Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
PTK2_chr8_140652900_141006282	140679003	GTTTTTTT others(8): Show GTTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG02976.hp1 NA18612.hp2 NA19009.hp1 others(1): Show HG02976.hp1 NA18612.hp2 NA19009.hp1 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0003t0001 a0001c0001t0001 a0001c0001t0002 a0001c0003t0001	a0001c0001t0001g0085 a0001c0001t0002g0011 a0001c0001t0002g0052 others(1): Show a0001c0001t0001g0085 a0001c0001t0002g0011 a0001c0001t0002g0052 a0001c0003t0001g0086	4	290	0.0138	-15	c.268 others(34): Show c.2686-3519_2686-3505delAAAAAAAAAAAAAAA	PTK2	ENSG00000169398.20	transcript	ENST00000696786.1	protein_coding	30/35			chr8	TogoVar
PTK2_chr8_140652900_141006282	140693564	TAAAAAAA others(8): Show TAAAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0258 a0001c0001t0001g0258	1	290	0.0035	-15	c.262 others(34): Show c.2623-6885_2623-6871delTTTTTTTTTTTTTTT	PTK2	ENSG00000169398.20	transcript	ENST00000696786.1	protein_coding	29/35			chr8	TogoVar
PTK2_chr8_140652900_141006282	140820104	TTTTTTTT others(8): Show TTTTTTTTTTTTTTTA	T T	intron_variant intron_variant	MODIFIER	HG03486.hp1 NA19074.hp1 HG03486.hp1 NA19074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0273 a0001c0001t0002g0223 a0001c0001t0001g0273 a0001c0001t0002g0223	2	290	0.0069	-15	c.649 others(32): Show c.649-1099_649-1085delTAAAAAAAAAAAAAA	PTK2	ENSG00000169398.20	transcript	ENST00000696786.1	protein_coding	8/35			chr8	TogoVar
PTK2_chr8_140652900_141006282	140856366	AAAAACAA others(8): Show AAAAACAAAACAAAAC	A A	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG01975.hp2 HG02055.hp2 others(13): Show HG01884.hp2 HG01975.hp2 HG02055.hp2 HG02109.hp1 HG02280.hp2 HG02486.hp1 HG02559.hp2 HG02717.hp1 HG02723.hp2 HG02970.hp1 HG03139.hp1 HG03225.hp2 HG03471.hp1 HG03516.hp1 HG03579.hp1 NA20129.hp2	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0155 a0001c0003t0001g0184 a0001c0003t0001g0205 others(13): Show a0001c0003t0001g0155 a0001c0003t0001g0184 a0001c0003t0001g0205 a0001c0003t0001g0215 a0001c0003t0001g0216 a0001c0003t0001g0220 a0001c0003t0001g0221 a0001c0003t0001g0222 a0001c0003t0001g0235 a0001c0003t0001g0236 a0001c0003t0001g0238 a0001c0003t0001g0242 a0001c0003t0001g0243 a0001c0003t0001g0246 a0001c0003t0001g0255 a0001c0003t0001g0276	16	290	0.0552	-15	c.450 others(32): Show c.450+7931_450+7945delGTTTTGTTTTGTTTT	PTK2	ENSG00000169398.20	transcript	ENST00000696786.1	protein_coding	5/35			chr8	TogoVar
PTK2_chr8_140652900_141006282	140970843	TTGTCTGA others(8): Show TTGTCTGACTACAACA	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00609.hp1 HG00639.hp1 others(74): Show HG00140.hp1 HG00609.hp1 HG00639.hp1 HG00642.hp2 HG00738.hp1 HG00741.hp1 HG01070.hp1 HG01071.hp2 HG01074.hp1 HG01099.hp2 HG01109.hp2 HG01175.hp1 HG01243.hp1 HG01255.hp2 HG01256.hp1 HG01261.hp2 HG01361.hp2 HG01496.hp1 HG01515.hp1 HG01891.hp2 HG02015.hp2 HG02083.hp2 HG02145.hp2 HG02155.hp2 HG02165.hp2 HG02293.hp2 HG02300.hp1 HG02886.hp1 HG03017.hp2 HG03098.hp1 HG03239.hp1 HG03654.hp2 HG03704.hp2 HG03710.hp1 HG03831.hp2 HG03834.hp1 HG03927.hp1 HG04115.hp1 HG04184.hp2 HG04199.hp1 HG06807.hp1 NA18612.hp2 NA18747.hp2 NA18941.hp1 NA18952.hp2 NA18954.hp2 NA18956.hp1 NA18961.hp2 NA18964.hp1 NA18967.hp1 NA18969.hp1 NA18970.hp2 NA18979.hp1 NA18983.hp1 NA18989.hp1 NA18990.hp1 NA18998.hp1 NA19001.hp2 NA19005.hp2 NA19007.hp1 NA19009.hp1 NA19012.hp1 NA19043.hp2 NA19063.hp1 NA19064.hp1 NA19065.hp1 NA19066.hp1 NA19070.hp1 NA19076.hp1 NA19077.hp2 NA19081.hp1 NA19084.hp2 NA19085.hp2 NA19087.hp1 NA19091.hp2 NA20805.hp1 NA20905.hp1	a0001 a0002 a0003 others(3): Show a0001 a0002 a0003 a0004 a0007 a0008	a0001c0001 a0002c0002 a0003c0007 others(3): Show a0001c0001 a0002c0002 a0003c0007 a0004c0012 a0007c0009 a0008c0006	a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0009 a0001c0001t0016 a0001c0001t0019 a0002c0002t0001 a0002c0002t0014 a0003c0007t0002 a0004c0012t0002 a0007c0009t0002 a0008c0006t0002	a0001c0001t0001g0021 a0001c0001t0002g0011 a0001c0001t0002g0012 others(74): Show a0001c0001t0001g0021 a0001c0001t0002g0011 a0001c0001t0002g0012 a0001c0001t0002g0013 a0001c0001t0002g0014 a0001c0001t0002g0015 a0001c0001t0002g0016 a0001c0001t0002g0017 a0001c0001t0002g0018 a0001c0001t0002g0022 a0001c0001t0002g0023 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0026 a0001c0001t0002g0028 a0001c0001t0002g0029 a0001c0001t0002g0031 a0001c0001t0002g0032 a0001c0001t0002g0033 a0001c0001t0002g0034 a0001c0001t0002g0035 a0001c0001t0002g0036 a0001c0001t0002g0037 a0001c0001t0002g0038 a0001c0001t0002g0039 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0042 a0001c0001t0002g0043 a0001c0001t0002g0044 a0001c0001t0002g0045 a0001c0001t0002g0046 a0001c0001t0002g0047 a0001c0001t0002g0048 a0001c0001t0002g0049 a0001c0001t0002g0051 a0001c0001t0002g0052 a0001c0001t0002g0053 a0001c0001t0002g0054 a0001c0001t0002g0055 a0001c0001t0002g0056 a0001c0001t0002g0058 a0001c0001t0002g0060 a0001c0001t0002g0061 a0001c0001t0002g0062 a0001c0001t0002g0063 a0001c0001t0002g0064 a0001c0001t0002g0065 a0001c0001t0002g0066 a0001c0001t0002g0067 a0001c0001t0002g0068 a0001c0001t0002g0070 a0001c0001t0002g0071 a0001c0001t0002g0072 a0001c0001t0002g0073 a0001c0001t0002g0074 a0001c0001t0002g0075 a0001c0001t0002g0076 a0001c0001t0002g0077 a0001c0001t0002g0078 a0001c0001t0002g0079 a0001c0001t0002g0080 a0001c0001t0002g0081 a0001c0001t0002g0082 a0001c0001t0002g0083 a0001c0001t0002g0270 a0001c0001t0002g0271 a0001c0001t0002g0272 a0001c0001t0009g0001 a0001c0001t0016g0019 a0001c0001t0019g0020 a0002c0002t0001g0069 a0002c0002t0014g0057 a0003c0007t0002g0059 a0004c0012t0002g0030 a0007c0009t0002g0027 a0008c0006t0002g0050	77	290	0.2655	-15	c.-12 others(36): Show c.-122+30267_-122+30281delTGTTGTAGTCAGACA	PTK2	ENSG00000169398.20	transcript	ENST00000696786.1	protein_coding	1/35			chr8	TogoVar
PTK7_chr6_43071314_43166715	43116603	TTTGTGTG others(8): Show TTTGTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	NA18522.hp2 NA18522.hp2	a0007 a0007	a0007c0026 a0007c0026	a0007c0026t0006 a0007c0026t0006	a0007c0026t0006g0226 a0007c0026t0006g0226	1	272	0.0037	-15	c.80- others(32): Show c.80-12372_80-12358delTGTGTGTGTGTGTGT	PTK7	ENSG00000112655.16	transcript	ENST00000230419.9	protein_coding	1/19		INFO_REALIGN_3_PRIME	chr6	TogoVar
PTK7_chr6_43071314_43166715	43150461	CTGGAAAG others(8): Show CTGGAAAGATAGCAAG	C C	intron_variant intron_variant	MODIFIER	HG03710.hp1 HG03710.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0161 a0001c0002t0001g0161	1	272	0.0037	-15	c.272 others(34): Show c.2721+3765_2721+3779delGGAAAGATAGCAAGT	PTK7	ENSG00000112655.16	transcript	ENST00000230419.9	protein_coding	17/19		INFO_REALIGN_3_PRIME	chr6	TogoVar
PTK7_chr6_43071314_43166715	43152734	TTTATGTT others(8): Show TTTATGTTATGTTATG	T T	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG00741.hp2 HG02055.hp2 others(9): Show HG00733.hp1 HG00741.hp2 HG02055.hp2 HG02717.hp1 HG03209.hp2 HG03225.hp2 HG03540.hp2 NA18522.hp1 NA18906.hp1 NA18961.hp2 NA19043.hp1 NA19068.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0002 a0001c0010 others(2): Show a0001c0001 a0001c0002 a0001c0010 a0001c0022 a0003c0018	a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0002t0001 a0001c0002t0002 a0001c0002t0004 a0001c0010t0002 a0001c0022t0001 a0003c0018t0002	a0001c0001t0001g0230 a0001c0001t0002g0004 a0001c0001t0002g0028 others(9): Show a0001c0001t0001g0230 a0001c0001t0002g0004 a0001c0001t0002g0028 a0001c0001t0002g0044 a0001c0002t0001g0056 a0001c0002t0001g0136 a0001c0002t0001g0203 a0001c0002t0002g0253 a0001c0002t0004g0139 a0001c0010t0002g0061 a0001c0022t0001g0232 a0003c0018t0002g0225	12	272	0.0441	-15	c.272 others(34): Show c.2722-6036_2722-6022delTATGTTATGTTATGT	PTK7	ENSG00000112655.16	transcript	ENST00000230419.9	protein_coding	17/19		INFO_REALIGN_3_PRIME	chr6	TogoVar
PTP4A2_chr1_31901421_31943368	31908135	TTATATTA others(8): Show TTATATTATATATATA	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01168.hp1 HG01175.hp1 HG01192.hp1 others(4): Show HG01168.hp1 HG01175.hp1 HG01192.hp1 HG01517.hp2 NA18983.hp1 NA19009.hp1 NA19070.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0113 a0001c0001t0003 a0001c0001t0113	a0001c0001t0003g0008 a0001c0001t0003g0172 a0001c0001t0003g0261 others(3): Show a0001c0001t0003g0008 a0001c0001t0003g0172 a0001c0001t0003g0261 a0001c0001t0003g0268 a0001c0001t0003g0274 a0001c0001t0113g0149	7	354	0.0198	-15	c.70 others(24): Show c.702_*716delTATATATATAATATA	PTP4A2	ENSG00000184007.22	transcript	ENST00000647444.2	protein_coding	6/6	702		chr1	TogoVar
PTP4A2_chr1_31901421_31943368	31930208	GGCGCCTG others(8): Show GGCGCCTGTAGTTCCA	G G	intron_variant intron_variant	MODIFIER	HG03516.hp1 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0144 a0001c0001t0144	a0001c0001t0144g0116 a0001c0001t0144g0116	1	354	0.0028	-15	c.-59 others(34): Show c.-594+7764_-594+7778delTGGAACTACAGGCGC	PTP4A2	ENSG00000184007.22	transcript	ENST00000647444.2	protein_coding	1/5			chr1	TogoVar
PTPN12_chr7_77532295_77645069	77573090	AAAAAAAC others(8): Show AAAAAAACAAAAAAAC	A A	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02965.hp1 HG03471.hp1 others(1): Show HG02572.hp2 HG02965.hp1 HG03471.hp1 NA18955.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0003 a0002c0002t0001 a0001c0001t0001 a0001c0001t0003 a0002c0002t0001	a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0003g0176 others(1): Show a0001c0001t0001g0174 a0001c0001t0001g0175 a0001c0001t0003g0176 a0002c0002t0001g0069	4	310	0.0129	-15	c.208 others(32): Show c.208+1911_208+1925delCAAAAAAACAAAAAA	PTPN12	ENSG00000127947.16	transcript	ENST00000248594.11	protein_coding	2/17		INFO_REALIGN_3_PRIME	chr7	TogoVar
PTPN12_chr7_77532295_77645069	77581038	TTTTTGTT others(8): Show TTTTTGTTTTGTTTTG	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00408.hp2 HG00609.hp2 others(109): Show HG00140.hp1 HG00408.hp2 HG00609.hp2 HG00639.hp2 HG00673.hp2 HG00733.hp1 HG00738.hp2 HG00741.hp2 HG01070.hp2 HG01071.hp1 HG01074.hp1 HG01081.hp1 HG01099.hp1 HG01099.hp2 HG01169.hp1 HG01175.hp1 HG01175.hp2 HG01243.hp2 HG01256.hp2 HG01257.hp1 HG01258.hp1 HG01346.hp1 HG01358.hp1 HG01516.hp2 HG01517.hp2 HG01891.hp2 HG01952.hp1 HG01975.hp2 HG01981.hp1 HG01993.hp1 HG02004.hp1 HG02080.hp1 HG02132.hp2 HG02135.hp2 HG02165.hp2 HG02257.hp2 HG02258.hp2 HG02280.hp2 HG02293.hp1 HG02293.hp2 HG02559.hp2 HG02615.hp1 HG02683.hp1 HG02698.hp1 HG02735.hp2 HG02922.hp1 HG02970.hp2 HG03017.hp2 HG03139.hp1 HG03139.hp2 HG03195.hp1 HG03225.hp1 HG03453.hp1 HG03486.hp1 HG03516.hp2 HG03579.hp2 HG03669.hp2 HG03710.hp2 HG03831.hp1 HG03927.hp2 HG03942.hp1 HG04184.hp2 HG04199.hp2 HG04228.hp1 HG06807.hp1 NA18612.hp1 NA18939.hp1 NA18939.hp2 NA18942.hp1 NA18945.hp1 NA18946.hp2 NA18949.hp1 NA18953.hp1 NA18955.hp1 NA18957.hp1 NA18962.hp2 NA18964.hp1 NA18970.hp1 NA18971.hp1 NA18975.hp2 NA18980.hp2 NA18981.hp2 NA18983.hp1 NA18984.hp2 NA18987.hp1 NA18990.hp2 NA18992.hp1 NA18993.hp2 NA18998.hp2 NA19003.hp1 NA19005.hp1 NA19007.hp1 NA19009.hp2 NA19043.hp1 NA19054.hp1 NA19056.hp2 NA19063.hp1 NA19066.hp1 NA19067.hp2 NA19068.hp1 NA19070.hp1 NA19072.hp1 NA19079.hp2 NA19081.hp2 NA19082.hp1 NA19087.hp1 NA19088.hp1 NA19091.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20905.hp1	a0002 a0005 a0006 a0002 a0005 a0006	a0002c0002 a0005c0005 a0006c0006 a0002c0002 a0005c0005 a0006c0006	a0002c0002t0001 a0002c0002t0004 a0005c0005t0001 others(1): Show a0002c0002t0001 a0002c0002t0004 a0005c0005t0001 a0006c0006t0001	a0002c0002t0001g0002 a0002c0002t0001g0004 a0002c0002t0001g0008 others(109): Show a0002c0002t0001g0002 a0002c0002t0001g0004 a0002c0002t0001g0008 a0002c0002t0001g0009 a0002c0002t0001g0010 a0002c0002t0001g0011 a0002c0002t0001g0012 a0002c0002t0001g0013 a0002c0002t0001g0014 a0002c0002t0001g0015 a0002c0002t0001g0016 a0002c0002t0001g0017 a0002c0002t0001g0018 a0002c0002t0001g0021 a0002c0002t0001g0022 a0002c0002t0001g0023 a0002c0002t0001g0024 a0002c0002t0001g0025 a0002c0002t0001g0026 a0002c0002t0001g0028 a0002c0002t0001g0029 a0002c0002t0001g0030 a0002c0002t0001g0031 a0002c0002t0001g0032 a0002c0002t0001g0033 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0001g0037 a0002c0002t0001g0038 a0002c0002t0001g0039 a0002c0002t0001g0040 a0002c0002t0001g0041 a0002c0002t0001g0042 a0002c0002t0001g0043 a0002c0002t0001g0044 a0002c0002t0001g0045 a0002c0002t0001g0046 a0002c0002t0001g0047 a0002c0002t0001g0049 a0002c0002t0001g0050 a0002c0002t0001g0053 a0002c0002t0001g0054 a0002c0002t0001g0055 a0002c0002t0001g0056 a0002c0002t0001g0057 a0002c0002t0001g0058 a0002c0002t0001g0059 a0002c0002t0001g0060 a0002c0002t0001g0061 a0002c0002t0001g0062 a0002c0002t0001g0063 a0002c0002t0001g0064 a0002c0002t0001g0065 a0002c0002t0001g0066 a0002c0002t0001g0067 a0002c0002t0001g0068 a0002c0002t0001g0069 a0002c0002t0001g0070 a0002c0002t0001g0071 a0002c0002t0001g0072 a0002c0002t0001g0073 a0002c0002t0001g0074 a0002c0002t0001g0075 a0002c0002t0001g0076 a0002c0002t0001g0077 a0002c0002t0001g0078 a0002c0002t0001g0079 a0002c0002t0001g0080 a0002c0002t0001g0081 a0002c0002t0001g0082 a0002c0002t0001g0083 a0002c0002t0001g0084 a0002c0002t0001g0085 a0002c0002t0001g0086 a0002c0002t0001g0087 a0002c0002t0001g0088 a0002c0002t0001g0089 a0002c0002t0001g0090 a0002c0002t0001g0091 a0002c0002t0001g0092 a0002c0002t0001g0093 a0002c0002t0001g0094 a0002c0002t0001g0095 a0002c0002t0001g0096 a0002c0002t0001g0097 a0002c0002t0001g0098 a0002c0002t0001g0099 a0002c0002t0001g0100 a0002c0002t0001g0101 a0002c0002t0001g0102 a0002c0002t0001g0103 a0002c0002t0001g0104 a0002c0002t0001g0106 a0002c0002t0001g0113 a0002c0002t0001g0122 a0002c0002t0001g0123 a0002c0002t0001g0125 a0002c0002t0001g0126 a0002c0002t0001g0173 a0002c0002t0001g0221 a0002c0002t0001g0222 a0002c0002t0001g0229 a0002c0002t0001g0247 a0002c0002t0001g0296 a0002c0002t0001g0306 a0002c0002t0001g0309 a0002c0002t0001g0310 a0002c0002t0004g0052 a0005c0005t0001g0048 a0005c0005t0001g0051 a0006c0006t0001g0124	112	310	0.3613	-15	c.209 others(30): Show c.209-374_209-360delGTTTTGTTTTGTTTT	PTPN12	ENSG00000127947.16	transcript	ENST00000248594.11	protein_coding	2/17		INFO_REALIGN_3_PRIME	chr7	TogoVar
PTPN12_chr7_77532295_77645069	77582084	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA18984.hp2 NA18984.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0099 a0002c0002t0001g0099	1	310	0.0032	-15	c.285 others(30): Show c.285+595_285+609delTTTTTTTTTTTTTTT	PTPN12	ENSG00000127947.16	transcript	ENST00000248594.11	protein_coding	3/17		INFO_REALIGN_3_PRIME	chr7	TogoVar
PTPN12_chr7_77532295_77645069	77641210	ATTTTTTT others(8): Show ATTTTTTTTTTTTTTT	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01243.hp1 HG02717.hp1 HG01243.hp1 HG02717.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0002	a0003c0003t0002g0151 a0003c0003t0002g0153 a0003c0003t0002g0151 a0003c0003t0002g0153	2	310	0.0065	-15	c.19 others(26): Show c.1931_*1945delTTTTTTTTTTTTTTT	PTPN12	ENSG00000127947.16	transcript	ENST00000248594.11	protein_coding		1142		chr7	TogoVar
PTPN13_chr4_86589315_86820161	86731454	AATATTTT others(8): Show AATATTTTCTTGCTGG	A A	intron_variant intron_variant	MODIFIER	NA20300.hp1 NA20300.hp1	a0003 a0003	a0003c0002 a0003c0002	a0003c0002t0002 a0003c0002t0002	a0003c0002t0002g0014 a0003c0002t0002g0014	1	198	0.0051	-15	c.160 others(32): Show c.1609-945_1609-931delATATTTTCTTGCTGG	PTPN13	ENSG00000163629.13	transcript	ENST00000411767.7	protein_coding	10/47			chr4	TogoVar
PTPN13_chr4_86589315_86820161	86747534	AGCAGCAG others(8): Show AGCAGCAGCAGCAGCG	A A	intron_variant intron_variant	MODIFIER	HG00738.hp2 HG01099.hp1 HG01123.hp2 others(7): Show HG00738.hp2 HG01099.hp1 HG01123.hp2 HG01175.hp2 HG01192.hp1 HG01346.hp1 HG01516.hp1 HG02735.hp2 NA18906.hp1 NA18969.hp1	a0004 a0021 a0004 a0021	a0004c0005 a0004c0029 a0021c0016 a0004c0005 a0004c0029 a0021c0016	a0004c0005t0004 a0004c0005t0005 a0004c0029t0005 others(1): Show a0004c0005t0004 a0004c0005t0005 a0004c0029t0005 a0021c0016t0006	a0004c0005t0004g0001 a0004c0005t0004g0002 a0004c0005t0004g0003 others(7): Show a0004c0005t0004g0001 a0004c0005t0004g0002 a0004c0005t0004g0003 a0004c0005t0004g0004 a0004c0005t0004g0005 a0004c0005t0004g0009 a0004c0005t0005g0076 a0004c0005t0005g0084 a0004c0029t0005g0077 a0021c0016t0006g0198	10	198	0.0505	-15	c.265 others(34): Show c.2650+2421_2650+2435delGGCAGCAGCAGCAGC	PTPN13	ENSG00000163629.13	transcript	ENST00000411767.7	protein_coding	17/47		INFO_REALIGN_3_PRIME	chr4	TogoVar
PTPN13_chr4_86589315_86820161	86747549	GGCAGCAG others(8): Show GGCAGCAGCAGCAGCA	G G	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG00642.hp2	a0012 a0012	a0012c0024 a0012c0024	a0012c0024t0002 a0012c0024t0002	a0012c0024t0002g0143 a0012c0024t0002g0143	1	198	0.0051	-15	c.265 others(34): Show c.2650+2441_2650+2455delCAGCAGCAGCAGCAG	PTPN13	ENSG00000163629.13	transcript	ENST00000411767.7	protein_coding	17/47		INFO_REALIGN_3_PRIME	chr4	TogoVar
PTPN14_chr1_214343700_214556602	214351293	AAAAAAAA others(8): Show AAAAAAAAAAAAAAAG	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02572.hp1 HG02615.hp2 HG02572.hp1 HG02615.hp2	a0001 a0001	a0001c0006 a0001c0025 a0001c0006 a0001c0025	a0001c0006t0180 a0001c0025t0169 a0001c0006t0180 a0001c0025t0169	a0001c0006t0180g0272 a0001c0025t0169g0256 a0001c0006t0180g0272 a0001c0025t0169g0256	2	272	0.0074	-15	c.66 others(26): Show c.6614_*6628delCTTTTTTTTTTTTTT	PTPN14	ENSG00000152104.12	transcript	ENST00000366956.10	protein_coding	19/19	6614		chr1	TogoVar
PTPN14_chr1_214343700_214556602	214530726	CCTTTTGT others(8): Show CCTTTTGTTGTCAAAA	C C	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02615.hp1 HG02622.hp1 others(2): Show HG02145.hp1 HG02615.hp1 HG02622.hp1 HG02970.hp2 HG03130.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0020 a0002c0003 a0001c0001 a0001c0020 a0002c0003	a0001c0001t0024 a0001c0001t0090 a0001c0001t0141 others(2): Show a0001c0001t0024 a0001c0001t0090 a0001c0001t0141 a0001c0020t0014 a0002c0003t0086	a0001c0001t0024g0233 a0001c0001t0090g0027 a0001c0001t0141g0232 others(2): Show a0001c0001t0024g0233 a0001c0001t0090g0027 a0001c0001t0141g0232 a0001c0020t0014g0025 a0002c0003t0086g0026	5	272	0.0184	-15	c.-15 others(36): Show c.-155+20442_-155+20456delTTTTGACAACAAAAG	PTPN14	ENSG00000152104.12	transcript	ENST00000366956.10	protein_coding	1/18			chr1	TogoVar
PTPN1_chr20_50505383_50590241	50506320	CAAACAAA others(8): Show CAAACAAAACAAAACA	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00673.hp1 HG00673.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0164 a0001c0001t0001g0164	1	336	0.0030	-15	c.-42 others(26): Show c.-4207_-4193delAAACAAAACAAAACA	PTPN1	ENSG00000196396.10	transcript	ENST00000371621.5	protein_coding		4062		chr20	TogoVar
PTPN1_chr20_50505383_50590241	50530635	CTGCTGGG others(8): Show CTGCTGGGATTACAAG	C C	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG03225.hp1 HG02486.hp2 HG03225.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0310 a0001c0001t0001g0311 a0001c0001t0001g0310 a0001c0001t0001g0311	2	336	0.0060	-15	c.63+ others(32): Show c.63+20061_63+20075delTGCTGGGATTACAAG	PTPN1	ENSG00000196396.10	transcript	ENST00000371621.5	protein_coding	1/9		INFO_REALIGN_3_PRIME	chr20	TogoVar
PTPN21_chr14_88460778_88560007	88474141	AAAAAAAA others(8): Show AAAAAAAAAAAAAAAC	A A	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02280.hp1 HG03098.hp1 HG01884.hp2 HG02280.hp1 HG03098.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0016 a0002c0002t0016	a0002c0002t0016g0265 a0002c0002t0016g0266 a0002c0002t0016g0267 a0002c0002t0016g0265 a0002c0002t0016g0266 a0002c0002t0016g0267	3	348	0.0086	-15	c.251 others(32): Show c.2512-354_2512-340delGTTTTTTTTTTTTTT	PTPN21	ENSG00000070778.13	transcript	ENST00000556564.6	protein_coding	13/18			chr14	TogoVar
PTPN21_chr14_88460778_88560007	88518406	ATATATAT others(8): Show ATATATATATTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG03490.hp2 HG03492.hp2 HG04228.hp1 HG03490.hp2 HG03492.hp2 HG04228.hp1	a0004 a0004	a0004c0003 a0004c0003	a0004c0003t0006 a0004c0003t0019 a0004c0003t0006 a0004c0003t0019	a0004c0003t0006g0096 a0004c0003t0019g0099 a0004c0003t0019g0100 a0004c0003t0006g0096 a0004c0003t0019g0099 a0004c0003t0019g0100	3	348	0.0086	-15	c.181 others(32): Show c.181-1160_181-1146delAAAAAAATATATATA	PTPN21	ENSG00000070778.13	transcript	ENST00000556564.6	protein_coding	2/18			chr14	TogoVar
PTPN21_chr14_88460778_88560007	88518408	ATATATAT others(8): Show ATATATATTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02818.hp2 HG03579.hp2 others(2): Show HG02622.hp1 HG02818.hp2 HG03579.hp2 NA18960.hp2 NA19066.hp1	a0001 a0002 a0004 a0001 a0002 a0004	a0001c0001 a0002c0002 a0002c0008 others(1): Show a0001c0001 a0002c0002 a0002c0008 a0004c0003	a0001c0001t0028 a0002c0002t0029 a0002c0008t0006 others(1): Show a0001c0001t0028 a0002c0002t0029 a0002c0008t0006 a0004c0003t0006	a0001c0001t0028g0097 a0002c0002t0029g0092 a0002c0008t0006g0089 others(2): Show a0001c0001t0028g0097 a0002c0002t0029g0092 a0002c0008t0006g0089 a0002c0008t0006g0091 a0004c0003t0006g0094	5	348	0.0144	-15	c.181 others(32): Show c.181-1162_181-1148delAAAAAAAAATATATA	PTPN21	ENSG00000070778.13	transcript	ENST00000556564.6	protein_coding	2/18			chr14	TogoVar
PTPN21_chr14_88460778_88560007	88518410	ATATATTT others(8): Show ATATATTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	NA18953.hp2 NA18953.hp2	a0004 a0004	a0004c0003 a0004c0003	a0004c0003t0006 a0004c0003t0006	a0004c0003t0006g0093 a0004c0003t0006g0093	1	348	0.0029	-15	c.181 others(32): Show c.181-1164_181-1150delAAAAAAAAAAATATA	PTPN21	ENSG00000070778.13	transcript	ENST00000556564.6	protein_coding	2/18			chr14	TogoVar
PTPN22_chr1_113808811_113876712	113826397	GGGGAAGG others(8): Show GGGGAAGGGAAGGGAA	G G	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00423.hp2 HG00597.hp1 others(61): Show HG00099.hp1 HG00423.hp2 HG00597.hp1 HG00642.hp1 HG00673.hp1 HG00673.hp2 HG00733.hp1 HG01070.hp2 HG01081.hp1 HG01099.hp1 HG01169.hp2 HG01255.hp1 HG01358.hp2 HG01433.hp2 HG01496.hp1 HG01943.hp1 HG02056.hp2 HG02071.hp2 HG02129.hp1 HG02132.hp2 HG02155.hp2 HG02300.hp2 HG02683.hp1 HG03688.hp2 HG03834.hp2 HG04184.hp2 HG04199.hp1 NA18747.hp2 NA18941.hp1 NA18942.hp1 NA18943.hp2 NA18944.hp1 NA18947.hp2 NA18949.hp1 NA18951.hp2 NA18959.hp1 NA18960.hp1 NA18962.hp2 NA18965.hp2 NA18966.hp2 NA18967.hp1 NA18971.hp1 NA18987.hp1 NA18989.hp1 NA18990.hp1 NA18994.hp2 NA18995.hp2 NA19002.hp2 NA19004.hp2 NA19006.hp2 NA19011.hp1 NA19054.hp2 NA19056.hp1 NA19058.hp2 NA19060.hp2 NA19064.hp1 NA19065.hp2 NA19066.hp2 NA19075.hp2 NA19080.hp2 NA19082.hp1 NA19083.hp2 NA19085.hp1 NA19086.hp2	a0001 a0001	a0001c0001 a0001c0007 a0001c0001 a0001c0007	a0001c0001t0003 a0001c0007t0003 a0001c0001t0003 a0001c0007t0003	a0001c0001t0003g0012 a0001c0001t0003g0182 a0001c0001t0003g0183 others(60): Show a0001c0001t0003g0012 a0001c0001t0003g0182 a0001c0001t0003g0183 a0001c0001t0003g0262 a0001c0001t0003g0285 a0001c0001t0003g0286 a0001c0001t0003g0287 a0001c0001t0003g0288 a0001c0001t0003g0289 a0001c0001t0003g0290 a0001c0001t0003g0291 a0001c0001t0003g0292 a0001c0001t0003g0293 a0001c0001t0003g0294 a0001c0001t0003g0295 a0001c0001t0003g0297 a0001c0001t0003g0298 a0001c0001t0003g0299 a0001c0001t0003g0300 a0001c0001t0003g0301 a0001c0001t0003g0302 a0001c0001t0003g0303 a0001c0001t0003g0304 a0001c0001t0003g0305 a0001c0001t0003g0306 a0001c0001t0003g0307 a0001c0001t0003g0308 a0001c0001t0003g0309 a0001c0001t0003g0310 a0001c0001t0003g0311 a0001c0001t0003g0312 a0001c0001t0003g0313 a0001c0001t0003g0314 a0001c0001t0003g0315 a0001c0001t0003g0316 a0001c0001t0003g0317 a0001c0001t0003g0318 a0001c0001t0003g0319 a0001c0001t0003g0321 a0001c0001t0003g0322 a0001c0001t0003g0324 a0001c0001t0003g0325 a0001c0001t0003g0326 a0001c0001t0003g0327 a0001c0001t0003g0328 a0001c0001t0003g0329 a0001c0001t0003g0330 a0001c0001t0003g0331 a0001c0001t0003g0332 a0001c0001t0003g0333 a0001c0001t0003g0334 a0001c0001t0003g0335 a0001c0001t0003g0336 a0001c0001t0003g0337 a0001c0001t0003g0338 a0001c0001t0003g0340 a0001c0001t0003g0341 a0001c0001t0003g0342 a0001c0001t0003g0344 a0001c0001t0003g0345 a0001c0001t0003g0346 a0001c0007t0003g0283 a0001c0007t0003g0284	64	358	0.1788	-15	c.225 others(34): Show c.2251-1240_2251-1226delTTCCCTTCCCTTCCC	PTPN22	ENSG00000134242.16	transcript	ENST00000359785.10	protein_coding	18/20			chr1	TogoVar
PTPN2_chr18_12787152_12889237	12866437	AAAAACAA others(8): Show AAAAACAAAACAAAAC	A A	intron_variant intron_variant	MODIFIER	HG02132.hp1 HG03130.hp1 HG02132.hp1 HG03130.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0026 a0001c0001t0004 a0001c0001t0026	a0001c0001t0004g0109 a0001c0001t0026g0087 a0001c0001t0004g0109 a0001c0001t0026g0087	2	370	0.0054	-15	c.70- others(30): Show c.70-7198_70-7184delGTTTTGTTTTGTTTT	PTPN2	ENSG00000175354.20	transcript	ENST00000309660.10	protein_coding	1/8			chr18	TogoVar
PTPN2_chr18_12787152_12889237	12877797	GTCAGGAG others(8): Show GTCAGGAGATCAAGAC	G G	intron_variant intron_variant	MODIFIER	NA18612.hp2 NA18612.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0035 a0001c0001t0002g0035	1	370	0.0027	-15	c.69+ others(30): Show c.69+6261_69+6275delGTCTTGATCTCCTGA	PTPN2	ENSG00000175354.20	transcript	ENST00000309660.10	protein_coding	1/8			chr18	TogoVar
PTPN3_chr9_109370700_109503307	109416436	TTTGTTTT others(8): Show TTTGTTTTTTTGTTTC	T T	intron_variant intron_variant	MODIFIER	HG00408.hp1 HG00673.hp2 HG01258.hp1 others(15): Show HG00408.hp1 HG00673.hp2 HG01258.hp1 HG01346.hp2 HG01975.hp1 HG02135.hp2 NA18522.hp2 NA18952.hp1 NA18954.hp1 NA18983.hp2 NA18985.hp1 NA18990.hp1 NA19009.hp1 NA19010.hp1 NA19054.hp1 NA19058.hp2 NA19064.hp2 NA19084.hp1	a0001 a0002 a0006 others(1): Show a0001 a0002 a0006 a0011	a0001c0005 a0002c0002 a0002c0003 others(2): Show a0001c0005 a0002c0002 a0002c0003 a0006c0008 a0011c0014	a0001c0005t0008 a0001c0005t0016 a0002c0002t0008 others(7): Show a0001c0005t0008 a0001c0005t0016 a0002c0002t0008 a0002c0002t0012 a0002c0003t0008 a0002c0003t0016 a0002c0003t0029 a0002c0003t0050 a0006c0008t0008 a0011c0014t0016	a0001c0005t0008g0213 a0001c0005t0008g0214 a0001c0005t0008g0215 others(15): Show a0001c0005t0008g0213 a0001c0005t0008g0214 a0001c0005t0008g0215 a0001c0005t0008g0220 a0001c0005t0016g0236 a0002c0002t0008g0011 a0002c0002t0012g0158 a0002c0003t0008g0021 a0002c0003t0008g0023 a0002c0003t0008g0037 a0002c0003t0008g0041 a0002c0003t0016g0026 a0002c0003t0016g0039 a0002c0003t0029g0019 a0002c0003t0029g0110 a0002c0003t0050g0006 a0006c0008t0008g0036 a0011c0014t0016g0022	18	290	0.0621	-15	c.131 others(34): Show c.1313+3973_1313+3987delGAAACAAAAAAACAA	PTPN3	ENSG00000070159.14	transcript	ENST00000374541.4	protein_coding	14/25			chr9	TogoVar
PTPN4_chr2_119754922_119989899	119775096	GAAAAAAA others(8): Show GAAAAAAAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	NA21309.hp2 NA21309.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0237 a0001c0001t0011g0237	1	252	0.0040	-15	c.-18 others(34): Show c.-18+14727_-18+14741delAAAAAAAAAAAAAAA	PTPN4	ENSG00000088179.9	transcript	ENST00000263708.7	protein_coding	1/26		INFO_REALIGN_3_PRIME	chr2	TogoVar
PTPN4_chr2_119754922_119989899	119973655	GTTTTTTT others(8): Show GTTTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG02486.hp2 HG02559.hp2 HG02922.hp2 others(1): Show HG02486.hp2 HG02559.hp2 HG02922.hp2 HG03453.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0114 a0001c0001t0009g0115 a0001c0001t0009g0150 others(1): Show a0001c0001t0009g0114 a0001c0001t0009g0115 a0001c0001t0009g0150 a0001c0001t0009g0151	4	252	0.0159	-15	c.269 others(34): Show c.2695-3316_2695-3302delTTTTTTTTTTTTTTT	PTPN4	ENSG00000088179.9	transcript	ENST00000263708.7	protein_coding	26/26		INFO_REALIGN_3_PRIME	chr2	TogoVar
PTPN7_chr1_202142016_202165602	202161008	AGCCCTCT others(8): Show AGCCCTCTCCCTCAAG	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp2 HG00438.hp1 HG00544.hp1 others(91): Show HG00280.hp2 HG00438.hp1 HG00544.hp1 HG00621.hp2 HG01496.hp1 HG01884.hp2 HG01891.hp2 HG01975.hp2 HG02071.hp2 HG02145.hp1 HG02145.hp2 HG02257.hp1 HG02280.hp1 HG02451.hp2 HG02572.hp1 HG02630.hp2 HG02717.hp1 HG02723.hp1 HG02818.hp1 HG02886.hp1 HG02886.hp2 HG02895.hp1 HG02895.hp2 HG02896.hp2 HG02897.hp1 HG02965.hp1 HG02976.hp1 HG03041.hp2 HG03098.hp2 HG03130.hp1 HG03209.hp2 HG03225.hp2 HG03453.hp1 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03516.hp2 HG03579.hp1 HG03579.hp2 NA18522.hp2 NA18906.hp1 NA18906.hp2 NA18939.hp2 NA18940.hp1 NA18941.hp1 NA18942.hp1 NA18942.hp2 NA18943.hp1 NA18945.hp1 NA18947.hp1 NA18948.hp1 NA18949.hp1 NA18956.hp1 NA18962.hp1 NA18968.hp1 NA18968.hp2 NA18973.hp2 NA18977.hp1 NA18978.hp2 NA18979.hp1 NA18979.hp2 NA18981.hp1 NA18982.hp2 NA18988.hp2 NA18989.hp1 NA18990.hp1 NA18992.hp2 NA19003.hp1 NA19007.hp1 NA19007.hp2 NA19010.hp2 NA19011.hp2 NA19030.hp1 NA19043.hp1 NA19043.hp2 NA19054.hp2 NA19056.hp2 NA19058.hp2 NA19063.hp1 NA19064.hp1 NA19065.hp1 NA19067.hp2 NA19070.hp1 NA19070.hp2 NA19078.hp1 NA19080.hp1 NA19081.hp1 NA19082.hp2 NA19087.hp1 NA19091.hp2 NA19240.hp2 NA20129.hp2 NA21309.hp1 NA21309.hp2	a0001 a0002 a0006 a0001 a0002 a0006	a0001c0001 a0001c0002 a0001c0004 others(2): Show a0001c0001 a0001c0002 a0001c0004 a0002c0003 a0006c0009	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0002t0001 a0001c0004t0002 a0002c0003t0001 a0006c0009t0001	a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0013 others(71): Show a0001c0001t0001g0008 a0001c0001t0001g0011 a0001c0001t0001g0013 a0001c0001t0001g0032 a0001c0001t0001g0044 a0001c0001t0001g0045 a0001c0001t0001g0169 a0001c0001t0001g0229 a0001c0001t0001g0284 a0001c0001t0001g0290 a0001c0001t0001g0291 a0001c0001t0001g0292 a0001c0001t0001g0297 a0001c0001t0001g0298 a0001c0001t0001g0299 a0001c0001t0001g0300 a0001c0001t0001g0305 a0001c0001t0001g0306 a0001c0001t0001g0307 a0001c0001t0001g0312 a0001c0001t0001g0317 a0001c0001t0001g0318 a0001c0001t0001g0319 a0001c0001t0001g0320 a0001c0001t0001g0322 a0001c0001t0001g0325 a0001c0001t0001g0326 a0001c0001t0001g0329 a0001c0001t0001g0331 a0001c0001t0001g0333 a0001c0001t0001g0334 a0001c0001t0001g0339 a0001c0001t0001g0341 a0001c0001t0001g0342 a0001c0001t0001g0343 a0001c0001t0001g0347 a0001c0001t0001g0349 a0001c0001t0002g0012 a0001c0001t0002g0046 a0001c0001t0002g0285 a0001c0001t0002g0286 a0001c0001t0002g0293 a0001c0001t0002g0294 a0001c0001t0002g0295 a0001c0001t0002g0296 a0001c0001t0002g0303 a0001c0001t0002g0309 a0001c0001t0002g0311 a0001c0001t0002g0314 a0001c0001t0002g0315 a0001c0001t0002g0321 a0001c0001t0002g0324 a0001c0001t0002g0335 a0001c0001t0002g0336 a0001c0001t0002g0345 a0001c0001t0002g0346 a0001c0001t0002g0348 a0001c0001t0002g0350 a0001c0001t0002g0351 a0001c0001t0002g0352 a0001c0001t0003g0338 a0001c0001t0004g0043 a0001c0001t0004g0287 a0001c0001t0004g0289 a0001c0002t0001g0007 a0001c0002t0001g0304 a0001c0002t0001g0313 a0001c0002t0001g0316 a0001c0002t0001g0332 a0001c0002t0001g0337 a0001c0004t0002g0308 a0001c0004t0002g0340 a0002c0003t0001g0323 a0006c0009t0001g0288	94	454	0.2071	-15	c.-53 others(24): Show c.-531_-517delCTTGAGGGAGAGGGC	PTPN7	ENSG00000143851.16	transcript	ENST00000691036.1	protein_coding		407		chr1	TogoVar
PTPRA_chr20_2868481_3043669	2874203	GTCTCCCA others(8): Show GTCTCCCAGGCCCCTC	G G	intron_variant intron_variant	MODIFIER	HG00099.hp1 HG00140.hp2 HG00280.hp1 others(161): Show HG00099.hp1 HG00140.hp2 HG00280.hp1 HG00280.hp2 HG00323.hp2 HG00408.hp2 HG00438.hp1 HG00438.hp2 HG00544.hp1 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00621.hp2 HG00673.hp2 HG00735.hp1 HG00735.hp2 HG01069.hp1 HG01074.hp1 HG01074.hp2 HG01081.hp1 HG01081.hp2 HG01099.hp1 HG01167.hp2 HG01169.hp2 HG01346.hp1 HG01358.hp1 HG01358.hp2 HG01361.hp1 HG01433.hp1 HG01433.hp2 HG01496.hp2 HG01891.hp1 HG01928.hp1 HG01928.hp2 HG01934.hp1 HG01943.hp1 HG01978.hp2 HG02004.hp1 HG02015.hp2 HG02027.hp2 HG02055.hp2 HG02071.hp1 HG02071.hp2 HG02080.hp1 HG02080.hp2 HG02083.hp1 HG02132.hp1 HG02135.hp1 HG02135.hp2 HG02145.hp2 HG02148.hp1 HG02155.hp1 HG02155.hp2 HG02165.hp2 HG02257.hp2 HG02280.hp1 HG02280.hp2 HG02293.hp1 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp2 HG02615.hp2 HG02683.hp1 HG02717.hp1 HG02723.hp2 HG02738.hp1 HG02895.hp1 HG02896.hp1 HG03041.hp2 HG03130.hp2 HG03139.hp2 HG03225.hp1 HG03225.hp2 HG03239.hp2 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03669.hp1 HG03704.hp2 HG03710.hp1 HG03831.hp1 HG03927.hp1 HG03942.hp1 HG03942.hp2 HG04115.hp1 HG04184.hp1 HG04184.hp2 HG04199.hp1 HG04228.hp2 NA18522.hp2 NA18612.hp1 NA18747.hp2 NA18906.hp1 NA18939.hp2 NA18943.hp1 NA18945.hp2 NA18946.hp1 NA18946.hp2 NA18947.hp1 NA18948.hp2 NA18949.hp1 NA18949.hp2 NA18950.hp1 NA18950.hp2 NA18951.hp1 NA18953.hp1 NA18954.hp1 NA18957.hp1 NA18961.hp2 NA18962.hp1 NA18970.hp2 NA18973.hp1 NA18974.hp1 NA18974.hp2 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18979.hp2 NA18980.hp2 NA18981.hp2 NA18982.hp1 NA18984.hp1 NA18986.hp1 NA18986.hp2 NA18988.hp2 NA18991.hp2 NA18995.hp2 NA18998.hp1 NA18998.hp2 NA19002.hp2 NA19004.hp1 NA19004.hp2 NA19006.hp2 NA19007.hp1 NA19011.hp2 NA19012.hp2 NA19043.hp1 NA19057.hp1 NA19057.hp2 NA19058.hp1 NA19058.hp2 NA19062.hp1 NA19062.hp2 NA19064.hp2 NA19065.hp1 NA19065.hp2 NA19066.hp2 NA19079.hp2 NA19081.hp1 NA19082.hp1 NA19083.hp1 NA19085.hp1 NA19087.hp2 NA19091.hp2 NA19240.hp2 NA20129.hp2 NA20752.hp1 NA21309.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0006 a0008	a0001c0001 a0001c0003 a0001c0007 others(9): Show a0001c0001 a0001c0003 a0001c0007 a0001c0008 a0001c0011 a0001c0014 a0001c0016 a0002c0002 a0002c0005 a0003c0009 a0006c0013 a0008c0017	a0001c0001t0001 a0001c0001t0006 a0001c0001t0008 others(11): Show a0001c0001t0001 a0001c0001t0006 a0001c0001t0008 a0001c0003t0001 a0001c0007t0001 a0001c0008t0001 a0001c0011t0001 a0001c0014t0007 a0001c0016t0001 a0002c0002t0001 a0002c0005t0001 a0003c0009t0001 a0006c0013t0001 a0008c0017t0001	a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0013 others(161): Show a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0013 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0017 a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 a0001c0001t0001g0023 a0001c0001t0001g0024 a0001c0001t0001g0025 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0029 a0001c0001t0001g0030 a0001c0001t0001g0031 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0036 a0001c0001t0001g0037 a0001c0001t0001g0038 a0001c0001t0001g0039 a0001c0001t0001g0041 a0001c0001t0001g0045 a0001c0001t0001g0046 a0001c0001t0001g0047 a0001c0001t0001g0053 a0001c0001t0001g0056 a0001c0001t0001g0057 a0001c0001t0001g0058 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0073 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0080 a0001c0001t0001g0081 a0001c0001t0001g0082 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0087 a0001c0001t0001g0088 a0001c0001t0001g0089 a0001c0001t0001g0091 a0001c0001t0001g0092 a0001c0001t0001g0093 a0001c0001t0001g0094 a0001c0001t0001g0095 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0098 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0101 a0001c0001t0001g0102 a0001c0001t0001g0103 a0001c0001t0001g0104 a0001c0001t0001g0105 a0001c0001t0001g0106 a0001c0001t0001g0107 a0001c0001t0001g0108 a0001c0001t0001g0109 a0001c0001t0001g0110 a0001c0001t0001g0111 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0126 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0001t0001g0129 a0001c0001t0001g0130 a0001c0001t0001g0131 a0001c0001t0001g0132 a0001c0001t0001g0133 a0001c0001t0001g0134 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0167 a0001c0001t0001g0354 a0001c0001t0001g0355 a0001c0001t0001g0356 a0001c0001t0006g0074 a0001c0001t0008g0011 a0001c0003t0001g0040 a0001c0003t0001g0043 a0001c0003t0001g0044 a0001c0003t0001g0118 a0001c0007t0001g0147 a0001c0007t0001g0148 a0001c0007t0001g0149 a0001c0007t0001g0150 a0001c0007t0001g0151 a0001c0007t0001g0152 a0001c0007t0001g0153 a0001c0007t0001g0155 a0001c0008t0001g0049 a0001c0008t0001g0050 a0001c0008t0001g0051 a0001c0008t0001g0052 a0001c0008t0001g0054 a0001c0008t0001g0055 a0001c0008t0001g0165 a0001c0011t0001g0014 a0001c0014t0007g0035 a0001c0016t0001g0042 a0002c0002t0001g0145 a0002c0002t0001g0146 a0002c0005t0001g0135 a0002c0005t0001g0136 a0002c0005t0001g0137 a0002c0005t0001g0138 a0002c0005t0001g0139 a0002c0005t0001g0140 a0002c0005t0001g0141 a0002c0005t0001g0142 a0002c0005t0001g0143 a0002c0005t0001g0144 a0002c0005t0001g0159 a0002c0005t0001g0160 a0002c0005t0001g0161 a0002c0005t0001g0162 a0002c0005t0001g0163 a0002c0005t0001g0164 a0002c0005t0001g0166 a0002c0005t0001g0168 a0002c0005t0001g0169 a0002c0005t0001g0170 a0003c0009t0001g0032 a0003c0009t0001g0048 a0006c0013t0001g0090 a0008c0017t0001g0154	164	356	0.4607	-15	c.-12 others(32): Show c.-129+446_-129+460delTCCCAGGCCCCTCTC	PTPRA	ENSG00000132670.21	transcript	ENST00000399903.7	protein_coding	1/23		INFO_REALIGN_3_PRIME	chr20	TogoVar
PTPRA_chr20_2868481_3043669	3008730	AAAAAAAA others(8): Show AAAAAAAAAAAAAAAC	A A	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG02055.hp2 HG02280.hp1 others(17): Show HG01891.hp1 HG02055.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02486.hp1 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02615.hp2 HG02717.hp1 HG02895.hp1 HG03130.hp2 HG03225.hp1 HG03516.hp2 NA18522.hp2 NA18906.hp1 NA19240.hp2 NA20129.hp2 NA21309.hp1	a0002 a0002	a0002c0005 a0002c0005	a0002c0005t0001 a0002c0005t0001	a0002c0005t0001g0135 a0002c0005t0001g0136 a0002c0005t0001g0137 others(17): Show a0002c0005t0001g0135 a0002c0005t0001g0136 a0002c0005t0001g0137 a0002c0005t0001g0138 a0002c0005t0001g0139 a0002c0005t0001g0140 a0002c0005t0001g0141 a0002c0005t0001g0142 a0002c0005t0001g0143 a0002c0005t0001g0144 a0002c0005t0001g0159 a0002c0005t0001g0160 a0002c0005t0001g0161 a0002c0005t0001g0162 a0002c0005t0001g0163 a0002c0005t0001g0164 a0002c0005t0001g0166 a0002c0005t0001g0168 a0002c0005t0001g0169 a0002c0005t0001g0170	20	356	0.0562	-15	c.906 others(32): Show c.906+1328_906+1342delAAAAAAAAAAAACAA	PTPRA	ENSG00000132670.21	transcript	ENST00000399903.7	protein_coding	11/23		INFO_REALIGN_3_PRIME	chr20	TogoVar
PTPRB_chr12_70510870_70642429	70640740	ACTTCTAG others(8): Show ACTTCTAGTTAATGGT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18946.hp2 NA18946.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0075 a0001c0002t0001g0075	1	300	0.0033	-15	c.-33 others(26): Show c.-3360_-3346delACCATTAACTAGAAG	PTPRB	ENSG00000127329.16	transcript	ENST00000334414.11	protein_coding		3312		chr12	TogoVar
PTPRC_chr1_198634040_198762476	198743513	AATACTGG others(8): Show AATACTGGATTCAAAC	A A	intron_variant intron_variant	MODIFIER	HG01496.hp1 HG01496.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0263 a0001c0002t0003g0263	1	296	0.0034	-15	c.269 others(32): Show c.2698-539_2698-525delTACTGGATTCAAACA	PTPRC	ENSG00000081237.21	transcript	ENST00000442510.8	protein_coding	25/32		INFO_REALIGN_3_PRIME	chr1	TogoVar
PTPRD_chr9_8309246_10618002	8581913	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02055.hp2 HG02055.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0009 a0001c0002t0009	a0001c0002t0009g0017 a0001c0002t0009g0017	1	34	0.0294	-15	c.352 others(34): Show c.352+51389_352+51403delTTTTTTTTTTTTTTT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	14/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	9043904	AAAAATAA others(8): Show AAAAATAAAATAAAAT	A A	intron_variant intron_variant	MODIFIER	NA19240.hp1 NA19240.hp1	a0005 a0005	a0005c0016 a0005c0016	a0005c0016t0020 a0005c0016t0020	a0005c0016t0020g0011 a0005c0016t0020g0011	1	34	0.0294	-15	c.-14 others(36): Show c.-142-25184_-142-25170delATTTTATTTTATTTT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	10/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	9384343	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0024 a0001c0001t0024	a0001c0001t0024g0032 a0001c0001t0024g0032	1	34	0.0294	-15	c.-20 others(36): Show c.-203+13091_-203+13105delAAAAAAAAAAAAAAA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	9/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	9504795	TCAGTAAA others(8): Show TCAGTAAAATTACAAG	T T	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG02257.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0018 a0001c0001t0002g0018	1	34	0.0294	-15	c.-23 others(36): Show c.-237+69922_-237+69936delCTTGTAATTTTACTG	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	8/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	9989016	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02559.hp1 HG03139.hp2 NA19240.hp1 others(1): Show HG02559.hp1 HG03139.hp2 NA19240.hp1 NA19240.hp2	a0001 a0005 a0001 a0005	a0001c0002 a0001c0008 a0001c0012 others(1): Show a0001c0002 a0001c0008 a0001c0012 a0005c0016	a0001c0002t0005 a0001c0008t0021 a0001c0012t0005 others(1): Show a0001c0002t0005 a0001c0008t0021 a0001c0012t0005 a0005c0016t0020	a0001c0002t0005g0025 a0001c0008t0021g0002 a0001c0012t0005g0021 others(1): Show a0001c0002t0005g0025 a0001c0008t0021g0002 a0001c0012t0005g0021 a0005c0016t0020g0011	4	34	0.1177	-15	c.-47 others(36): Show c.-472+44687_-472+44701delTTTTTTTTTTTTTTT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	4/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	10060900	CTTTCTTT others(8): Show CTTTCTTTCTTTCTTT	C C	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0001 a0001c0006t0001	a0001c0006t0001g0019 a0001c0006t0001g0019	1	34	0.0294	-15	c.-54 others(36): Show c.-544-27125_-544-27111delAAAGAAAGAAAGAAA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	3/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	10190386	GAAAAAAA others(8): Show GAAAAAAAAAAAAAAA	G G	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01099.hp2 HG01109.hp2 others(8): Show HG01099.hp1 HG01099.hp2 HG01109.hp2 HG02055.hp2 HG02622.hp2 HG02683.hp1 HG03139.hp1 HG03139.hp2 HG03225.hp1 HG03579.hp2 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(2): Show a0001c0001 a0001c0002 a0001c0003 a0001c0013 a0001c0017	a0001c0001t0002 a0001c0001t0014 a0001c0002t0001 others(8): Show a0001c0001t0002 a0001c0001t0014 a0001c0002t0001 a0001c0002t0003 a0001c0002t0005 a0001c0002t0009 a0001c0002t0011 a0001c0002t0015 a0001c0003t0007 a0001c0013t0016 a0001c0017t0002	a0001c0001t0002g0013 a0001c0001t0014g0008 a0001c0002t0001g0009 others(8): Show a0001c0001t0002g0013 a0001c0001t0014g0008 a0001c0002t0001g0009 a0001c0002t0003g0024 a0001c0002t0005g0025 a0001c0002t0009g0017 a0001c0002t0011g0030 a0001c0002t0015g0010 a0001c0003t0007g0029 a0001c0013t0016g0028 a0001c0017t0002g0005	11	34	0.3235	-15	c.-54 others(38): Show c.-545+150562_-545+150576delTTTTTTTTTTTTTTT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	3/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	10205367	CTTTATTT others(8): Show CTTTATTTTATTTTAT	C C	intron_variant intron_variant	MODIFIER	HG01099.hp2 HG01109.hp1 HG02622.hp1 others(3): Show HG01099.hp2 HG01109.hp1 HG02622.hp1 HG03139.hp1 HG03139.hp2 HG03579.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0001c0015	a0001c0001t0002 a0001c0001t0013 a0001c0001t0014 others(3): Show a0001c0001t0002 a0001c0001t0013 a0001c0001t0014 a0001c0002t0005 a0001c0003t0007 a0001c0015t0025	a0001c0001t0002g0013 a0001c0001t0013g0022 a0001c0001t0014g0008 others(3): Show a0001c0001t0002g0013 a0001c0001t0013g0022 a0001c0001t0014g0008 a0001c0002t0005g0025 a0001c0003t0007g0029 a0001c0015t0025g0033	6	34	0.1765	-15	c.-54 others(38): Show c.-545+135581_-545+135595delATAAAATAAAATAAA	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	3/45			chr9	TogoVar
PTPRD_chr9_8309246_10618002	10223670	AAATAATA others(8): Show AAATAATAATAATAAT	A A	intron_variant intron_variant	MODIFIER	HG01981.hp1 HG01981.hp1	a0003 a0003	a0003c0009 a0003c0009	a0003c0009t0008 a0003c0009t0008	a0003c0009t0008g0003 a0003c0009t0008g0003	1	34	0.0294	-15	c.-54 others(38): Show c.-545+117278_-545+117292delATTATTATTATTATT	PTPRD	ENSG00000153707.19	transcript	ENST00000381196.9	protein_coding	3/45			chr9	TogoVar
PTPRE_chr10_127902103_128090855	128010545	CCTTTTCT others(8): Show CCTTTTCTTTTCTTTT	C C	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG03453.hp1 HG02258.hp1 HG03453.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0006 a0001c0001t0001 a0001c0001t0006	a0001c0001t0001g0029 a0001c0001t0006g0209 a0001c0001t0001g0029 a0001c0001t0006g0209	2	304	0.0066	-15	c.-8+ others(32): Show c.-8+28284_-8+28298delTCTTTTCTTTTCTTT	PTPRE	ENSG00000132334.17	transcript	ENST00000254667.8	protein_coding	2/20		INFO_REALIGN_3_PRIME	chr10	TogoVar
PTPRG_chr3_61556571_62302609	61818829	AAATAGTG others(8): Show AAATAGTGAAATAGTG	A A	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG03471.hp2 HG02145.hp1 HG03471.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0004c0006 a0001c0001 a0004c0006	a0001c0001t0001 a0004c0006t0002 a0001c0001t0001 a0004c0006t0002	a0001c0001t0001g0090 a0004c0006t0002g0094 a0001c0001t0001g0090 a0004c0006t0002g0094	2	94	0.0213	-15	c.190 others(34): Show c.190+69910_190+69924delTAGTGAAATAGTGAA	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	2/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61866582	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG03471.hp2 HG03471.hp2	a0004 a0004	a0004c0006 a0004c0006	a0004c0006t0002 a0004c0006t0002	a0004c0006t0002g0094 a0004c0006t0002g0094	1	94	0.0106	-15	c.190 others(36): Show c.190+117622_190+117636delTTTTTTTTTTTTTTT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	2/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61871118	ATGTTATG others(8): Show ATGTTATGTTATGTTG	A A	intron_variant intron_variant	MODIFIER	NA18998.hp2 NA18998.hp2	a0002 a0002	a0002c0003 a0002c0003	a0002c0003t0002 a0002c0003t0002	a0002c0003t0002g0052 a0002c0003t0002g0052	1	94	0.0106	-15	c.191 others(36): Show c.191-118502_191-118488delATGTTATGTTGTGTT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	2/29		INFO_REALIGN_3_PRIME	chr3	TogoVar
PTPRG_chr3_61556571_62302609	61871153	GTGTTGTG others(8): Show GTGTTGTGTTGTGTTA	G G	intron_variant intron_variant	MODIFIER	HG02976.hp1 HG03540.hp2 HG02976.hp1 HG03540.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0003 a0001c0001t0002g0035 a0001c0001t0001g0003 a0001c0001t0002g0035	2	94	0.0213	-15	c.191 others(36): Show c.191-118467_191-118453delGTGTTGTGTTATGTT	PTPRG	ENSG00000144724.20	transcript	ENST00000474889.6	protein_coding	2/29		INFO_REALIGN_3_PRIME	chr3	TogoVar

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