view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VPS13A_chr9_77172534_77426537 | 77399181 | TAAAAAAA others(7): Show |
T | intron_variant | MODIFIER | HG00673.hp2 | a0001 | a0001c0001 | a0001c0001t0008 | a0001c0001t0008g0080 | 1 | 321 | 0.0031 | -14 | c.919 others(33): Show |
VPS13A | ENSG00000197969.14 | transcript | ENST00000360280.8 | protein_coding | 68/71 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
VPS13A_chr9_77172534_77426537 | 77401329 | TTGTGTGT others(7): Show |
T | intron_variant | MODIFIER | HG03017.hp2 | a0008 | a0008c0017 | a0008c0017t0001 | a0008c0017t0001g0330 | 1 | 57 | 0.0175 | -14 | c.919 others(33): Show |
VPS13A | ENSG00000197969.14 | transcript | ENST00000360280.8 | protein_coding | 68/71 | INFO_REALIGN_3_PRIME | chr9 | TogoVar | ||||||
VPS13A_chr9_77172534_77426537 | 77422811 | GTGTGTGC others(7): Show |
G | downstream_gene_variant | MODIFIER | HG02630.hp2 HG02895.hp2 HG03225.hp2 others(3): Show |
a0004a0023 | a0004c0009a0023c0043 | a0004c0009t0011a0023c0043t0011 | a0004c0009t0011g0147 a0004c0009t0011g0174 a0004c0009t0011g0179 others(3): Show |
6 | 346 | 0.0173 | -14 | c.*68 others(25): Show |
VPS13A | ENSG00000197969.14 | transcript | ENST00000360280.8 | protein_coding | 1275 | chr9 | TogoVar | |||||||
VPS13B_chr8_99008274_99882580 | 99354266 | CTTTTTTT others(7): Show |
C | intron_variant | MODIFIER | HG00408.hp1 | a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0077 | 1 | 24 | 0.0417 | -14 | c.282 others(35): Show |
VPS13B | ENSG00000132549.20 | transcript | ENST00000357162.7 | protein_coding | 19/61 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
VPS13B_chr8_99008274_99882580 | 99360176 | TTCTTTCT others(7): Show |
T | intron_variant | MODIFIER | HG01106.hp2 HG02165.hp1 NA18991.hp1 |
a0001a0002 | a0001c0002a0002c0003 | a0001c0002t0001a0002c0003t0003 | a0001c0002t0001g0020 a0001c0002t0001g0030 a0002c0003t0003g0036 |
3 | 131 | 0.0229 | -14 | c.282 others(35): Show |
VPS13B | ENSG00000132549.20 | transcript | ENST00000357162.7 | protein_coding | 19/61 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
VPS13B_chr8_99008274_99882580 | 99360180 | TTCTTTCT others(7): Show |
T | intron_variant | MODIFIER | HG03041.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0061 | 1 | 123 | 0.0081 | -14 | c.282 others(35): Show |
VPS13B | ENSG00000132549.20 | transcript | ENST00000357162.7 | protein_coding | 19/61 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
VPS13B_chr8_99008274_99882580 | 99360202 | CTCTCTCT others(7): Show |
C | intron_variant | MODIFIER | NA18906.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0107 | 1 | 131 | 0.0076 | -14 | c.282 others(35): Show |
VPS13B | ENSG00000132549.20 | transcript | ENST00000357162.7 | protein_coding | 19/61 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
VPS13B_chr8_99008274_99882580 | 99360206 | CTCTCTTT others(7): Show |
C | intron_variant | MODIFIER | HG01256.hp1 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0052 | 1 | 129 | 0.0078 | -14 | c.282 others(35): Show |
VPS13B | ENSG00000132549.20 | transcript | ENST00000357162.7 | protein_coding | 19/61 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
VPS13B_chr8_99008274_99882580 | 99540013 | TTATATAT others(7): Show |
T | intron_variant | MODIFIER | HG01515.hp1 HG01517.hp2 HG01978.hp1 |
a0001a0002 | a0001c0002a0002c0003 | a0001c0002t0002a0001c0002t0009a0002c0003t0003 | a0001c0002t0002g0046 a0001c0002t0009g0045 a0002c0003t0003g0101 |
3 | 123 | 0.0244 | -14 | c.474 others(35): Show |
VPS13B | ENSG00000132549.20 | transcript | ENST00000357162.7 | protein_coding | 30/61 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
VPS13B_chr8_99008274_99882580 | 99540053 | ATATATAT others(7): Show |
A | intron_variant | MODIFIER | HG01261.hp1 HG02074.hp1 |
a0001 | a0001c0002a0001c0035 | a0001c0002t0001a0001c0035t0002 | a0001c0002t0001g0079 a0001c0035t0002g0104 |
2 | 129 | 0.0155 | -14 | c.474 others(35): Show |
VPS13B | ENSG00000132549.20 | transcript | ENST00000357162.7 | protein_coding | 30/61 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
VPS13B_chr8_99008274_99882580 | 99640049 | GAGAAAAG others(7): Show |
G | intron_variant | MODIFIER | NA18522.hp1 | a0001 | a0001c0021 | a0001c0021t0001 | a0001c0021t0001g0121 | 1 | 70 | 0.0143 | -14 | c.522 others(33): Show |
VPS13B | ENSG00000132549.20 | transcript | ENST00000357162.7 | protein_coding | 33/61 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
VPS13B_chr8_99008274_99882580 | 99670246 | GTAGAAAA others(7): Show |
G | intron_variant | MODIFIER | HG00140.hp1 HG00323.hp2 HG00408.hp2 others(41): Show |
a0001a0002a0005others(4): Show | a0001c0001a0001c0002a0001c0008others(8): Show | a0001c0001t0002a0001c0002t0001a0001c0002t0002others(11): Show | a0001c0001t0002g0021 a0001c0001t0002g0026 a0001c0001t0002g0027 others(41): Show |
44 | 132 | 0.3333 | -14 | c.604 others(33): Show |
VPS13B | ENSG00000132549.20 | transcript | ENST00000357162.7 | protein_coding | 35/61 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
VPS13B_chr8_99008274_99882580 | 99821103 | AACACACA others(7): Show |
A | intron_variant | MODIFIER | HG03041.hp2 NA20129.hp1 |
a0003 | a0003c0004 | a0003c0004t0001 | a0003c0004t0001g0065 a0003c0004t0001g0066 |
2 | 16 | 0.1250 | -14 | c.899 others(31): Show |
VPS13B | ENSG00000132549.20 | transcript | ENST00000357162.7 | protein_coding | 49/61 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
VPS13B_chr8_99008274_99882580 | 99828392 | CCGTTTTT others(7): Show |
C | intron_variant | MODIFIER | HG00140.hp1 HG00323.hp1 HG00408.hp1 others(46): Show |
a0001a0002a0006others(6): Show | a0001c0002a0001c0016a0002c0003others(8): Show | a0001c0002t0001a0001c0002t0002a0001c0002t0009others(11): Show | a0001c0002t0001g0002 a0001c0002t0001g0003 a0001c0002t0001g0004 others(46): Show |
49 | 95 | 0.5158 | -14 | c.933 others(33): Show |
VPS13B | ENSG00000132549.20 | transcript | ENST00000357162.7 | protein_coding | 51/61 | chr8 | TogoVar | |||||||
VPS13B_chr8_99008274_99882580 | 99854825 | CTGCACTG others(7): Show |
C | intron_variant | MODIFIER | HG02145.hp2 | a0003 | a0003c0004 | a0003c0004t0001 | a0003c0004t0001g0112 | 1 | 132 | 0.0076 | -14 | c.108 others(33): Show |
VPS13B | ENSG00000132549.20 | transcript | ENST00000357162.7 | protein_coding | 56/61 | chr8 | TogoVar | |||||||
VPS13C_chr15_61847389_62065447 | 61961394 | AACACACA others(7): Show |
A | intron_variant | MODIFIER | HG00323.hp1 HG01884.hp2 HG02486.hp2 others(1): Show |
a0001a0013a0023 | a0001c0001a0013c0016a0023c0026 | a0001c0001t0002a0013c0016t0010a0023c0026t0027 | a0001c0001t0002g0244 a0013c0016t0010g0010 a0013c0016t0010g0011 others(1): Show |
4 | 101 | 0.0396 | -14 | c.390 others(31): Show |
VPS13C | ENSG00000129003.19 | transcript | ENST00000644861.2 | protein_coding | 35/84 | chr15 | TogoVar | |||||||
VPS13C_chr15_61847389_62065447 | 61980183 | CAAAAAAA others(7): Show |
C | intron_variant | MODIFIER | HG01257.hp1 | a0009 | a0009c0010 | a0009c0010t0001 | a0009c0010t0001g0157 | 1 | 113 | 0.0088 | -14 | c.216 others(33): Show |
VPS13C | ENSG00000129003.19 | transcript | ENST00000644861.2 | protein_coding | 22/84 | chr15 | TogoVar | |||||||
VPS13D_chr1_12225030_12517047 | 12260015 | CTTTTTTT others(7): Show |
C | intron_variant | MODIFIER | HG01106.hp1 HG03017.hp1 HG03098.hp2 others(1): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0002a0001c0001t0015a0001c0002t0004others(1): Show | a0001c0001t0002g0042 a0001c0001t0015g0069 a0001c0002t0004g0047 others(1): Show |
4 | 19 | 0.2105 | -14 | c.111 others(31): Show |
VPS13D | ENSG00000048707.15 | transcript | ENST00000620676.6 | protein_coding | 10/69 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
VPS13D_chr1_12225030_12517047 | 12353675 | GAATATCG others(7): Show |
G | intron_variant | MODIFIER | HG03540.hp2 | a0001 | a0001c0021 | a0001c0021t0013 | a0001c0021t0013g0046 | 1 | 152 | 0.0066 | -14 | c.943 others(31): Show |
VPS13D | ENSG00000048707.15 | transcript | ENST00000620676.6 | protein_coding | 46/69 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
VPS13D_chr1_12225030_12517047 | 12381968 | TTCTTTCT others(7): Show |
T | intron_variant | MODIFIER | HG01943.hp2 HG02273.hp2 HG02300.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0106 a0001c0001t0001g0112 a0001c0001t0001g0113 |
3 | 152 | 0.0197 | -14 | c.111 others(34): Show |
VPS13D | ENSG00000048707.15 | transcript | ENST00000620676.6 | protein_coding | 57/69 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
VPS18_chr15_40889450_40908975 | 40899044 | TGCCTGGG others(7): Show |
T | intron_variant | MODIFIER | HG02074.hp2 HG03669.hp2 HG04204.hp1 |
a0001 | a0001c0003 | a0001c0003t0002 | a0001c0003t0002g0039 a0001c0003t0002g0090 |
3 | 404 | 0.0074 | -14 | c.325 others(27): Show |
VPS18 | ENSG00000104142.11 | transcript | ENST00000220509.10 | protein_coding | 3/4 | INFO_REALIGN_3_PRIME | chr15 | TogoVar | ||||||
VPS26A_chr10_69119178_69179412 | 69119337 | TATATATA others(7): Show |
T | upstream_gene_variant | MODIFIER | NA18950.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0178 | 1 | 334 | 0.0030 | -14 | c.-49 others(25): Show |
VPS26A | ENSG00000122958.15 | transcript | ENST00000263559.11 | protein_coding | 4840 | chr10 | TogoVar | |||||||
VPS26A_chr10_69119178_69179412 | 69160127 | TACACACA others(7): Show |
T | intron_variant | MODIFIER | HG01346.hp1 NA18952.hp1 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004 | a0001c0001t0001g0234 a0001c0001t0004g0255 |
2 | 52 | 0.0385 | -14 | c.551 others(31): Show |
VPS26A | ENSG00000122958.15 | transcript | ENST00000263559.11 | protein_coding | 5/8 | INFO_REALIGN_3_PRIME | chr10 | TogoVar | ||||||
VPS26C_chr21_37218422_37272334 | 37235851 | GTATATAT others(7): Show |
G | intron_variant | MODIFIER | NA19005.hp1 NA19054.hp2 NA19072.hp2 |
a0001 | a0001c0001 | a0001c0001t0004 | a0001c0001t0004g0035 a0001c0001t0004g0225 |
3 | 240 | 0.0125 | -14 | c.352 others(31): Show |
VPS26C | ENSG00000157538.14 | transcript | ENST00000309117.11 | protein_coding | 3/7 | chr21 | TogoVar | |||||||
VPS33A_chr12_122224564_122271494 | 122239749 | CAAAAAAA others(7): Show |
C | intron_variant | MODIFIER | HG01099.hp2 HG01106.hp2 HG01169.hp2 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0226 a0001c0001t0001g0243 a0001c0001t0002g0013 others(3): Show |
7 | 53 | 0.1321 | -14 | c.116 others(31): Show |
VPS33A | ENSG00000139719.11 | transcript | ENST00000267199.9 | protein_coding | 9/12 | chr12 | TogoVar | |||||||
VPS33B_chr15_90993673_91027594 | 91017367 | AATATATA others(7): Show |
A | intron_variant | MODIFIER | HG00140.hp2 HG00423.hp1 HG00423.hp2 others(77): Show |
a0001a0006 | a0001c0001a0001c0010a0001c0017others(2): Show | a0001c0001t0001a0001c0001t0003a0001c0010t0001others(3): Show | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0018 others(52): Show |
80 | 207 | 0.3865 | -14 | c.178 others(29): Show |
VPS33B | ENSG00000184056.15 | transcript | ENST00000333371.8 | protein_coding | 2/22 | chr15 | TogoVar | |||||||
VPS33B_chr15_90993673_91027594 | 91022836 | CAAAAAAA others(7): Show |
C | upstream_gene_variant | MODIFIER | HG02258.hp2 HG02622.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0137 a0001c0001t0001g0138 |
2 | 54 | 0.0370 | -14 | c.-60 others(23): Show |
VPS33B | ENSG00000184056.15 | transcript | ENST00000333371.8 | protein_coding | 243 | chr15 | TogoVar | |||||||
VPS35L_chr16_19550703_19706163 | 19570834 | CATATATA others(7): Show |
C | intron_variant | MODIFIER | HG00423.hp2 HG00733.hp1 HG00735.hp2 others(7): Show |
a0001a0004 | a0001c0001a0001c0002a0004c0015 | a0001c0001t0001a0001c0002t0001a0004c0015t0001 | a0001c0001t0001g0044 a0001c0001t0001g0242 a0001c0001t0001g0273 others(7): Show |
10 | 28 | 0.3571 | -14 | c.285 others(31): Show |
VPS35L | ENSG00000103544.17 | transcript | ENST00000417362.7 | protein_coding | 3/30 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
VPS35L_chr16_19550703_19706163 | 19674184 | CTTTTTTT others(7): Show |
C | intron_variant | MODIFIER | HG02145.hp1 HG02622.hp2 HG03516.hp2 |
a0001 | a0001c0001a0001c0011 | a0001c0001t0001a0001c0001t0003a0001c0011t0007 | a0001c0001t0001g0185 a0001c0001t0003g0275 a0001c0011t0007g0276 |
3 | 152 | 0.0197 | -14 | c.236 others(33): Show |
VPS35L | ENSG00000103544.17 | transcript | ENST00000417362.7 | protein_coding | 27/30 | INFO_REALIGN_3_PRIME | chr16 | TogoVar | ||||||
VPS37B_chr12_122860330_122901124 | 122899050 | AACACACA others(7): Show |
A | upstream_gene_variant | MODIFIER | HG00280.hp1 HG00323.hp1 HG00323.hp2 others(132): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(8): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(102): Show |
135 | 141 | 0.9574 | -14 | c.-30 others(25): Show |
VPS37B | ENSG00000139722.7 | transcript | ENST00000267202.7 | protein_coding | 2927 | chr12 | TogoVar | |||||||
VPS37D_chr7_73662831_73677110 | 73665234 | CAAAAAAA others(7): Show |
C | upstream_gene_variant | MODIFIER | HG02683.hp2 | a0001 | a0001c0001 | a0001c0001t0002 | a0001c0001t0002g0002 | 1 | 37 | 0.0270 | -14 | c.-27 others(25): Show |
VPS37D | ENSG00000176428.6 | transcript | ENST00000324941.5 | protein_coding | 2596 | chr7 | TogoVar | |||||||
VPS37D_chr7_73662831_73677110 | 73668176 | CGGGCCGG others(7): Show |
C | intron_variant | MODIFIER | HG02698.hp2 HG04184.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0009 | 2 | 378 | 0.0053 | -14 | c.138 others(27): Show |
VPS37D | ENSG00000176428.6 | transcript | ENST00000324941.5 | protein_coding | 1/3 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
VPS41_chr7_38717974_38914191 | 38720558 | GTGTGTAT others(7): Show |
G | downstream_gene_variant | MODIFIER | HG00423.hp1 HG02056.hp2 HG02300.hp1 others(3): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0005a0001c0001t0027others(1): Show | a0001c0001t0001g0001 a0001c0001t0005g0041 a0001c0001t0005g0052 others(3): Show |
6 | 221 | 0.0271 | -14 | c.*56 others(25): Show |
VPS41 | ENSG00000006715.16 | transcript | ENST00000310301.9 | protein_coding | 2415 | chr7 | TogoVar | |||||||
VPS41_chr7_38717974_38914191 | 38720562 | GTATATAT others(7): Show |
G | downstream_gene_variant | MODIFIER | HG01106.hp1 HG01109.hp1 HG02647.hp1 others(4): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0009a0001c0001t0014a0001c0003t0011 | a0001c0001t0009g0021 a0001c0001t0009g0179 a0001c0001t0014g0051 others(4): Show |
7 | 178 | 0.0393 | -14 | c.*56 others(25): Show |
VPS41 | ENSG00000006715.16 | transcript | ENST00000310301.9 | protein_coding | 2411 | chr7 | TogoVar | |||||||
VPS41_chr7_38717974_38914191 | 38853622 | TGAACCCC others(7): Show |
T | intron_variant | MODIFIER | HG00099.hp1 HG00438.hp2 HG00558.hp2 others(93): Show |
a0001a0002a0005 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(33): Show | a0001c0001t0002g0215 a0001c0001t0003g0057 a0001c0001t0003g0058 others(91): Show |
96 | 276 | 0.3478 | -14 | c.246 others(31): Show |
VPS41 | ENSG00000006715.16 | transcript | ENST00000310301.9 | protein_coding | 4/28 | chr7 | TogoVar | |||||||
VPS41_chr7_38717974_38914191 | 38860697 | TTGTGTGT others(7): Show |
T | intron_variant | MODIFIER | HG02922.hp1 | a0001 | a0001c0005 | a0001c0005t0031 | a0001c0005t0031g0098 | 1 | 18 | 0.0556 | -14 | c.246 others(31): Show |
VPS41 | ENSG00000006715.16 | transcript | ENST00000310301.9 | protein_coding | 4/28 | chr7 | TogoVar | |||||||
VPS45_chr1_150062776_150150329 | 150140386 | GGTGTGTG others(7): Show |
G | intron_variant | MODIFIER | HG02630.hp2 HG02723.hp2 HG02809.hp1 others(4): Show |
a0002 | a0002c0002 | a0002c0002t0001 | a0002c0002t0001g0006 a0002c0002t0001g0007 a0002c0002t0001g0008 others(4): Show |
7 | 54 | 0.1296 | -14 | c.162 others(33): Show |
VPS45 | ENSG00000136631.16 | transcript | ENST00000644510.2 | protein_coding | 14/14 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
VPS4A_chr16_69306350_69331939 | 69310070 | GTTTTTTT others(7): Show |
G | upstream_gene_variant | MODIFIER | HG01109.hp2 HG01168.hp1 HG01169.hp1 others(22): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0002a0001c0002t0006others(5): Show | a0001c0001t0001g0048 a0001c0001t0001g0180 a0001c0001t0001g0182 others(21): Show |
25 | 58 | 0.4310 | -14 | c.-14 others(25): Show |
VPS4A | ENSG00000132612.16 | transcript | ENST00000254950.13 | protein_coding | 1279 | chr16 | TogoVar | |||||||
VPS50_chr7_93227366_93366123 | 93252350 | GTTTAGGT others(7): Show |
G | intron_variant | MODIFIER | HG02451.hp1 | a0001 | a0001c0002 | a0001c0002t0004 | a0001c0002t0004g0268 | 1 | 314 | 0.0032 | -14 | c.103 others(29): Show |
VPS50 | ENSG00000004766.17 | transcript | ENST00000305866.10 | protein_coding | 2/27 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | ||||||
VPS51_chr11_65091214_65116862 | 65113245 | CCTGTTGG others(7): Show |
C | downstream_gene_variant | MODIFIER | NA19075.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0057 | 1 | 348 | 0.0029 | -14 | c.*16 others(25): Show |
VPS51 | ENSG00000149823.10 | transcript | ENST00000279281.8 | protein_coding | 1384 | chr11 | TogoVar | |||||||
VPS52_chr6_33245278_33276876 | 33245913 | TCACACAC others(7): Show |
T | downstream_gene_variant | MODIFIER | NA18948.hp1 NA19066.hp1 |
a0001 | a0001c0006 | a0001c0006t0003 | a0001c0006t0003g0227 a0001c0006t0003g0228 |
2 | 98 | 0.0204 | -14 | c.*49 others(25): Show |
VPS52 | ENSG00000223501.9 | transcript | ENST00000445902.3 | protein_coding | 4364 | chr6 | TogoVar | |||||||
VPS52_chr6_33245278_33276876 | 33256463 | CAAAAAAA others(7): Show |
C | intron_variant | MODIFIER | HG01123.hp2 HG02622.hp2 HG02970.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0009 a0001c0001t0001g0032 |
6 | 48 | 0.1250 | -14 | c.179 others(33): Show |
VPS52 | ENSG00000223501.9 | transcript | ENST00000445902.3 | protein_coding | 17/19 | chr6 | TogoVar | |||||||
VPS52_chr6_33245278_33276876 | 33270950 | CAAAAAAA others(7): Show |
C | intron_variant | MODIFIER | HG00099.hp1 HG00642.hp1 HG01168.hp1 others(29): Show |
a0001a0002 | a0001c0001a0002c0010 | a0001c0001t0002a0002c0010t0002 | a0001c0001t0002g0018 a0001c0001t0002g0019 a0001c0001t0002g0020 others(26): Show |
32 | 140 | 0.2286 | -14 | c.90+ others(27): Show |
VPS52 | ENSG00000223501.9 | transcript | ENST00000445902.3 | protein_coding | 1/19 | chr6 | TogoVar | |||||||
VPS53_chr17_503668_719839 | 524283 | CATAAAAA others(7): Show |
C | intron_variant | MODIFIER | HG02572.hp1 HG03516.hp2 |
a0001 | a0001c0002a0001c0014 | a0001c0002t0075a0001c0014t0128 | a0001c0002t0075g0041 a0001c0014t0128g0166 |
2 | 230 | 0.0087 | -14 | c.208 others(33): Show |
VPS53 | ENSG00000141252.21 | transcript | ENST00000437048.7 | protein_coding | 19/21 | chr17 | TogoVar | |||||||
VPS53_chr17_503668_719839 | 545897 | CAAAACAG others(7): Show |
C | intron_variant | MODIFIER | NA18978.hp2 | a0007 | a0007c0012 | a0007c0012t0122 | a0007c0012t0122g0140 | 1 | 230 | 0.0043 | -14 | c.186 others(33): Show |
VPS53 | ENSG00000141252.21 | transcript | ENST00000437048.7 | protein_coding | 17/21 | chr17 | TogoVar | |||||||
VPS53_chr17_503668_719839 | 610127 | TCACACAC others(7): Show |
T | intron_variant | MODIFIER | HG00438.hp1 HG00741.hp2 HG01257.hp2 others(20): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0007others(1): Show | a0001c0001t0070a0001c0001t0110a0001c0001t0116others(9): Show | a0001c0001t0070g0012 a0001c0001t0110g0122 a0001c0001t0116g0211 others(20): Show |
23 | 25 | 0.9200 | -14 | c.111 others(33): Show |
VPS53 | ENSG00000141252.21 | transcript | ENST00000437048.7 | protein_coding | 11/21 | chr17 | TogoVar | |||||||
VPS53_chr17_503668_719839 | 629809 | CCACACAC others(7): Show |
C | intron_variant | MODIFIER | HG00323.hp2 HG00423.hp1 HG00438.hp2 others(32): Show |
a0002a0004a0005 | a0002c0003a0004c0008a0005c0009 | a0002c0003t0008a0002c0003t0009a0002c0003t0018others(23): Show | a0002c0003t0008g0180 a0002c0003t0008g0182 a0002c0003t0008g0183 others(32): Show |
35 | 44 | 0.7955 | -14 | c.688 others(31): Show |
VPS53 | ENSG00000141252.21 | transcript | ENST00000437048.7 | protein_coding | 8/21 | chr17 | TogoVar | |||||||
VPS8_chr3_184807166_185057604 | 184962724 | AGTGTGTG others(7): Show |
A | intron_variant | MODIFIER | HG02622.hp2 HG02630.hp2 HG03486.hp1 |
a0004 | a0004c0006 | a0004c0006t0003 | a0004c0006t0003g0050 a0004c0006t0003g0051 a0004c0006t0003g0053 |
3 | 15 | 0.2000 | -14 | c.318 others(33): Show |
VPS8 | ENSG00000156931.16 | transcript | ENST00000625842.3 | protein_coding | 37/47 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
VRK2_chr2_58041806_58164871 | 58107492 | CTTCCTAG others(7): Show |
C | intron_variant | MODIFIER | HG02109.hp2 HG02970.hp1 |
a0003 | a0003c0005 | a0003c0005t0001 | a0003c0005t0001g0116 a0003c0005t0001g0117 |
2 | 338 | 0.0059 | -14 | c.544 others(33): Show |
VRK2 | ENSG00000028116.18 | transcript | ENST00000340157.9 | protein_coding | 7/12 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | ||||||
VRK2_chr2_58041806_58164871 | 58120179 | CTTTTCTT others(7): Show |
C | intron_variant | MODIFIER | HG01891.hp1 HG02572.hp2 HG02647.hp1 others(7): Show |
a0001 | a0001c0003 | a0001c0003t0001a0001c0003t0004 | a0001c0003t0001g0009 a0001c0003t0001g0010 a0001c0003t0001g0012 others(7): Show |
10 | 330 | 0.0303 | -14 | c.544 others(31): Show |
VRK2 | ENSG00000028116.18 | transcript | ENST00000340157.9 | protein_coding | 7/12 | INFO_REALIGN_3_PRIME | chr2 | TogoVar |