp1 HG02055.hp1 HG02071.hp1 HG02071.hp2 HG02083.hp1 HG02132.hp1 HG02132.hp2 HG02135.hp2 HG02145.hp2 HG02155.hp1 HG02257.hp1 HG02451.hp2 HG02523.hp1 HG02615.hp2 HG02622.hp1 HG02630.hp2 HG02717.hp2 HG02818.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02897.hp2 HG02922.hp2 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG03041.hp1 HG03098.hp1 HG03130.hp2 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03225.hp1 HG03225.hp2 HG03471.hp2 HG03486.hp1 HG03516.hp1 HG03516.hp2 HG03669.hp1 HG03831.hp1 HG04199.hp2 HG04204.hp1 NA18522.hp1 NA18522.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18940.hp1 NA18940.hp2 NA18941.hp2 NA18942.hp1 NA18943.hp2 NA18944.hp1 NA18945.hp1 NA18948.hp2 NA18954.hp2 NA18963.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18967.hp2 NA18968.hp1 NA18971.hp2 NA18973.hp2 NA18985.hp1 NA18990.hp1 NA18991.hp1 NA18993.hp2 NA18994.hp2 NA18995.hp1 NA18998.hp1 NA19043.hp1 NA19043.hp2 NA19056.hp2 NA19060.hp1 NA19062.hp2 NA19063.hp2 NA19068.hp1 NA19068.hp2 NA19070.hp2 NA19077.hp1 NA19078.hp2 NA19079.hp1 NA19080.hp1 NA19081.hp2 NA19084.hp1 NA19085.hp1 NA19086.hp1 NA19086.hp2 NA19240.hp2 NA20752.hp1 NA21309.hp2	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0003 a0002c0002 others(3): Show a0001c0001 a0001c0003 a0002c0002 a0002c0004 a0002c0005 a0005c0011	a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 others(7): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0004 a0001c0003t0001 a0001c0003t0002 a0001c0003t0004 a0002c0002t0001 a0002c0004t0003 a0002c0005t0003 a0005c0011t0003	a0001c0001t0001g0001 a0001c0001t0001g0011 a0001c0001t0001g0017 others(97): Show a0001c0001t0001g0001 a0001c0001t0001g0011 a0001c0001t0001g0017 a0001c0001t0001g0023 a0001c0001t0001g0031 a0001c0001t0001g0035 a0001c0001t0001g0041 a0001c0001t0001g0042 a0001c0001t0001g0058 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0084 a0001c0001t0001g0091 a0001c0001t0001g0095 a0001c0001t0001g0099 a0001c0001t0001g0130 a0001c0001t0001g0133 a0001c0001t0001g0146 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0187 a0001c0001t0001g0190 a0001c0001t0001g0205 a0001c0001t0001g0268 a0001c0001t0001g0276 a0001c0001t0001g0280 a0001c0001t0001g0288 a0001c0001t0001g0289 a0001c0001t0001g0316 a0001c0001t0001g0321 a0001c0001t0001g0323 a0001c0001t0001g0331 a0001c0001t0001g0337 a0001c0001t0001g0338 a0001c0001t0002g0002 a0001c0001t0002g0006 a0001c0001t0002g0009 a0001c0001t0002g0010 a0001c0001t0002g0019 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0069 a0001c0001t0002g0083 a0001c0001t0002g0106 a0001c0001t0002g0127 a0001c0001t0002g0128 a0001c0001t0002g0141 a0001c0001t0002g0147 a0001c0001t0002g0172 a0001c0001t0002g0181 a0001c0001t0002g0256 a0001c0001t0002g0257 a0001c0001t0002g0258 a0001c0001t0002g0264 a0001c0001t0002g0265 a0001c0001t0002g0269 a0001c0001t0002g0272 a0001c0001t0002g0306 a0001c0001t0002g0334 a0001c0001t0004g0050 a0001c0001t0004g0108 a0001c0001t0004g0275 a0001c0003t0001g0044 a0001c0003t0001g0233 a0001c0003t0001g0235 a0001c0003t0001g0240 a0001c0003t0001g0252 a0001c0003t0002g0016 a0001c0003t0002g0220 a0001c0003t0002g0243 a0001c0003t0002g0249 a0001c0003t0004g0236 a0002c0002t0001g0003 a0002c0002t0001g0008 a0002c0002t0001g0012 a0002c0002t0001g0013 a0002c0002t0001g0039 a0002c0002t0001g0077 a0002c0002t0001g0078 a0002c0002t0001g0090 a0002c0002t0001g0107 a0002c0002t0001g0115 a0002c0002t0001g0122 a0002c0002t0001g0161 a0002c0002t0001g0204 a0002c0002t0001g0251 a0002c0004t0003g0036 a0002c0004t0003g0079 a0002c0004t0003g0102 a0002c0004t0003g0152 a0002c0004t0003g0171 a0002c0004t0003g0279 a0002c0004t0003g0318 a0002c0004t0003g0329 a0002c0005t0003g0045 a0002c0005t0003g0234 a0005c0011t0003g0184	120	440	0.2727	-12	c.47 others(23): Show c.4702_*4713delAATAAAAATAAA	VSTM1	ENSG00000189068.11	transcript	ENST00000338372.7	protein_coding		4577		chr19	TogoVar
VSTM1_chr19_54035825_54068897	54042827	TATATATA others(5): Show TATATATATATAC	T T	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG00323.hp2	a0002 a0002	a0002c0007 a0002c0007	a0002c0007t0003 a0002c0007t0003	a0002c0007t0003g0283 a0002c0007t0003g0283	1	440	0.0023	-12	c.395 others(27): Show c.395-470_395-459delGTATATATATAT	VSTM1	ENSG00000189068.11	transcript	ENST00000338372.7	protein_coding	4/8			chr19	TogoVar
VSTM1_chr19_54035825_54068897	54064788	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19003.hp1 NA19003.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0203 a0002c0002t0001g0203	1	223	0.0045	-12	c.-10 others(23): Show c.-1023_-1012delAAAAAAAAAAAA	VSTM1	ENSG00000189068.11	transcript	ENST00000338372.7	protein_coding		892		chr19	TogoVar
VSTM2A_chr7_54537375_54576067	54573596	CCACACAC others(5): Show CCACACACACACA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01123.hp1 HG01358.hp2 HG01123.hp1 HG01358.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0027 a0001c0001t0002 a0001c0001t0027	a0001c0001t0002g0010 a0001c0001t0027g0010 a0001c0001t0002g0010 a0001c0001t0027g0010	2	152	0.0132	-12	c.43 others(23): Show c.4378_*4389delCACACACACACA	VSTM2A	ENSG00000170419.11	transcript	ENST00000402613.4	protein_coding		2530		chr7	TogoVar
VSTM2L_chr20_37898127_37950350	37921838	CTTTTTTT others(5): Show CTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA20905.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0035 a0001c0001t0001g0035	1	221	0.0045	-12	c.122 others(29): Show c.122-9786_122-9775delTTTTTTTTTTTT	VSTM2L	ENSG00000132821.12	transcript	ENST00000373461.9	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr20	TogoVar
VSTM4_chr10_49009236_49120522	49096622	CGTGTGTG others(5): Show CGTGTGTGTGTGT	C C	intron_variant intron_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0004 a0004	a0004c0011 a0004c0011	a0004c0011t0037 a0004c0011t0037	a0004c0011t0037g0259 a0004c0011t0037g0259	1	76	0.0132	-12	c.458 others(31): Show c.458-10611_458-10600delACACACACACAC	VSTM4	ENSG00000165633.13	transcript	ENST00000332853.9	protein_coding	2/7			chr10	TogoVar
VSTM4_chr10_49009236_49120522	49100072	AAGAGATA others(5): Show AAGAGATATTATC	A A	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01123.hp1 HG01981.hp1 others(16): Show HG01109.hp1 HG01123.hp1 HG01981.hp1 HG02109.hp1 HG02145.hp1 HG02451.hp1 HG02572.hp2 HG02630.hp1 HG02647.hp1 HG02723.hp1 HG02922.hp2 HG02965.hp1 HG02965.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03225.hp2 HG03453.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0003 a0001c0001t0010 a0001c0003t0004 others(1): Show a0001c0001t0003 a0001c0001t0010 a0001c0003t0004 a0001c0003t0036	a0001c0001t0003g0203 a0001c0001t0010g0201 a0001c0003t0004g0168 others(16): Show a0001c0001t0003g0203 a0001c0001t0010g0201 a0001c0003t0004g0168 a0001c0003t0004g0195 a0001c0003t0004g0196 a0001c0003t0004g0198 a0001c0003t0004g0199 a0001c0003t0004g0200 a0001c0003t0004g0202 a0001c0003t0004g0204 a0001c0003t0004g0205 a0001c0003t0004g0206 a0001c0003t0004g0207 a0001c0003t0004g0208 a0001c0003t0004g0209 a0001c0003t0004g0210 a0001c0003t0004g0211 a0001c0003t0004g0241 a0001c0003t0036g0197	19	278	0.0683	-12	c.457 others(29): Show c.457+7510_457+7521delGATAATATCTCT	VSTM4	ENSG00000165633.13	transcript	ENST00000332853.9	protein_coding	2/7			chr10	TogoVar
VSTM5_chr11_93813232_93855618	93834743	ACTGCACT others(5): Show ACTGCACTCCAGC	A A	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01884.hp1 HG02258.hp1 others(19): Show HG01243.hp2 HG01884.hp1 HG02258.hp1 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02622.hp2 HG02630.hp2 HG02818.hp2 HG02896.hp2 HG02976.hp2 HG03041.hp1 HG03130.hp2 HG03195.hp1 HG03209.hp1 HG03471.hp2 HG03516.hp2 HG03579.hp2 NA18522.hp1 NA19030.hp1 NA19030.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0013 a0001c0001t0015 others(7): Show a0001c0001t0011 a0001c0001t0013 a0001c0001t0015 a0001c0001t0019 a0001c0001t0021 a0001c0001t0026 a0001c0001t0033 a0001c0001t0034 a0001c0001t0042 a0001c0001t0044	a0001c0001t0011g0013 a0001c0001t0011g0234 a0001c0001t0011g0238 others(15): Show a0001c0001t0011g0013 a0001c0001t0011g0234 a0001c0001t0011g0238 a0001c0001t0011g0239 a0001c0001t0013g0056 a0001c0001t0013g0058 a0001c0001t0013g0059 a0001c0001t0013g0064 a0001c0001t0015g0046 a0001c0001t0015g0268 a0001c0001t0015g0269 a0001c0001t0019g0042 a0001c0001t0021g0055 a0001c0001t0026g0054 a0001c0001t0033g0232 a0001c0001t0034g0068 a0001c0001t0042g0233 a0001c0001t0044g0267	22	349	0.0630	-12	c.92- others(29): Show c.92-13432_92-13421delGCTGGAGTGCAG	VSTM5	ENSG00000214376.6	transcript	ENST00000409977.2	protein_coding	1/3			chr11	TogoVar
VSTM5_chr11_93813232_93855618	93834781	TCAAAAAA others(5): Show TCAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG01884.hp1 HG02258.hp1 others(19): Show HG01243.hp2 HG01884.hp1 HG02258.hp1 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02622.hp2 HG02630.hp2 HG02818.hp2 HG02896.hp2 HG02976.hp2 HG03041.hp1 HG03130.hp2 HG03195.hp1 HG03209.hp1 HG03471.hp2 HG03516.hp2 HG03579.hp2 NA18522.hp1 NA19030.hp1 NA19030.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0013 a0001c0001t0015 others(7): Show a0001c0001t0011 a0001c0001t0013 a0001c0001t0015 a0001c0001t0019 a0001c0001t0021 a0001c0001t0026 a0001c0001t0033 a0001c0001t0034 a0001c0001t0042 a0001c0001t0044	a0001c0001t0011g0013 a0001c0001t0011g0234 a0001c0001t0011g0238 others(15): Show a0001c0001t0011g0013 a0001c0001t0011g0234 a0001c0001t0011g0238 a0001c0001t0011g0239 a0001c0001t0013g0056 a0001c0001t0013g0058 a0001c0001t0013g0059 a0001c0001t0013g0064 a0001c0001t0015g0046 a0001c0001t0015g0268 a0001c0001t0015g0269 a0001c0001t0019g0042 a0001c0001t0021g0055 a0001c0001t0026g0054 a0001c0001t0033g0232 a0001c0001t0034g0068 a0001c0001t0042g0233 a0001c0001t0044g0267	22	358	0.0615	-12	c.92- others(29): Show c.92-13470_92-13459delTTTTTTTTTTTG	VSTM5	ENSG00000214376.6	transcript	ENST00000409977.2	protein_coding	1/3			chr11	TogoVar
VSX2_chr14_74234449_74267738	74244881	AGTGTGTG others(5): Show AGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0253 a0001c0001t0002g0253	1	181	0.0055	-12	c.456 others(27): Show c.456-246_456-235delTGTGTGTGTGTG	VSX2	ENSG00000119614.3	transcript	ENST00000261980.3	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr14	TogoVar
VSX2_chr14_74234449_74267738	74244973	TGTGTGTG others(5): Show TGTGTGTGTGAGA	T T	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG01934.hp2 NA19000.hp1 HG00280.hp1 HG01934.hp2 NA19000.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0005 a0001c0001t0001 a0001c0001t0005	a0001c0001t0001g0032 a0001c0001t0005g0183 a0001c0001t0005g0234 a0001c0001t0001g0032 a0001c0001t0005g0183 a0001c0001t0005g0234	3	415	0.0072	-12	c.456 others(27): Show c.456-190_456-179delTGTGTGTGAGAG	VSX2	ENSG00000119614.3	transcript	ENST00000261980.3	protein_coding	2/4		INFO_REALIGN_3_PRIME	chr14	TogoVar
VTA1_chr6_142142263_142229685	142159477	GGTATTAT others(5): Show GGTATTATTATTA	G G	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0023 a0001c0001t0023	a0001c0001t0023g0282 a0001c0001t0023g0282	1	332	0.0030	-12	c.113 others(29): Show c.113-6750_113-6739delGTATTATTATTA	VTA1	ENSG00000009844.16	transcript	ENST00000367630.9	protein_coding	1/7			chr6	TogoVar
VTA1_chr6_142142263_142229685	142159478	GTATTATT others(5): Show GTATTATTATTAT	G G	intron_variant intron_variant	MODIFIER	HG03453.hp1 HG03516.hp1 HG03579.hp1 others(1): Show HG03453.hp1 HG03516.hp1 HG03579.hp1 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0047 a0001c0001t0048 a0001c0001t0019 a0001c0001t0047 a0001c0001t0048	a0001c0001t0019g0031 a0001c0001t0019g0032 a0001c0001t0047g0030 others(1): Show a0001c0001t0019g0031 a0001c0001t0019g0032 a0001c0001t0047g0030 a0001c0001t0048g0033	4	132	0.0303	-12	c.113 others(29): Show c.113-6709_113-6698delATTATTATTATT	VTA1	ENSG00000009844.16	transcript	ENST00000367630.9	protein_coding	1/7		INFO_REALIGN_3_PRIME	chr6	TogoVar
VTA1_chr6_142142263_142229685	142168740	CATTATTA others(5): Show CATTATTATTATT	C C	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02055.hp1 HG02257.hp1 others(7): Show HG01109.hp1 HG02055.hp1 HG02257.hp1 HG02572.hp2 HG02647.hp1 HG02965.hp2 HG03130.hp1 NA18522.hp1 NA18906.hp1 NA19240.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0009 a0001c0001t0020 a0001c0001t0021 others(2): Show a0001c0001t0009 a0001c0001t0020 a0001c0001t0021 a0001c0001t0044 a0002c0002t0013	a0001c0001t0009g0028 a0001c0001t0009g0029 a0001c0001t0009g0078 others(7): Show a0001c0001t0009g0028 a0001c0001t0009g0029 a0001c0001t0009g0078 a0001c0001t0009g0079 a0001c0001t0020g0027 a0001c0001t0021g0026 a0001c0001t0044g0249 a0002c0002t0013g0136 a0002c0002t0013g0137 a0002c0002t0013g0138	10	162	0.0617	-12	c.208 others(27): Show c.208-779_208-768delATTATTATTATT	VTA1	ENSG00000009844.16	transcript	ENST00000367630.9	protein_coding	2/7		INFO_REALIGN_3_PRIME	chr6	TogoVar

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