Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
STAG1_chr3_136331236_136757378	136420244	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0002 a0002c0004t0002	a0002c0004t0002g0238 a0002c0004t0002g0238	1	204	0.0049	-13	c.210 others(30): Show c.2108+836_2108+848delTTTTTTTTTTTTT	STAG1	ENSG00000118007.13	transcript	ENST00000383202.7	protein_coding	20/33			chr3	TogoVar
STAG1_chr3_136331236_136757378	136447596	ATTTTTTT others(6): Show ATTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01256.hp2 HG01256.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0099 a0001c0001t0004g0099	1	30	0.0333	-13	c.142 others(32): Show c.1429-4205_1429-4193delAAAAAAAAAAAAA	STAG1	ENSG00000118007.13	transcript	ENST00000383202.7	protein_coding	14/33			chr3	TogoVar
STAG1_chr3_136331236_136757378	136458125	ATTTTTTT others(6): Show ATTTTTTTCTGTGT	A A	intron_variant intron_variant	MODIFIER	HG02809.hp2 HG02809.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0186 a0002c0003t0002g0186	1	238	0.0042	-13	c.131 others(32): Show c.1314-5991_1314-5979delACACAGAAAAAAA	STAG1	ENSG00000118007.13	transcript	ENST00000383202.7	protein_coding	13/33			chr3	TogoVar
STAG1_chr3_136331236_136757378	136475138	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00639.hp2 HG01074.hp2 others(8): Show HG00099.hp2 HG00639.hp2 HG01074.hp2 HG01256.hp2 HG01261.hp2 HG03669.hp1 HG03927.hp2 HG04184.hp2 NA18973.hp1 NA19000.hp1 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0019 a0001c0001t0001 a0001c0001t0004 a0001c0001t0019	a0001c0001t0001g0113 a0001c0001t0004g0096 a0001c0001t0004g0097 others(8): Show a0001c0001t0001g0113 a0001c0001t0004g0096 a0001c0001t0004g0097 a0001c0001t0004g0098 a0001c0001t0004g0099 a0001c0001t0004g0100 a0001c0001t0004g0101 a0001c0001t0004g0102 a0001c0001t0004g0121 a0001c0001t0004g0122 a0001c0001t0019g0108	11	58	0.1897	-13	c.102 others(32): Show c.1027-1514_1027-1502delAAAAAAAAAAAAA	STAG1	ENSG00000118007.13	transcript	ENST00000383202.7	protein_coding	10/33			chr3	TogoVar
STAG1_chr3_136331236_136757378	136536703	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0014 a0001c0002t0014	a0001c0002t0014g0192 a0001c0002t0014g0192	1	137	0.0073	-13	c.471 others(30): Show c.471+5403_471+5415delTTTTTTTTTTTTT	STAG1	ENSG00000118007.13	transcript	ENST00000383202.7	protein_coding	6/33			chr3	TogoVar
STAG1_chr3_136331236_136757378	136540822	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02818.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0089 a0001c0001t0002g0089	1	32	0.0313	-13	c.471 others(30): Show c.471+1284_471+1296delTTTTTTTTTTTTT	STAG1	ENSG00000118007.13	transcript	ENST00000383202.7	protein_coding	6/33			chr3	TogoVar
STAG1_chr3_136331236_136757378	136600872	TTTGTTTT others(6): Show TTTGTTTTGTTTTG	T T	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03195.hp2 HG03139.hp1 HG03195.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0007 a0001c0002t0007	a0001c0002t0007g0189 a0001c0002t0007g0190 a0001c0002t0007g0189 a0001c0002t0007g0190	2	238	0.0084	-13	c.297 others(30): Show c.297+3424_297+3436delCAAAACAAAACAA	STAG1	ENSG00000118007.13	transcript	ENST00000383202.7	protein_coding	4/33			chr3	TogoVar
STAG1_chr3_136331236_136757378	136615424	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG03669.hp2 HG03669.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0037 a0001c0001t0001g0037	1	82	0.0122	-13	c.132 others(30): Show c.132+7709_132+7721delTTTTTTTTTTTTT	STAG1	ENSG00000118007.13	transcript	ENST00000383202.7	protein_coding	3/33			chr3	TogoVar
STAG1_chr3_136331236_136757378	136692313	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02572.hp1 HG03195.hp1 HG01884.hp2 HG02572.hp1 HG03195.hp1	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0011 a0002c0003t0002 a0002c0003t0011	a0002c0003t0002g0178 a0002c0003t0002g0179 a0002c0003t0011g0185 a0002c0003t0002g0178 a0002c0003t0002g0179 a0002c0003t0011g0185	3	104	0.0288	-13	c.-84 others(32): Show c.-84+59869_-84+59881delTTTTTTTTTTTTT	STAG1	ENSG00000118007.13	transcript	ENST00000383202.7	protein_coding	1/33			chr3	TogoVar
STAG1_chr3_136331236_136757378	136702074	AAAGAGAG others(6): Show AAAGAGAGAGAGAG	A A	intron_variant intron_variant	MODIFIER	HG02970.hp1 HG02970.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0119 a0001c0001t0004g0119	1	231	0.0043	-13	c.-84 others(32): Show c.-84+50108_-84+50120delCTCTCTCTCTCTT	STAG1	ENSG00000118007.13	transcript	ENST00000383202.7	protein_coding	1/33			chr3	TogoVar
STAMBPL1_chr10_88875245_88928487	88925623	GTTTTTTT others(6): Show GTTTTTTTTTTTTT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02976.hp1 HG03098.hp2 NA19043.hp1 HG02976.hp1 HG03098.hp2 NA19043.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0052 a0002c0002t0001g0178 a0002c0002t0001g0179 a0002c0002t0001g0052 a0002c0002t0001g0178 a0002c0002t0001g0179	3	31	0.0968	-13	c.24 others(24): Show c.2400_*2412delTTTTTTTTTTTTT	STAMBPL1	ENSG00000138134.12	transcript	ENST00000371926.8	protein_coding		2137		chr10	TogoVar
STAMBP_chr2_73823961_73872168	73834229	AAAAAAAA others(6): Show AAAAAAAAATATAT	A A	intron_variant intron_variant	MODIFIER	NA19043.hp2 NA19043.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0025 a0001c0002t0025	a0001c0002t0025g0077 a0001c0002t0025g0077	1	363	0.0028	-13	c.203 others(30): Show c.203+3172_203+3184delAAAAAAATATATA	STAMBP	ENSG00000124356.17	transcript	ENST00000394070.7	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
STAMBP_chr2_73823961_73872168	73834233	AAAAATAT others(6): Show AAAAATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0314 a0001c0001t0008g0314	1	364	0.0027	-13	c.203 others(30): Show c.203+3176_203+3188delAAATATATATATA	STAMBP	ENSG00000124356.17	transcript	ENST00000394070.7	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
STAMBP_chr2_73823961_73872168	73834235	AAATATAT others(6): Show AAATATATATATAT	A A	intron_variant intron_variant	MODIFIER	NA18946.hp2 NA18946.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0211 a0001c0001t0002g0211	1	364	0.0027	-13	c.203 others(30): Show c.203+3178_203+3190delATATATATATATA	STAMBP	ENSG00000124356.17	transcript	ENST00000394070.7	protein_coding	2/9		INFO_REALIGN_3_PRIME	chr2	TogoVar
STAMBP_chr2_73823961_73872168	73834237	ATATATAT others(6): Show ATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG00597.hp2 HG01169.hp2 others(20): Show HG00140.hp2 HG00597.hp2 HG01169.hp2 HG01175.hp1 HG01952.hp2 HG02056.hp2 HG02165.hp1 HG02735.hp1 HG03688.hp1 HG04204.hp1 NA18948.hp1 NA18962.hp1 NA18968.hp1 NA18974.hp2 NA18978.hp2 NA18998.hp2 NA19000.hp2 NA19012.hp1 NA19065.hp1 NA19067.hp2 NA19075.hp2 NA19084.hp1 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0007 others(2): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0007 a0001c0001t0013 a0001c0001t0040	a0001c0001t0002g0021 a0001c0001t0002g0080 a0001c0001t0002g0214 others(19): Show a0001c0001t0002g0021 a0001c0001t0002g0080 a0001c0001t0002g0214 a0001c0001t0002g0225 a0001c0001t0002g0240 a0001c0001t0002g0243 a0001c0001t0002g0245 a0001c0001t0002g0256 a0001c0001t0002g0263 a0001c0001t0002g0267 a0001c0001t0002g0280 a0001c0001t0002g0300 a0001c0001t0004g0005 a0001c0001t0004g0238 a0001c0001t0004g0251 a0001c0001t0004g0259 a0001c0001t0004g0269 a0001c0001t0007g0242 a0001c0001t0007g0304 a0001c0001t0013g0218 a0001c0001t0013g0260 a0001c0001t0040g0287	23	280	0.0821	-13	c.203 others(30): Show c.203+3179_203+3191delTATATATATATAT	STAMBP	ENSG00000124356.17	transcript	ENST00000394070.7	protein_coding	2/9			chr2	TogoVar
STAM_chr10_17639151_17721824	17703015	AAAAAAAA others(6): Show AAAAAAAAAAAAAG	A A	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00323.hp2 HG00609.hp1 others(25): Show HG00280.hp2 HG00323.hp2 HG00609.hp1 HG00639.hp2 HG01081.hp2 HG01109.hp1 HG01123.hp2 HG01167.hp2 HG01169.hp1 HG01175.hp2 HG01257.hp1 HG01258.hp2 HG01261.hp2 HG01358.hp2 HG01934.hp1 HG02004.hp2 HG02129.hp1 HG02258.hp1 HG02280.hp2 HG02896.hp1 HG02965.hp2 HG03209.hp1 NA18959.hp1 NA18983.hp1 NA18985.hp2 NA18993.hp2 NA19000.hp1 NA19065.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0008 a0001c0001t0009 others(2): Show a0001c0001t0005 a0001c0001t0008 a0001c0001t0009 a0001c0001t0017 a0001c0001t0029	a0001c0001t0005g0004 a0001c0001t0005g0010 a0001c0001t0005g0011 others(22): Show a0001c0001t0005g0004 a0001c0001t0005g0010 a0001c0001t0005g0011 a0001c0001t0005g0041 a0001c0001t0005g0042 a0001c0001t0005g0043 a0001c0001t0005g0044 a0001c0001t0005g0045 a0001c0001t0005g0046 a0001c0001t0005g0047 a0001c0001t0005g0049 a0001c0001t0005g0051 a0001c0001t0005g0052 a0001c0001t0005g0053 a0001c0001t0005g0054 a0001c0001t0005g0055 a0001c0001t0008g0011 a0001c0001t0008g0040 a0001c0001t0008g0050 a0001c0001t0009g0308 a0001c0001t0009g0309 a0001c0001t0009g0380 a0001c0001t0017g0377 a0001c0001t0017g0378 a0001c0001t0029g0376	28	424	0.0660	-13	c.913 others(30): Show c.913-1411_913-1399delAAAAAAAAGAAAA	STAM	ENSG00000136738.15	transcript	ENST00000377524.8	protein_coding	9/13		INFO_REALIGN_3_PRIME	chr10	TogoVar
STAP2_chr19_4319043_4343827	4332196	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03098.hp2 HG03098.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0168 a0001c0003t0002g0168	1	27	0.0370	-13	c.298 others(28): Show c.298-131_298-119delAAAAAAAAAAAAA	STAP2	ENSG00000178078.12	transcript	ENST00000594605.6	protein_coding	3/12			chr19	TogoVar
STAP2_chr19_4319043_4343827	4342023	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01515.hp2 HG03225.hp1 HG01515.hp2 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0001 a0001c0001t0001 a0001c0003t0001	a0001c0001t0001g0224 a0001c0003t0001g0235 a0001c0001t0001g0224 a0001c0003t0001g0235	2	120	0.0167	-13	c.-32 others(24): Show c.-3283_-3271delTTTTTTTTTTTTT	STAP2	ENSG00000178078.12	transcript	ENST00000594605.6	protein_coding		3197		chr19	TogoVar
STARD13_chr13_33098137_33290755	33177973	GAAGGAAG others(6): Show GAAGGAAGGAAGGA	G G	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG02257.hp2 HG02717.hp2 others(1): Show HG02109.hp1 HG02257.hp2 HG02717.hp2 HG03453.hp1	a0001 a0001	a0001c0002 a0001c0008 a0001c0011 others(1): Show a0001c0002 a0001c0008 a0001c0011 a0001c0013	a0001c0002t0002 a0001c0008t0002 a0001c0011t0001 others(1): Show a0001c0002t0002 a0001c0008t0002 a0001c0011t0001 a0001c0013t0001	a0001c0002t0002g0264 a0001c0008t0002g0160 a0001c0011t0001g0239 others(1): Show a0001c0002t0002g0264 a0001c0008t0002g0160 a0001c0011t0001g0239 a0001c0013t0001g0257	4	299	0.0134	-13	c.170 others(32): Show c.170-10364_170-10352delTCCTTCCTTCCTT	STARD13	ENSG00000133121.21	transcript	ENST00000336934.10	protein_coding	1/13			chr13	TogoVar
STARD13_chr13_33098137_33290755	33233868	GCAGCCGG others(6): Show GCAGCCGGAGCAGC	G G	intron_variant intron_variant	MODIFIER	NA18977.hp1 NA18994.hp2 NA19064.hp1 NA18977.hp1 NA18994.hp2 NA19064.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0003 a0002c0016 a0001c0001 a0002c0003 a0002c0016	a0001c0001t0002 a0002c0003t0003 a0002c0016t0003 a0001c0001t0002 a0002c0003t0003 a0002c0016t0003	a0001c0001t0002g0219 a0002c0003t0003g0196 a0002c0016t0003g0076 a0001c0001t0002g0219 a0002c0003t0003g0196 a0002c0016t0003g0076	3	300	0.0100	-13	c.169 others(32): Show c.169+51589_169+51601delGCTGCTCCGGCTG	STARD13	ENSG00000133121.21	transcript	ENST00000336934.10	protein_coding	1/13			chr13	TogoVar
STARD6_chr18_54319492_54362858	54322826	GAGAATCC others(6): Show GAGAATCCTTTTTC	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02071.hp2 HG02155.hp2 HG02523.hp1 others(2): Show HG02071.hp2 HG02155.hp2 HG02523.hp1 NA18989.hp1 NA19060.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0007 a0001c0001t0001g0157 a0001c0001t0001g0163 others(2): Show a0001c0001t0001g0007 a0001c0001t0001g0157 a0001c0001t0001g0163 a0001c0001t0001g0164 a0001c0001t0001g0169	5	348	0.0144	-13	c.18 others(24): Show c.1853_*1865delGAAAAAGGATTCT	STARD6	ENSG00000174448.9	transcript	ENST00000307844.4	protein_coding		1665		chr18	TogoVar
STARD9_chr15_42570606_42725998	42574020	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00639.hp2 HG00642.hp2 HG00733.hp2 others(23): Show HG00639.hp2 HG00642.hp2 HG00733.hp2 HG01074.hp2 HG01884.hp1 HG01891.hp2 HG02148.hp2 HG02602.hp2 HG02698.hp1 HG02723.hp2 HG02809.hp2 HG02818.hp1 HG02886.hp2 HG03098.hp1 HG03209.hp2 HG03453.hp1 HG03486.hp1 HG03516.hp2 HG03540.hp2 HG03654.hp1 HG03942.hp2 HG06807.hp1 NA18990.hp2 NA19240.hp2 NA20752.hp1 NA20805.hp2	a0001 a0002 a0003 others(9): Show a0001 a0002 a0003 a0006 a0009 a0017 a0018 a0029 a0032 a0033 a0039 a0042	a0001c0001 a0002c0002 a0002c0003 others(14): Show a0001c0001 a0002c0002 a0002c0003 a0002c0007 a0002c0015 a0002c0054 a0002c0057 a0003c0004 a0006c0026 a0009c0010 a0017c0017 a0018c0025 a0029c0049 a0032c0040 a0033c0048 a0039c0027 a0042c0051	a0001c0001t0001 a0002c0002t0004 a0002c0002t0005 others(15): Show a0001c0001t0001 a0002c0002t0004 a0002c0002t0005 a0002c0003t0003 a0002c0007t0004 a0002c0015t0005 a0002c0054t0005 a0002c0057t0004 a0003c0004t0002 a0006c0026t0002 a0009c0010t0002 a0017c0017t0002 a0018c0025t0004 a0029c0049t0004 a0032c0040t0001 a0033c0048t0004 a0039c0027t0004 a0042c0051t0005	a0001c0001t0001g0071 a0001c0001t0001g0074 a0001c0001t0001g0079 others(23): Show a0001c0001t0001g0071 a0001c0001t0001g0074 a0001c0001t0001g0079 a0002c0002t0004g0033 a0002c0002t0005g0067 a0002c0002t0005g0075 a0002c0003t0003g0026 a0002c0003t0003g0062 a0002c0007t0004g0065 a0002c0007t0004g0066 a0002c0007t0004g0082 a0002c0007t0004g0083 a0002c0015t0005g0073 a0002c0054t0005g0012 a0002c0057t0004g0063 a0003c0004t0002g0140 a0006c0026t0002g0080 a0009c0010t0002g0072 a0017c0017t0002g0050 a0018c0025t0004g0070 a0018c0025t0004g0077 a0029c0049t0004g0078 a0032c0040t0001g0069 a0033c0048t0004g0081 a0039c0027t0004g0068 a0042c0051t0005g0076	26	36	0.7222	-13	c.-16 others(24): Show c.-1695_-1683delAAAAAAAAAAAAA	STARD9	ENSG00000159433.12	transcript	ENST00000290607.12	protein_coding		1585		chr15	TogoVar
STARD9_chr15_42570606_42725998	42604626	ATTTTTTT others(6): Show ATTTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG03579.hp1 HG06807.hp2 HG03579.hp1 HG06807.hp2	a0009 a0009	a0009c0010 a0009c0010	a0009c0010t0002 a0009c0010t0011 a0009c0010t0002 a0009c0010t0011	a0009c0010t0002g0161 a0009c0010t0011g0162 a0009c0010t0002g0161 a0009c0010t0011g0162	2	73	0.0274	-13	c.234 others(32): Show c.234+19007_234+19019delTTTTTTTTTTTTT	STARD9	ENSG00000159433.12	transcript	ENST00000290607.12	protein_coding	3/32		INFO_REALIGN_3_PRIME	chr15	TogoVar
STAR_chr8_38137700_38155952	38151296	TAAAAAAA others(6): Show TAAAAAAAAAAAAA	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01257.hp1 HG02083.hp2 NA18956.hp2 others(5): Show HG01257.hp1 HG02083.hp2 NA18956.hp2 NA18965.hp1 NA18969.hp1 NA18986.hp2 NA19088.hp2 NA19091.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0003 a0001c0001t0003g0011 a0001c0001t0003g0027 others(1): Show a0001c0001t0003g0003 a0001c0001t0003g0011 a0001c0001t0003g0027 a0001c0001t0003g0063	8	151	0.0530	-13	c.-49 others(22): Show c.-491_-479delTTTTTTTTTTTTT	STAR	ENSG00000147465.12	transcript	ENST00000276449.9	protein_coding		345		chr8	TogoVar
STAR_chr8_38137700_38155952	38151664	ATAAATAA others(6): Show ATAAATAAATAAAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	434	0.0023	-13	c.-85 others(22): Show c.-859_-847delATTTATTTATTTA	STAR	ENSG00000147465.12	transcript	ENST00000276449.9	protein_coding		713		chr8	TogoVar
STAT1_chr2_190964149_191019171	190996265	GCAGTAAT others(6): Show GCAGTAATGACAGA	G G	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02922.hp2 HG06807.hp2 HG02486.hp2 HG02922.hp2 HG06807.hp2	a0001 a0001	a0001c0001 a0001c0008 a0001c0001 a0001c0008	a0001c0001t0002 a0001c0008t0001 a0001c0001t0002 a0001c0008t0001	a0001c0001t0002g0129 a0001c0001t0002g0308 a0001c0008t0001g0256 a0001c0001t0002g0129 a0001c0001t0002g0308 a0001c0008t0001g0256	3	412	0.0073	-13	c.786 others(30): Show c.786-1059_786-1047delTCTGTCATTACTG	STAT1	ENSG00000115415.21	transcript	ENST00000361099.8	protein_coding	9/24			chr2	TogoVar
STAT2_chr12_56336597_56365107	56340835	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18946.hp2 NA18946.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0003 a0003c0003t0003	a0003c0003t0003g0234 a0003c0003t0003g0234	1	132	0.0076	-13	c.25 others(24): Show c.2541_*2553delAAAAAAAAAAAAA	STAT2	ENSG00000170581.15	transcript	ENST00000314128.9	protein_coding		761		chr12	TogoVar
STAT3_chr17_42308324_42393442	42314851	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01168.hp2 HG01168.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0036 a0001c0001t0036	a0001c0001t0036g0143 a0001c0001t0036g0143	1	242	0.0041	-13	c.88 others(22): Show c.881_*893delAAAAAAAAAAAAA	STAT3	ENSG00000168610.17	transcript	ENST00000264657.10	protein_coding	24/24	881		chr17	TogoVar
STAT5A_chr17_42283498_42316943	42284433	ATTTTTGG others(6): Show ATTTTTGGATTTTT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18989.hp1 NA18989.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0056 a0001c0001t0001g0056	1	356	0.0028	-13	c.-41 others(24): Show c.-4175_-4163delTTTTTGGATTTTT	STAT5A	ENSG00000126561.18	transcript	ENST00000590949.6	protein_coding		4064		chr17	TogoVar
STAT5A_chr17_42283498_42316943	42302497	GTACAGAG others(6): Show GTACAGAGACATTA	G G	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01109.hp1 HG01167.hp1 others(49): Show HG00642.hp2 HG01109.hp1 HG01167.hp1 HG01169.hp1 HG01243.hp2 HG02109.hp1 HG02145.hp1 HG02257.hp2 HG02451.hp1 HG02451.hp2 HG02486.hp1 HG02559.hp2 HG02615.hp2 HG02622.hp2 HG02630.hp1 HG02630.hp2 HG02647.hp2 HG02723.hp2 HG02818.hp2 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp1 HG02965.hp1 HG02970.hp1 HG02970.hp2 HG03041.hp1 HG03130.hp1 HG03139.hp1 HG03209.hp2 HG03225.hp2 HG03453.hp2 HG03471.hp1 HG03471.hp2 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03579.hp2 HG03669.hp1 HG03669.hp2 HG03831.hp2 HG03942.hp1 HG04184.hp1 HG04204.hp1 HG06807.hp1 NA18522.hp1 NA19043.hp1 NA19043.hp2 NA20129.hp1 NA20300.hp2 NA21309.hp2	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0001c0002 a0002c0003 others(2): Show a0001c0001 a0001c0002 a0002c0003 a0002c0005 a0004c0008	a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 others(7): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 a0001c0001t0007 a0001c0001t0013 a0001c0001t0019 a0001c0002t0003 a0002c0003t0001 a0002c0005t0001 a0004c0008t0001	a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0047 others(36): Show a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0047 a0001c0001t0001g0051 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0168 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0173 a0001c0001t0003g0008 a0001c0001t0003g0031 a0001c0001t0003g0046 a0001c0001t0003g0070 a0001c0001t0003g0078 a0001c0001t0003g0090 a0001c0001t0003g0171 a0001c0001t0003g0172 a0001c0001t0003g0174 a0001c0001t0003g0187 a0001c0001t0006g0054 a0001c0001t0007g0167 a0001c0001t0013g0077 a0001c0001t0019g0046 a0001c0002t0003g0045 a0002c0003t0001g0025 a0002c0003t0001g0027 a0002c0003t0001g0049 a0002c0003t0001g0050 a0002c0003t0001g0055 a0002c0003t0001g0143 a0002c0003t0001g0175 a0002c0003t0001g0183 a0002c0003t0001g0184 a0002c0003t0001g0185 a0002c0005t0001g0025 a0002c0005t0001g0182 a0004c0008t0001g0043	52	356	0.1461	-13	c.116 others(32): Show c.1169+1045_1169+1057delACAGAGACATTAT	STAT5A	ENSG00000126561.18	transcript	ENST00000590949.6	protein_coding	9/18		INFO_REALIGN_3_PRIME	chr17	TogoVar
STAT5A_chr17_42283498_42316943	42314851	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01168.hp2 HG01169.hp2 HG01168.hp2 HG01169.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	2	299	0.0067	-13	c.41 others(24): Show c.4183_*4195delTTTTTTTTTTTTT	STAT5A	ENSG00000126561.18	transcript	ENST00000590949.6	protein_coding		2909		chr17	TogoVar
STAT6_chr12_57090408_57116362	57102965	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03669.hp2 HG03669.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0159 a0001c0001t0001g0159	1	25	0.0400	-13	c.121 others(28): Show c.1213-57_1213-45delAAAAAAAAAAAAA	STAT6	ENSG00000166888.12	transcript	ENST00000300134.8	protein_coding	11/21			chr12	TogoVar
STAU1_chr20_49108339_49193334	49108530	ACACACCC others(6): Show ACACACCCCCCCCC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG04228.hp2 HG04228.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0012 a0001c0001t0003g0012	1	355	0.0028	-13	c.63 others(24): Show c.6335_*6347delGGGGGGGGGTGTG	STAU1	ENSG00000124214.21	transcript	ENST00000371856.7	protein_coding		4808		chr20	TogoVar
STAU1_chr20_49108339_49193334	49153710	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00673.hp1 HG00738.hp2 HG01934.hp2 others(31): Show HG00673.hp1 HG00738.hp2 HG01934.hp2 HG01975.hp2 HG02074.hp2 HG02148.hp2 HG02155.hp2 HG03239.hp2 HG03834.hp1 HG04115.hp2 HG04228.hp2 NA18952.hp2 NA18953.hp1 NA18954.hp2 NA18959.hp2 NA18960.hp1 NA18961.hp1 NA18966.hp1 NA18969.hp2 NA18972.hp1 NA18988.hp2 NA18993.hp2 NA18998.hp1 NA19000.hp2 NA19002.hp1 NA19012.hp2 NA19054.hp2 NA19060.hp2 NA19065.hp2 NA19068.hp1 NA19080.hp1 NA19082.hp2 NA19083.hp1 NA19090.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0006 a0001c0001 a0001c0004 a0001c0006	a0001c0001t0003 a0001c0001t0004 a0001c0004t0001 others(1): Show a0001c0001t0003 a0001c0001t0004 a0001c0004t0001 a0001c0006t0003	a0001c0001t0003g0001 a0001c0001t0003g0007 a0001c0001t0003g0008 others(28): Show a0001c0001t0003g0001 a0001c0001t0003g0007 a0001c0001t0003g0008 a0001c0001t0003g0009 a0001c0001t0003g0010 a0001c0001t0003g0011 a0001c0001t0003g0012 a0001c0001t0003g0013 a0001c0001t0003g0015 a0001c0001t0003g0016 a0001c0001t0003g0017 a0001c0001t0003g0018 a0001c0001t0003g0019 a0001c0001t0003g0020 a0001c0001t0003g0021 a0001c0001t0003g0022 a0001c0001t0003g0023 a0001c0001t0003g0024 a0001c0001t0003g0026 a0001c0001t0003g0027 a0001c0001t0003g0028 a0001c0001t0003g0030 a0001c0001t0003g0031 a0001c0001t0003g0032 a0001c0001t0003g0033 a0001c0001t0003g0034 a0001c0001t0003g0035 a0001c0001t0003g0085 a0001c0001t0004g0014 a0001c0004t0001g0192 a0001c0006t0003g0025	34	71	0.4789	-13	c.344 others(28): Show c.344+210_344+222delTTTTTTTTTTTTT	STAU1	ENSG00000124214.21	transcript	ENST00000371856.7	protein_coding	4/13			chr20	TogoVar
STAU1_chr20_49108339_49193334	49163419	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00639.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0048 a0001c0001t0003g0048	1	127	0.0079	-13	c.205 others(30): Show c.205+2565_205+2577delAAAAAAAAAAAAA	STAU1	ENSG00000124214.21	transcript	ENST00000371856.7	protein_coding	3/13			chr20	TogoVar
STAU1_chr20_49108339_49193334	49189201	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00738.hp1 HG01175.hp1 HG01243.hp1 others(7): Show HG00738.hp1 HG01175.hp1 HG01243.hp1 HG01433.hp2 HG02280.hp2 HG02293.hp2 HG03831.hp1 NA18940.hp1 NA19000.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0004 a0001c0001t0001 a0001c0001t0004	a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 others(7): Show a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0164 a0001c0001t0001g0166 a0001c0001t0001g0170 a0001c0001t0001g0181 a0001c0001t0001g0205 a0001c0001t0001g0211 a0001c0001t0004g0111	10	74	0.1351	-13	c.-12 others(24): Show c.-1258_-1246delTTTTTTTTTTTTT	STAU1	ENSG00000124214.21	transcript	ENST00000371856.7	protein_coding		868		chr20	TogoVar
STAU2_chr8_73415369_73751840	73429413	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03942.hp1 HG03942.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0189 a0001c0001t0001g0189	1	52	0.0192	-13	c.153 others(32): Show c.1531-6724_1531-6712delAAAAAAAAAAAAA	STAU2	ENSG00000040341.18	transcript	ENST00000524300.6	protein_coding	13/14			chr8	TogoVar
STAU2_chr8_73415369_73751840	73523196	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02132.hp1 HG02132.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0199 a0001c0001t0001g0199	1	96	0.0104	-13	c.153 others(34): Show c.1530+28803_1530+28815delTTTTTTTTTTTTT	STAU2	ENSG00000040341.18	transcript	ENST00000524300.6	protein_coding	13/14			chr8	TogoVar
STAU2_chr8_73415369_73751840	73546123	CTTTTTTT others(6): Show CTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02818.hp1 NA18522.hp1 NA19043.hp1 HG02818.hp1 NA18522.hp1 NA19043.hp1	a0001 a0001	a0001c0001 a0001c0006 a0001c0001 a0001c0006	a0001c0001t0001 a0001c0006t0001 a0001c0001t0001 a0001c0006t0001	a0001c0001t0001g0046 a0001c0006t0001g0049 a0001c0006t0001g0050 a0001c0001t0001g0046 a0001c0006t0001g0049 a0001c0006t0001g0050	3	71	0.0423	-13	c.153 others(32): Show c.1530+5876_1530+5888delAAAAAAAAAAAAA	STAU2	ENSG00000040341.18	transcript	ENST00000524300.6	protein_coding	13/14			chr8	TogoVar
STAU2_chr8_73415369_73751840	73597669	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02965.hp2 HG03041.hp2 HG01884.hp2 HG02965.hp2 HG03041.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0100 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0100	3	50	0.0600	-13	c.103 others(32): Show c.1030-2385_1030-2373delTTTTTTTTTTTTT	STAU2	ENSG00000040341.18	transcript	ENST00000524300.6	protein_coding	10/14			chr8	TogoVar
STAU2_chr8_73415369_73751840	73637463	TAAAGTGC others(6): Show TAAAGTGCTGAAAG	T T	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02572.hp1 HG01891.hp2 HG02572.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0003t0001 a0001c0001t0001 a0001c0003t0001	a0001c0001t0001g0003 a0001c0003t0001g0004 a0001c0001t0001g0003 a0001c0003t0001g0004	2	238	0.0084	-13	c.411 others(32): Show c.411-20025_411-20013delCTTTCAGCACTTT	STAU2	ENSG00000040341.18	transcript	ENST00000524300.6	protein_coding	6/14			chr8	TogoVar
STAU2_chr8_73415369_73751840	73637464	AAAGTGCT others(6): Show AAAGTGCTGAAAGT	A A	intron_variant intron_variant	MODIFIER	HG01243.hp2 HG02886.hp1 HG01243.hp2 HG02886.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0069 a0001c0001t0001g0002 a0001c0001t0001g0069	2	238	0.0084	-13	c.411 others(32): Show c.411-20026_411-20014delACTTTCAGCACTT	STAU2	ENSG00000040341.18	transcript	ENST00000524300.6	protein_coding	6/14			chr8	TogoVar
STEAP2_chr7_90206740_90242683	90208376	AGGGAGGG others(6): Show AGGGAGGGAGGGAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01175.hp2 HG01175.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0015 a0001c0001t0004g0015	1	315	0.0032	-13	c.-38 others(24): Show c.-3815_-3803delGGGAGGGAGGGAG	STEAP2	ENSG00000157214.14	transcript	ENST00000394621.7	protein_coding		3363		chr7	TogoVar
STEAP3_chr2_119218834_119270652	119244238	ATTATTAT others(6): Show ATTATTATTATTAT	A A	intron_variant intron_variant	MODIFIER	NA19003.hp1 NA19003.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0053 a0001c0001t0001g0053	1	346	0.0029	-13	c.23- others(28): Show c.23-1249_23-1237delTATTATTATTATT	STEAP3	ENSG00000115107.20	transcript	ENST00000393110.7	protein_coding	2/5		INFO_REALIGN_3_PRIME	chr2	TogoVar
STEEP1_chrX_119533149_119570409	119563548	CAAAAAAA others(6): Show CAAAAAAAAAAAGA	C C	intron_variant intron_variant	MODIFIER	NA18974.hp1 NA18974.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0134 a0001c0001t0001g0134	1	288	0.0035	-13	c.124 others(30): Show c.124+1671_124+1683delTCTTTTTTTTTTT	STEEP1	ENSG00000018610.15	transcript	ENST00000644802.2	protein_coding	1/6			chrX	TogoVar
STH_chr17_45994250_46004694	46001813	GAAACAGG others(6): Show GAAACAGGGCCAGT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	NA18999.hp2 NA18999.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0000 a0001c0001t0001g0000	1	418	0.0024	-13	c.21 others(24): Show c.2148_*2160delAAACAGGGCCAGT	STH	ENSG00000256762.1	transcript	ENST00000537309.1	protein_coding		2120		chr17	TogoVar
STIL_chr1_47245139_47319147	47252778	TACACACA others(6): Show TACACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG01975.hp2 HG01975.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0206 a0001c0003t0001g0206	1	80	0.0125	-13	c.308 others(30): Show c.3081-869_3081-857delTGTGTGTGTGTGT	STIL	ENSG00000123473.17	transcript	ENST00000371877.8	protein_coding	16/16			chr1	TogoVar
STIM1_chr11_3850664_4098208	3886687	CAAAAAAA others(6): Show CAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02809.hp1 HG02809.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0222 a0001c0001t0003g0222	1	117	0.0085	-13	c.139 others(32): Show c.139+30290_139+30302delAAAAAAAAAAAAA	STIM1	ENSG00000167323.13	transcript	ENST00000526596.2	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr11	TogoVar
STIM1_chr11_3850664_4098208	3901571	CTAAGTGT others(6): Show CTAAGTGTTTAACA	C C	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0243 a0001c0001t0003g0243	1	298	0.0034	-13	c.139 others(32): Show c.139+45165_139+45177delAGTGTTTAACATA	STIM1	ENSG00000167323.13	transcript	ENST00000526596.2	protein_coding	1/12		INFO_REALIGN_3_PRIME	chr11	TogoVar
STIM1_chr11_3850664_4098208	3992081	GTTTTTTT others(6): Show GTTTTTTTGTTTTT	G G	intron_variant intron_variant	MODIFIER	HG06807.hp1 HG06807.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0046 a0001c0001t0002g0046	1	211	0.0047	-13	c.270 others(32): Show c.270+24407_270+24419delGTTTTTTTTTTTT	STIM1	ENSG00000167323.13	transcript	ENST00000526596.2	protein_coding	2/12		INFO_REALIGN_3_PRIME	chr11	TogoVar

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