Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
PCBP2_chr12_53447102_53486162	53477665	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03195.hp2 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0280 a0001c0001t0002g0280	1	348	0.0029	-13	c.105 others(32): Show c.1053-1724_1053-1712delAAAAAAAAAAAAA	PCBP2	ENSG00000197111.16	transcript	ENST00000546463.6	protein_coding	14/14		INFO_REALIGN_3_PRIME	chr12	TogoVar
PCBP3_chr21_45638725_45947450	45662271	GTTTTTTT others(6): Show GTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00438.hp2 HG00544.hp1 others(85): Show HG00280.hp2 HG00438.hp2 HG00544.hp1 HG00558.hp2 HG00639.hp1 HG00642.hp2 HG00673.hp2 HG00738.hp1 HG00741.hp2 HG01069.hp2 HG01071.hp1 HG01106.hp2 HG01167.hp1 HG01168.hp2 HG01175.hp2 HG01192.hp2 HG01257.hp2 HG01258.hp1 HG01261.hp2 HG01358.hp2 HG01361.hp2 HG01515.hp2 HG01516.hp1 HG01517.hp1 HG01928.hp1 HG01934.hp2 HG01981.hp1 HG02015.hp2 HG02027.hp1 HG02040.hp1 HG02083.hp2 HG02129.hp2 HG02132.hp1 HG02165.hp1 HG02273.hp2 HG02523.hp1 HG02647.hp1 HG02683.hp2 HG02895.hp2 HG02897.hp1 HG03017.hp2 HG03209.hp2 HG03225.hp1 HG03239.hp1 HG03490.hp1 HG03491.hp2 HG03492.hp2 HG03516.hp1 HG03654.hp1 HG03688.hp1 HG03710.hp1 HG03927.hp1 HG04184.hp1 HG04199.hp1 NA18522.hp1 NA18747.hp1 NA18940.hp1 NA18941.hp1 NA18942.hp1 NA18943.hp1 NA18946.hp1 NA18951.hp1 NA18957.hp2 NA18959.hp2 NA18962.hp2 NA18963.hp1 NA18967.hp2 NA18970.hp1 NA18982.hp1 NA18983.hp1 NA18984.hp1 NA18985.hp2 NA18998.hp1 NA19007.hp1 NA19009.hp1 NA19012.hp1 NA19056.hp2 NA19064.hp1 NA19066.hp1 NA19068.hp1 NA19079.hp2 NA19080.hp1 NA19081.hp1 NA19087.hp1 NA19091.hp2 NA19240.hp2 NA20300.hp1 NA20905.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0004	a0001c0001 a0001c0002 a0002c0006 others(2): Show a0001c0001 a0001c0002 a0002c0006 a0003c0005 a0004c0007	a0001c0001t0001 a0001c0001t0010 a0001c0001t0013 others(4): Show a0001c0001t0001 a0001c0001t0010 a0001c0001t0013 a0001c0002t0001 a0002c0006t0001 a0003c0005t0001 a0004c0007t0001	a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 others(85): Show a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0138 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0143 a0001c0001t0001g0147 a0001c0001t0001g0148 a0001c0001t0001g0149 a0001c0001t0001g0151 a0001c0001t0001g0153 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0162 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0175 a0001c0001t0001g0176 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0181 a0001c0001t0001g0183 a0001c0001t0001g0184 a0001c0001t0001g0185 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0188 a0001c0001t0001g0189 a0001c0001t0001g0190 a0001c0001t0001g0192 a0001c0001t0001g0193 a0001c0001t0001g0194 a0001c0001t0001g0198 a0001c0001t0001g0199 a0001c0001t0001g0200 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0204 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0288 a0001c0001t0001g0289 a0001c0001t0010g0195 a0001c0001t0010g0196 a0001c0001t0010g0197 a0001c0001t0013g0180 a0001c0002t0001g0142 a0001c0002t0001g0145 a0001c0002t0001g0146 a0001c0002t0001g0150 a0001c0002t0001g0152 a0002c0006t0001g0174 a0003c0005t0001g0177 a0004c0007t0001g0137	88	292	0.3014	-13	c.-27 others(32): Show c.-278-6585_-278-6573delTTTTTTTTTTTTT	PCBP3	ENSG00000183570.17	transcript	ENST00000681687.1	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr21	TogoVar
PCBP3_chr21_45638725_45947450	45783459	GAAAAGTG others(6): Show GAAAAGTGATTCTC	G G	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01928.hp2 HG01934.hp1 others(28): Show HG01099.hp1 HG01928.hp2 HG01934.hp1 HG01943.hp1 HG02004.hp2 HG02027.hp2 HG02080.hp1 HG02083.hp1 HG02129.hp1 HG02273.hp1 HG02735.hp1 HG02809.hp2 HG03942.hp1 HG04204.hp1 NA18747.hp2 NA18940.hp2 NA18943.hp2 NA18951.hp2 NA18957.hp1 NA18963.hp2 NA18967.hp1 NA18969.hp2 NA18970.hp2 NA18982.hp2 NA18984.hp2 NA18985.hp1 NA19002.hp2 NA19005.hp1 NA19064.hp2 NA19065.hp1 NA19079.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0003 a0001c0001t0021 a0001c0001t0002 a0001c0001t0003 a0001c0001t0021	a0001c0001t0002g0001 a0001c0001t0002g0034 a0001c0001t0002g0072 others(28): Show a0001c0001t0002g0001 a0001c0001t0002g0034 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0089 a0001c0001t0003g0008 a0001c0001t0003g0028 a0001c0001t0003g0032 a0001c0001t0003g0037 a0001c0001t0003g0038 a0001c0001t0003g0039 a0001c0001t0003g0040 a0001c0001t0003g0041 a0001c0001t0003g0042 a0001c0001t0003g0043 a0001c0001t0003g0048 a0001c0001t0003g0051 a0001c0001t0003g0067 a0001c0001t0003g0068 a0001c0001t0003g0069 a0001c0001t0003g0070 a0001c0001t0003g0071 a0001c0001t0003g0074 a0001c0001t0003g0075 a0001c0001t0003g0076 a0001c0001t0003g0077 a0001c0001t0003g0078 a0001c0001t0003g0080 a0001c0001t0003g0081 a0001c0001t0003g0118 a0001c0001t0021g0085	31	292	0.1062	-13	c.-12 others(34): Show c.-126+28009_-126+28021delAAAGTGATTCTCA	PCBP3	ENSG00000183570.17	transcript	ENST00000681687.1	protein_coding	4/17		INFO_REALIGN_3_PRIME	chr21	TogoVar
PCBP3_chr21_45638725_45947450	45913210	GTTTCCGA others(6): Show GTTTCCGACAGAAT	G G	intron_variant intron_variant	MODIFIER	NA18969.hp2 NA18969.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0028 a0001c0001t0003g0028	1	292	0.0034	-13	c.601 others(28): Show c.601-740_601-728delTTTCCGACAGAAT	PCBP3	ENSG00000183570.17	transcript	ENST00000681687.1	protein_coding	11/17			chr21	TogoVar
PCBP4_chr3_51952458_51972454	51968314	ACCTCCCC others(6): Show ACCTCCCCCCACAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00423.hp2 HG00558.hp2 HG01074.hp2 others(11): Show HG00423.hp2 HG00558.hp2 HG01074.hp2 HG02071.hp2 HG02083.hp2 HG02523.hp2 HG04228.hp2 NA18940.hp1 NA18951.hp1 NA18959.hp2 NA18967.hp1 NA18973.hp2 NA19000.hp2 NA19079.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0003 a0001c0002t0001 a0001c0002t0003	a0001c0002t0001g0011 a0001c0002t0001g0022 a0001c0002t0001g0023 others(1): Show a0001c0002t0001g0011 a0001c0002t0001g0022 a0001c0002t0001g0023 a0001c0002t0003g0004	14	312	0.0449	-13	c.-12 others(24): Show c.-1214_-1202delCTGTGGGGGGAGG	PCBP4	ENSG00000090097.22	transcript	ENST00000461554.6	protein_coding		861		chr3	TogoVar
PCCA_chr13_100084093_100535435	100179700	CCTCTTCC others(6): Show CCTCTTCCCACAAT	C C	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00735.hp2 HG00738.hp2 others(27): Show HG00639.hp1 HG00735.hp2 HG00738.hp2 HG01099.hp2 HG01169.hp1 HG01175.hp1 HG01346.hp1 HG01358.hp1 HG01884.hp2 HG01928.hp1 HG02055.hp1 HG02145.hp1 HG02615.hp1 HG02723.hp2 HG02735.hp1 HG02965.hp1 HG02965.hp2 HG03041.hp1 HG03098.hp1 HG03195.hp2 HG03490.hp1 HG03654.hp2 HG03710.hp2 HG03834.hp1 HG03942.hp1 HG04204.hp2 HG04228.hp2 HG06807.hp1 HG06807.hp2 NA18522.hp2	a0001 a0003 a0008 a0001 a0003 a0008	a0001c0001 a0001c0002 a0003c0009 others(1): Show a0001c0001 a0001c0002 a0003c0009 a0008c0008	a0001c0001t0001 a0001c0001t0005 a0001c0002t0001 others(3): Show a0001c0001t0001 a0001c0001t0005 a0001c0002t0001 a0001c0002t0003 a0003c0009t0001 a0008c0008t0001	a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0071 others(27): Show a0001c0001t0001g0035 a0001c0001t0001g0036 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0088 a0001c0001t0001g0116 a0001c0001t0001g0119 a0001c0001t0001g0139 a0001c0001t0001g0140 a0001c0001t0001g0170 a0001c0001t0005g0030 a0001c0002t0001g0073 a0001c0002t0001g0078 a0001c0002t0001g0082 a0001c0002t0001g0085 a0001c0002t0001g0086 a0001c0002t0001g0087 a0001c0002t0001g0093 a0001c0002t0001g0094 a0001c0002t0001g0095 a0001c0002t0001g0102 a0001c0002t0001g0104 a0001c0002t0001g0106 a0001c0002t0001g0107 a0001c0002t0001g0108 a0001c0002t0003g0080 a0003c0009t0001g0101 a0008c0008t0001g0103	30	174	0.1724	-13	c.468 others(32): Show c.468+22361_468+22373delCTCTTCCCACAAT	PCCA	ENSG00000175198.17	transcript	ENST00000376285.6	protein_coding	6/23			chr13	TogoVar
PCCA_chr13_100084093_100535435	100400620	CTTTTTAG others(6): Show CTTTTTAGTTCTTT	C C	intron_variant intron_variant	MODIFIER	HG00639.hp2 HG01168.hp2 HG01169.hp2 others(3): Show HG00639.hp2 HG01168.hp2 HG01169.hp2 HG04184.hp2 HG04199.hp1 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0025 a0001c0001t0001g0032 a0001c0001t0001g0042 others(3): Show a0001c0001t0001g0025 a0001c0001t0001g0032 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0047	6	174	0.0345	-13	c.174 others(34): Show c.1747-25007_1747-24995delAGTTCTTTTTTTT	PCCA	ENSG00000175198.17	transcript	ENST00000376285.6	protein_coding	19/23		INFO_REALIGN_3_PRIME	chr13	TogoVar
PCCA_chr13_100084093_100535435	100422065	TTTTCTTT others(6): Show TTTTCTTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG00621.hp2 HG02148.hp1 NA18522.hp2 others(1): Show HG00621.hp2 HG02148.hp1 NA18522.hp2 NA18956.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0023 a0001c0001t0001g0084 a0001c0001t0001g0090 others(1): Show a0001c0001t0001g0023 a0001c0001t0001g0084 a0001c0001t0001g0090 a0001c0001t0001g0124	4	174	0.0230	-13	c.174 others(32): Show c.1747-3560_1747-3548delTCTTTCTTTCTTT	PCCA	ENSG00000175198.17	transcript	ENST00000376285.6	protein_coding	19/23		INFO_REALIGN_3_PRIME	chr13	TogoVar
PCCA_chr13_100084093_100535435	100482574	AGGTTTTT others(6): Show AGGTTTTTTGTTTT	A A	intron_variant intron_variant	MODIFIER	HG02572.hp1 HG02895.hp2 HG02896.hp2 others(2): Show HG02572.hp1 HG02895.hp2 HG02896.hp2 HG02897.hp1 HG02897.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0001 a0002c0003t0001 a0001c0001t0001 a0002c0003t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0005 others(2): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0005 a0002c0003t0001g0063 a0002c0003t0001g0064	5	174	0.0287	-13	c.190 others(34): Show c.1900-32840_1900-32828delTGGTTTTTTGTTT	PCCA	ENSG00000175198.17	transcript	ENST00000376285.6	protein_coding	21/23		INFO_REALIGN_3_PRIME	chr13	TogoVar
PCCB_chr3_136245340_136335169	136254536	TTTTTTTT others(6): Show TTTTTTTTTTTTTA	T T	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0013 a0001c0001t0001g0013	1	300	0.0033	-13	c.184 others(30): Show c.184-1319_184-1307delTTTTTTTTTTTTA	PCCB	ENSG00000114054.14	transcript	ENST00000251654.9	protein_coding	1/14			chr3	TogoVar
PCDH11X_chrX_91774375_92628230	91917569	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	NA19082.hp1 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0019 a0001c0001t0019	a0001c0001t0019g0065 a0001c0001t0019g0065	1	154	0.0065	-13	c.303 others(34): Show c.3033+38311_3033+38323delAAAAAAAAAAAAA	PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	6/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92087945	TATATATA others(6): Show TATATATATAAGAA	T T	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG02055.hp1 HG02451.hp1 others(7): Show HG01069.hp1 HG02055.hp1 HG02451.hp1 HG02572.hp1 HG02809.hp1 HG03041.hp2 HG03195.hp1 HG06807.hp2 NA18522.hp1 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0009 a0001c0001 a0001c0009	a0001c0001t0002 a0001c0001t0006 a0001c0001t0008 others(3): Show a0001c0001t0002 a0001c0001t0006 a0001c0001t0008 a0001c0001t0024 a0001c0001t0029 a0001c0009t0031	a0001c0001t0002g0018 a0001c0001t0002g0049 a0001c0001t0002g0062 others(7): Show a0001c0001t0002g0018 a0001c0001t0002g0049 a0001c0001t0002g0062 a0001c0001t0002g0085 a0001c0001t0002g0154 a0001c0001t0006g0003 a0001c0001t0008g0058 a0001c0001t0024g0014 a0001c0001t0029g0024 a0001c0009t0031g0044	10	154	0.0649	-13	c.303 others(36): Show c.3034-113392_3034-113380delAAATATATATAAG	PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	6/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92120155	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03471.hp1 HG03471.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0046 a0001c0001t0006g0046	1	154	0.0065	-13	c.303 others(34): Show c.3034-81209_3034-81197delTTTTTTTTTTTTT	PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	6/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92412505	AATAGTAT others(6): Show AATAGTATATATAT	A A	intron_variant intron_variant	MODIFIER	HG03453.hp2 HG03453.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0012 a0001c0002t0002g0012	1	154	0.0065	-13	c.334 others(34): Show c.3343+24576_3343+24588delGTATATATATATA	PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	9/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92419669	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00673.hp1 NA18995.hp1 NA19079.hp1 HG00673.hp1 NA18995.hp1 NA19079.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0031 a0001c0001t0001g0071 a0001c0001t0001g0125 a0001c0001t0001g0031 a0001c0001t0001g0071 a0001c0001t0001g0125	3	154	0.0195	-13	c.334 others(34): Show c.3343+31753_3343+31765delTTTTTTTTTTTTT	PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	9/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92452486	TATATATA others(6): Show TATATATATATATG	T T	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01496.hp2 HG02615.hp1 others(6): Show HG01109.hp1 HG01496.hp2 HG02615.hp1 HG02698.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03540.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 a0001c0001t0025 a0001c0002t0002 a0001c0002t0006	a0001c0001t0001g0140 a0001c0001t0002g0001 a0001c0001t0002g0130 others(6): Show a0001c0001t0001g0140 a0001c0001t0002g0001 a0001c0001t0002g0130 a0001c0001t0006g0022 a0001c0001t0007g0017 a0001c0001t0025g0059 a0001c0002t0002g0008 a0001c0002t0002g0011 a0001c0002t0006g0007	9	154	0.0584	-13	c.334 others(34): Show c.3344-15812_3344-15800delATATATATATATG	PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	9/10			chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92481288	ACACACAC others(6): Show ACACACACACACCC	A A	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG01106.hp1 others(10): Show HG00140.hp1 HG00280.hp1 HG01106.hp1 HG01192.hp1 HG01943.hp1 HG02300.hp1 HG02572.hp1 HG03239.hp1 HG04228.hp1 NA18949.hp2 NA19070.hp1 NA19083.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 others(3): Show a0001c0001t0003 a0001c0001t0004 a0001c0001t0006 a0001c0001t0007 a0001c0001t0026 a0001c0003t0002	a0001c0001t0003g0093 a0001c0001t0003g0139 a0001c0001t0004g0063 others(10): Show a0001c0001t0003g0093 a0001c0001t0003g0139 a0001c0001t0004g0063 a0001c0001t0004g0082 a0001c0001t0004g0090 a0001c0001t0004g0112 a0001c0001t0004g0137 a0001c0001t0006g0003 a0001c0001t0007g0037 a0001c0001t0007g0086 a0001c0001t0007g0122 a0001c0001t0026g0138 a0001c0003t0002g0143	13	154	0.0844	-13	c.336 others(34): Show c.3367+12978_3367+12990delCCCACACACACAC	PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	10/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11X_chrX_91774375_92628230	92499636	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG02615.hp1 HG03195.hp2 others(4): Show HG01261.hp1 HG02615.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03540.hp2 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 others(4): Show a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 a0001c0001t0015 a0001c0001t0025 a0001c0002t0002 a0001c0002t0006	a0001c0001t0002g0001 a0001c0001t0006g0022 a0001c0001t0007g0017 others(4): Show a0001c0001t0002g0001 a0001c0001t0006g0022 a0001c0001t0007g0017 a0001c0001t0015g0084 a0001c0001t0025g0059 a0001c0002t0002g0008 a0001c0002t0006g0007	7	154	0.0455	-13	c.336 others(34): Show c.3367+31347_3367+31359delAAAAAAAAAAAAA	PCDH11X	ENSG00000102290.23	transcript	ENST00000682573.1	protein_coding	10/10		INFO_REALIGN_3_PRIME	chrX	TogoVar
PCDH11Y_chrY_4995296_5747224	5312544	TATATATA others(6): Show TATATATATAAGAA	T T	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG02056.hp1 NA19004.hp1 HG01106.hp1 HG02056.hp1 NA19004.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0038 a0001c0001t0001g0067 a0001c0001t0001g0101 a0001c0001t0001g0038 a0001c0001t0001g0067 a0001c0001t0001g0101	3	115	0.0261	-13	c.285 others(36): Show c.2854-188449_2854-188437delAAATATATATAAG	PCDH11Y	ENSG00000099715.15	transcript	ENST00000698851.1	protein_coding	3/5		INFO_REALIGN_3_PRIME	chrY	TogoVar
PCDH15_chr10_53797771_54806231	54104845	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0029 a0029	a0029c0026 a0029c0026	a0029c0026t0008 a0029c0026t0008	a0029c0026t0008g0081 a0029c0026t0008g0081	1	102	0.0098	-13	c.191 others(34): Show c.1918-14795_1918-14783delTTTTTTTTTTTTT	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	15/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54146922	GTATATAT others(6): Show GTATATATATATAA	G G	intron_variant intron_variant	MODIFIER	HG03540.hp1 HG06807.hp2 HG03540.hp1 HG06807.hp2	a0002 a0003 a0002 a0003	a0002c0002 a0003c0003 a0002c0002 a0003c0003	a0002c0002t0004 a0003c0003t0019 a0002c0002t0004 a0003c0003t0019	a0002c0002t0004g0077 a0003c0003t0019g0060 a0002c0002t0004g0077 a0003c0003t0019g0060	2	102	0.0196	-13	c.178 others(32): Show c.1784+6165_1784+6177delTTATATATATATA	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	14/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54242129	TTTATATA others(6): Show TTTATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG01261.hp1 HG01261.hp1	a0009 a0009	a0009c0008 a0009c0008	a0009c0008t0001 a0009c0008t0001	a0009c0008t0001g0048 a0009c0008t0001g0048	1	102	0.0098	-13	c.877 others(30): Show c.877-5211_877-5199delTATATATATATAA	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	8/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54316562	ACACACAC others(6): Show ACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG01069.hp1 HG01167.hp1 HG01192.hp1 others(13): Show HG01069.hp1 HG01167.hp1 HG01192.hp1 HG02109.hp1 HG02145.hp1 HG02602.hp1 HG02615.hp2 HG02896.hp2 HG03139.hp2 HG03492.hp2 HG03579.hp1 HG03942.hp2 HG04184.hp2 HG06807.hp2 NA19043.hp1 NA20905.hp2	a0001 a0002 a0003 others(9): Show a0001 a0002 a0003 a0005 a0006 a0007 a0008 a0014 a0025 a0027 a0031 a0033	a0001c0001 a0002c0002 a0003c0003 others(9): Show a0001c0001 a0002c0002 a0003c0003 a0005c0005 a0006c0006 a0007c0010 a0008c0007 a0014c0033 a0025c0027 a0027c0018 a0031c0017 a0033c0037	a0001c0001t0008 a0001c0001t0014 a0002c0002t0004 others(12): Show a0001c0001t0008 a0001c0001t0014 a0002c0002t0004 a0003c0003t0002 a0003c0003t0009 a0005c0005t0002 a0005c0005t0005 a0006c0006t0005 a0007c0010t0001 a0008c0007t0003 a0014c0033t0017 a0025c0027t0001 a0027c0018t0001 a0031c0017t0002 a0033c0037t0013	a0001c0001t0008g0003 a0001c0001t0014g0067 a0001c0001t0014g0074 others(13): Show a0001c0001t0008g0003 a0001c0001t0014g0067 a0001c0001t0014g0074 a0002c0002t0004g0077 a0003c0003t0002g0020 a0003c0003t0009g0018 a0005c0005t0002g0094 a0005c0005t0005g0036 a0006c0006t0005g0055 a0007c0010t0001g0091 a0008c0007t0003g0065 a0014c0033t0017g0023 a0025c0027t0001g0080 a0027c0018t0001g0004 a0031c0017t0002g0072 a0033c0037t0013g0062	16	102	0.1569	-13	c.876 others(28): Show c.876+696_876+708delGTGTGTGTGTGTG	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	8/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54421834	ATATACAC others(6): Show ATATACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG06807.hp2 HG02145.hp1 HG06807.hp2	a0002 a0003 a0002 a0003	a0002c0002 a0003c0003 a0002c0002 a0003c0003	a0002c0002t0004 a0003c0003t0009 a0002c0002t0004 a0003c0003t0009	a0002c0002t0004g0077 a0003c0003t0009g0018 a0002c0002t0004g0077 a0003c0003t0009g0018	2	102	0.0196	-13	c.158 others(32): Show c.158-42905_158-42893delGTGTGTGTGTATA	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	3/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54547107	CATTTTTC others(6): Show CATTTTTCTGCTCA	C C	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00735.hp2 HG01192.hp1 others(7): Show HG00642.hp2 HG00735.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01884.hp2 HG03041.hp2 HG03098.hp1 HG06807.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0007 a0015 a0016 a0017	a0001c0001 a0002c0002 a0003c0003 others(4): Show a0001c0001 a0002c0002 a0003c0003 a0007c0010 a0015c0023 a0016c0020 a0017c0024	a0001c0001t0002 a0001c0001t0003 a0002c0002t0004 others(6): Show a0001c0001t0002 a0001c0001t0003 a0002c0002t0004 a0002c0002t0009 a0003c0003t0003 a0007c0010t0001 a0015c0023t0026 a0016c0020t0007 a0017c0024t0001	a0001c0001t0002g0070 a0001c0001t0003g0098 a0002c0002t0004g0077 others(7): Show a0001c0001t0002g0070 a0001c0001t0003g0098 a0002c0002t0004g0077 a0002c0002t0009g0027 a0003c0003t0003g0092 a0007c0010t0001g0068 a0007c0010t0001g0091 a0015c0023t0026g0082 a0016c0020t0007g0083 a0017c0024t0001g0053	10	102	0.0980	-13	c.92- others(30): Show c.92-19243_92-19231delTGAGCAGAAAAAT	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	2/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54559867	AAAAAAAA others(6): Show AAAAAAAAGAAAAG	A A	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0006 a0006	a0006c0006 a0006c0006	a0006c0006t0010 a0006c0006t0010	a0006c0006t0010g0030 a0006c0006t0010g0030	1	102	0.0098	-13	c.92- others(30): Show c.92-32003_92-31991delCTTTTCTTTTTTT	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	2/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54636445	CATACTGT others(6): Show CATACTGTAAAACT	C C	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00735.hp2 HG00738.hp1 others(19): Show HG00642.hp2 HG00735.hp2 HG00738.hp1 HG00741.hp1 HG01081.hp1 HG01192.hp1 HG02027.hp1 HG02027.hp2 HG02145.hp2 HG02280.hp1 HG02602.hp2 HG03139.hp2 HG03225.hp1 HG03492.hp1 HG03669.hp2 HG03710.hp1 HG03942.hp2 NA18906.hp2 NA19043.hp1 NA19043.hp2 NA19088.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(8): Show a0001 a0002 a0003 a0004 a0006 a0007 a0008 a0011 a0013 a0018 a0027	a0001c0001 a0002c0002 a0003c0003 others(8): Show a0001c0001 a0002c0002 a0003c0003 a0004c0004 a0006c0006 a0007c0010 a0008c0007 a0011c0038 a0013c0014 a0018c0028 a0027c0018	a0001c0001t0001 a0001c0001t0002 a0001c0001t0014 others(15): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0014 a0002c0002t0002 a0002c0002t0023 a0003c0003t0001 a0003c0003t0002 a0003c0003t0003 a0004c0004t0001 a0004c0004t0002 a0004c0004t0006 a0006c0006t0006 a0007c0010t0001 a0008c0007t0022 a0011c0038t0001 a0013c0014t0001 a0018c0028t0004 a0027c0018t0001	a0001c0001t0001g0039 a0001c0001t0001g0089 a0001c0001t0002g0070 others(19): Show a0001c0001t0001g0039 a0001c0001t0001g0089 a0001c0001t0002g0070 a0001c0001t0014g0074 a0002c0002t0002g0063 a0002c0002t0023g0034 a0003c0003t0001g0009 a0003c0003t0002g0020 a0003c0003t0003g0033 a0003c0003t0003g0092 a0004c0004t0001g0045 a0004c0004t0001g0059 a0004c0004t0002g0096 a0004c0004t0006g0026 a0006c0006t0006g0046 a0007c0010t0001g0068 a0007c0010t0001g0091 a0008c0007t0022g0075 a0011c0038t0001g0040 a0013c0014t0001g0012 a0018c0028t0004g0013 a0027c0018t0001g0004	22	102	0.2157	-13	c.91+ others(30): Show c.91+27714_91+27726delAGTTTTACAGTAT	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	2/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54752517	CAAACAAA others(6): Show CAAACAAACAAACA	C C	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01081.hp1 HG01934.hp2 others(11): Show HG00735.hp1 HG01081.hp1 HG01934.hp2 HG02109.hp1 HG02145.hp1 HG02258.hp1 HG02258.hp2 HG02615.hp2 HG02965.hp2 HG03139.hp1 HG03225.hp1 HG04184.hp2 HG06807.hp2 NA18906.hp1	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0005 a0008 a0013 a0019	a0001c0001 a0002c0002 a0003c0003 others(4): Show a0001c0001 a0002c0002 a0003c0003 a0005c0005 a0008c0007 a0013c0014 a0019c0019	a0001c0001t0001 a0001c0001t0004 a0001c0001t0008 others(10): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0008 a0002c0002t0004 a0002c0002t0008 a0003c0003t0001 a0003c0003t0004 a0003c0003t0009 a0005c0005t0005 a0008c0007t0002 a0008c0007t0003 a0013c0014t0001 a0019c0019t0015	a0001c0001t0001g0089 a0001c0001t0004g0031 a0001c0001t0008g0003 others(11): Show a0001c0001t0001g0089 a0001c0001t0004g0031 a0001c0001t0008g0003 a0002c0002t0004g0041 a0002c0002t0004g0077 a0002c0002t0008g0019 a0003c0003t0001g0017 a0003c0003t0004g0088 a0003c0003t0009g0018 a0005c0005t0005g0036 a0008c0007t0002g0011 a0008c0007t0003g0065 a0013c0014t0001g0012 a0019c0019t0015g0001	14	102	0.1373	-13	c.-29 others(32): Show c.-29+48395_-29+48407delTGTTTGTTTGTTT	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	1/37			chr10	TogoVar
PCDH15_chr10_53797771_54806231	54774007	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00642.hp2 NA19043.hp1 homoSapiens_chm13v2.hp1 HG00642.hp2 NA19043.hp1 homoSapiens_chm13v2.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0007c0010 a0001c0001 a0007c0010	a0001c0001t0002 a0001c0001t0014 a0007c0010t0001 a0001c0001t0002 a0001c0001t0014 a0007c0010t0001	a0001c0001t0002g0070 a0001c0001t0014g0074 a0007c0010t0001g0068 a0001c0001t0002g0070 a0001c0001t0014g0074 a0007c0010t0001g0068	3	102	0.0294	-13	c.-29 others(32): Show c.-29+26905_-29+26917delAAAAAAAAAAAAA	PCDH15	ENSG00000150275.20	transcript	ENST00000644397.2	protein_coding	1/37			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54104845	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03225.hp2	a0022 a0022	a0022c0033 a0022c0033	a0022c0033t0001 a0022c0033t0001	a0022c0033t0001g0073 a0022c0033t0001g0073	1	94	0.0106	-13	c.191 others(34): Show c.1918-14795_1918-14783delTTTTTTTTTTTTT	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	15/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54146922	GTATATAT others(6): Show GTATATATATATAA	G G	intron_variant intron_variant	MODIFIER	HG03540.hp1 HG06807.hp1 HG03540.hp1 HG06807.hp1	a0002 a0025 a0002 a0025	a0002c0002 a0025c0026 a0002c0002 a0025c0026	a0002c0002t0002 a0025c0026t0001 a0002c0002t0002 a0025c0026t0001	a0002c0002t0002g0071 a0025c0026t0001g0056 a0002c0002t0002g0071 a0025c0026t0001g0056	2	94	0.0213	-13	c.178 others(32): Show c.1784+6165_1784+6177delTTATATATATATA	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	14/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54242129	TTTATATA others(6): Show TTTATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01261.hp2	a0009 a0009	a0009c0019 a0009c0019	a0009c0019t0001 a0009c0019t0001	a0009c0019t0001g0045 a0009c0019t0001g0045	1	94	0.0106	-13	c.877 others(30): Show c.877-5211_877-5199delTATATATATATAA	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	8/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54316562	ACACACAC others(6): Show ACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG01069.hp2 HG01192.hp1 HG02145.hp2 others(10): Show HG01069.hp2 HG01192.hp1 HG02145.hp2 HG02602.hp1 HG02615.hp2 HG03139.hp2 HG03492.hp2 HG03579.hp1 HG03942.hp2 HG04184.hp1 HG06807.hp1 NA19043.hp2 NA20905.hp1	a0001 a0002 a0003 others(6): Show a0001 a0002 a0003 a0005 a0006 a0007 a0020 a0024 a0027	a0001c0001 a0002c0002 a0003c0005 others(8): Show a0001c0001 a0002c0002 a0003c0005 a0003c0025 a0005c0009 a0005c0035 a0006c0008 a0007c0010 a0020c0022 a0024c0021 a0027c0043	a0001c0001t0001 a0002c0002t0002 a0003c0005t0001 others(8): Show a0001c0001t0001 a0002c0002t0002 a0003c0005t0001 a0003c0025t0001 a0005c0009t0001 a0005c0035t0001 a0006c0008t0001 a0007c0010t0003 a0020c0022t0001 a0024c0021t0001 a0027c0043t0004	a0001c0001t0001g0003 a0001c0001t0001g0083 a0002c0002t0002g0071 others(10): Show a0001c0001t0001g0003 a0001c0001t0001g0083 a0002c0002t0002g0071 a0003c0005t0001g0020 a0003c0025t0001g0018 a0005c0009t0001g0033 a0005c0035t0001g0086 a0006c0008t0001g0053 a0007c0010t0003g0061 a0007c0010t0003g0068 a0020c0022t0001g0004 a0024c0021t0001g0066 a0027c0043t0004g0058	13	94	0.1383	-13	c.876 others(28): Show c.876+696_876+708delGTGTGTGTGTGTG	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	8/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54421834	ATATACAC others(6): Show ATATACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG06807.hp1 HG02145.hp2 HG06807.hp1	a0002 a0003 a0002 a0003	a0002c0002 a0003c0025 a0002c0002 a0003c0025	a0002c0002t0002 a0003c0025t0001 a0002c0002t0002 a0003c0025t0001	a0002c0002t0002g0071 a0003c0025t0001g0018 a0002c0002t0002g0071 a0003c0025t0001g0018	2	94	0.0213	-13	c.158 others(32): Show c.158-42905_158-42893delGTGTGTGTGTATA	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	3/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54547107	CATTTTTC others(6): Show CATTTTTCTGCTCA	C C	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00735.hp2 HG01192.hp1 others(7): Show HG00642.hp1 HG00735.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp2 HG01884.hp2 HG03041.hp1 HG03098.hp1 HG06807.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0012	a0001c0001 a0001c0007 a0002c0002 others(5): Show a0001c0001 a0001c0007 a0002c0002 a0002c0006 a0002c0029 a0003c0003 a0003c0005 a0012c0031	a0001c0001t0001 a0001c0007t0001 a0002c0002t0002 others(5): Show a0001c0001t0001 a0001c0007t0001 a0002c0002t0002 a0002c0006t0005 a0002c0029t0001 a0003c0003t0001 a0003c0005t0001 a0012c0031t0001	a0001c0001t0001g0062 a0001c0001t0001g0064 a0001c0001t0001g0083 others(7): Show a0001c0001t0001g0062 a0001c0001t0001g0064 a0001c0001t0001g0083 a0001c0007t0001g0090 a0002c0002t0002g0071 a0002c0006t0005g0074 a0002c0029t0001g0024 a0003c0003t0001g0084 a0003c0005t0001g0075 a0012c0031t0001g0051	10	94	0.1064	-13	c.92- others(30): Show c.92-19243_92-19231delTGAGCAGAAAAAT	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	2/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54559867	AAAAAAAA others(6): Show AAAAAAAAGAAAAG	A A	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0006 a0006	a0006c0008 a0006c0008	a0006c0008t0001 a0006c0008t0001	a0006c0008t0001g0027 a0006c0008t0001g0027	1	94	0.0106	-13	c.92- others(30): Show c.92-32003_92-31991delCTTTTCTTTTTTT	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	2/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54636445	CATACTGT others(6): Show CATACTGTAAAACT	C C	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00735.hp2 HG00738.hp2 others(19): Show HG00642.hp1 HG00735.hp2 HG00738.hp2 HG00741.hp1 HG01081.hp2 HG01192.hp1 HG02027.hp1 HG02027.hp2 HG02145.hp1 HG02280.hp1 HG02602.hp2 HG03139.hp2 HG03225.hp1 HG03492.hp1 HG03669.hp2 HG03710.hp2 HG03942.hp2 NA18906.hp2 NA19043.hp1 NA19043.hp2 NA19088.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(7): Show a0001 a0002 a0003 a0004 a0006 a0007 a0008 a0010 a0013 a0020	a0001c0001 a0002c0002 a0002c0006 others(10): Show a0001c0001 a0002c0002 a0002c0006 a0003c0003 a0003c0005 a0004c0004 a0004c0044 a0006c0008 a0007c0010 a0008c0016 a0010c0014 a0013c0034 a0020c0022	a0001c0001t0001 a0002c0002t0009 a0002c0006t0001 others(10): Show a0001c0001t0001 a0002c0002t0009 a0002c0006t0001 a0003c0003t0001 a0003c0005t0001 a0004c0004t0001 a0004c0044t0001 a0006c0008t0001 a0007c0010t0003 a0008c0016t0001 a0010c0014t0001 a0013c0034t0003 a0020c0022t0001	a0001c0001t0001g0036 a0001c0001t0001g0062 a0001c0001t0001g0064 others(19): Show a0001c0001t0001g0036 a0001c0001t0001g0062 a0001c0001t0001g0064 a0001c0001t0001g0081 a0001c0001t0001g0083 a0002c0002t0009g0031 a0002c0006t0001g0059 a0003c0003t0001g0009 a0003c0003t0001g0030 a0003c0003t0001g0084 a0003c0005t0001g0020 a0004c0004t0001g0023 a0004c0004t0001g0037 a0004c0004t0001g0042 a0004c0004t0001g0055 a0004c0044t0001g0088 a0006c0008t0001g0043 a0007c0010t0003g0068 a0008c0016t0001g0012 a0010c0014t0001g0069 a0013c0034t0003g0013 a0020c0022t0001g0004	22	94	0.2340	-13	c.91+ others(30): Show c.91+27714_91+27726delAGTTTTACAGTAT	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	2/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54752517	CAAACAAA others(6): Show CAAACAAACAAACA	C C	intron_variant intron_variant	MODIFIER	HG00735.hp1 HG01081.hp2 HG01934.hp2 others(10): Show HG00735.hp1 HG01081.hp2 HG01934.hp2 HG02145.hp2 HG02258.hp1 HG02258.hp2 HG02615.hp2 HG02965.hp1 HG03139.hp1 HG03225.hp1 HG04184.hp1 HG06807.hp1 NA18906.hp1	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0005 a0008 a0010 a0014	a0001c0001 a0002c0002 a0003c0003 others(5): Show a0001c0001 a0002c0002 a0003c0003 a0003c0025 a0005c0009 a0008c0016 a0010c0013 a0014c0023	a0001c0001t0001 a0001c0001t0002 a0002c0002t0002 others(7): Show a0001c0001t0001 a0001c0001t0002 a0002c0002t0002 a0003c0003t0001 a0003c0003t0002 a0003c0025t0001 a0005c0009t0001 a0008c0016t0001 a0010c0013t0001 a0014c0023t0006	a0001c0001t0001g0003 a0001c0001t0001g0081 a0001c0001t0002g0028 others(10): Show a0001c0001t0001g0003 a0001c0001t0001g0081 a0001c0001t0002g0028 a0002c0002t0002g0019 a0002c0002t0002g0038 a0002c0002t0002g0071 a0003c0003t0001g0017 a0003c0003t0002g0080 a0003c0025t0001g0018 a0005c0009t0001g0033 a0008c0016t0001g0012 a0010c0013t0001g0011 a0014c0023t0006g0001	13	94	0.1383	-13	c.-29 others(32): Show c.-29+48395_-29+48407delTGTTTGTTTGTTT	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	1/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54774007	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00642.hp1 NA19043.hp2 homoSapiens_chm13v2.hp1 HG00642.hp1 NA19043.hp2 homoSapiens_chm13v2.hp1	a0001 a0007 a0001 a0007	a0001c0001 a0007c0010 a0001c0001 a0007c0010	a0001c0001t0001 a0007c0010t0003 a0001c0001t0001 a0007c0010t0003	a0001c0001t0001g0062 a0001c0001t0001g0064 a0007c0010t0003g0068 a0001c0001t0001g0062 a0001c0001t0001g0064 a0007c0010t0003g0068	3	94	0.0319	-13	c.-29 others(32): Show c.-29+26905_-29+26917delAAAAAAAAAAAAA	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	1/32			chr10	TogoVar
PCDH17_chr13_57626744_57734311	57641558	GAAAAAAA others(6): Show GAAAAAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG02129.hp1 HG02615.hp1 others(15): Show HG00544.hp1 HG02129.hp1 HG02615.hp1 HG03209.hp1 HG03239.hp1 NA18949.hp1 NA18956.hp1 NA18980.hp1 NA18981.hp1 NA18990.hp2 NA18998.hp1 NA18999.hp2 NA19000.hp2 NA19009.hp2 NA19030.hp1 NA19030.hp2 NA19056.hp2 NA19083.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0015 a0001c0001t0023 a0001c0001t0038	a0001c0001t0001g0175 a0001c0001t0001g0257 a0001c0001t0001g0271 others(15): Show a0001c0001t0001g0175 a0001c0001t0001g0257 a0001c0001t0001g0271 a0001c0001t0002g0145 a0001c0001t0002g0179 a0001c0001t0002g0255 a0001c0001t0002g0256 a0001c0001t0002g0270 a0001c0001t0002g0298 a0001c0001t0003g0273 a0001c0001t0004g0177 a0001c0001t0007g0180 a0001c0001t0007g0181 a0001c0001t0015g0013 a0001c0001t0015g0014 a0001c0001t0023g0176 a0001c0001t0023g0178 a0001c0001t0038g0272	18	310	0.0581	-13	c.256 others(32): Show c.2565+6465_2565+6477delAAAAAAAAAAAAA	PCDH17	ENSG00000118946.12	transcript	ENST00000377918.8	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr13	TogoVar
PCDH17_chr13_57626744_57734311	57641576	AAAAAAAA others(6): Show AAAAAAAAAAAAAT	A A	intron_variant intron_variant	MODIFIER	NA18959.hp1 NA18959.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0252 a0001c0001t0002g0252	1	310	0.0032	-13	c.256 others(32): Show c.2565+6467_2565+6479delAAAAAAAAAAATA	PCDH17	ENSG00000118946.12	transcript	ENST00000377918.8	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr13	TogoVar
PCDH17_chr13_57626744_57734311	57641578	AAAAAAAA others(6): Show AAAAAAAAAAATAT	A A	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0128 a0001c0001t0002g0128	1	310	0.0032	-13	c.256 others(32): Show c.2565+6469_2565+6481delAAAAAAAAATATA	PCDH17	ENSG00000118946.12	transcript	ENST00000377918.8	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr13	TogoVar
PCDH18_chr4_137513918_137537494	137517550	TTTATTTT others(6): Show TTTATTTTATTTTA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0085 a0001c0002t0003g0085	1	406	0.0025	-13	c.34 others(24): Show c.3466_*3478delTAAAATAAAATAA	PCDH18	ENSG00000189184.12	transcript	ENST00000344876.9	protein_coding		1367		chr4	TogoVar
PCDH19_chrX_100286644_100415273	100376252	AAAGAAAA others(6): Show AAAGAAAAGAAAAG	A A	intron_variant intron_variant	MODIFIER	HG03834.hp1 HG03834.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0056 a0001c0002t0004g0056	1	281	0.0036	-13	c.261 others(34): Show c.2617-25561_2617-25549delCTTTTCTTTTCTT	PCDH19	ENSG00000165194.15	transcript	ENST00000373034.8	protein_coding	3/5			chrX	TogoVar
PCDH19_chrX_100286644_100415273	100379334	CACACACA others(6): Show CACACACACACACA	C C	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02109.hp2 HG02257.hp2 others(12): Show HG01243.hp1 HG02109.hp2 HG02257.hp2 HG02559.hp2 HG02615.hp1 HG02630.hp2 HG02647.hp1 HG02723.hp2 HG02818.hp2 HG02897.hp1 HG03139.hp1 HG03195.hp2 HG03453.hp1 HG03540.hp2 NA20752.hp1	a0001 a0001	a0001c0001 a0001c0018 a0001c0001 a0001c0018	a0001c0001t0002 a0001c0001t0011 a0001c0001t0031 others(2): Show a0001c0001t0002 a0001c0001t0011 a0001c0001t0031 a0001c0001t0034 a0001c0018t0002	a0001c0001t0002g0115 a0001c0001t0002g0130 a0001c0001t0002g0131 others(12): Show a0001c0001t0002g0115 a0001c0001t0002g0130 a0001c0001t0002g0131 a0001c0001t0002g0132 a0001c0001t0002g0133 a0001c0001t0002g0134 a0001c0001t0002g0135 a0001c0001t0002g0137 a0001c0001t0002g0138 a0001c0001t0011g0114 a0001c0001t0011g0140 a0001c0001t0011g0141 a0001c0001t0031g0139 a0001c0001t0034g0136 a0001c0018t0002g0152	15	281	0.0534	-13	c.261 others(34): Show c.2616+23177_2616+23189delTGTGTGTGTGTGT	PCDH19	ENSG00000165194.15	transcript	ENST00000373034.8	protein_coding	3/5			chrX	TogoVar
PCDH20_chr13_61404685_61420849	61416174	CTCCTTCC others(6): Show CTCCTTCCTTCCTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02155.hp1 HG02155.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	458	0.0022	-13	c.-10 others(24): Show c.-1029_-1017delAAGGAAGGAAGGA	PCDH20	ENSG00000280165.2	transcript	ENST00000409204.5	protein_coding		326		chr13	TogoVar
PCDH7_chr4_30715369_31151800	30824074	GTTTCTTT others(6): Show GTTTCTTTTCTTTC	G G	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG00544.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0027 a0001c0001t0027	a0001c0001t0027g0031 a0001c0001t0027g0031	1	214	0.0047	-13	c.317 others(34): Show c.3175-96071_3175-96059delTCTTTCTTTCTTT	PCDH7	ENSG00000169851.16	transcript	ENST00000695919.1	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr4	TogoVar
PCDH7_chr4_30715369_31151800	30835598	GTATGGCA others(6): Show GTATGGCAAAGACT	G G	intron_variant intron_variant	MODIFIER	HG01123.hp1 HG01123.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0073 a0001c0001t0003g0073	1	214	0.0047	-13	c.317 others(34): Show c.3175-84554_3175-84542delTATGGCAAAGACT	PCDH7	ENSG00000169851.16	transcript	ENST00000695919.1	protein_coding	1/2			chr4	TogoVar
PCDH7_chr4_30715369_31151800	30894479	AAAAAAAA others(6): Show AAAAAAAAAAAAAT	A A	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG03139.hp1 HG01081.hp1 HG03139.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0041 a0001c0001t0042 a0001c0001t0041 a0001c0001t0042	a0001c0001t0041g0110 a0001c0001t0042g0117 a0001c0001t0041g0110 a0001c0001t0042g0117	2	214	0.0094	-13	c.317 others(34): Show c.3175-25672_3175-25660delAAAAAAAAAAATA	PCDH7	ENSG00000169851.16	transcript	ENST00000695919.1	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr4	TogoVar
PCDH7_chr4_30715369_31151800	30894481	AAAAAAAA others(6): Show AAAAAAAAAAATAT	A A	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02647.hp2 NA18522.hp1 others(1): Show HG02109.hp1 HG02647.hp2 NA18522.hp1 NA20129.hp2	a0001 a0001	a0001c0004 a0001c0016 a0001c0004 a0001c0016	a0001c0004t0001 a0001c0004t0007 a0001c0016t0032 a0001c0004t0001 a0001c0004t0007 a0001c0016t0032	a0001c0004t0001g0015 a0001c0004t0007g0016 a0001c0004t0007g0021 others(1): Show a0001c0004t0001g0015 a0001c0004t0007g0016 a0001c0004t0007g0021 a0001c0016t0032g0101	4	214	0.0187	-13	c.317 others(34): Show c.3175-25670_3175-25658delAAAAAAAAATATA	PCDH7	ENSG00000169851.16	transcript	ENST00000695919.1	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr4	TogoVar

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