Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
PSORS1C2_chr6_31132534_31144066	31133366	CCAGACAT others(6): Show CCAGACATAGGGAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00140.hp1 HG00558.hp1 HG00639.hp2 others(112): Show HG00140.hp1 HG00558.hp1 HG00639.hp2 HG00673.hp2 HG01074.hp1 HG01192.hp2 HG01243.hp1 HG01358.hp1 HG01361.hp2 HG01515.hp1 HG01884.hp1 HG01884.hp2 HG01891.hp1 HG01978.hp1 HG02015.hp2 HG02055.hp1 HG02056.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp2 HG02129.hp1 HG02145.hp2 HG02155.hp1 HG02280.hp2 HG02300.hp2 HG02451.hp2 HG02486.hp1 HG02486.hp2 HG02572.hp1 HG02572.hp2 HG02602.hp2 HG02615.hp2 HG02622.hp1 HG02622.hp2 HG02630.hp1 HG02647.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp1 HG02818.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp1 HG02922.hp2 HG02970.hp2 HG02976.hp2 HG03098.hp1 HG03098.hp2 HG03139.hp2 HG03195.hp1 HG03209.hp1 HG03209.hp2 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03540.hp1 HG03540.hp2 HG03579.hp2 HG03654.hp2 HG03704.hp1 HG03834.hp1 HG03834.hp2 HG04115.hp2 HG04184.hp2 HG04199.hp1 HG06807.hp1 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18906.hp2 NA18942.hp2 NA18948.hp2 NA18960.hp1 NA18965.hp2 NA18969.hp1 NA18979.hp2 NA18980.hp1 NA18982.hp1 NA18987.hp2 NA18989.hp1 NA18989.hp2 NA18999.hp1 NA19002.hp2 NA19005.hp2 NA19006.hp2 NA19007.hp2 NA19009.hp1 NA19010.hp1 NA19030.hp2 NA19056.hp1 NA19057.hp2 NA19063.hp2 NA19067.hp1 NA19072.hp2 NA19077.hp2 NA19078.hp1 NA19079.hp1 NA19080.hp1 NA19086.hp1 NA19240.hp1 NA20752.hp1 NA20905.hp1 NA21309.hp1 NA21309.hp2	a0001 a0002 a0003 others(6): Show a0001 a0002 a0003 a0004 a0005 a0006 a0007 a0008 a0011	a0001c0001 a0002c0002 a0003c0003 others(6): Show a0001c0001 a0002c0002 a0003c0003 a0004c0004 a0005c0005 a0006c0006 a0007c0007 a0008c0008 a0011c0009	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(12): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0008 a0002c0002t0005 a0003c0003t0001 a0004c0004t0002 a0005c0005t0001 a0006c0006t0004 a0006c0006t0009 a0007c0007t0004 a0007c0007t0009 a0008c0008t0003 a0011c0009t0001	a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0007 others(33): Show a0001c0001t0001g0001 a0001c0001t0001g0006 a0001c0001t0001g0007 a0001c0001t0001g0014 a0001c0001t0001g0025 a0001c0001t0001g0037 a0001c0001t0001g0076 a0001c0001t0002g0010 a0001c0001t0002g0023 a0001c0001t0002g0069 a0001c0001t0002g0086 a0001c0001t0003g0012 a0001c0001t0003g0020 a0001c0001t0003g0028 a0001c0001t0003g0035 a0001c0001t0003g0039 a0001c0001t0004g0002 a0001c0001t0004g0044 a0001c0001t0008g0034 a0001c0001t0008g0048 a0002c0002t0005g0013 a0003c0003t0001g0015 a0003c0003t0001g0049 a0004c0004t0002g0045 a0004c0004t0002g0082 a0005c0005t0001g0017 a0005c0005t0001g0079 a0006c0006t0004g0021 a0006c0006t0004g0047 a0006c0006t0009g0060 a0007c0007t0004g0061 a0007c0007t0004g0062 a0007c0007t0004g0084 a0007c0007t0009g0046 a0008c0008t0003g0027 a0011c0009t0001g0070	115	460	0.2500	-13	c.45 others(24): Show c.4572_*4584delTTCCCTATGTCTG	PSORS1C2	ENSG00000204538.4	transcript	ENST00000259845.5	protein_coding		4167		chr6	TogoVar
PSPC1_chr13_19697500_19787945	19730952	AAAAACAA others(6): Show AAAAACAAAAAAAC	A A	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG02723.hp2 HG03486.hp1 others(1): Show HG02647.hp2 HG02723.hp2 HG03486.hp1 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0006 a0001c0001t0001 a0001c0001t0002 a0001c0001t0006	a0001c0001t0001g0143 a0001c0001t0001g0145 a0001c0001t0002g0058 others(1): Show a0001c0001t0001g0143 a0001c0001t0001g0145 a0001c0001t0002g0058 a0001c0001t0006g0249	4	256	0.0156	-13	c.105 others(30): Show c.1053-621_1053-609delGTTTTTTTGTTTT	PSPC1	ENSG00000121390.19	transcript	ENST00000338910.9	protein_coding	5/8			chr13	TogoVar
PSPH_chr7_56006064_56056444	56027267	CAATGCTC others(6): Show CAATGCTCCTGAGA	C C	intron_variant intron_variant	MODIFIER	NA18968.hp1 NA18968.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0078 a0001c0001t0001g0078	1	390	0.0026	-13	c.-20 others(30): Show c.-20+4649_-20+4661delTCTCAGGAGCATT	PSPH	ENSG00000146733.14	transcript	ENST00000275605.8	protein_coding	3/7			chr7	TogoVar
PSPN_chr19_6370148_6380933	6372792	GCCCTCTC others(6): Show GCCCTCTCTCATGA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18950.hp1 NA18950.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0002 a0001c0002t0001g0002	1	378	0.0026	-13	c.24 others(24): Show c.2489_*2501delTCATGAGAGAGGG	PSPN	ENSG00000125650.5	transcript	ENST00000245810.2	protein_coding		2355		chr19	TogoVar
PSTPIP2_chr18_45978536_46077260	46009379	AAAAAAAA others(6): Show AAAAAAAAAAAAAC	A A	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG03041.hp2 NA19030.hp1 others(2): Show HG02280.hp2 HG03041.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0023 a0002c0002t0002g0109 a0002c0002t0002g0110 others(2): Show a0002c0002t0002g0023 a0002c0002t0002g0109 a0002c0002t0002g0110 a0002c0002t0002g0111 a0002c0002t0002g0140	5	314	0.0159	-13	c.354 others(30): Show c.354+1789_354+1801delGTTTTTTTTTTTT	PSTPIP2	ENSG00000152229.18	transcript	ENST00000409746.5	protein_coding	5/14			chr18	TogoVar
PSTPIP2_chr18_45978536_46077260	46059023	TTTTTCTT others(6): Show TTTTTCTTTTTTTC	T T	intron_variant intron_variant	MODIFIER	NA18953.hp2 NA18953.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0096 a0002c0002t0002g0096	1	314	0.0032	-13	c.33+ others(30): Show c.33+13120_33+13132delGAAAAAAAGAAAA	PSTPIP2	ENSG00000152229.18	transcript	ENST00000409746.5	protein_coding	1/14			chr18	TogoVar
PSTPIP2_chr18_45978536_46077260	46059029	TTTTTTTC others(6): Show TTTTTTTCTTTTTC	T T	intron_variant intron_variant	MODIFIER	HG01934.hp1 HG01952.hp2 HG02273.hp1 HG01934.hp1 HG01952.hp2 HG02273.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0002c0002t0002 a0001c0001t0001 a0002c0002t0002	a0001c0001t0001g0097 a0002c0002t0002g0074 a0002c0002t0002g0095 a0001c0001t0001g0097 a0002c0002t0002g0074 a0002c0002t0002g0095	3	314	0.0096	-13	c.33+ others(30): Show c.33+13114_33+13126delGAAAAAGAAAAAA	PSTPIP2	ENSG00000152229.18	transcript	ENST00000409746.5	protein_coding	1/14			chr18	TogoVar
PTBP2_chr1_96716784_96820049	96726074	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00280.hp2 HG00597.hp1 others(78): Show HG00099.hp2 HG00280.hp2 HG00597.hp1 HG00621.hp1 HG00621.hp2 HG00639.hp2 HG00642.hp1 HG01099.hp1 HG01109.hp2 HG01167.hp2 HG01168.hp2 HG01169.hp1 HG01175.hp2 HG01256.hp1 HG01257.hp1 HG01346.hp2 HG01358.hp1 HG01361.hp2 HG01952.hp2 HG02015.hp1 HG02083.hp2 HG02129.hp1 HG02155.hp1 HG02273.hp2 HG02615.hp2 HG02698.hp2 HG02970.hp2 HG02976.hp2 HG03239.hp2 HG03688.hp1 HG03710.hp1 HG03834.hp1 HG03942.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04204.hp2 NA18612.hp2 NA18939.hp2 NA18940.hp2 NA18942.hp2 NA18944.hp2 NA18947.hp2 NA18948.hp1 NA18949.hp2 NA18954.hp2 NA18960.hp2 NA18961.hp2 NA18962.hp1 NA18965.hp2 NA18966.hp2 NA18970.hp1 NA18972.hp1 NA18973.hp2 NA18979.hp2 NA18980.hp2 NA18981.hp2 NA18983.hp2 NA18986.hp2 NA18998.hp2 NA18999.hp1 NA19000.hp2 NA19002.hp2 NA19003.hp1 NA19004.hp2 NA19005.hp2 NA19007.hp2 NA19009.hp2 NA19010.hp1 NA19011.hp2 NA19054.hp2 NA19062.hp2 NA19063.hp2 NA19079.hp2 NA19083.hp2 NA19084.hp1 NA19086.hp2 NA19091.hp2 NA20129.hp1 NA20752.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0001c0001t0011 a0001c0001t0016 a0001c0001t0017 a0001c0001t0018 a0001c0002t0001	a0001c0001t0001g0159 a0001c0001t0001g0223 a0001c0001t0002g0018 others(78): Show a0001c0001t0001g0159 a0001c0001t0001g0223 a0001c0001t0002g0018 a0001c0001t0002g0155 a0001c0001t0002g0156 a0001c0001t0002g0157 a0001c0001t0002g0158 a0001c0001t0002g0160 a0001c0001t0002g0161 a0001c0001t0002g0164 a0001c0001t0002g0165 a0001c0001t0002g0166 a0001c0001t0002g0167 a0001c0001t0002g0168 a0001c0001t0002g0169 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0176 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0179 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0182 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0188 a0001c0001t0002g0189 a0001c0001t0002g0190 a0001c0001t0002g0191 a0001c0001t0002g0192 a0001c0001t0002g0193 a0001c0001t0002g0194 a0001c0001t0002g0195 a0001c0001t0002g0196 a0001c0001t0002g0197 a0001c0001t0002g0198 a0001c0001t0002g0199 a0001c0001t0002g0200 a0001c0001t0002g0201 a0001c0001t0002g0204 a0001c0001t0002g0205 a0001c0001t0002g0207 a0001c0001t0002g0209 a0001c0001t0002g0210 a0001c0001t0002g0211 a0001c0001t0002g0212 a0001c0001t0002g0214 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0219 a0001c0001t0002g0222 a0001c0001t0002g0226 a0001c0001t0002g0228 a0001c0001t0002g0229 a0001c0001t0002g0231 a0001c0001t0002g0233 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0241 a0001c0001t0002g0242 a0001c0001t0002g0244 a0001c0001t0002g0247 a0001c0001t0002g0360 a0001c0001t0002g0361 a0001c0001t0003g0147 a0001c0001t0007g0154 a0001c0001t0008g0162 a0001c0001t0010g0151 a0001c0001t0010g0202 a0001c0001t0010g0203 a0001c0001t0011g0187 a0001c0001t0016g0152 a0001c0001t0017g0225 a0001c0001t0018g0230 a0001c0002t0001g0312	81	107	0.7570	-13	c.39+ others(28): Show c.39+2505_39+2517delAAAAAAAAAAAAA	PTBP2	ENSG00000117569.20	transcript	ENST00000674951.1	protein_coding	2/13		INFO_REALIGN_3_PRIME	chr1	TogoVar
PTBP3_chr9_112213435_112338619	112331114	CACACACA others(6): Show CACACACACACACG	C C	intron_variant intron_variant	MODIFIER	HG01346.hp2 HG01346.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0331 a0001c0001t0001g0331	1	340	0.0029	-13	c.-52 others(30): Show c.-52+2343_-52+2355delCGTGTGTGTGTGT	PTBP3	ENSG00000119314.16	transcript	ENST00000374257.6	protein_coding	1/13			chr9	TogoVar
PTCH2_chr1_44816938_44848253	44842274	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA18968.hp2 NA18986.hp2 NA18968.hp2 NA18986.hp2	a0001 a0002 a0001 a0002	a0001c0003 a0002c0004 a0001c0003 a0002c0004	a0001c0003t0001 a0002c0004t0001 a0001c0003t0001 a0002c0004t0001	a0001c0003t0001g0223 a0002c0004t0001g0006 a0001c0003t0001g0223 a0002c0004t0001g0006	2	154	0.0130	-13	c.73- others(26): Show c.73-248_73-236delAAAAAAAAAAAAA	PTCH2	ENSG00000117425.14	transcript	ENST00000372192.4	protein_coding	1/21			chr1	TogoVar
PTCHD1_chrX_23329849_23409374	23348108	TAGGATGA others(6): Show TAGGATGAATCAAA	T T	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00733.hp1 HG01257.hp1 others(12): Show HG00280.hp1 HG00733.hp1 HG01257.hp1 HG01258.hp1 HG01891.hp1 HG02602.hp1 HG02630.hp2 HG03195.hp2 HG03471.hp1 HG03654.hp1 HG03704.hp1 HG03927.hp2 NA18522.hp1 NA19065.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0003 a0001c0001t0010 others(11): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0010 a0001c0001t0018 a0001c0001t0101 a0001c0001t0124 a0001c0001t0126 a0001c0001t0143 a0001c0002t0009 a0001c0002t0021 a0001c0002t0033 a0001c0002t0036 a0001c0002t0037 a0001c0002t0155	a0001c0001t0002g0283 a0001c0001t0003g0264 a0001c0001t0010g0285 others(11): Show a0001c0001t0002g0283 a0001c0001t0003g0264 a0001c0001t0010g0285 a0001c0001t0018g0114 a0001c0001t0101g0269 a0001c0001t0124g0263 a0001c0001t0126g0112 a0001c0001t0143g0277 a0001c0002t0009g0009 a0001c0002t0021g0282 a0001c0002t0033g0279 a0001c0002t0036g0194 a0001c0002t0037g0280 a0001c0002t0155g0281	15	295	0.0508	-13	c.351 others(32): Show c.351+12887_351+12899delTGAATCAAAAGGA	PTCHD1	ENSG00000165186.12	transcript	ENST00000379361.5	protein_coding	1/2		INFO_REALIGN_3_PRIME	chrX	TogoVar
PTCHD1_chrX_23329849_23409374	23405666	TAACACAC others(6): Show TAACACACACACAC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19077.hp2 NA19077.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0030 a0001c0002t0030	a0001c0002t0030g0053 a0001c0002t0030g0053	1	295	0.0034	-13	c.11 others(26): Show c.11482_*11494delAACACACACACAC	PTCHD1	ENSG00000165186.12	transcript	ENST00000379361.5	protein_coding		1293		chrX	TogoVar
PTCHD1_chrX_23329849_23409374	23405693	CACACACA others(6): Show CACACACACACACA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19076.hp1 NA19076.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0060 a0001c0001t0060	a0001c0001t0060g0147 a0001c0001t0060g0147	1	295	0.0034	-13	c.11 others(26): Show c.11509_*11521delACACACACACACA	PTCHD1	ENSG00000165186.12	transcript	ENST00000379361.5	protein_coding		1320		chrX	TogoVar
PTEN_chr10_87858625_87976930	87966902	GTTTTTTT others(6): Show GTTTTTTTTTTTTT	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00609.hp2 HG02074.hp2 NA18972.hp2 HG00609.hp2 HG02074.hp2 NA18972.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0202 a0001c0001t0007g0265 a0001c0001t0007g0278 a0001c0001t0007g0202 a0001c0001t0007g0265 a0001c0001t0007g0278	3	56	0.0536	-13	c.14 others(24): Show c.1447_*1459delTTTTTTTTTTTTT	PTEN	ENSG00000171862.15	transcript	ENST00000371953.8	protein_coding	9/9	1447	INFO_REALIGN_3_PRIME	chr10	TogoVar
PTER_chr10_16432010_16518745	16463198	TAAAAAAA others(6): Show TAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0144 a0001c0003t0002g0144	1	284	0.0035	-13	c.-48 others(32): Show c.-48-21127_-48-21115delAAAAAAAAAAAAA	PTER	ENSG00000165983.15	transcript	ENST00000535784.7	protein_coding	1/4		INFO_REALIGN_3_PRIME	chr10	TogoVar
PTGER1_chr19_14467466_14480354	14467700	AGTGGCCT others(6): Show AGTGGCCTCTCTCC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19087.hp2 NA19087.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0005 a0001c0001t0001g0005	1	406	0.0025	-13	c.48 others(24): Show c.4847_*4859delGGAGAGAGGCCAC	PTGER1	ENSG00000160951.4	transcript	ENST00000292513.4	protein_coding		4765		chr19	TogoVar
PTGER1_chr19_14467466_14480354	14471012	GACACCCC others(6): Show GACACCCCCATTTC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18955.hp2 NA18955.hp2	a0007 a0007	a0007c0008 a0007c0008	a0007c0008t0001 a0007c0008t0001	a0007c0008t0001g0034 a0007c0008t0001g0034	1	406	0.0025	-13	c.15 others(24): Show c.1535_*1547delGAAATGGGGGTGT	PTGER1	ENSG00000160951.4	transcript	ENST00000292513.4	protein_coding		1453		chr19	TogoVar
PTGER4_chr5_40674915_40698735	40676753	AATTGTCA others(6): Show AATTGTCAGAGCAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19072.hp2 NA19072.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0003 a0001c0001t0001g0003	1	404	0.0025	-13	c.-37 others(24): Show c.-3768_-3756delATTGTCAGAGCAG	PTGER4	ENSG00000171522.6	transcript	ENST00000302472.4	protein_coding		3161		chr5	TogoVar
PTGER4_chr5_40674915_40698735	40697234	GAAAGAAA others(6): Show GAAAGAAAGAAAGA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01175.hp2 HG01175.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0001 a0002c0003t0001	a0002c0003t0001g0001 a0002c0003t0001g0001	1	262	0.0038	-13	c.48 others(24): Show c.4857_*4869delAAAGAAAGAAAGA	PTGER4	ENSG00000171522.6	transcript	ENST00000302472.4	protein_coding		3500		chr5	TogoVar
PTGES2_chr9_128115693_128132729	128119012	AGGGGTAC others(6): Show AGGGGTACAGGGAT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00140.hp1 others(227): Show HG00099.hp1 HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00408.hp1 HG00408.hp2 HG00544.hp1 HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00621.hp1 HG00621.hp2 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp2 HG00741.hp1 HG00741.hp2 HG01069.hp2 HG01070.hp1 HG01070.hp2 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp2 HG01106.hp1 HG01106.hp2 HG01167.hp1 HG01167.hp2 HG01168.hp1 HG01168.hp2 HG01169.hp1 HG01169.hp2 HG01175.hp1 HG01175.hp2 HG01192.hp1 HG01192.hp2 HG01243.hp1 HG01243.hp2 HG01255.hp2 HG01257.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp1 HG01346.hp2 HG01358.hp1 HG01358.hp2 HG01515.hp1 HG01517.hp2 HG01891.hp2 HG01934.hp1 HG01934.hp2 HG01943.hp1 HG01943.hp2 HG01952.hp1 HG01975.hp1 HG01975.hp2 HG01978.hp1 HG01978.hp2 HG01981.hp1 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02027.hp2 HG02040.hp1 HG02055.hp1 HG02055.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02109.hp1 HG02145.hp1 HG02145.hp2 HG02148.hp1 HG02155.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp1 HG02257.hp2 HG02258.hp2 HG02273.hp1 HG02293.hp2 HG02451.hp2 HG02559.hp1 HG02572.hp1 HG02572.hp2 HG02602.hp1 HG02602.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp2 HG02630.hp2 HG02647.hp1 HG02683.hp1 HG02683.hp2 HG02698.hp1 HG02735.hp1 HG02735.hp2 HG02809.hp2 HG02818.hp1 HG02895.hp1 HG02922.hp1 HG02970.hp1 HG03041.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp2 HG03239.hp1 HG03239.hp2 HG03453.hp2 HG03491.hp1 HG03491.hp2 HG03492.hp1 HG03492.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp2 HG03654.hp1 HG03654.hp2 HG03669.hp2 HG03688.hp1 HG03688.hp2 HG03710.hp1 HG03831.hp1 HG03831.hp2 HG03834.hp1 HG03834.hp2 HG03927.hp1 HG03927.hp2 HG03942.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp1 HG04184.hp2 HG04204.hp1 HG04204.hp2 HG04228.hp1 HG06807.hp2 NA18612.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18906.hp2 NA18941.hp2 NA18943.hp1 NA18944.hp1 NA18945.hp1 NA18946.hp1 NA18947.hp2 NA18948.hp1 NA18948.hp2 NA18952.hp1 NA18957.hp1 NA18957.hp2 NA18960.hp1 NA18960.hp2 NA18961.hp2 NA18962.hp1 NA18962.hp2 NA18963.hp2 NA18964.hp1 NA18964.hp2 NA18965.hp1 NA18965.hp2 NA18966.hp1 NA18966.hp2 NA18968.hp1 NA18968.hp2 NA18971.hp2 NA18977.hp1 NA18978.hp2 NA18980.hp1 NA18980.hp2 NA18981.hp1 NA18982.hp1 NA18982.hp2 NA18983.hp1 NA18984.hp1 NA18985.hp2 NA18990.hp1 NA18992.hp2 NA18993.hp1 NA18993.hp2 NA18995.hp1 NA18997.hp1 NA19000.hp1 NA19001.hp2 NA19005.hp1 NA19005.hp2 NA19007.hp2 NA19009.hp1 NA19009.hp2 NA19010.hp1 NA19030.hp1 NA19060.hp1 NA19064.hp1 NA19067.hp1 NA19068.hp1 NA19074.hp1 NA19078.hp1 NA19080.hp1 NA19080.hp2 NA19081.hp1 NA19081.hp2 NA19082.hp1 NA19083.hp1 NA19083.hp2 NA19084.hp1 NA19084.hp2 NA19085.hp2 NA19086.hp2 NA19087.hp1 NA19090.hp2 NA19240.hp2 NA20129.hp2 NA20300.hp1 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20805.hp2 NA20905.hp1 NA20905.hp2 NA21309.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0003 a0001c0006 others(2): Show a0001c0001 a0001c0003 a0001c0006 a0002c0002 a0004c0005	a0001c0001t0001 a0001c0003t0001 a0001c0006t0001 others(3): Show a0001c0001t0001 a0001c0003t0001 a0001c0006t0001 a0001c0006t0003 a0002c0002t0001 a0004c0005t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0007 others(39): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0007 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0019 a0001c0001t0001g0023 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0001g0038 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0068 a0001c0001t0001g0071 a0001c0003t0001g0024 a0001c0006t0001g0048 a0001c0006t0003g0049 a0002c0002t0001g0005 a0002c0002t0001g0061 a0004c0005t0001g0022	230	364	0.6319	-13	c.21 others(24): Show c.2120_*2132delATCCCTGTACCCC	PTGES2	ENSG00000148334.16	transcript	ENST00000338961.11	protein_coding		1680		chr9	TogoVar
PTGFRN_chr1_116904916_116995353	116983498	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG02559.hp2 HG00099.hp2 HG02559.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0145 a0001c0001t0001g0150 a0001c0001t0001g0145 a0001c0001t0001g0150	2	129	0.0155	-13	c.216 others(32): Show c.2168-1170_2168-1158delAAAAAAAAAAAAA	PTGFRN	ENSG00000134247.10	transcript	ENST00000393203.3	protein_coding	7/8		INFO_REALIGN_3_PRIME	chr1	TogoVar
PTGIR_chr19_46615468_46630089	46619570	AGAGAGAG others(6): Show AGAGAGAGAGAGAG	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0004 a0004	a0004c0007 a0004c0007	a0004c0007t0005 a0004c0007t0005	a0004c0007t0005g0031 a0004c0007t0005g0031	1	416	0.0024	-13	c.16 others(24): Show c.1697_*1709delCTCTCTCTCTCTC	PTGIR	ENSG00000160013.9	transcript	ENST00000291294.7	protein_coding		897		chr19	TogoVar
PTGIS_chr20_49498874_49573137	49538256	GAAAAAAA others(6): Show GAAAAAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00438.hp1 HG01243.hp2 others(8): Show HG00408.hp2 HG00438.hp1 HG01243.hp2 HG02080.hp2 HG02109.hp1 HG02572.hp1 HG03041.hp1 HG03471.hp1 NA18522.hp2 NA19002.hp2 NA20300.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0011 a0001c0001t0015 others(6): Show a0001c0001t0001 a0001c0001t0011 a0001c0001t0015 a0001c0001t0027 a0001c0001t0051 a0001c0001t0059 a0001c0002t0002 a0001c0002t0005 a0001c0002t0025	a0001c0001t0001g0298 a0001c0001t0001g0299 a0001c0001t0011g0065 others(7): Show a0001c0001t0001g0298 a0001c0001t0001g0299 a0001c0001t0011g0065 a0001c0001t0015g0021 a0001c0001t0027g0004 a0001c0001t0051g0040 a0001c0001t0059g0117 a0001c0002t0002g0262 a0001c0002t0005g0067 a0001c0002t0025g0055	11	213	0.0516	-13	c.673 others(30): Show c.673+1301_673+1313delTTTTTTTTTTTTT	PTGIS	ENSG00000124212.6	transcript	ENST00000244043.5	protein_coding	5/9			chr20	TogoVar
PTGR2_chr14_73846831_73890726	73883188	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp1 HG00140.hp2 others(64): Show HG00099.hp1 HG00140.hp1 HG00140.hp2 HG00280.hp2 HG00558.hp1 HG00639.hp1 HG00642.hp1 HG00738.hp1 HG01109.hp2 HG01255.hp1 HG01257.hp2 HG01258.hp2 HG01261.hp1 HG01358.hp1 HG01433.hp2 HG01516.hp2 HG01517.hp1 HG01884.hp1 HG01934.hp1 HG01952.hp1 HG01952.hp2 HG01975.hp2 HG01978.hp1 HG02055.hp1 HG02132.hp2 HG02148.hp1 HG02257.hp1 HG02257.hp2 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02451.hp1 HG02486.hp1 HG02683.hp2 HG02723.hp2 HG02886.hp1 HG02895.hp2 HG02897.hp2 HG02970.hp1 HG03017.hp2 HG03239.hp2 HG03490.hp2 HG03492.hp2 HG03669.hp2 HG03704.hp2 HG03834.hp1 HG03927.hp2 HG04199.hp1 NA18947.hp2 NA18952.hp2 NA18962.hp1 NA18972.hp2 NA18984.hp2 NA19004.hp1 NA19007.hp1 NA19056.hp1 NA19072.hp1 NA19074.hp1 NA19079.hp1 NA19083.hp1 NA19084.hp2 NA19085.hp2 NA19240.hp1 NA20129.hp1 NA20129.hp2 NA20300.hp2 NA20805.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0003 a0001c0002t0007 a0001c0001t0003 a0001c0002t0007	a0001c0001t0003g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 others(48): Show a0001c0001t0003g0003 a0001c0001t0003g0005 a0001c0001t0003g0006 a0001c0001t0003g0009 a0001c0001t0003g0021 a0001c0001t0003g0022 a0001c0001t0003g0042 a0001c0001t0003g0087 a0001c0001t0003g0088 a0001c0001t0003g0089 a0001c0001t0003g0090 a0001c0001t0003g0091 a0001c0001t0003g0092 a0001c0001t0003g0101 a0001c0001t0003g0102 a0001c0001t0003g0103 a0001c0001t0003g0104 a0001c0001t0003g0105 a0001c0001t0003g0106 a0001c0001t0003g0107 a0001c0001t0003g0108 a0001c0001t0003g0109 a0001c0001t0003g0110 a0001c0001t0003g0111 a0001c0001t0003g0112 a0001c0001t0003g0113 a0001c0001t0003g0114 a0001c0001t0003g0115 a0001c0001t0003g0116 a0001c0001t0003g0118 a0001c0001t0003g0119 a0001c0001t0003g0120 a0001c0001t0003g0121 a0001c0001t0003g0122 a0001c0001t0003g0123 a0001c0001t0003g0124 a0001c0001t0003g0125 a0001c0001t0003g0126 a0001c0001t0003g0127 a0001c0001t0003g0128 a0001c0001t0003g0129 a0001c0001t0003g0130 a0001c0001t0003g0131 a0001c0001t0003g0132 a0001c0001t0003g0133 a0001c0001t0003g0134 a0001c0001t0003g0135 a0001c0001t0003g0136 a0001c0001t0003g0139 a0001c0002t0007g0174 a0001c0002t0007g0175	67	87	0.7701	-13	c.979 others(28): Show c.979+770_979+782delTTTTTTTTTTTTT	PTGR2	ENSG00000140043.12	transcript	ENST00000555661.6	protein_coding	9/9		INFO_REALIGN_3_PRIME	chr14	TogoVar
PTGR3_chr18_75190113_75214139	75193978	TGTGTGTG others(6): Show TGTGTGTGTGTCTC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00741.hp1 HG00741.hp2 HG01109.hp1 others(6): Show HG00741.hp1 HG00741.hp2 HG01109.hp1 HG01261.hp2 HG01496.hp1 HG02280.hp1 HG02965.hp1 HG03453.hp1 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0014 a0001c0001 a0001c0014	a0001c0001t0015 a0001c0001t0022 a0001c0001t0033 others(1): Show a0001c0001t0015 a0001c0001t0022 a0001c0001t0033 a0001c0014t0015	a0001c0001t0015g0040 a0001c0001t0015g0063 a0001c0001t0022g0041 others(3): Show a0001c0001t0015g0040 a0001c0001t0015g0063 a0001c0001t0022g0041 a0001c0001t0022g0107 a0001c0001t0033g0039 a0001c0014t0015g0157	9	432	0.0208	-13	c.74 others(24): Show c.7425_*7437delGAGACACACACAC	PTGR3	ENSG00000180011.7	transcript	ENST00000322342.4	protein_coding		1134		chr18	TogoVar
PTK2B_chr8_27320552_27464386	27350991	ATATATAT others(6): Show ATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG01106.hp1 HG01257.hp1 others(7): Show HG00323.hp2 HG01106.hp1 HG01257.hp1 HG01346.hp1 HG01515.hp1 HG02074.hp2 HG02165.hp1 HG02280.hp2 HG03490.hp2 HG03704.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0001c0001 a0002c0003	a0001c0001t0003 a0002c0003t0002 a0001c0001t0003 a0002c0003t0002	a0001c0001t0003g0097 a0001c0001t0003g0098 a0002c0003t0002g0056 others(7): Show a0001c0001t0003g0097 a0001c0001t0003g0098 a0002c0003t0002g0056 a0002c0003t0002g0057 a0002c0003t0002g0066 a0002c0003t0002g0260 a0002c0003t0002g0271 a0002c0003t0002g0274 a0002c0003t0002g0287 a0002c0003t0002g0295	10	237	0.0422	-13	c.-38 others(32): Show c.-38+25311_-38+25323delTATATATATATAT	PTK2B	ENSG00000120899.18	transcript	ENST00000346049.10	protein_coding	1/30			chr8	TogoVar
PTK2B_chr8_27320552_27464386	27362212	GCAGCACC others(6): Show GCAGCACCAGGAGC	G G	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG03579.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0062 a0001c0001t0003g0062	1	326	0.0031	-13	c.-37 others(32): Show c.-37-35334_-37-35322delAGCACCAGGAGCC	PTK2B	ENSG00000120899.18	transcript	ENST00000346049.10	protein_coding	1/30		INFO_REALIGN_3_PRIME	chr8	TogoVar
PTK2_chr8_140652900_141006282	140670491	ACACACAC others(6): Show ACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	NA18964.hp2 NA19003.hp2 NA18964.hp2 NA19003.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0123 a0002c0002t0001g0217 a0002c0002t0001g0123 a0002c0002t0001g0217	2	249	0.0080	-13	c.283 others(30): Show c.2833-769_2833-757delGTGTGTGTGTGTG	PTK2	ENSG00000169398.20	transcript	ENST00000696786.1	protein_coding	32/35			chr8	TogoVar
PTK2_chr8_140652900_141006282	140679003	GTTTTTTT others(6): Show GTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG01361.hp2 HG01496.hp1 others(4): Show HG01243.hp1 HG01361.hp2 HG01496.hp1 HG02083.hp1 NA18906.hp1 NA19004.hp1 NA19079.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0001c0001t0004 a0002c0002t0001 a0001c0001t0002 a0001c0001t0004 a0002c0002t0001	a0001c0001t0002g0035 a0001c0001t0002g0068 a0001c0001t0002g0074 others(4): Show a0001c0001t0002g0035 a0001c0001t0002g0068 a0001c0001t0002g0074 a0001c0001t0004g0116 a0002c0002t0001g0167 a0002c0002t0001g0197 a0002c0002t0001g0268	7	28	0.2500	-13	c.268 others(32): Show c.2686-3517_2686-3505delAAAAAAAAAAAAA	PTK2	ENSG00000169398.20	transcript	ENST00000696786.1	protein_coding	30/35			chr8	TogoVar
PTK2_chr8_140652900_141006282	140693564	TAAAAAAA others(6): Show TAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG01070.hp1 HG01515.hp1 others(3): Show HG00140.hp1 HG01070.hp1 HG01515.hp1 HG02155.hp2 HG02451.hp2 NA18612.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0002c0002t0002 a0001c0001t0002 a0002c0002t0002	a0001c0001t0002g0041 a0001c0001t0002g0052 a0001c0001t0002g0054 others(3): Show a0001c0001t0002g0041 a0001c0001t0002g0052 a0001c0001t0002g0054 a0001c0001t0002g0067 a0001c0001t0002g0076 a0002c0002t0002g0195	6	35	0.1714	-13	c.262 others(32): Show c.2623-6883_2623-6871delTTTTTTTTTTTTT	PTK2	ENSG00000169398.20	transcript	ENST00000696786.1	protein_coding	29/35			chr8	TogoVar
PTK2_chr8_140652900_141006282	140697852	GTTTTTTT others(6): Show GTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	NA18961.hp2 NA19070.hp1 NA18961.hp2 NA19070.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0272 a0001c0001t0002g0274 a0001c0001t0002g0272 a0001c0001t0002g0274	2	32	0.0625	-13	c.262 others(32): Show c.2622+3026_2622+3038delAAAAAAAAAAAAA	PTK2	ENSG00000169398.20	transcript	ENST00000696786.1	protein_coding	29/35			chr8	TogoVar
PTK2_chr8_140652900_141006282	140748384	TCAGGAGG others(6): Show TCAGGAGGCTGAGG	T T	intron_variant intron_variant	MODIFIER	HG03654.hp1 HG03654.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0128 a0002c0002t0001g0128	1	288	0.0035	-13	c.154 others(32): Show c.1541-1537_1541-1525delCCTCAGCCTCCTG	PTK2	ENSG00000169398.20	transcript	ENST00000696786.1	protein_coding	20/35			chr8	TogoVar
PTK2_chr8_140652900_141006282	140820106	TTTTTTTT others(6): Show TTTTTTTTTTTTTA	T T	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG02015.hp1 HG02895.hp1 others(17): Show HG01255.hp1 HG02015.hp1 HG02895.hp1 HG02896.hp1 HG02897.hp1 HG03209.hp2 HG03710.hp2 NA18906.hp1 NA18944.hp2 NA18947.hp1 NA18960.hp2 NA18969.hp2 NA18975.hp1 NA18984.hp2 NA19003.hp1 NA19004.hp2 NA19010.hp2 NA19030.hp2 NA19063.hp2 NA19240.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0009 others(1): Show a0001c0001 a0001c0003 a0001c0009 a0002c0002	a0001c0001t0001 a0001c0001t0004 a0001c0003t0001 others(4): Show a0001c0001t0001 a0001c0001t0004 a0001c0003t0001 a0001c0003t0002 a0001c0003t0005 a0001c0009t0001 a0002c0002t0001	a0001c0001t0001g0094 a0001c0001t0001g0265 a0001c0001t0004g0116 others(17): Show a0001c0001t0001g0094 a0001c0001t0001g0265 a0001c0001t0004g0116 a0001c0003t0001g0096 a0001c0003t0001g0122 a0001c0003t0001g0162 a0001c0003t0001g0163 a0001c0003t0001g0213 a0001c0003t0001g0232 a0001c0003t0001g0233 a0001c0003t0001g0236 a0001c0003t0002g0237 a0001c0003t0002g0244 a0001c0003t0002g0255 a0001c0003t0002g0256 a0001c0003t0005g0118 a0001c0003t0005g0119 a0001c0003t0005g0120 a0001c0009t0001g0214 a0002c0002t0001g0281	20	288	0.0694	-13	c.649 others(30): Show c.649-1099_649-1087delTAAAAAAAAAAAA	PTK2	ENSG00000169398.20	transcript	ENST00000696786.1	protein_coding	8/35			chr8	TogoVar
PTK2_chr8_140652900_141006282	140964547	ATTTTTTT others(6): Show ATTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01099.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0248 a0001c0001t0001g0248	1	129	0.0078	-13	c.-12 others(34): Show c.-122+36565_-122+36577delAAAAAAAAAAAAA	PTK2	ENSG00000169398.20	transcript	ENST00000696786.1	protein_coding	1/35			chr8	TogoVar
PTK2_chr8_140652900_141006282	141004647	AAAATTAG others(6): Show AAAATTAGCCGGGT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01261.hp2 HG01261.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0021 a0001c0001t0001g0021	1	288	0.0035	-13	c.-36 others(24): Show c.-3657_-3645delACCCGGCTAATTT	PTK2	ENSG00000169398.20	transcript	ENST00000696786.1	protein_coding		3366		chr8	TogoVar
PTK2_chr8_140652900_141006282	141005868	GTTTTTTG others(6): Show GTTTTTTGTTTTTT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03098.hp1 HG03098.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0051 a0001c0001t0002g0051	1	288	0.0035	-13	c.-48 others(24): Show c.-4878_-4866delAAAAAACAAAAAA	PTK2	ENSG00000169398.20	transcript	ENST00000696786.1	protein_coding		4587		chr8	TogoVar
PTK7_chr6_43071314_43166715	43157345	TATATATA others(6): Show TATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG03209.hp1 HG03209.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0236 a0001c0002t0004g0236	1	257	0.0039	-13	c.272 others(32): Show c.2722-1471_2722-1459delATATATATATATA	PTK7	ENSG00000112655.16	transcript	ENST00000230419.9	protein_coding	17/19			chr6	TogoVar
PTK7_chr6_43071314_43166715	43157347	TATATATA others(6): Show TATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG02809.hp1 NA19030.hp2 HG02809.hp1 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0233 a0001c0001t0004g0269 a0001c0001t0004g0233 a0001c0001t0004g0269	2	269	0.0074	-13	c.272 others(32): Show c.2722-1469_2722-1457delATATATATATATA	PTK7	ENSG00000112655.16	transcript	ENST00000230419.9	protein_coding	17/19			chr6	TogoVar
PTK7_chr6_43071314_43166715	43157349	TATATATA others(6): Show TATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG03098.hp1 HG03139.hp2 HG03098.hp1 HG03139.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0203 a0001c0001t0001g0208 a0001c0001t0001g0203 a0001c0001t0001g0208	2	253	0.0079	-13	c.272 others(32): Show c.2722-1467_2722-1455delATATATATATATA	PTK7	ENSG00000112655.16	transcript	ENST00000230419.9	protein_coding	17/19			chr6	TogoVar
PTN_chr7_137222341_137348733	137277900	TGAGATGA others(6): Show TGAGATGATAGATA	T T	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00099.hp2 HG00323.hp1 others(131): Show HG00099.hp1 HG00099.hp2 HG00323.hp1 HG00408.hp2 HG00438.hp1 HG00597.hp1 HG00621.hp1 HG00639.hp1 HG00639.hp2 HG00642.hp1 HG00642.hp2 HG00733.hp2 HG00738.hp1 HG01070.hp2 HG01169.hp2 HG01255.hp1 HG01256.hp1 HG01258.hp1 HG01261.hp1 HG01433.hp1 HG01891.hp1 HG01943.hp2 HG01978.hp1 HG02027.hp1 HG02055.hp1 HG02074.hp2 HG02109.hp2 HG02129.hp1 HG02145.hp2 HG02155.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02523.hp1 HG02523.hp2 HG02559.hp1 HG02572.hp1 HG02572.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp1 HG02647.hp1 HG02683.hp2 HG02698.hp2 HG02717.hp2 HG02723.hp2 HG02735.hp2 HG02809.hp1 HG02818.hp1 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG02922.hp2 HG02970.hp2 HG02976.hp2 HG03017.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03139.hp1 HG03195.hp1 HG03209.hp2 HG03225.hp2 HG03239.hp2 HG03453.hp2 HG03486.hp1 HG03486.hp2 HG03490.hp2 HG03491.hp1 HG03491.hp2 HG03516.hp1 HG03516.hp2 HG03688.hp2 HG03704.hp2 HG03710.hp1 HG03710.hp2 HG04115.hp1 HG04115.hp2 HG04184.hp2 HG04199.hp1 HG04199.hp2 HG04204.hp2 HG04228.hp1 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18612.hp1 NA18612.hp2 NA18906.hp1 NA18906.hp2 NA18944.hp1 NA18945.hp1 NA18946.hp2 NA18951.hp1 NA18954.hp1 NA18955.hp1 NA18955.hp2 NA18957.hp2 NA18964.hp1 NA18964.hp2 NA18967.hp2 NA18975.hp1 NA18978.hp2 NA18982.hp1 NA18982.hp2 NA18983.hp2 NA18986.hp1 NA18988.hp1 NA18990.hp2 NA18994.hp1 NA18994.hp2 NA19003.hp2 NA19007.hp2 NA19009.hp1 NA19011.hp1 NA19030.hp2 NA19043.hp1 NA19043.hp2 NA19056.hp2 NA19058.hp1 NA19060.hp1 NA19080.hp1 NA19082.hp1 NA19082.hp2 NA19087.hp2 NA19089.hp1 NA19089.hp2 NA20300.hp1 NA20300.hp2 NA20752.hp1 NA20805.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0001 a0001c0001t0002 a0001c0001t0003	a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0008 others(130): Show a0001c0001t0001g0002 a0001c0001t0001g0006 a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0013 a0001c0001t0001g0021 a0001c0001t0001g0023 a0001c0001t0001g0026 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0032 a0001c0001t0001g0033 a0001c0001t0001g0036 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0049 a0001c0001t0001g0050 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0063 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0069 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0085 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0091 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0100 a0001c0001t0001g0106 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0124 a0001c0001t0001g0132 a0001c0001t0001g0135 a0001c0001t0001g0137 a0001c0001t0001g0139 a0001c0001t0001g0141 a0001c0001t0001g0146 a0001c0001t0001g0151 a0001c0001t0001g0152 a0001c0001t0001g0155 a0001c0001t0001g0158 a0001c0001t0001g0160 a0001c0001t0001g0162 a0001c0001t0001g0166 a0001c0001t0001g0172 a0001c0001t0001g0173 a0001c0001t0001g0176 a0001c0001t0001g0179 a0001c0001t0001g0181 a0001c0001t0001g0186 a0001c0001t0001g0189 a0001c0001t0001g0192 a0001c0001t0001g0194 a0001c0001t0001g0196 a0001c0001t0001g0198 a0001c0001t0001g0199 a0001c0001t0001g0201 a0001c0001t0001g0202 a0001c0001t0001g0203 a0001c0001t0001g0206 a0001c0001t0001g0208 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0214 a0001c0001t0001g0215 a0001c0001t0001g0218 a0001c0001t0001g0219 a0001c0001t0001g0221 a0001c0001t0001g0225 a0001c0001t0001g0227 a0001c0001t0001g0229 a0001c0001t0001g0230 a0001c0001t0001g0232 a0001c0001t0001g0239 a0001c0001t0001g0243 a0001c0001t0001g0244 a0001c0001t0001g0252 a0001c0001t0001g0253 a0001c0001t0001g0256 a0001c0001t0001g0258 a0001c0001t0001g0263 a0001c0001t0001g0264 a0001c0001t0001g0266 a0001c0001t0001g0268 a0001c0001t0001g0273 a0001c0001t0001g0275 a0001c0001t0001g0282 a0001c0001t0001g0286 a0001c0001t0001g0289 a0001c0001t0001g0293 a0001c0001t0002g0005 a0001c0001t0002g0010 a0001c0001t0002g0024 a0001c0001t0002g0043 a0001c0001t0002g0071 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0090 a0001c0001t0002g0095 a0001c0001t0002g0096 a0001c0001t0002g0097 a0001c0001t0002g0122 a0001c0001t0002g0136 a0001c0001t0002g0143 a0001c0001t0002g0144 a0001c0001t0002g0148 a0001c0001t0002g0149 a0001c0001t0002g0150 a0001c0001t0002g0163 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0191 a0001c0001t0002g0242 a0001c0001t0002g0267 a0001c0001t0003g0080	134	153	0.8758	-13	c.-1- others(30): Show c.-1-22939_-1-22927delTATCTATCATCTC	PTN	ENSG00000105894.13	transcript	ENST00000348225.7	protein_coding	1/4			chr7	TogoVar
PTN_chr7_137222341_137348733	137278306	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02647.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0050 a0001c0001t0001g0050	1	13	0.0769	-13	c.-1- others(30): Show c.-1-23345_-1-23333delTTTTTTTTTTTTT	PTN	ENSG00000105894.13	transcript	ENST00000348225.7	protein_coding	1/4			chr7	TogoVar
PTN_chr7_137222341_137348733	137283952	ATTTTTTT others(6): Show ATTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00544.hp1 HG01433.hp1 HG02074.hp1 others(3): Show HG00544.hp1 HG01433.hp1 HG02074.hp1 HG02717.hp2 HG03516.hp2 HG04184.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0162 a0001c0001t0001g0164 a0001c0001t0001g0180 others(3): Show a0001c0001t0001g0162 a0001c0001t0001g0164 a0001c0001t0001g0180 a0001c0001t0001g0205 a0001c0001t0001g0206 a0001c0001t0002g0163	6	18	0.3333	-13	c.-1- others(30): Show c.-1-28991_-1-28979delAAAAAAAAAAAAA	PTN	ENSG00000105894.13	transcript	ENST00000348225.7	protein_coding	1/4			chr7	TogoVar
PTN_chr7_137222341_137348733	137342755	TTTAAGGG others(6): Show TTTAAGGGTCTATG	T T	intron_variant intron_variant	MODIFIER	HG03710.hp2 HG03710.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0006	1	294	0.0034	-13	c.-2+ others(26): Show c.-2+671_-2+683delCATAGACCCTTAA	PTN	ENSG00000105894.13	transcript	ENST00000348225.7	protein_coding	1/4			chr7	TogoVar
PTOV1_chr19_49846159_49865742	49859444	AGCCAGGC others(6): Show AGCCAGGCATGATG	A A	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02647.hp2 NA18522.hp1 HG02145.hp2 HG02647.hp2 NA18522.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0023 a0001c0002t0001g0023	3	424	0.0071	-13	c.104 others(30): Show c.1042-537_1042-525delGGCATGATGGCCA	PTOV1	ENSG00000104960.15	transcript	ENST00000391842.6	protein_coding	10/11		INFO_REALIGN_3_PRIME	chr19	TogoVar
PTP4A2_chr1_31901421_31943368	31901836	TAAAAAAA others(6): Show TAAAAAAAAAAAAA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01934.hp1 HG01934.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0030 a0001c0001t0030	a0001c0001t0030g0036 a0001c0001t0030g0036	1	243	0.0041	-13	c.70 others(24): Show c.7003_*7015delTTTTTTTTTTTTT	PTP4A2	ENSG00000184007.22	transcript	ENST00000647444.2	protein_coding		4584		chr1	TogoVar
PTP4A2_chr1_31901421_31943368	31906776	ACACACAC others(6): Show ACACACACACACCC	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG04115.hp1 HG04115.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0028 a0001c0001t0028	a0001c0001t0028g0035 a0001c0001t0028g0035	1	352	0.0028	-13	c.20 others(24): Show c.2063_*2075delGGGTGTGTGTGTG	PTP4A2	ENSG00000184007.22	transcript	ENST00000647444.2	protein_coding	6/6	2063		chr1	TogoVar
PTP4A2_chr1_31901421_31943368	31908135	TTATATTA others(6): Show TTATATTATATATA	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01169.hp1 HG01169.hp2 HG01433.hp1 others(1): Show HG01169.hp1 HG01169.hp2 HG01433.hp1 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0007 a0001c0001t0001g0148 a0001c0001t0001g0156 others(1): Show a0001c0001t0001g0007 a0001c0001t0001g0148 a0001c0001t0001g0156 a0001c0001t0001g0222	4	259	0.0154	-13	c.70 others(22): Show c.704_*716delTATATATAATATA	PTP4A2	ENSG00000184007.22	transcript	ENST00000647444.2	protein_coding	6/6	704		chr1	TogoVar
PTP4A2_chr1_31901421_31943368	31927502	TGAACCTA others(6): Show TGAACCTAACATAA	T T	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00280.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0074 a0001c0001t0002g0074	1	352	0.0028	-13	c.-59 others(32): Show c.-593-7857_-593-7845delTTATGTTAGGTTC	PTP4A2	ENSG00000184007.22	transcript	ENST00000647444.2	protein_coding	1/5			chr1	TogoVar
PTPN12_chr7_77532295_77645069	77564746	GTTTTTTT others(6): Show GTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02723.hp2 HG02486.hp2 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0241 a0001c0001t0001g0242 a0001c0001t0001g0241 a0001c0001t0001g0242	2	68	0.0294	-13	c.100 others(30): Show c.100-6314_100-6302delTTTTTTTTTTTTT	PTPN12	ENSG00000127947.16	transcript	ENST00000248594.11	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr7	TogoVar
PTPN12_chr7_77532295_77645069	77641210	ATTTTTTT others(6): Show ATTTTTTTTTTTTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02257.hp1 HG02622.hp2 HG02895.hp2 others(2): Show HG02257.hp1 HG02622.hp2 HG02895.hp2 HG03453.hp2 HG04199.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0003c0003t0001 a0001c0001t0001 a0003c0003t0001	a0001c0001t0001g0143 a0001c0001t0001g0144 a0003c0003t0001g0183 others(2): Show a0001c0001t0001g0143 a0001c0001t0001g0144 a0003c0003t0001g0183 a0003c0003t0001g0202 a0003c0003t0001g0214	5	51	0.0980	-13	c.19 others(24): Show c.1931_*1943delTTTTTTTTTTTTT	PTPN12	ENSG00000127947.16	transcript	ENST00000248594.11	protein_coding		1142		chr7	TogoVar

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