Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
SVEP1_chr9_110360248_110584741	110506316	CATGACTA others(8): Show CATGACTAAAACACCA	C C	intron_variant intron_variant	MODIFIER	HG01993.hp2 HG01993.hp2	a0073 a0073	a0073c0119 a0073c0119	a0073c0119t0002 a0073c0119t0002	a0073c0119t0002g0263 a0073c0119t0002g0263	1	360	0.0028	-15	c.130 others(34): Show c.1304-3114_1304-3100delTGGTGTTTTAGTCAT		SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	5/47						chr9	TogoVar
SVEP1_chr9_110360248_110584741	110511487	CCTTTTTT others(8): Show CCTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	NA18949.hp2 NA19062.hp2 NA19090.hp1 NA18949.hp2 NA19062.hp2 NA19090.hp1	a0006 a0019 a0109 a0006 a0019 a0109	a0006c0003 a0019c0015 a0109c0125 a0006c0003 a0019c0015 a0109c0125	a0006c0003t0002 a0019c0015t0002 a0109c0125t0001 a0006c0003t0002 a0019c0015t0002 a0109c0125t0001	a0006c0003t0002g0150 a0019c0015t0002g0329 a0109c0125t0001g0141 a0006c0003t0002g0150 a0019c0015t0002g0329 a0109c0125t0001g0141	3	262	0.0115	-15	c.130 others(34): Show c.1303+1424_1303+1438delAAAAAAAAAAAAAAG		SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	5/47						chr9	TogoVar
SVEP1_chr9_110360248_110584741	110511488	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02886.hp2 HG03098.hp2 HG02280.hp2 HG02886.hp2 HG03098.hp2	a0001 a0007 a0089 a0001 a0007 a0089	a0001c0053 a0007c0080 a0089c0145 a0001c0053 a0007c0080 a0089c0145	a0001c0053t0001 a0007c0080t0004 a0089c0145t0001 a0001c0053t0001 a0007c0080t0004 a0089c0145t0001	a0001c0053t0001g0123 a0007c0080t0004g0122 a0089c0145t0001g0301 a0001c0053t0001g0123 a0007c0080t0004g0122 a0089c0145t0001g0301	3	123	0.0244	-15	c.130 others(34): Show c.1303+1423_1303+1437delAAAAAAAAAAAAAAA		SVEP1	ENSG00000165124.19	transcript	ENST00000374469.6	protein_coding	5/47						chr9	TogoVar
SVIL_chr10_29452338_29639971	29572779	AAAGAAAA others(8): Show AAAGAAAAAGAAAAAG	A A	intron_variant intron_variant	MODIFIER	HG03688.hp2 HG03688.hp2	a0043 a0043	a0043c0076 a0043c0076	a0043c0076t0001 a0043c0076t0001	a0043c0076t0001g0249 a0043c0076t0001g0249	1	288	0.0035	-15	c.-20 others(34): Show c.-200-3482_-200-3468delCTTTTTCTTTTTCTT		SVIL	ENSG00000197321.16	transcript	ENST00000355867.9	protein_coding	1/37						chr10	TogoVar
SVIL_chr10_29452338_29639971	29582731	CTAATAAT others(8): Show CTAATAATAATAATAA	C C	intron_variant intron_variant	MODIFIER	HG02602.hp2 HG02602.hp2	a0001 a0001	a0001c0035 a0001c0035	a0001c0035t0001 a0001c0035t0001	a0001c0035t0001g0043 a0001c0035t0001g0043	1	112	0.0089	-15	c.-20 others(36): Show c.-200-13434_-200-13420delTTATTATTATTATTA		SVIL	ENSG00000197321.16	transcript	ENST00000355867.9	protein_coding	1/37						chr10	TogoVar
SVOPL_chr7_138589285_138706362	138684779	TGAAATCA others(8): Show TGAAATCAGTTATCTC	T T	intron_variant intron_variant	MODIFIER	NA18992.hp2 NA18992.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0340 a0001c0001t0001g0340	1	358	0.0028	-15	c.-34 others(32): Show c.-34-5715_-34-5701delGAGATAACTGATTTC		SVOPL	ENSG00000157703.16	transcript	ENST00000674285.1	protein_coding	1/15						chr7	TogoVar
SVOPL_chr7_138589285_138706362	138686414	AAAAAAAA others(8): Show AAAAAAAAAAAAAAAG	A A	intron_variant intron_variant	MODIFIER	HG03834.hp1 HG03834.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0295 a0001c0001t0001g0295	1	358	0.0028	-15	c.-34 others(32): Show c.-34-7350_-34-7336delCTTTTTTTTTTTTTT		SVOPL	ENSG00000157703.16	transcript	ENST00000674285.1	protein_coding	1/15						chr7	TogoVar
SVOP_chr12_108902741_109026068	108907098	ACTCCTCC others(8): Show ACTCCTCCTCCTTCTC	A A	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01074.hp1 HG01074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0137 a0001c0001t0001g0137	1	200	0.0050	-15	c.54 others(26): Show c.5422_*5436delGAGAAGGAGGAGGAG		SVOP	ENSG00000166111.10	transcript	ENST00000610966.5	protein_coding					642		chr12	TogoVar
SVOP_chr12_108902741_109026068	108946690	TTTATTAT others(8): Show TTTATTATTATTATTA	T T	intron_variant intron_variant	MODIFIER	HG01255.hp1 HG01891.hp2 HG02735.hp2 others(1): Show HG01255.hp1 HG01891.hp2 HG02735.hp2 HG02818.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0002 a0001c0001t0044 a0001c0002t0001 others(1): Show a0001c0001t0002 a0001c0001t0044 a0001c0002t0001 a0001c0002t0045	a0001c0001t0002g0158 a0001c0001t0044g0043 a0001c0002t0001g0281 others(1): Show a0001c0001t0002g0158 a0001c0001t0044g0043 a0001c0002t0001g0281 a0001c0002t0045g0004	4	44	0.0909	-15	c.579 others(32): Show c.579-1539_579-1525delTAATAATAATAATAA		SVOP	ENSG00000166111.10	transcript	ENST00000610966.5	protein_coding	6/15						chr12	TogoVar
SVOP_chr12_108902741_109026068	108982672	TATCATCA others(8): Show TATCATCACCATCATC	T T	intron_variant intron_variant	MODIFIER	HG00544.hp2 HG00642.hp2 HG00738.hp1 others(52): Show HG00544.hp2 HG00642.hp2 HG00738.hp1 HG01081.hp2 HG01123.hp2 HG01243.hp2 HG01361.hp1 HG01891.hp1 HG02055.hp1 HG02155.hp1 HG02258.hp2 HG02615.hp1 HG02630.hp1 HG02698.hp1 HG02723.hp1 HG02896.hp2 HG02897.hp1 HG02976.hp2 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03139.hp1 HG03195.hp2 HG03209.hp2 HG03471.hp1 HG03486.hp2 HG03490.hp2 HG03688.hp1 HG03688.hp2 HG06807.hp2 NA18747.hp1 NA18939.hp1 NA18947.hp1 NA18953.hp1 NA18954.hp2 NA18960.hp2 NA18971.hp2 NA18972.hp2 NA18981.hp1 NA18984.hp1 NA18988.hp1 NA18994.hp2 NA18998.hp2 NA19000.hp2 NA19002.hp1 NA19064.hp1 NA19066.hp2 NA19067.hp1 NA19074.hp1 NA19082.hp2 NA19084.hp1 NA19085.hp1 NA19088.hp2 NA19240.hp1 NA20129.hp2	a0001 a0001	a0001c0002 a0001c0004 a0001c0006 a0001c0002 a0001c0004 a0001c0006	a0001c0002t0001 a0001c0002t0002 a0001c0002t0005 others(25): Show a0001c0002t0001 a0001c0002t0002 a0001c0002t0005 a0001c0002t0006 a0001c0002t0010 a0001c0002t0012 a0001c0002t0013 a0001c0002t0014 a0001c0002t0015 a0001c0002t0020 a0001c0002t0023 a0001c0002t0024 a0001c0002t0029 a0001c0002t0032 a0001c0002t0033 a0001c0002t0034 a0001c0002t0039 a0001c0002t0040 a0001c0002t0046 a0001c0002t0061 a0001c0002t0072 a0001c0002t0074 a0001c0002t0082 a0001c0002t0084 a0001c0004t0011 a0001c0004t0016 a0001c0004t0018 a0001c0006t0001	a0001c0002t0001g0097 a0001c0002t0001g0169 a0001c0002t0001g0189 others(52): Show a0001c0002t0001g0097 a0001c0002t0001g0169 a0001c0002t0001g0189 a0001c0002t0001g0197 a0001c0002t0001g0201 a0001c0002t0001g0202 a0001c0002t0001g0206 a0001c0002t0001g0207 a0001c0002t0001g0215 a0001c0002t0001g0227 a0001c0002t0001g0229 a0001c0002t0001g0282 a0001c0002t0001g0283 a0001c0002t0002g0163 a0001c0002t0002g0194 a0001c0002t0002g0195 a0001c0002t0002g0200 a0001c0002t0002g0204 a0001c0002t0002g0219 a0001c0002t0002g0223 a0001c0002t0005g0190 a0001c0002t0005g0217 a0001c0002t0005g0218 a0001c0002t0006g0235 a0001c0002t0010g0174 a0001c0002t0010g0191 a0001c0002t0012g0251 a0001c0002t0013g0167 a0001c0002t0014g0175 a0001c0002t0014g0178 a0001c0002t0014g0180 a0001c0002t0015g0160 a0001c0002t0020g0179 a0001c0002t0023g0183 a0001c0002t0023g0234 a0001c0002t0024g0237 a0001c0002t0029g0231 a0001c0002t0032g0177 a0001c0002t0033g0198 a0001c0002t0033g0199 a0001c0002t0034g0284 a0001c0002t0034g0285 a0001c0002t0039g0013 a0001c0002t0040g0012 a0001c0002t0046g0029 a0001c0002t0061g0159 a0001c0002t0072g0233 a0001c0002t0074g0264 a0001c0002t0082g0216 a0001c0002t0084g0208 a0001c0004t0011g0187 a0001c0004t0011g0203 a0001c0004t0016g0165 a0001c0004t0018g0228 a0001c0006t0001g0205	55	286	0.1923	-15	c.196 others(30): Show c.196+914_196+928delGATGATGGTGATGAT		SVOP	ENSG00000166111.10	transcript	ENST00000610966.5	protein_coding	2/15						chr12	TogoVar
SVOP_chr12_108902741_109026068	109004702	TATTTCAT others(8): Show TATTTCATTTCATTTC	T T	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG03130.hp2 HG03516.hp2 HG02559.hp2 HG03130.hp2 HG03516.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0020 a0001c0001t0067 a0001c0002t0023 a0001c0001t0020 a0001c0001t0067 a0001c0002t0023	a0001c0001t0020g0181 a0001c0001t0067g0182 a0001c0002t0023g0183 a0001c0001t0020g0181 a0001c0001t0067g0182 a0001c0002t0023g0183	3	25	0.1200	-15	c.35+ others(32): Show c.35+16117_35+16131delGAAATGAAATGAAAT		SVOP	ENSG00000166111.10	transcript	ENST00000610966.5	protein_coding	1/15						chr12	TogoVar
SWAP70_chr11_9659077_9757993	9671572	ATAGAAAT others(8): Show ATAGAAATATATTTCT	A A	intron_variant intron_variant	MODIFIER	NA19086.hp1 NA19086.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0004 a0001c0003t0004	a0001c0003t0004g0256 a0001c0003t0004g0256	1	292	0.0034	-15	c.99+ others(30): Show c.99+7295_99+7309delTAGAAATATATTTCT		SWAP70	ENSG00000133789.15	transcript	ENST00000318950.11	protein_coding	1/11						chr11	TogoVar
SWI5_chr9_128271276_128293989	128291978	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG03490.hp1 HG03492.hp1 HG03490.hp1 HG03492.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0002 a0001c0001t0001g0015 a0001c0001t0001g0002 a0001c0001t0001g0015	2	4	0.5000	-15	c.32 others(26): Show c.3263_*3277delAAAAAAAAAAAAAAA		SWI5	ENSG00000175854.15	transcript	ENST00000418976.3	protein_coding					2990		chr9	TogoVar
SWT1_chr1_185152167_185296781	185176286	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG00408.hp2 HG00544.hp2 others(21): Show HG00323.hp1 HG00408.hp2 HG00544.hp2 HG00558.hp2 HG00609.hp2 HG01106.hp1 HG01192.hp1 HG01257.hp1 HG01978.hp1 HG02080.hp1 HG02165.hp1 HG02293.hp1 HG03927.hp1 NA18942.hp2 NA18943.hp1 NA18946.hp2 NA18949.hp1 NA18951.hp2 NA18961.hp1 NA18977.hp2 NA18992.hp1 NA18999.hp1 NA19000.hp2 NA19079.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0189 a0003c0003t0001g0190 a0003c0003t0001g0191 others(21): Show a0003c0003t0001g0189 a0003c0003t0001g0190 a0003c0003t0001g0191 a0003c0003t0001g0192 a0003c0003t0001g0193 a0003c0003t0001g0194 a0003c0003t0001g0195 a0003c0003t0001g0196 a0003c0003t0001g0197 a0003c0003t0001g0198 a0003c0003t0001g0199 a0003c0003t0001g0200 a0003c0003t0001g0201 a0003c0003t0001g0202 a0003c0003t0001g0203 a0003c0003t0001g0204 a0003c0003t0001g0205 a0003c0003t0001g0206 a0003c0003t0001g0207 a0003c0003t0001g0208 a0003c0003t0001g0209 a0003c0003t0001g0210 a0003c0003t0001g0219 a0003c0003t0001g0221	24	97	0.2474	-15	c.966 others(32): Show c.966+1187_966+1201delAAAAAAAAAAAAAAA		SWT1	ENSG00000116668.13	transcript	ENST00000367500.9	protein_coding	5/18					INFO_REALIGN_3_PRIME	chr1	TogoVar
SWT1_chr1_185152167_185296781	185194577	AAAAAAAG others(8): Show AAAAAAAGTCTTTTAT	A A	intron_variant intron_variant	MODIFIER	NA19072.hp2 NA19072.hp2	a0005 a0005	a0005c0007 a0005c0007	a0005c0007t0001 a0005c0007t0001	a0005c0007t0001g0312 a0005c0007t0001g0312	1	324	0.0031	-15	c.152 others(34): Show c.1523+3936_1523+3950delAAAAAAGTCTTTTAT		SWT1	ENSG00000116668.13	transcript	ENST00000367500.9	protein_coding	10/18						chr1	TogoVar
SYAP1_chrX_16714612_16770340	16741100	GAAGGCCA others(8): Show GAAGGCCATGATGTTC	G G	intron_variant intron_variant	MODIFIER	NA18974.hp1 NA18974.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0051 a0001c0001t0008g0051	1	288	0.0035	-15	c.362 others(30): Show c.362-614_362-600delAGGCCATGATGTTCA		SYAP1	ENSG00000169895.6	transcript	ENST00000380155.4	protein_coding	3/8					INFO_REALIGN_3_PRIME	chrX	TogoVar
SYBU_chr8_109568978_109649822	109582644	TATCATCA others(8): Show TATCATCATCATCGTC	T T	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0059 a0001c0001t0001g0059	1	322	0.0031	-15	c.531 others(32): Show c.531-2657_531-2643delGACGATGATGATGAT		SYBU	ENSG00000147642.17	transcript	ENST00000276646.14	protein_coding	4/6						chr8	TogoVar
SYCP2L_chr6_10882052_10979309	10888066	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG00323.hp1 HG01496.hp2 HG01884.hp1 others(6): Show HG00323.hp1 HG01496.hp2 HG01884.hp1 HG02630.hp2 HG02717.hp1 HG02723.hp2 HG03195.hp1 HG03516.hp1 NA18522.hp2	a0001 a0002 a0004 others(1): Show a0001 a0002 a0004 a0013	a0001c0001 a0002c0003 a0002c0021 others(2): Show a0001c0001 a0002c0003 a0002c0021 a0004c0005 a0013c0026	a0001c0001t0001 a0001c0001t0002 a0002c0003t0001 others(3): Show a0001c0001t0001 a0001c0001t0002 a0002c0003t0001 a0002c0021t0001 a0004c0005t0002 a0013c0026t0001	a0001c0001t0001g0142 a0001c0001t0001g0144 a0001c0001t0002g0143 others(6): Show a0001c0001t0001g0142 a0001c0001t0001g0144 a0001c0001t0002g0143 a0002c0003t0001g0011 a0002c0003t0001g0326 a0002c0003t0001g0327 a0002c0021t0001g0010 a0004c0005t0002g0145 a0013c0026t0001g0006	9	11	0.8182	-15	c.9+9 others(26): Show c.9+965_9+979delTTTTTTTTTTTTTTT		SYCP2L	ENSG00000153157.14	transcript	ENST00000283141.11	protein_coding	1/29					INFO_REALIGN_3_PRIME	chr6	TogoVar
SYCP2_chr20_59858571_59938637	59876369	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00423.hp1 HG03669.hp2 others(1): Show HG00280.hp2 HG00423.hp1 HG03669.hp2 NA18953.hp2	a0001 a0012 a0001 a0012	a0001c0001 a0012c0018 a0001c0001 a0012c0018	a0001c0001t0001 a0012c0018t0001 a0001c0001t0001 a0012c0018t0001	a0001c0001t0001g0068 a0001c0001t0001g0179 a0001c0001t0001g0230 others(1): Show a0001c0001t0001g0068 a0001c0001t0001g0179 a0001c0001t0001g0230 a0012c0018t0001g0106	4	29	0.1379	-15	c.315 others(32): Show c.3151-915_3151-901delTTTTTTTTTTTTTTT		SYCP2	ENSG00000196074.13	transcript	ENST00000357552.8	protein_coding	33/44						chr20	TogoVar
SYCP2_chr20_59858571_59938637	59905820	AAAGATGT others(8): Show AAAGATGTCCACTTTT	A A	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01192.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0151 a0001c0001t0001g0151	1	274	0.0036	-15	c.103 others(34): Show c.1033+1529_1033+1543delAAAAGTGGACATCTT		SYCP2	ENSG00000196074.13	transcript	ENST00000357552.8	protein_coding	15/44						chr20	TogoVar
SYK_chr9_90796819_90903549	90876296	AAAAAAAA others(8): Show AAAAAAAAAAAGAAAG	A A	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00558.hp2 HG00597.hp1 others(73): Show HG00438.hp1 HG00558.hp2 HG00597.hp1 HG00639.hp2 HG01496.hp1 HG01516.hp2 HG02027.hp1 HG02055.hp1 HG02056.hp2 HG02071.hp1 HG02083.hp1 HG02155.hp2 HG02280.hp2 HG02523.hp1 HG02559.hp1 HG02572.hp1 HG02683.hp2 HG02723.hp1 HG02735.hp1 HG02738.hp2 HG02809.hp1 HG02818.hp2 HG02895.hp2 HG02896.hp2 HG02897.hp1 HG02897.hp2 HG03017.hp1 HG03139.hp1 HG03209.hp1 HG03239.hp2 HG03492.hp2 HG03579.hp2 HG03834.hp2 HG06807.hp1 NA18747.hp1 NA18940.hp1 NA18942.hp1 NA18943.hp2 NA18944.hp1 NA18947.hp1 NA18951.hp1 NA18953.hp2 NA18954.hp2 NA18957.hp1 NA18962.hp1 NA18964.hp2 NA18967.hp2 NA18969.hp2 NA18971.hp1 NA18971.hp2 NA18973.hp1 NA18973.hp2 NA18975.hp1 NA18975.hp2 NA18979.hp1 NA18980.hp1 NA18982.hp1 NA18992.hp2 NA18995.hp1 NA18995.hp2 NA19000.hp1 NA19001.hp1 NA19002.hp2 NA19003.hp1 NA19004.hp1 NA19004.hp2 NA19056.hp1 NA19060.hp1 NA19062.hp2 NA19065.hp1 NA19066.hp1 NA19066.hp2 NA19080.hp2 NA19082.hp2 NA19090.hp1 NA20129.hp2	a0001 a0003 a0001 a0003	a0001c0001 a0001c0004 a0001c0014 others(1): Show a0001c0001 a0001c0004 a0001c0014 a0003c0015	a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 others(17): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0012 a0001c0001t0014 a0001c0001t0015 a0001c0001t0024 a0001c0001t0036 a0001c0001t0050 a0001c0001t0053 a0001c0001t0054 a0001c0001t0056 a0001c0001t0064 a0001c0001t0065 a0001c0001t0072 a0001c0004t0001 a0001c0004t0012 a0001c0014t0013 a0003c0015t0001	a0001c0001t0001g0037 a0001c0001t0001g0040 a0001c0001t0001g0056 others(73): Show a0001c0001t0001g0037 a0001c0001t0001g0040 a0001c0001t0001g0056 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0078 a0001c0001t0001g0079 a0001c0001t0001g0097 a0001c0001t0001g0100 a0001c0001t0001g0106 a0001c0001t0001g0109 a0001c0001t0001g0137 a0001c0001t0001g0143 a0001c0001t0001g0151 a0001c0001t0001g0181 a0001c0001t0001g0185 a0001c0001t0001g0200 a0001c0001t0001g0202 a0001c0001t0001g0207 a0001c0001t0001g0252 a0001c0001t0001g0263 a0001c0001t0001g0264 a0001c0001t0001g0271 a0001c0001t0001g0273 a0001c0001t0001g0276 a0001c0001t0001g0283 a0001c0001t0001g0287 a0001c0001t0001g0289 a0001c0001t0001g0292 a0001c0001t0001g0293 a0001c0001t0001g0302 a0001c0001t0001g0306 a0001c0001t0001g0309 a0001c0001t0001g0311 a0001c0001t0001g0312 a0001c0001t0001g0318 a0001c0001t0001g0320 a0001c0001t0001g0321 a0001c0001t0001g0342 a0001c0001t0005g0006 a0001c0001t0005g0041 a0001c0001t0005g0051 a0001c0001t0005g0085 a0001c0001t0005g0120 a0001c0001t0005g0142 a0001c0001t0005g0251 a0001c0001t0005g0280 a0001c0001t0005g0291 a0001c0001t0005g0335 a0001c0001t0005g0344 a0001c0001t0005g0353 a0001c0001t0005g0354 a0001c0001t0006g0322 a0001c0001t0007g0268 a0001c0001t0012g0303 a0001c0001t0012g0351 a0001c0001t0012g0371 a0001c0001t0014g0266 a0001c0001t0014g0307 a0001c0001t0015g0246 a0001c0001t0015g0323 a0001c0001t0015g0338 a0001c0001t0024g0187 a0001c0001t0024g0204 a0001c0001t0036g0336 a0001c0001t0050g0367 a0001c0001t0053g0261 a0001c0001t0054g0222 a0001c0001t0056g0141 a0001c0001t0064g0153 a0001c0001t0065g0299 a0001c0001t0072g0145 a0001c0004t0001g0331 a0001c0004t0012g0170 a0001c0014t0013g0233 a0003c0015t0001g0144	76	374	0.2032	-15	c.118 others(34): Show c.1182-1271_1182-1257delAAAAAAAGAAAGAAA		SYK	ENSG00000165025.15	transcript	ENST00000375754.9	protein_coding	9/13					INFO_REALIGN_3_PRIME	chr9	TogoVar
SYMPK_chr19_45810410_45868147	45811743	GTATTATT others(8): Show GTATTATTATTATTAT	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02622.hp2 HG02886.hp2 HG02622.hp2 HG02886.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0069 a0001c0001t0001g0071 a0001c0001t0001g0069 a0001c0001t0001g0071	2	232	0.0086	-15	c.38 others(26): Show c.3802_*3816delATAATAATAATAATA		SYMPK	ENSG00000125755.19	transcript	ENST00000245934.12	protein_coding					3666		chr19	TogoVar
SYN1_chrX_47566901_47624857	47588798	GGGGTCAC others(8): Show GGGGTCACAGCCATGT	G G	intron_variant intron_variant	MODIFIER	NA18964.hp1 NA18964.hp2 NA18964.hp1 NA18964.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0119 a0001c0001t0001g0124 a0001c0001t0001g0119 a0001c0001t0001g0124	2	280	0.0071	-15	c.775 others(34): Show c.775-11312_775-11298delACATGGCTGTGACCC		SYN1	ENSG00000008056.14	transcript	ENST00000295987.13	protein_coding	5/12						chrX	TogoVar
SYN1_chrX_47566901_47624857	47619396	GGCTCCCC others(8): Show GGCTCCCCCGCGGCCT	G G	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	NA18942.hp1 NA18942.hp1	a0004 a0004	a0004c0012 a0004c0012	a0004c0012t0001 a0004c0012t0001	a0004c0012t0001g0257 a0004c0012t0001g0257	1	280	0.0036	-15	c.318 others(22): Show c.318_332delAGGCCGCGGGGGAGC	p.Gly others(13): Show p.Gly107_Ala111del	SYN1	ENSG00000008056.14	transcript	ENST00000295987.13	protein_coding	1/13	461/3210	318/2118	106/705			chrX	TogoVar
SYN2_chr3_11999388_12197032	12050711	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01192.hp2 HG01361.hp1 HG03130.hp2 others(1): Show HG01192.hp2 HG01361.hp1 HG03130.hp2 NA19043.hp2	a0002 a0004 a0002 a0004	a0002c0002 a0004c0004 a0002c0002 a0004c0004	a0002c0002t0001 a0002c0002t0015 a0004c0004t0004 a0002c0002t0001 a0002c0002t0015 a0004c0004t0004	a0002c0002t0001g0003 a0002c0002t0001g0152 a0002c0002t0015g0119 others(1): Show a0002c0002t0001g0003 a0002c0002t0001g0152 a0002c0002t0015g0119 a0004c0004t0004g0244	4	7	0.5714	-15	c.377 others(34): Show c.377+45804_377+45818delTTTTTTTTTTTTTTT		SYN2	ENSG00000157152.17	transcript	ENST00000621198.5	protein_coding	1/12					INFO_REALIGN_3_PRIME	chr3	TogoVar
SYN3_chr22_32502820_33063381	32610565	TTTTTGTT others(8): Show TTTTTGTTTTGTTTTG	T T	intron_variant intron_variant	MODIFIER	HG01099.hp1 HG01192.hp1 HG01884.hp2 others(29): Show HG01099.hp1 HG01192.hp1 HG01884.hp2 HG02145.hp1 HG02257.hp1 HG02280.hp1 HG02280.hp2 HG02559.hp1 HG02572.hp1 HG02622.hp2 HG02630.hp2 HG02647.hp2 HG02717.hp1 HG02723.hp2 HG02818.hp1 HG02965.hp1 HG02970.hp2 HG02976.hp2 HG03041.hp2 HG03098.hp2 HG03130.hp2 HG03209.hp2 HG03471.hp1 HG03486.hp1 HG03516.hp1 HG04184.hp2 NA18906.hp1 NA18906.hp2 NA19030.hp1 NA19030.hp2 NA19043.hp2 NA21309.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0001c0004 others(1): Show a0001c0001 a0001c0003 a0001c0004 a0002c0002	a0001c0001t0001 a0001c0001t0005 a0001c0001t0009 others(22): Show a0001c0001t0001 a0001c0001t0005 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0014 a0001c0001t0016 a0001c0001t0018 a0001c0001t0019 a0001c0001t0020 a0001c0001t0021 a0001c0001t0024 a0001c0001t0038 a0001c0001t0041 a0001c0001t0042 a0001c0001t0044 a0001c0001t0053 a0001c0001t0069 a0001c0003t0004 a0001c0003t0037 a0001c0004t0017 a0001c0004t0056 a0002c0002t0004 a0002c0002t0023 a0002c0002t0048	a0001c0001t0001g0097 a0001c0001t0005g0158 a0001c0001t0009g0067 others(29): Show a0001c0001t0001g0097 a0001c0001t0005g0158 a0001c0001t0009g0067 a0001c0001t0009g0090 a0001c0001t0010g0166 a0001c0001t0011g0109 a0001c0001t0014g0060 a0001c0001t0014g0099 a0001c0001t0016g0145 a0001c0001t0018g0106 a0001c0001t0018g0146 a0001c0001t0019g0030 a0001c0001t0020g0022 a0001c0001t0021g0149 a0001c0001t0024g0147 a0001c0001t0038g0038 a0001c0001t0041g0096 a0001c0001t0042g0088 a0001c0001t0044g0077 a0001c0001t0053g0041 a0001c0001t0069g0126 a0001c0003t0004g0040 a0001c0003t0004g0105 a0001c0003t0037g0103 a0001c0004t0017g0055 a0001c0004t0056g0021 a0002c0002t0004g0059 a0002c0002t0004g0110 a0002c0002t0004g0140 a0002c0002t0004g0167 a0002c0002t0023g0164 a0002c0002t0048g0084	32	79	0.4051	-15	c.712 others(34): Show c.712-13844_712-13830delCAAAACAAAACAAAA		SYN3	ENSG00000185666.16	transcript	ENST00000358763.7	protein_coding	6/13						chr22	TogoVar
SYN3_chr22_32502820_33063381	32676528	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG01358.hp1 HG02723.hp1 HG02723.hp2 others(2): Show HG01358.hp1 HG02723.hp1 HG02723.hp2 NA19063.hp1 NA19088.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0024 a0001c0001t0058 a0001c0001t0062 others(2): Show a0001c0001t0024 a0001c0001t0058 a0001c0001t0062 a0001c0001t0067 a0001c0004t0017	a0001c0001t0024g0065 a0001c0001t0058g0180 a0001c0001t0062g0181 others(2): Show a0001c0001t0024g0065 a0001c0001t0058g0180 a0001c0001t0062g0181 a0001c0001t0067g0050 a0001c0004t0017g0055	5	18	0.2778	-15	c.712 others(34): Show c.712-79807_712-79793delAAAAAAAAAAAAAAA		SYN3	ENSG00000185666.16	transcript	ENST00000358763.7	protein_coding	6/13						chr22	TogoVar
SYN3_chr22_32502820_33063381	32807299	TATATATA others(8): Show TATATATAAATATATA	T T	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG03209.hp2 HG02647.hp1 HG03209.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0163 a0002c0002t0004g0167 a0002c0002t0004g0163 a0002c0002t0004g0167	2	184	0.0109	-15	c.711 others(34): Show c.711+57601_711+57615delTATATATTTATATAT		SYN3	ENSG00000185666.16	transcript	ENST00000358763.7	protein_coding	6/13						chr22	TogoVar
SYN3_chr22_32502820_33063381	32825657	CAAAAAAA others(8): Show CAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG02145.hp2 HG02717.hp2 HG03130.hp2 others(4): Show HG02145.hp2 HG02717.hp2 HG03130.hp2 HG03209.hp1 HG03579.hp2 NA19043.hp1 NA19240.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0004 a0002c0002 a0001c0001 a0001c0004 a0002c0002	a0001c0001t0003 a0001c0001t0014 a0001c0001t0021 others(4): Show a0001c0001t0003 a0001c0001t0014 a0001c0001t0021 a0001c0004t0036 a0002c0002t0004 a0002c0002t0023 a0002c0002t0046	a0001c0001t0003g0107 a0001c0001t0014g0060 a0001c0001t0021g0063 others(4): Show a0001c0001t0003g0107 a0001c0001t0014g0060 a0001c0001t0021g0063 a0001c0004t0036g0010 a0002c0002t0004g0154 a0002c0002t0023g0119 a0002c0002t0046g0101	7	12	0.5833	-15	c.711 others(34): Show c.711+39243_711+39257delTTTTTTTTTTTTTTT		SYN3	ENSG00000185666.16	transcript	ENST00000358763.7	protein_coding	6/13						chr22	TogoVar
SYN3_chr22_32502820_33063381	32842217	GATCACTT others(8): Show GATCACTTCTCCAGTT	G G	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01261.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0026 a0001c0001t0026	a0001c0001t0026g0171 a0001c0001t0026g0171	1	184	0.0054	-15	c.711 others(34): Show c.711+22683_711+22697delAACTGGAGAAGTGAT		SYN3	ENSG00000185666.16	transcript	ENST00000358763.7	protein_coding	6/13						chr22	TogoVar
SYN3_chr22_32502820_33063381	33028643	ATGGTGGT others(8): Show ATGGTGGTGGTGGTGG	A A	intron_variant intron_variant	MODIFIER	HG01884.hp1 HG02055.hp2 HG02622.hp1 others(3): Show HG01884.hp1 HG02055.hp2 HG02622.hp1 HG02630.hp2 HG03209.hp2 NA20129.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0003 a0001c0001t0009 a0001c0001t0010 others(3): Show a0001c0001t0003 a0001c0001t0009 a0001c0001t0010 a0002c0002t0004 a0002c0002t0011 a0002c0002t0071	a0001c0001t0003g0169 a0001c0001t0009g0170 a0001c0001t0010g0166 others(3): Show a0001c0001t0003g0169 a0001c0001t0009g0170 a0001c0001t0010g0166 a0002c0002t0004g0167 a0002c0002t0011g0165 a0002c0002t0071g0155	6	142	0.0423	-15	c.-16 others(36): Show c.-162-21834_-162-21820delCCACCACCACCACCA		SYN3	ENSG00000185666.16	transcript	ENST00000358763.7	protein_coding	1/13						chr22	TogoVar
SYN3_chr22_32502820_33063381	33028676	GTGGTGGT others(8): Show GTGGTGGTGGTGGTGA	G G	intron_variant intron_variant	MODIFIER	HG01884.hp2 HG02895.hp2 HG02965.hp1 others(3): Show HG01884.hp2 HG02895.hp2 HG02965.hp1 HG03831.hp2 NA19043.hp1 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0003 a0002c0002 a0001c0001 a0001c0003 a0002c0002	a0001c0001t0001 a0001c0001t0014 a0001c0003t0005 others(3): Show a0001c0001t0001 a0001c0001t0014 a0001c0003t0005 a0001c0003t0037 a0002c0002t0011 a0002c0002t0046	a0001c0001t0001g0035 a0001c0001t0014g0099 a0001c0003t0005g0102 others(3): Show a0001c0001t0001g0035 a0001c0001t0014g0099 a0001c0003t0005g0102 a0001c0003t0037g0103 a0002c0002t0011g0100 a0002c0002t0046g0101	6	183	0.0328	-15	c.-16 others(36): Show c.-162-21867_-162-21853delTCACCACCACCACCA		SYN3	ENSG00000185666.16	transcript	ENST00000358763.7	protein_coding	1/13						chr22	TogoVar
SYNC_chr1_32674906_32707770	32678567	CTTTTTTT others(8): Show CTTTTTTTTTTTTTTT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00423.hp2 HG01981.hp2 HG02055.hp2 others(10): Show HG00423.hp2 HG01981.hp2 HG02055.hp2 HG02293.hp2 HG02451.hp1 HG02647.hp2 HG02717.hp2 HG03471.hp2 HG03579.hp1 HG04115.hp1 NA18979.hp2 NA18994.hp1 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0001c0001t0004 a0002c0002t0003 a0001c0001t0002 a0001c0001t0004 a0002c0002t0003	a0001c0001t0002g0024 a0001c0001t0004g0037 a0001c0001t0004g0230 others(8): Show a0001c0001t0002g0024 a0001c0001t0004g0037 a0001c0001t0004g0230 a0001c0001t0004g0235 a0001c0001t0004g0237 a0001c0001t0004g0240 a0002c0002t0003g0035 a0002c0002t0003g0215 a0002c0002t0003g0217 a0002c0002t0003g0221 a0002c0002t0003g0223	13	16	0.8125	-15	c.32 others(26): Show c.3268_*3282delAAAAAAAAAAAAAAA		SYNC	ENSG00000162520.15	transcript	ENST00000409190.8	protein_coding					1338		chr1	TogoVar
SYNE1_chr6_152116687_152642362	152186582	AAAAAAAA others(8): Show AAAAAAAAAAAAAAAG	A A	intron_variant intron_variant	MODIFIER	NA18994.hp2 NA18994.hp2	a0002 a0002	a0002c0056 a0002c0056	a0002c0056t0005 a0002c0056t0005	a0002c0056t0005g0102 a0002c0056t0005g0102	1	172	0.0058	-15	c.233 others(36): Show c.23301+2655_23301+2669delCTTTTTTTTTTTTTT		SYNE1	ENSG00000131018.25	transcript	ENST00000367255.10	protein_coding	128/145						chr6	TogoVar
SYNE1_chr6_152116687_152642362	152188975	AAAAAAAA others(8): Show AAAAAAAAAAATATAT	A A	intron_variant intron_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0062 a0062	a0062c0040 a0062c0040	a0062c0040t0002 a0062c0040t0002	a0062c0040t0002g0025 a0062c0040t0002g0025	1	165	0.0061	-15	c.233 others(34): Show c.23301+262_23301+276delATATATTTTTTTTTT		SYNE1	ENSG00000131018.25	transcript	ENST00000367255.10	protein_coding	128/145						chr6	TogoVar
SYNE1_chr6_152116687_152642362	152371845	CAGGAAAG others(8): Show CAGGAAAGGAAAGGAA	C C	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG01069.hp1 HG01071.hp1 others(19): Show HG00558.hp2 HG01069.hp1 HG01071.hp1 HG01433.hp1 HG01433.hp2 HG01981.hp2 HG02071.hp1 HG02080.hp1 HG02083.hp2 HG02132.hp1 HG02132.hp2 HG02280.hp1 HG03486.hp1 HG03516.hp1 HG04184.hp1 NA18951.hp1 NA18957.hp1 NA18991.hp2 NA18995.hp1 NA19043.hp2 NA19087.hp1 NA19088.hp2	a0001 a0008 a0009 others(13): Show a0001 a0008 a0009 a0010 a0013 a0014 a0015 a0017 a0019 a0024 a0051 a0059 a0091 a0094 a0114 a0117	a0001c0008 a0001c0138 a0001c0140 others(16): Show a0001c0008 a0001c0138 a0001c0140 a0008c0085 a0008c0086 a0009c0007 a0010c0006 a0013c0124 a0014c0001 a0015c0131 a0017c0045 a0019c0004 a0024c0123 a0051c0044 a0059c0121 a0091c0013 a0094c0157 a0114c0139 a0117c0120	a0001c0008t0007 a0001c0138t0006 a0001c0140t0006 others(16): Show a0001c0008t0007 a0001c0138t0006 a0001c0140t0006 a0008c0085t0005 a0008c0086t0007 a0009c0007t0009 a0010c0006t0006 a0013c0124t0003 a0014c0001t0001 a0015c0131t0002 a0017c0045t0007 a0019c0004t0006 a0024c0123t0007 a0051c0044t0003 a0059c0121t0004 a0091c0013t0004 a0094c0157t0015 a0114c0139t0019 a0117c0120t0001	a0001c0008t0007g0151 a0001c0008t0007g0153 a0001c0138t0006g0147 others(19): Show a0001c0008t0007g0151 a0001c0008t0007g0153 a0001c0138t0006g0147 a0001c0140t0006g0152 a0008c0085t0005g0109 a0008c0086t0007g0149 a0009c0007t0009g0122 a0010c0006t0006g0146 a0013c0124t0003g0105 a0014c0001t0001g0077 a0014c0001t0001g0078 a0015c0131t0002g0118 a0017c0045t0007g0140 a0019c0004t0006g0160 a0019c0004t0006g0161 a0024c0123t0007g0138 a0051c0044t0003g0030 a0059c0121t0004g0115 a0091c0013t0004g0054 a0094c0157t0015g0007 a0114c0139t0019g0144 a0117c0120t0001g0116	22	111	0.1982	-15	c.950 others(34): Show c.9507+1177_9507+1191delTTCCTTTCCTTTCCT		SYNE1	ENSG00000131018.25	transcript	ENST00000367255.10	protein_coding	59/145						chr6	TogoVar
SYNE1_chr6_152116687_152642362	152371910	AAGGAAAG others(8): Show AAGGAAAGGAAAGGAC	A A	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG03225.hp1 HG01167.hp1 HG03225.hp1	a0039 a0087 a0039 a0087	a0039c0012 a0087c0141 a0039c0012 a0087c0141	a0039c0012t0002 a0087c0141t0001 a0039c0012t0002 a0087c0141t0001	a0039c0012t0002g0066 a0087c0141t0001g0114 a0039c0012t0002g0066 a0087c0141t0001g0114	2	149	0.0134	-15	c.950 others(34): Show c.9507+1112_9507+1126delGTCCTTTCCTTTCCT		SYNE1	ENSG00000131018.25	transcript	ENST00000367255.10	protein_coding	59/145						chr6	TogoVar
SYNE1_chr6_152116687_152642362	152371915	AAGGAAAG others(8): Show AAGGAAAGGACAGGAC	A A	intron_variant intron_variant	MODIFIER	HG02976.hp2 HG06807.hp1 NA19043.hp1 HG02976.hp2 HG06807.hp1 NA19043.hp1	a0079 a0098 a0116 a0079 a0098 a0116	a0079c0165 a0098c0018 a0116c0014 a0079c0165 a0098c0018 a0116c0014	a0079c0165t0002 a0098c0018t0001 a0116c0014t0004 a0079c0165t0002 a0098c0018t0001 a0116c0014t0004	a0079c0165t0002g0055 a0098c0018t0001g0098 a0116c0014t0004g0053 a0079c0165t0002g0055 a0098c0018t0001g0098 a0116c0014t0004g0053	3	163	0.0184	-15	c.950 others(34): Show c.9507+1107_9507+1121delGTCCTGTCCTTTCCT		SYNE1	ENSG00000131018.25	transcript	ENST00000367255.10	protein_coding	59/145						chr6	TogoVar
SYNE1_chr6_152116687_152642362	152371920	AAGGACAG others(8): Show AAGGACAGGACAGGAC	A A	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03453.hp1 NA18979.hp2 HG03041.hp1 HG03453.hp1 NA18979.hp2	a0080 a0089 a0113 a0080 a0089 a0113	a0080c0050 a0089c0107 a0113c0082 a0080c0050 a0089c0107 a0113c0082	a0080c0050t0002 a0089c0107t0004 a0113c0082t0011 a0080c0050t0002 a0089c0107t0004 a0113c0082t0011	a0080c0050t0002g0036 a0089c0107t0004g0013 a0113c0082t0011g0060 a0080c0050t0002g0036 a0089c0107t0004g0013 a0113c0082t0011g0060	3	159	0.0189	-15	c.950 others(34): Show c.9507+1102_9507+1116delGTCCTGTCCTGTCCT		SYNE1	ENSG00000131018.25	transcript	ENST00000367255.10	protein_coding	59/145						chr6	TogoVar
SYNE1_chr6_152116687_152642362	152377631	AAAAAAAA others(8): Show AAAAAAAAAAATATAT	A A	intron_variant intron_variant	MODIFIER	HG02109.hp1 HG03225.hp2 HG02109.hp1 HG03225.hp2	a0053 a0088 a0053 a0088	a0053c0069 a0088c0029 a0053c0069 a0088c0029	a0053c0069t0004 a0088c0029t0003 a0053c0069t0004 a0088c0029t0003	a0053c0069t0004g0010 a0088c0029t0003g0039 a0053c0069t0004g0010 a0088c0029t0003g0039	2	168	0.0119	-15	c.901 others(32): Show c.9010-734_9010-720delATATATTTTTTTTTT		SYNE1	ENSG00000131018.25	transcript	ENST00000367255.10	protein_coding	56/145						chr6	TogoVar
SYNE1_chr6_152116687_152642362	152377633	AAAAAAAA others(8): Show AAAAAAAAATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02897.hp1 HG02965.hp1 HG03516.hp2 HG02897.hp1 HG02965.hp1 HG03516.hp2	a0021 a0074 a0021 a0074	a0021c0070 a0021c0073 a0074c0052 a0021c0070 a0021c0073 a0074c0052	a0021c0070t0014 a0021c0073t0001 a0074c0052t0001 a0021c0070t0014 a0021c0073t0001 a0074c0052t0001	a0021c0070t0014g0003 a0021c0073t0001g0086 a0074c0052t0001g0069 a0021c0070t0014g0003 a0021c0073t0001g0086 a0074c0052t0001g0069	3	167	0.0180	-15	c.901 others(32): Show c.9010-736_9010-722delATATATATTTTTTTT		SYNE1	ENSG00000131018.25	transcript	ENST00000367255.10	protein_coding	56/145						chr6	TogoVar
SYNE1_chr6_152116687_152642362	152377635	AAAAAAAT others(8): Show AAAAAAATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02630.hp2 HG03453.hp1 NA20129.hp1 HG02630.hp2 HG03453.hp1 NA20129.hp1	a0066 a0089 a0124 a0066 a0089 a0124	a0066c0071 a0089c0107 a0124c0037 a0066c0071 a0089c0107 a0124c0037	a0066c0071t0002 a0089c0107t0004 a0124c0037t0001 a0066c0071t0002 a0089c0107t0004 a0124c0037t0001	a0066c0071t0002g0006 a0089c0107t0004g0013 a0124c0037t0001g0058 a0066c0071t0002g0006 a0089c0107t0004g0013 a0124c0037t0001g0058	3	172	0.0174	-15	c.901 others(32): Show c.9010-738_9010-724delATATATATATTTTTT		SYNE1	ENSG00000131018.25	transcript	ENST00000367255.10	protein_coding	56/145						chr6	TogoVar
SYNE1_chr6_152116687_152642362	152411655	CTGAGCAC others(8): Show CTGAGCACAGTGCCTA	C C	intron_variant intron_variant	MODIFIER	HG03139.hp2 NA18906.hp2 HG03139.hp2 NA18906.hp2	a0086 a0100 a0086 a0100	a0086c0049 a0100c0026 a0086c0049 a0100c0026	a0086c0049t0001 a0100c0026t0001 a0086c0049t0001 a0100c0026t0001	a0086c0049t0001g0001 a0100c0026t0001g0067 a0086c0049t0001g0001 a0100c0026t0001g0067	2	172	0.0116	-15	c.623 others(34): Show c.6230+1682_6230+1696delTAGGCACTGTGCTCA		SYNE1	ENSG00000131018.25	transcript	ENST00000367255.10	protein_coding	42/145						chr6	TogoVar
SYNE1_chr6_152116687_152642362	152629537	GAGGGGGA others(8): Show GAGGGGGAGGGGAGGA	G G	intron_variant intron_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0021 a0021	a0021c0070 a0021c0070	a0021c0070t0014 a0021c0070t0014	a0021c0070t0014g0003 a0021c0070t0014g0003	1	170	0.0059	-15	c.-22 others(32): Show c.-223-998_-223-984delTCCTCCCCTCCCCCT		SYNE1	ENSG00000131018.25	transcript	ENST00000367255.10	protein_coding	2/145						chr6	TogoVar
SYNE2_chr14_63848004_64231433	63924832	GTGTTTTT others(8): Show GTGTTTTTTTTTTTTT	G G	intron_variant intron_variant	MODIFIER	HG04204.hp1 HG04204.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0003 a0002c0001t0003	a0002c0001t0003g0122 a0002c0001t0003g0122	1	51	0.0196	-15	c.79+ others(32): Show c.79+15607_79+15621delGTTTTTTTTTTTTTT		SYNE2	ENSG00000054654.20	transcript	ENST00000555002.6	protein_coding	2/115					INFO_REALIGN_3_PRIME	chr14	TogoVar
SYNE2_chr14_63848004_64231433	64100524	AAAAAAAA others(8): Show AAAAAAAAATATATAT	A A	intron_variant intron_variant	MODIFIER	HG04204.hp2 HG04204.hp2	a0057 a0057	a0057c0066 a0057c0066	a0057c0066t0004 a0057c0066t0004	a0057c0066t0004g0076 a0057c0066t0004g0076	1	148	0.0068	-15	c.123 others(36): Show c.12382-1406_12382-1392delAAAAAAATATATATA		SYNE2	ENSG00000054654.20	transcript	ENST00000555002.6	protein_coding	63/115					INFO_REALIGN_3_PRIME	chr14	TogoVar
SYNE2_chr14_63848004_64231433	64100528	AAAAATAT others(8): Show AAAAATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG01167.hp2 HG01167.hp2	a0030 a0030	a0030c0064 a0030c0064	a0030c0064t0002 a0030c0064t0002	a0030c0064t0002g0106 a0030c0064t0002g0106	1	148	0.0068	-15	c.123 others(36): Show c.12382-1402_12382-1388delAAATATATATATATA		SYNE2	ENSG00000054654.20	transcript	ENST00000555002.6	protein_coding	63/115					INFO_REALIGN_3_PRIME	chr14	TogoVar
SYNE3_chr14_95402266_95521650	95432633	CTATTATT others(8): Show CTATTATTATTATTAT	C C	intron_variant intron_variant	MODIFIER	HG00544.hp1 NA18945.hp2 NA19057.hp1 HG00544.hp1 NA18945.hp2 NA19057.hp1	a0003 a0004 a0003 a0004	a0003c0004 a0004c0003 a0004c0035 a0003c0004 a0004c0003 a0004c0035	a0003c0004t0133 a0004c0003t0004 a0004c0035t0107 a0003c0004t0133 a0004c0003t0004 a0004c0035t0107	a0003c0004t0133g0145 a0004c0003t0004g0169 a0004c0035t0107g0172 a0003c0004t0133g0145 a0004c0003t0004g0169 a0004c0035t0107g0172	3	173	0.0173	-15	c.268 others(32): Show c.2689-531_2689-517delATAATAATAATAATA		SYNE3	ENSG00000176438.13	transcript	ENST00000682763.1	protein_coding	16/17						chr14	TogoVar
SYNE3_chr14_95402266_95521650	95488697	GGAGGAGA others(8): Show GGAGGAGAGGAGAGGA	G G	intron_variant intron_variant	MODIFIER	NA18981.hp1 NA18981.hp1	a0003 a0003	a0003c0004 a0003c0004	a0003c0004t0009 a0003c0004t0009	a0003c0004t0009g0327 a0003c0004t0009g0327	1	105	0.0095	-15	c.-14 others(34): Show c.-14-12877_-14-12863delTCCTCTCCTCTCCTC		SYNE3	ENSG00000176438.13	transcript	ENST00000682763.1	protein_coding	1/17						chr14	TogoVar
SYNGAP1_chr6_33415065_33458689	33440986	GGGCAGGG others(8): Show GGGCAGGGCAGGGAGT	G G	intron_variant intron_variant	MODIFIER	HG00639.hp1 HG00642.hp1 HG01168.hp2 others(16): Show HG00639.hp1 HG00642.hp1 HG01168.hp2 HG01175.hp1 HG01192.hp1 HG01255.hp1 HG01257.hp1 HG01346.hp2 HG02040.hp1 HG02148.hp2 HG03654.hp1 HG03704.hp1 NA18948.hp2 NA18961.hp2 NA18966.hp2 NA19009.hp1 NA19011.hp1 NA19058.hp1 NA20805.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0005 a0001c0001 a0001c0002 a0001c0005	a0001c0001t0001 a0001c0002t0001 a0001c0005t0001 a0001c0001t0001 a0001c0002t0001 a0001c0005t0001	a0001c0001t0001g0028 a0001c0001t0001g0063 a0001c0001t0001g0064 others(13): Show a0001c0001t0001g0028 a0001c0001t0001g0063 a0001c0001t0001g0064 a0001c0001t0001g0065 a0001c0002t0001g0002 a0001c0005t0001g0026 a0001c0005t0001g0027 a0001c0005t0001g0054 a0001c0005t0001g0055 a0001c0005t0001g0056 a0001c0005t0001g0057 a0001c0005t0001g0058 a0001c0005t0001g0059 a0001c0005t0001g0060 a0001c0005t0001g0061 a0001c0005t0001g0062	19	306	0.0621	-15	c.191 others(30): Show c.1913+45_1913+59delAGGGAGTGGCAGGGC		SYNGAP1	ENSG00000197283.18	transcript	ENST00000646630.1	protein_coding	11/18					INFO_REALIGN_3_PRIME	chr6	TogoVar

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