Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
PTN_chr7_137222341_137348733	137342755	TTTAAGGG others(6): Show TTTAAGGGTCTATG	T T	intron_variant intron_variant	MODIFIER	HG03710.hp2 HG03710.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0006 a0001c0001t0001g0006	1	296	0.0034	-13	c.-2+ others(26): Show c.-2+671_-2+683delCATAGACCCTTAA	PTN	ENSG00000105894.13	transcript	ENST00000348225.7	protein_coding	1/4			chr7	TogoVar
PTOV1_chr19_49846159_49865742	49859444	AGCCAGGC others(6): Show AGCCAGGCATGATG	A A	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02647.hp2 NA18522.hp1 HG02145.hp2 HG02647.hp2 NA18522.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0025 a0001c0002t0001g0025	3	426	0.0070	-13	c.104 others(30): Show c.1042-537_1042-525delGGCATGATGGCCA	PTOV1	ENSG00000104960.15	transcript	ENST00000391842.6	protein_coding	10/11		INFO_REALIGN_3_PRIME	chr19	TogoVar
PTP4A2_chr1_31901421_31943368	31901836	TAAAAAAA others(6): Show TAAAAAAAAAAAAA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01934.hp1 HG01934.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0075 a0001c0001t0075	a0001c0001t0075g0014 a0001c0001t0075g0014	1	354	0.0028	-13	c.70 others(24): Show c.7003_*7015delTTTTTTTTTTTTT	PTP4A2	ENSG00000184007.22	transcript	ENST00000647444.2	protein_coding		4584		chr1	TogoVar
PTP4A2_chr1_31901421_31943368	31906776	ACACACAC others(6): Show ACACACACACACCC	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG04115.hp1 HG04115.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0073 a0001c0001t0073	a0001c0001t0073g0013 a0001c0001t0073g0013	1	354	0.0028	-13	c.20 others(24): Show c.2063_*2075delGGGTGTGTGTGTG	PTP4A2	ENSG00000184007.22	transcript	ENST00000647444.2	protein_coding	6/6	2063		chr1	TogoVar
PTP4A2_chr1_31901421_31943368	31908135	TTATATTA others(6): Show TTATATTATATATA	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01169.hp1 HG01169.hp2 HG01433.hp1 others(1): Show HG01169.hp1 HG01169.hp2 HG01433.hp1 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0154 a0001c0001t0009g0167 a0001c0001t0009g0251 others(1): Show a0001c0001t0009g0154 a0001c0001t0009g0167 a0001c0001t0009g0251 a0001c0001t0009g0262	4	354	0.0113	-13	c.70 others(22): Show c.704_*716delTATATATAATATA	PTP4A2	ENSG00000184007.22	transcript	ENST00000647444.2	protein_coding	6/6	704		chr1	TogoVar
PTP4A2_chr1_31901421_31943368	31927502	TGAACCTA others(6): Show TGAACCTAACATAA	T T	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00280.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0062 a0001c0001t0001g0062	1	354	0.0028	-13	c.-59 others(32): Show c.-593-7857_-593-7845delTTATGTTAGGTTC	PTP4A2	ENSG00000184007.22	transcript	ENST00000647444.2	protein_coding	1/5			chr1	TogoVar
PTPN12_chr7_77532295_77645069	77564746	GTTTTTTT others(6): Show GTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02723.hp2 HG02486.hp2 HG02723.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0265 a0001c0001t0001g0266 a0001c0001t0001g0265 a0001c0001t0001g0266	2	310	0.0065	-13	c.100 others(30): Show c.100-6314_100-6302delTTTTTTTTTTTTT	PTPN12	ENSG00000127947.16	transcript	ENST00000248594.11	protein_coding	1/17		INFO_REALIGN_3_PRIME	chr7	TogoVar
PTPN12_chr7_77532295_77645069	77641210	ATTTTTTT others(6): Show ATTTTTTTTTTTTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02257.hp1 HG02622.hp2 HG02895.hp2 others(2): Show HG02257.hp1 HG02622.hp2 HG02895.hp2 HG03453.hp2 HG04199.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0003c0003t0001 a0001c0001t0001 a0003c0003t0001	a0001c0001t0001g0136 a0001c0001t0001g0137 a0003c0003t0001g0193 others(2): Show a0001c0001t0001g0136 a0001c0001t0001g0137 a0003c0003t0001g0193 a0003c0003t0001g0212 a0003c0003t0001g0223	5	310	0.0161	-13	c.19 others(24): Show c.1931_*1943delTTTTTTTTTTTTT	PTPN12	ENSG00000127947.16	transcript	ENST00000248594.11	protein_coding		1142		chr7	TogoVar
PTPN13_chr4_86589315_86820161	86728643	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG02976.hp1	a0018 a0018	a0018c0031 a0018c0031	a0018c0031t0002 a0018c0031t0002	a0018c0031t0002g0013 a0018c0031t0002g0013	1	198	0.0051	-13	c.160 others(32): Show c.1609-3735_1609-3723delTTTTTTTTTTTTT	PTPN13	ENSG00000163629.13	transcript	ENST00000411767.7	protein_coding	10/47		INFO_REALIGN_3_PRIME	chr4	TogoVar
PTPN14_chr1_214343700_214556602	214433951	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG02083.hp1 HG02155.hp1 others(1): Show HG00408.hp1 HG02083.hp1 HG02155.hp1 NA19084.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0004 a0001c0001t0118 a0001c0001t0158 others(1): Show a0001c0001t0004 a0001c0001t0118 a0001c0001t0158 a0001c0002t0001	a0001c0001t0004g0073 a0001c0001t0118g0040 a0001c0001t0158g0220 others(1): Show a0001c0001t0004g0073 a0001c0001t0118g0040 a0001c0001t0158g0220 a0001c0002t0001g0032	4	272	0.0147	-13	c.344 others(32): Show c.344+17841_344+17853delTTTTTTTTTTTTT	PTPN14	ENSG00000152104.12	transcript	ENST00000366956.10	protein_coding	3/18			chr1	TogoVar
PTPN18_chr2_130351056_130380405	130361553	TCTTTCTT others(6): Show TCTTTCTTTCTTTC	T T	intron_variant intron_variant	MODIFIER	HG02293.hp2 HG03704.hp1 HG02293.hp2 HG03704.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0007 a0002c0002t0005 a0001c0001t0007 a0002c0002t0005	a0001c0001t0007g0152 a0002c0002t0005g0078 a0001c0001t0007g0152 a0002c0002t0005g0078	2	380	0.0053	-13	c.414 others(30): Show c.414+1917_414+1929delTTTCCTTTCTTTC	PTPN18	ENSG00000072135.13	transcript	ENST00000175756.10	protein_coding	5/14		INFO_REALIGN_3_PRIME	chr2	TogoVar
PTPN1_chr20_50505383_50590241	50535547	AGGACTCC others(6): Show AGGACTCCATCTGC	A A	intron_variant intron_variant	MODIFIER	NA19003.hp1 NA19003.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0303 a0001c0001t0001g0303	1	336	0.0030	-13	c.63+ others(30): Show c.63+24958_63+24970delGGACTCCATCTGC	PTPN1	ENSG00000196396.10	transcript	ENST00000371621.5	protein_coding	1/9			chr20	TogoVar
PTPN1_chr20_50505383_50590241	50589084	GAAAAAAA others(6): Show GAAAAAAAAAAAAA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp2 HG01069.hp2 HG01071.hp2 others(24): Show HG00639.hp2 HG01069.hp2 HG01071.hp2 HG01358.hp2 HG02040.hp2 HG02055.hp2 HG02572.hp1 HG02615.hp1 HG02622.hp1 HG02809.hp2 HG02886.hp2 HG02895.hp2 HG03139.hp2 HG03453.hp2 HG03490.hp2 HG03540.hp2 HG03579.hp2 NA18747.hp1 NA18953.hp1 NA18974.hp1 NA18985.hp2 NA18987.hp2 NA18993.hp2 NA19003.hp1 NA19005.hp1 NA19066.hp1 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0004 a0001c0001t0009 others(3): Show a0001c0001t0001 a0001c0001t0004 a0001c0001t0009 a0001c0001t0010 a0001c0002t0001 a0001c0002t0018	a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 others(24): Show a0001c0001t0001g0207 a0001c0001t0001g0208 a0001c0001t0001g0209 a0001c0001t0001g0210 a0001c0001t0001g0297 a0001c0001t0001g0298 a0001c0001t0001g0299 a0001c0001t0001g0300 a0001c0001t0001g0301 a0001c0001t0001g0302 a0001c0001t0001g0303 a0001c0001t0001g0305 a0001c0001t0001g0306 a0001c0001t0001g0307 a0001c0001t0001g0308 a0001c0001t0001g0316 a0001c0001t0004g0293 a0001c0001t0004g0294 a0001c0001t0004g0295 a0001c0001t0004g0296 a0001c0001t0009g0009 a0001c0001t0010g0009 a0001c0002t0001g0197 a0001c0002t0001g0206 a0001c0002t0001g0266 a0001c0002t0001g0283 a0001c0002t0018g0282	27	336	0.0804	-13	c.63 others(24): Show c.6370_*6382delAAAAAAAAAAAAA	PTPN1	ENSG00000196396.10	transcript	ENST00000371621.5	protein_coding		3844		chr20	TogoVar
PTPN21_chr14_88460778_88560007	88518406	ATATATAT others(6): Show ATATATATATTTTT	A A	intron_variant intron_variant	MODIFIER	HG03831.hp1 HG03831.hp1	a0014 a0014	a0014c0023 a0014c0023	a0014c0023t0006 a0014c0023t0006	a0014c0023t0006g0080 a0014c0023t0006g0080	1	348	0.0029	-13	c.181 others(30): Show c.181-1158_181-1146delAAAAATATATATA	PTPN21	ENSG00000070778.13	transcript	ENST00000556564.6	protein_coding	2/18			chr14	TogoVar
PTPN21_chr14_88460778_88560007	88518408	ATATATAT others(6): Show ATATATATTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02738.hp1 HG02738.hp1	a0004 a0004	a0004c0003 a0004c0003	a0004c0003t0025 a0004c0003t0025	a0004c0003t0025g0007 a0004c0003t0025g0007	1	348	0.0029	-13	c.181 others(30): Show c.181-1160_181-1148delAAAAAAATATATA	PTPN21	ENSG00000070778.13	transcript	ENST00000556564.6	protein_coding	2/18			chr14	TogoVar
PTPN21_chr14_88460778_88560007	88518410	ATATATTT others(6): Show ATATATTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG02976.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0006 a0002c0004t0006	a0002c0004t0006g0083 a0002c0004t0006g0083	1	348	0.0029	-13	c.181 others(30): Show c.181-1162_181-1150delAAAAAAAAATATA	PTPN21	ENSG00000070778.13	transcript	ENST00000556564.6	protein_coding	2/18			chr14	TogoVar
PTPN21_chr14_88460778_88560007	88518414	ATTTTTTT others(6): Show ATTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG01257.hp2 HG01258.hp2 others(1): Show HG00741.hp1 HG01257.hp2 HG01258.hp2 HG03209.hp2	a0002 a0003 a0002 a0003	a0002c0002 a0003c0005 a0002c0002 a0003c0005	a0002c0002t0012 a0003c0005t0026 a0002c0002t0012 a0003c0005t0026	a0002c0002t0012g0037 a0002c0002t0012g0038 a0002c0002t0012g0039 others(1): Show a0002c0002t0012g0037 a0002c0002t0012g0038 a0002c0002t0012g0039 a0003c0005t0026g0031	4	348	0.0115	-13	c.181 others(30): Show c.181-1166_181-1154delAAAAAAAAAAAAA	PTPN21	ENSG00000070778.13	transcript	ENST00000556564.6	protein_coding	2/18			chr14	TogoVar
PTPN21_chr14_88460778_88560007	88526547	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02451.hp1 NA19240.hp2 HG02451.hp1 NA19240.hp2	a0003 a0003	a0003c0009 a0003c0009	a0003c0009t0018 a0003c0009t0018	a0003c0009t0018g0022 a0003c0009t0018g0023 a0003c0009t0018g0022 a0003c0009t0018g0023	2	348	0.0058	-13	c.181 others(30): Show c.181-9299_181-9287delTTTTTTTTTTTTT	PTPN21	ENSG00000070778.13	transcript	ENST00000556564.6	protein_coding	2/18			chr14	TogoVar
PTPN23_chr3_47376021_47418435	47376136	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02486.hp2 HG02486.hp2	a0002 a0002	a0002c0012 a0002c0012	a0002c0012t0001 a0002c0012t0001	a0002c0012t0001g0005 a0002c0012t0001g0005	1	332	0.0030	-13	c.-49 others(24): Show c.-4960_-4948delTTTTTTTTTTTTT	PTPN23	ENSG00000076201.16	transcript	ENST00000265562.5	protein_coding		4884		chr3	TogoVar
PTPN2_chr18_12787152_12889237	12866766	TGGGAGGC others(6): Show TGGGAGGCCGAGGC	T T	intron_variant intron_variant	MODIFIER	NA19003.hp1 NA19003.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0014 a0001c0001t0002g0014	1	370	0.0027	-13	c.70- others(28): Show c.70-7525_70-7513delGCCTCGGCCTCCC	PTPN2	ENSG00000175354.20	transcript	ENST00000309660.10	protein_coding	1/8			chr18	TogoVar
PTPN3_chr9_109370700_109503307	109446922	CCGGCTAC others(6): Show CCGGCTACCATGGA	C C	intron_variant intron_variant	MODIFIER	HG00408.hp2 HG00544.hp1 HG00673.hp2 others(39): Show HG00408.hp2 HG00544.hp1 HG00673.hp2 HG01981.hp1 HG02004.hp1 HG02015.hp2 HG02056.hp2 HG02135.hp2 HG02165.hp1 HG03540.hp2 NA18612.hp1 NA18941.hp2 NA18952.hp1 NA18954.hp1 NA18955.hp1 NA18955.hp2 NA18960.hp2 NA18972.hp1 NA18975.hp1 NA18982.hp2 NA18983.hp2 NA18985.hp1 NA18987.hp2 NA18990.hp1 NA18994.hp2 NA19000.hp1 NA19009.hp1 NA19010.hp1 NA19054.hp1 NA19056.hp1 NA19057.hp1 NA19058.hp2 NA19060.hp1 NA19060.hp2 NA19064.hp2 NA19065.hp1 NA19066.hp1 NA19066.hp2 NA19074.hp1 NA19080.hp1 NA19081.hp1 NA19085.hp2	a0002 a0006 a0009 others(1): Show a0002 a0006 a0009 a0011	a0002c0002 a0002c0003 a0006c0008 others(2): Show a0002c0002 a0002c0003 a0006c0008 a0009c0011 a0011c0014	a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 others(16): Show a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 a0002c0002t0005 a0002c0002t0007 a0002c0002t0008 a0002c0002t0009 a0002c0002t0010 a0002c0002t0011 a0002c0002t0012 a0002c0002t0013 a0002c0002t0019 a0002c0003t0008 a0002c0003t0016 a0002c0003t0029 a0002c0003t0050 a0006c0008t0008 a0009c0011t0038 a0011c0014t0016	a0002c0002t0001g0001 a0002c0002t0001g0034 a0002c0002t0001g0038 others(38): Show a0002c0002t0001g0001 a0002c0002t0001g0034 a0002c0002t0001g0038 a0002c0002t0001g0253 a0002c0002t0002g0008 a0002c0002t0002g0103 a0002c0002t0003g0009 a0002c0002t0003g0020 a0002c0002t0003g0083 a0002c0002t0003g0087 a0002c0002t0005g0012 a0002c0002t0005g0013 a0002c0002t0007g0024 a0002c0002t0007g0040 a0002c0002t0008g0011 a0002c0002t0009g0015 a0002c0002t0010g0080 a0002c0002t0011g0027 a0002c0002t0011g0247 a0002c0002t0011g0254 a0002c0002t0012g0016 a0002c0002t0013g0249 a0002c0002t0019g0245 a0002c0003t0008g0017 a0002c0003t0008g0018 a0002c0003t0008g0021 a0002c0003t0008g0023 a0002c0003t0008g0037 a0002c0003t0008g0041 a0002c0003t0008g0088 a0002c0003t0016g0026 a0002c0003t0016g0039 a0002c0003t0016g0105 a0002c0003t0016g0198 a0002c0003t0029g0019 a0002c0003t0029g0110 a0002c0003t0050g0006 a0006c0008t0008g0035 a0006c0008t0008g0036 a0009c0011t0038g0255 a0011c0014t0016g0022	42	290	0.1448	-13	c.414 others(30): Show c.414-1643_414-1631delTCCATGGTAGCCG	PTPN3	ENSG00000070159.14	transcript	ENST00000374541.4	protein_coding	6/25			chr9	TogoVar
PTPN4_chr2_119754922_119989899	119775096	GAAAAAAA others(6): Show GAAAAAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG01891.hp2 HG02451.hp1 others(12): Show HG01884.hp1 HG01891.hp2 HG02451.hp1 HG02559.hp1 HG02615.hp1 HG02818.hp1 HG02895.hp2 HG02897.hp1 HG02976.hp1 HG03041.hp1 HG03139.hp2 HG03209.hp2 HG03453.hp1 HG03486.hp2 NA18972.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0006c0008 a0001c0001 a0006c0008	a0001c0001t0002 a0001c0001t0021 a0006c0008t0002 a0001c0001t0002 a0001c0001t0021 a0006c0008t0002	a0001c0001t0002g0153 a0001c0001t0002g0159 a0001c0001t0002g0160 others(12): Show a0001c0001t0002g0153 a0001c0001t0002g0159 a0001c0001t0002g0160 a0001c0001t0002g0162 a0001c0001t0002g0163 a0001c0001t0002g0164 a0001c0001t0002g0204 a0001c0001t0002g0213 a0001c0001t0002g0214 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0233 a0001c0001t0002g0234 a0001c0001t0021g0218 a0006c0008t0002g0161	15	252	0.0595	-13	c.-18 others(32): Show c.-18+14729_-18+14741delAAAAAAAAAAAAA	PTPN4	ENSG00000088179.9	transcript	ENST00000263708.7	protein_coding	1/26		INFO_REALIGN_3_PRIME	chr2	TogoVar
PTPN4_chr2_119754922_119989899	119922218	TAAAAAAA others(6): Show TAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01884.hp1 HG01891.hp2 others(14): Show HG01109.hp2 HG01884.hp1 HG01891.hp2 HG02257.hp1 HG02451.hp1 HG02559.hp1 HG02615.hp1 HG02818.hp1 HG02895.hp2 HG02897.hp1 HG02970.hp2 HG02976.hp1 HG03041.hp1 HG03139.hp2 HG03209.hp2 HG03453.hp1 HG03486.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0006c0008 a0001c0001 a0006c0008	a0001c0001t0002 a0001c0001t0021 a0006c0008t0002 a0001c0001t0002 a0001c0001t0021 a0006c0008t0002	a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0159 others(14): Show a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0159 a0001c0001t0002g0160 a0001c0001t0002g0162 a0001c0001t0002g0163 a0001c0001t0002g0164 a0001c0001t0002g0165 a0001c0001t0002g0213 a0001c0001t0002g0214 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0233 a0001c0001t0002g0234 a0001c0001t0021g0218 a0006c0008t0002g0161	17	252	0.0675	-13	c.100 others(32): Show c.1001+1987_1001+1999delAAAAAAAAAAAAA	PTPN4	ENSG00000088179.9	transcript	ENST00000263708.7	protein_coding	12/26		INFO_REALIGN_3_PRIME	chr2	TogoVar
PTPN4_chr2_119754922_119989899	119969552	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00423.hp2 HG00544.hp2 HG00609.hp2 others(83): Show HG00423.hp2 HG00544.hp2 HG00609.hp2 HG00639.hp2 HG00738.hp2 HG01069.hp1 HG01070.hp1 HG01109.hp2 HG01167.hp2 HG01169.hp1 HG01192.hp1 HG01255.hp2 HG01257.hp1 HG01261.hp1 HG01358.hp2 HG01433.hp2 HG01496.hp1 HG01516.hp1 HG01517.hp2 HG01884.hp1 HG01891.hp2 HG01928.hp2 HG01952.hp2 HG01975.hp1 HG01978.hp2 HG01981.hp2 HG02027.hp1 HG02055.hp1 HG02055.hp2 HG02083.hp2 HG02135.hp1 HG02148.hp1 HG02155.hp1 HG02257.hp1 HG02451.hp1 HG02523.hp2 HG02559.hp1 HG02572.hp2 HG02615.hp1 HG02630.hp2 HG02647.hp1 HG02698.hp2 HG02738.hp2 HG02818.hp1 HG02895.hp2 HG02896.hp2 HG02897.hp1 HG02965.hp2 HG02970.hp2 HG02976.hp1 HG03041.hp1 HG03139.hp2 HG03209.hp2 HG03239.hp2 HG03453.hp1 HG03486.hp2 HG03669.hp2 HG03831.hp1 HG03834.hp2 HG03942.hp1 NA18612.hp2 NA18939.hp1 NA18943.hp1 NA18946.hp2 NA18952.hp2 NA18954.hp1 NA18962.hp2 NA18967.hp2 NA18968.hp1 NA18972.hp2 NA18977.hp2 NA18986.hp1 NA18990.hp1 NA18993.hp2 NA18999.hp2 NA19009.hp2 NA19030.hp2 NA19063.hp2 NA19064.hp1 NA19065.hp1 NA19074.hp1 NA19086.hp1 NA19088.hp2 NA19240.hp1 NA20905.hp1 NA21309.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0006c0008 a0001c0001 a0006c0008	a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 others(14): Show a0001c0001t0002 a0001c0001t0006 a0001c0001t0007 a0001c0001t0011 a0001c0001t0014 a0001c0001t0018 a0001c0001t0019 a0001c0001t0020 a0001c0001t0021 a0001c0001t0022 a0001c0001t0023 a0001c0001t0024 a0001c0001t0026 a0001c0001t0028 a0001c0001t0029 a0001c0001t0042 a0006c0008t0002	a0001c0001t0002g0148 a0001c0001t0002g0152 a0001c0001t0002g0153 others(83): Show a0001c0001t0002g0148 a0001c0001t0002g0152 a0001c0001t0002g0153 a0001c0001t0002g0154 a0001c0001t0002g0155 a0001c0001t0002g0159 a0001c0001t0002g0160 a0001c0001t0002g0162 a0001c0001t0002g0163 a0001c0001t0002g0164 a0001c0001t0002g0165 a0001c0001t0002g0167 a0001c0001t0002g0168 a0001c0001t0002g0169 a0001c0001t0002g0170 a0001c0001t0002g0171 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0174 a0001c0001t0002g0175 a0001c0001t0002g0176 a0001c0001t0002g0177 a0001c0001t0002g0178 a0001c0001t0002g0180 a0001c0001t0002g0181 a0001c0001t0002g0183 a0001c0001t0002g0184 a0001c0001t0002g0185 a0001c0001t0002g0186 a0001c0001t0002g0187 a0001c0001t0002g0188 a0001c0001t0002g0189 a0001c0001t0002g0193 a0001c0001t0002g0196 a0001c0001t0002g0198 a0001c0001t0002g0200 a0001c0001t0002g0202 a0001c0001t0002g0203 a0001c0001t0002g0204 a0001c0001t0002g0206 a0001c0001t0002g0208 a0001c0001t0002g0209 a0001c0001t0002g0211 a0001c0001t0002g0212 a0001c0001t0002g0213 a0001c0001t0002g0214 a0001c0001t0002g0215 a0001c0001t0002g0216 a0001c0001t0002g0217 a0001c0001t0002g0221 a0001c0001t0002g0222 a0001c0001t0002g0224 a0001c0001t0002g0225 a0001c0001t0002g0226 a0001c0001t0002g0228 a0001c0001t0002g0230 a0001c0001t0002g0231 a0001c0001t0002g0233 a0001c0001t0002g0234 a0001c0001t0002g0238 a0001c0001t0006g0023 a0001c0001t0006g0166 a0001c0001t0006g0219 a0001c0001t0006g0220 a0001c0001t0006g0236 a0001c0001t0007g0191 a0001c0001t0007g0192 a0001c0001t0007g0194 a0001c0001t0007g0199 a0001c0001t0011g0232 a0001c0001t0011g0235 a0001c0001t0011g0237 a0001c0001t0014g0223 a0001c0001t0014g0239 a0001c0001t0018g0240 a0001c0001t0019g0207 a0001c0001t0020g0205 a0001c0001t0021g0218 a0001c0001t0022g0197 a0001c0001t0023g0147 a0001c0001t0024g0190 a0001c0001t0026g0227 a0001c0001t0028g0182 a0001c0001t0029g0179 a0001c0001t0042g0210 a0006c0008t0002g0161	86	252	0.3413	-13	c.269 others(32): Show c.2694+1592_2694+1604delTTTTTTTTTTTTT	PTPN4	ENSG00000088179.9	transcript	ENST00000263708.7	protein_coding	26/26		INFO_REALIGN_3_PRIME	chr2	TogoVar
PTPN9_chr15_75458251_75584315	75485354	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG00741.hp1 HG01361.hp2 HG00738.hp2 HG00741.hp1 HG01361.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0006 a0001c0001t0006	a0001c0001t0006g0302 a0001c0001t0006g0307 a0001c0001t0006g0320 a0001c0001t0006g0302 a0001c0001t0006g0307 a0001c0001t0006g0320	3	326	0.0092	-13	c.106 others(32): Show c.1062+4841_1062+4853delAAAAAAAAAAAAA	PTPN9	ENSG00000169410.11	transcript	ENST00000618819.5	protein_coding	8/12			chr15	TogoVar
PTPN9_chr15_75458251_75584315	75540704	TTTGGGAG others(6): Show TTTGGGAGGCTGAG	T T	intron_variant intron_variant	MODIFIER	NA18985.hp1 NA18985.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0255 a0001c0001t0002g0255	1	326	0.0031	-13	c.64- others(30): Show c.64-13456_64-13444delCTCAGCCTCCCAA	PTPN9	ENSG00000169410.11	transcript	ENST00000618819.5	protein_coding	1/12			chr15	TogoVar
PTPN9_chr15_75458251_75584315	75582687	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00140.hp1 HG00642.hp2 HG00733.hp2 others(41): Show HG00140.hp1 HG00642.hp2 HG00733.hp2 HG01106.hp1 HG01123.hp2 HG01169.hp1 HG01346.hp2 HG01358.hp2 HG01891.hp1 HG02055.hp1 HG02129.hp2 HG02155.hp2 HG02280.hp2 HG02486.hp1 HG02602.hp1 HG02615.hp1 HG02647.hp1 HG02683.hp2 HG02698.hp2 HG02717.hp2 HG02809.hp2 HG02886.hp1 HG02895.hp2 HG02896.hp2 HG02922.hp2 HG03017.hp2 HG03041.hp2 HG03130.hp1 HG03139.hp1 HG03225.hp1 HG03453.hp1 HG03669.hp1 HG03688.hp2 HG03834.hp2 HG04199.hp1 HG04228.hp1 NA18522.hp2 NA18906.hp2 NA18950.hp2 NA18962.hp1 NA19001.hp1 NA19043.hp2 NA19057.hp1 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0001 a0001c0001t0003 a0001c0001t0010 others(6): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0010 a0001c0001t0018 a0001c0001t0022 a0001c0001t0023 a0001c0001t0024 a0001c0001t0025 a0001c0007t0003	a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 others(41): Show a0001c0001t0001g0090 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0096 a0001c0001t0001g0172 a0001c0001t0003g0001 a0001c0001t0003g0006 a0001c0001t0003g0008 a0001c0001t0003g0009 a0001c0001t0003g0010 a0001c0001t0003g0012 a0001c0001t0003g0013 a0001c0001t0003g0014 a0001c0001t0003g0015 a0001c0001t0003g0017 a0001c0001t0003g0018 a0001c0001t0003g0019 a0001c0001t0003g0020 a0001c0001t0003g0021 a0001c0001t0003g0022 a0001c0001t0003g0023 a0001c0001t0003g0024 a0001c0001t0003g0025 a0001c0001t0003g0026 a0001c0001t0003g0029 a0001c0001t0003g0030 a0001c0001t0003g0031 a0001c0001t0003g0032 a0001c0001t0003g0035 a0001c0001t0003g0036 a0001c0001t0003g0037 a0001c0001t0003g0038 a0001c0001t0010g0002 a0001c0001t0010g0003 a0001c0001t0010g0004 a0001c0001t0010g0005 a0001c0001t0010g0007 a0001c0001t0010g0011 a0001c0001t0018g0095 a0001c0001t0022g0027 a0001c0001t0023g0028 a0001c0001t0024g0034 a0001c0001t0025g0033 a0001c0007t0003g0016	44	326	0.1350	-13	c.-39 others(24): Show c.-3924_-3912delAAAAAAAAAAAAA	PTPN9	ENSG00000169410.11	transcript	ENST00000618819.5	protein_coding		3373		chr15	TogoVar
PTPRA_chr20_2868481_3043669	2868618	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00597.hp1 HG00597.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0103 a0001c0001t0001g0103	1	356	0.0028	-13	c.-52 others(24): Show c.-5270_-5258delTTTTTTTTTTTTT	PTPRA	ENSG00000132670.21	transcript	ENST00000399903.7	protein_coding		4862		chr20	TogoVar
PTPRB_chr12_70510870_70642429	70564836	AAATAATA others(6): Show AAATAATAAATAAT	A A	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00735.hp1 HG01070.hp2 others(16): Show HG00099.hp1 HG00735.hp1 HG01070.hp2 HG01071.hp2 HG01074.hp1 HG01358.hp1 HG02004.hp2 HG02145.hp2 HG02155.hp1 HG02258.hp1 HG02602.hp2 HG02647.hp1 HG02698.hp1 HG03669.hp1 HG03927.hp2 NA18946.hp2 NA18984.hp1 NA19060.hp2 NA21309.hp2	a0001 a0002 a0003 others(4): Show a0001 a0002 a0003 a0004 a0006 a0035 a0043	a0001c0001 a0001c0002 a0001c0005 others(11): Show a0001c0001 a0001c0002 a0001c0005 a0001c0098 a0002c0011 a0002c0080 a0003c0003 a0003c0014 a0004c0006 a0004c0033 a0006c0015 a0006c0018 a0035c0109 a0043c0107	a0001c0001t0002 a0001c0001t0005 a0001c0002t0001 others(13): Show a0001c0001t0002 a0001c0001t0005 a0001c0002t0001 a0001c0002t0015 a0001c0005t0002 a0001c0098t0001 a0002c0011t0035 a0002c0080t0001 a0003c0003t0001 a0003c0014t0005 a0004c0006t0032 a0004c0033t0004 a0006c0015t0004 a0006c0018t0001 a0035c0109t0001 a0043c0107t0002	a0001c0001t0002g0063 a0001c0001t0005g0130 a0001c0002t0001g0070 others(16): Show a0001c0001t0002g0063 a0001c0001t0005g0130 a0001c0002t0001g0070 a0001c0002t0001g0075 a0001c0002t0001g0129 a0001c0002t0015g0128 a0001c0005t0002g0045 a0001c0098t0001g0090 a0002c0011t0035g0109 a0002c0080t0001g0246 a0003c0003t0001g0125 a0003c0003t0001g0131 a0003c0014t0005g0011 a0004c0006t0032g0170 a0004c0033t0004g0191 a0006c0015t0004g0186 a0006c0018t0001g0158 a0035c0109t0001g0108 a0043c0107t0002g0265	19	300	0.0633	-13	c.390 others(32): Show c.3904+1586_3904+1598delATTATTTATTATT	PTPRB	ENSG00000127329.16	transcript	ENST00000334414.11	protein_coding	15/33			chr12	TogoVar
PTPRD_chr9_8309246_10618002	8410468	CTTTGTCC others(6): Show CTTTGTCCAATTAG	C C	intron_variant intron_variant	MODIFIER	HG02683.hp2 HG02683.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0026 a0001c0007t0026	a0001c0007t0026g0034 a0001c0007t0026g0034	1	34	0.0294	-13	c.408 others(32): Show c.4087-5821_4087-5809delCTAATTGGACAAA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	35/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	8516798	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02683.hp2 HG02683.hp2	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0026 a0001c0007t0026	a0001c0007t0026g0034 a0001c0007t0026g0034	1	34	0.0294	-13	c.154 others(32): Show c.1543+1037_1543+1049delAAAAAAAAAAAAA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	21/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	9275186	ATATATAT others(6): Show ATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG00642.hp2 HG02683.hp1 others(4): Show HG00642.hp1 HG00642.hp2 HG02683.hp1 HG02683.hp2 HG03225.hp2 HG03834.hp1 NA19030.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0007 others(3): Show a0001c0001 a0001c0003 a0001c0007 a0001c0013 a0001c0014 a0002c0005	a0001c0001t0001 a0001c0001t0024 a0001c0003t0004 others(4): Show a0001c0001t0001 a0001c0001t0024 a0001c0003t0004 a0001c0007t0026 a0001c0013t0016 a0001c0014t0012 a0002c0005t0010	a0001c0001t0001g0006 a0001c0001t0024g0032 a0001c0003t0004g0027 others(4): Show a0001c0001t0001g0006 a0001c0001t0024g0032 a0001c0003t0004g0027 a0001c0007t0026g0034 a0001c0013t0016g0028 a0001c0014t0012g0014 a0002c0005t0010g0026	7	34	0.2059	-13	c.-20 others(34): Show c.-202-91836_-202-91824delATATATATATATA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	9/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	9328618	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG02055.hp1 HG03139.hp1 others(2): Show HG01099.hp1 HG02055.hp1 HG03139.hp1 HG03579.hp1 HG03834.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0011 a0004c0010	a0001c0001t0022 a0001c0002t0011 a0001c0003t0007 others(2): Show a0001c0001t0022 a0001c0002t0011 a0001c0003t0007 a0001c0011t0017 a0004c0010t0006	a0001c0001t0022g0012 a0001c0002t0011g0030 a0001c0003t0007g0029 others(2): Show a0001c0001t0022g0012 a0001c0002t0011g0030 a0001c0003t0007g0029 a0001c0011t0017g0016 a0004c0010t0006g0007	5	34	0.1471	-13	c.-20 others(34): Show c.-203+68818_-203+68830delAAAAAAAAAAAAA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	9/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	9363669	GGGCCTGA others(6): Show GGGCCTGAAGCTCA	G G	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0018 a0001c0001t0002g0018	1	34	0.0294	-13	c.-20 others(34): Show c.-203+33767_-203+33779delTGAGCTTCAGGCC	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	9/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	9606965	TAAAAAAA others(6): Show TAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0018 a0001c0001t0002g0018	1	34	0.0294	-13	c.-28 others(34): Show c.-286-32197_-286-32185delTTTTTTTTTTTTT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	7/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	9840761	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG01109.hp1	a0001 a0001	a0001c0015 a0001c0015	a0001c0015t0025 a0001c0015t0025	a0001c0015t0025g0033 a0001c0015t0025g0033	1	34	0.0294	-13	c.-36 others(34): Show c.-367-73923_-367-73911delTTTTTTTTTTTTT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	5/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	9860754	TACTGATC others(6): Show TACTGATCCACACC	T T	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0018 a0001c0004t0018	a0001c0004t0018g0015 a0001c0004t0018g0015	1	34	0.0294	-13	c.-36 others(34): Show c.-368+77740_-368+77752delGGTGTGGATCAGT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	5/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	9980608	CAAAAAAA others(6): Show CAAAAAAAAACAAA	C C	intron_variant intron_variant	MODIFIER	HG02622.hp2 HG02622.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0009 a0001c0002t0001g0009	1	34	0.0294	-13	c.-47 others(34): Show c.-471-42011_-471-41999delTTTGTTTTTTTTT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	4/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	10050559	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0018 a0001c0001t0002g0018	1	34	0.0294	-13	c.-54 others(34): Show c.-544-16782_-544-16770delTTTTTTTTTTTTT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	3/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	10060832	CTTCCTTC others(6): Show CTTCCTTCCTTCCT	C C	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00642.hp2	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0010 a0002c0005t0010	a0002c0005t0010g0026 a0002c0005t0010g0026	1	34	0.0294	-13	c.-54 others(34): Show c.-544-27055_-544-27043delAGGAAGGAAGGAA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	3/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	10060843	CCTTTCCT others(6): Show CCTTTCCTTTCTTT	C C	intron_variant intron_variant	MODIFIER	HG02055.hp1 HG02055.hp1	a0001 a0001	a0001c0011 a0001c0011	a0001c0011t0017 a0001c0011t0017	a0001c0011t0017g0016 a0001c0011t0017g0016	1	34	0.0294	-13	c.-54 others(34): Show c.-544-27066_-544-27054delAAAGAAAGGAAAG	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	3/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	10190408	AAAAAAAA others(6): Show AAAAAAAAAAAAAC	A A	intron_variant intron_variant	MODIFIER	HG01981.hp1 HG02055.hp1 HG03579.hp1 others(1): Show HG01981.hp1 HG02055.hp1 HG03579.hp1 NA19030.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0001c0011 a0003c0009 a0001c0001 a0001c0011 a0003c0009	a0001c0001t0022 a0001c0001t0024 a0001c0011t0017 others(1): Show a0001c0001t0022 a0001c0001t0024 a0001c0011t0017 a0003c0009t0008	a0001c0001t0022g0012 a0001c0001t0024g0032 a0001c0011t0017g0016 others(1): Show a0001c0001t0022g0012 a0001c0001t0024g0032 a0001c0011t0017g0016 a0003c0009t0008g0003	4	34	0.1177	-13	c.-54 others(36): Show c.-545+150542_-545+150554delGTTTTTTTTTTTT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	3/45			chr9	TogoVar
PTPRG_chr3_61556571_62302609	61738978	TTTTTTTT others(6): Show TTTTTTTTTTTTTG	T T	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00639.hp1 HG00738.hp1 others(18): Show HG00280.hp2 HG00639.hp1 HG00738.hp1 HG01496.hp1 HG02027.hp1 HG02145.hp2 HG02559.hp2 HG02698.hp1 HG02809.hp1 HG02965.hp1 HG02970.hp1 HG03471.hp1 HG03540.hp1 HG03669.hp1 HG03831.hp2 HG04199.hp1 HG04199.hp2 NA18522.hp2 NA18998.hp2 NA19087.hp2 NA19240.hp2	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0005 a0006	a0001c0001 a0001c0005 a0001c0008 others(8): Show a0001c0001 a0001c0005 a0001c0008 a0001c0015 a0001c0019 a0002c0002 a0002c0003 a0003c0004 a0004c0006 a0005c0011 a0006c0007	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(12): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0005t0009 a0001c0008t0005 a0001c0015t0001 a0001c0019t0001 a0002c0002t0001 a0002c0002t0002 a0002c0003t0002 a0002c0003t0008 a0003c0004t0001 a0004c0006t0002 a0005c0011t0002 a0006c0007t0004	a0001c0001t0001g0045 a0001c0001t0002g0047 a0001c0001t0002g0050 others(18): Show a0001c0001t0001g0045 a0001c0001t0002g0047 a0001c0001t0002g0050 a0001c0001t0003g0012 a0001c0005t0009g0022 a0001c0008t0005g0030 a0001c0008t0005g0068 a0001c0015t0001g0011 a0001c0019t0001g0069 a0002c0002t0001g0064 a0002c0002t0002g0021 a0002c0002t0002g0046 a0002c0002t0002g0051 a0002c0002t0002g0078 a0002c0003t0002g0052 a0002c0003t0002g0075 a0002c0003t0008g0016 a0003c0004t0001g0070 a0004c0006t0002g0081 a0005c0011t0002g0080 a0006c0007t0004g0031	21	94	0.2234	-13	c.86- others(28): Show c.86-9887_86-9875delGTTTTTTTTTTTT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	1/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61866582	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0004 a0004	a0004c0006 a0004c0006	a0004c0006t0002 a0004c0006t0002	a0004c0006t0002g0081 a0004c0006t0002g0081	1	94	0.0106	-13	c.190 others(34): Show c.190+117624_190+117636delTTTTTTTTTTTTT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	2/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61939928	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG02559.hp1 HG02647.hp2 others(8): Show HG00738.hp1 HG02559.hp1 HG02647.hp2 HG02723.hp2 HG02965.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03471.hp1 NA18522.hp2 NA19030.hp2	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0009	a0001c0001 a0001c0005 a0001c0016 others(3): Show a0001c0001 a0001c0005 a0001c0016 a0002c0002 a0004c0006 a0009c0018	a0001c0001t0002 a0001c0001t0007 a0001c0005t0001 others(5): Show a0001c0001t0002 a0001c0001t0007 a0001c0005t0001 a0001c0005t0009 a0001c0016t0001 a0002c0002t0002 a0004c0006t0002 a0009c0018t0006	a0001c0001t0002g0010 a0001c0001t0002g0089 a0001c0001t0002g0093 others(8): Show a0001c0001t0002g0010 a0001c0001t0002g0089 a0001c0001t0002g0093 a0001c0001t0007g0083 a0001c0005t0001g0014 a0001c0005t0009g0022 a0001c0016t0001g0059 a0002c0002t0002g0021 a0004c0006t0002g0081 a0004c0006t0002g0088 a0009c0018t0006g0039	11	94	0.1170	-13	c.191 others(32): Show c.191-49673_191-49661delTTTTTTTTTTTTT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	2/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	62166197	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG01071.hp2 HG01243.hp1 others(7): Show HG00280.hp2 HG01071.hp2 HG01243.hp1 HG02040.hp1 HG02723.hp1 HG02723.hp2 HG02896.hp1 HG02922.hp2 HG03041.hp1 HG03669.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0016 a0002c0002 others(1): Show a0001c0001 a0001c0016 a0002c0002 a0004c0006	a0001c0001t0001 a0001c0001t0006 a0001c0001t0016 others(4): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0016 a0001c0016t0001 a0002c0002t0002 a0002c0002t0011 a0004c0006t0001	a0001c0001t0001g0001 a0001c0001t0001g0042 a0001c0001t0001g0072 others(7): Show a0001c0001t0001g0001 a0001c0001t0001g0042 a0001c0001t0001g0072 a0001c0001t0006g0037 a0001c0001t0016g0029 a0001c0016t0001g0059 a0002c0002t0002g0051 a0002c0002t0002g0078 a0002c0002t0011g0056 a0004c0006t0001g0027	10	94	0.1064	-13	c.841 others(30): Show c.841-1750_841-1738delTTTTTTTTTTTTT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	7/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRJ_chr11_47975559_48175839	48021408	TAAATAAA others(6): Show TAAATAAATAAATA	T T	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01884.hp1 HG01891.hp1 others(11): Show HG01109.hp2 HG01884.hp1 HG01891.hp1 HG02055.hp1 HG02451.hp1 HG02559.hp1 HG02896.hp2 HG02897.hp1 HG02976.hp1 HG03540.hp2 HG06807.hp2 NA18522.hp1 NA19030.hp1 NA19240.hp2	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0005	a0001c0003 a0001c0004 a0001c0029 others(3): Show a0001c0003 a0001c0004 a0001c0029 a0002c0001 a0003c0002 a0005c0012	a0001c0003t0013 a0001c0004t0012 a0001c0004t0045 others(5): Show a0001c0003t0013 a0001c0004t0012 a0001c0004t0045 a0001c0029t0040 a0002c0001t0007 a0003c0002t0001 a0005c0012t0036 a0005c0012t0070	a0001c0003t0013g0075 a0001c0004t0012g0039 a0001c0004t0012g0043 others(11): Show a0001c0003t0013g0075 a0001c0004t0012g0039 a0001c0004t0012g0043 a0001c0004t0012g0044 a0001c0004t0012g0045 a0001c0004t0012g0046 a0001c0004t0045g0042 a0001c0029t0040g0020 a0002c0001t0007g0017 a0002c0001t0007g0040 a0003c0002t0001g0004 a0003c0002t0001g0005 a0005c0012t0036g0041 a0005c0012t0070g0016	14	216	0.0648	-13	c.96+ others(30): Show c.96+40408_96+40420delTAAATAAAATAAA	PTPRJ	ENSG00000149177.15	transcript	ENST00000418331.7	protein_coding	1/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
PTPRJ_chr11_47975559_48175839	48026996	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02895.hp2 HG03209.hp2 others(1): Show HG02451.hp2 HG02895.hp2 HG03209.hp2 HG03225.hp2	a0006 a0006	a0006c0009 a0006c0009	a0006c0009t0003 a0006c0009t0005 a0006c0009t0016 a0006c0009t0003 a0006c0009t0005 a0006c0009t0016	a0006c0009t0003g0013 a0006c0009t0005g0012 a0006c0009t0005g0014 others(1): Show a0006c0009t0003g0013 a0006c0009t0005g0012 a0006c0009t0005g0014 a0006c0009t0016g0011	4	216	0.0185	-13	c.96+ others(30): Show c.96+46002_96+46014delTTTTTTTTTTTTT	PTPRJ	ENSG00000149177.15	transcript	ENST00000418331.7	protein_coding	1/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
PTPRJ_chr11_47975559_48175839	48046906	ATATATAT others(6): Show ATATATATTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02897.hp1 HG02896.hp2 HG02897.hp1	a0003 a0003	a0003c0002 a0003c0002	a0003c0002t0001 a0003c0002t0001	a0003c0002t0001g0004 a0003c0002t0001g0005 a0003c0002t0001g0004 a0003c0002t0001g0005	2	216	0.0093	-13	c.97- others(30): Show c.97-63150_97-63138delATATATTTTTTTT	PTPRJ	ENSG00000149177.15	transcript	ENST00000418331.7	protein_coding	1/24		INFO_REALIGN_3_PRIME	chr11	TogoVar
PTPRJ_chr11_47975559_48175839	48114429	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG03130.hp2 HG03486.hp2 HG02723.hp2 HG03130.hp2 HG03486.hp2	a0001 a0001	a0001c0004 a0001c0004	a0001c0004t0023 a0001c0004t0034 a0001c0004t0023 a0001c0004t0034	a0001c0004t0023g0033 a0001c0004t0023g0035 a0001c0004t0034g0034 a0001c0004t0023g0033 a0001c0004t0023g0035 a0001c0004t0034g0034	3	216	0.0139	-13	c.352 others(30): Show c.352+1463_352+1475delAAAAAAAAAAAAA	PTPRJ	ENSG00000149177.15	transcript	ENST00000418331.7	protein_coding	3/24		INFO_REALIGN_3_PRIME	chr11	TogoVar

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