Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
PCDH15_chr10_53816099_54806231	53851671	AATATATA others(11): Show AATATATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02280.hp2 NA18906.hp1 others(1): Show HG02280.hp1 HG02280.hp2 NA18906.hp1 NA19043.hp1	a0002 a0006 a0002 a0006	a0002c0002 a0006c0008 a0002c0002 a0006c0008	a0002c0002t0002 a0002c0002t0009 a0002c0002t0010 others(1): Show a0002c0002t0002 a0002c0002t0009 a0002c0002t0010 a0006c0008t0001	a0002c0002t0002g0038 a0002c0002t0009g0031 a0002c0002t0010g0060 others(1): Show a0002c0002t0002g0038 a0002c0002t0009g0031 a0002c0002t0010g0060 a0006c0008t0001g0043	4	94	0.0426	-18	c.380 others(37): Show c.3806+5486_3806+5503delATATATATATATATATAT	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	28/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	53918713	AACACACA others(11): Show AACACACACACACACACAC	A A	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03209.hp1 HG03041.hp1 HG03209.hp1	a0001 a0021 a0001 a0021	a0001c0007 a0021c0011 a0001c0007 a0021c0011	a0001c0007t0001 a0021c0011t0001 a0001c0007t0001 a0021c0011t0001	a0001c0007t0001g0090 a0021c0011t0001g0078 a0001c0007t0001g0090 a0021c0011t0001g0078	2	94	0.0213	-18	c.337 others(39): Show c.3374-15361_3374-15344delGTGTGTGTGTGTGTGTGT	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	25/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	53945837	GTATATAT others(11): Show GTATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0019 a0019	a0019c0027 a0019c0027	a0019c0027t0008 a0019c0027t0008	a0019c0027t0008g0039 a0019c0027t0008g0039	1	94	0.0106	-18	c.312 others(37): Show c.3123-4880_3123-4863delTATATATATATATATATA	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	23/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54077690	ATAAGTCA others(11): Show ATAAGTCAAGTTCTTCAAT	A A	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG06807.hp1 HG03130.hp1 HG06807.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0071 a0002c0002t0002g0089 a0002c0002t0002g0071 a0002c0002t0002g0089	2	94	0.0213	-18	c.209 others(37): Show c.2091+1623_2091+1640delATTGAAGAACTTGACTTA	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	17/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54105277	GATATATA others(11): Show GATATATATATATATATAT	G G	intron_variant intron_variant	MODIFIER	HG03209.hp2 HG03209.hp2	a0006 a0006	a0006c0008 a0006c0008	a0006c0008t0001 a0006c0008t0001	a0006c0008t0001g0027 a0006c0008t0001g0027	1	94	0.0106	-18	c.191 others(39): Show c.1918-15232_1918-15215delATATATATATATATATAT	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	15/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54174680	CTTTCTTT others(11): Show CTTTCTTTTTTCTTTTTCT	C C	intron_variant intron_variant	MODIFIER	HG03041.hp1 HG03041.hp1	a0001 a0001	a0001c0007 a0001c0007	a0001c0007t0001 a0001c0007t0001	a0001c0007t0001g0090 a0001c0007t0001g0090	1	94	0.0106	-18	c.159 others(37): Show c.1590+8746_1590+8763delAGAAAAAGAAAAAAGAAA	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	13/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54234132	CTGTGTGT others(11): Show CTGTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02280.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0010 a0002c0002t0010	a0002c0002t0010g0060 a0002c0002t0010g0060	1	94	0.0106	-18	c.985 others(35): Show c.985+2673_985+2690delCACACACACACACACACA	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	9/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54242128	TTTTATAT others(11): Show TTTTATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG01192.hp2 HG02145.hp1 others(3): Show HG00642.hp2 HG01192.hp2 HG02145.hp1 HG03579.hp2 HG03710.hp2 NA19043.hp1	a0002 a0005 a0010 others(2): Show a0002 a0005 a0010 a0013 a0028	a0002c0002 a0002c0006 a0005c0046 others(3): Show a0002c0002 a0002c0006 a0005c0046 a0010c0014 a0013c0034 a0028c0039	a0002c0002t0009 a0002c0006t0005 a0005c0046t0001 others(3): Show a0002c0002t0009 a0002c0006t0005 a0005c0046t0001 a0010c0014t0001 a0013c0034t0003 a0028c0039t0001	a0002c0002t0009g0031 a0002c0006t0005g0074 a0005c0046t0001g0065 others(3): Show a0002c0002t0009g0031 a0002c0006t0005g0074 a0005c0046t0001g0065 a0010c0014t0001g0069 a0013c0034t0003g0013 a0028c0039t0001g0093	6	94	0.0638	-18	c.877 others(35): Show c.877-5215_877-5198delTATATATATATATATAAA	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	8/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54316529	TACACACA others(11): Show TACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0002 a0003c0003t0002	a0003c0003t0002g0005 a0003c0003t0002g0005	1	94	0.0106	-18	c.876 others(33): Show c.876+724_876+741delGTGTGTGTGTGTGTGTGT	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	8/32			chr10	TogoVar
PCDH15_chr10_53816099_54806231	54442414	CTATATAT others(11): Show CTATATATATATATATATA	C C	intron_variant intron_variant	MODIFIER	HG03225.hp2 HG03486.hp1 HG03225.hp2 HG03486.hp1	a0022 a0023 a0022 a0023	a0022c0033 a0023c0032 a0022c0033 a0023c0032	a0022c0033t0001 a0023c0032t0001 a0022c0033t0001 a0023c0032t0001	a0022c0033t0001g0073 a0023c0032t0001g0072 a0022c0033t0001g0073 a0023c0032t0001g0072	2	94	0.0213	-18	c.158 others(37): Show c.158-63490_158-63473delTATATATATATATATATA	PCDH15	ENSG00000150275.20	transcript	ENST00000320301.11	protein_coding	3/32			chr10	TogoVar
PCDH17_chr13_57626744_57734311	57650218	TTGTGTGT others(11): Show TTGTGTGTGTGTGTGTGTG	T T	intron_variant intron_variant	MODIFIER	HG01109.hp2 HG01109.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0039 a0001c0001t0039	a0001c0001t0039g0267 a0001c0001t0039g0267	1	310	0.0032	-18	c.256 others(39): Show c.2565+15133_2565+15150delGTGTGTGTGTGTGTGTGT	PCDH17	ENSG00000118946.12	transcript	ENST00000377918.8	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr13	TogoVar
PCDH19_chrX_100286644_100415273	100333185	GAAAGAAA others(11): Show GAAAGAAAGAAAGAAAGAA	G G	intron_variant intron_variant	MODIFIER	NA20129.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0119 a0001c0001t0002g0119	1	281	0.0036	-18	c.284 others(37): Show c.2848+8700_2848+8717delTTCTTTCTTTCTTTCTTT	PCDH19	ENSG00000165194.15	transcript	ENST00000373034.8	protein_coding	5/5			chrX	TogoVar
PCDH19_chrX_100286644_100415273	100393497	TACACACA others(11): Show TACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG02257.hp2 HG03195.hp2 HG02257.hp2 HG03195.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0011 a0001c0001t0011	a0001c0001t0011g0140 a0001c0001t0011g0141 a0001c0001t0011g0140 a0001c0001t0011g0141	2	281	0.0071	-18	c.261 others(37): Show c.2616+9009_2616+9026delGTGTGTGTGTGTGTGTGT	PCDH19	ENSG00000165194.15	transcript	ENST00000373034.8	protein_coding	3/5			chrX	TogoVar
PCDH19_chrX_100286644_100415273	100409709	TCCGCCGC others(11): Show TCCGCCGCCGCCGCCGCCG	T T	5_prime_UTR_variant 5_prime_UTR_variant	MODIFIER	HG03516.hp2 HG03516.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0024 a0001c0002t0024	a0001c0002t0024g0002 a0001c0002t0024g0002	1	281	0.0036	-18	c.-11 others(29): Show c.-1130_-1113delCGGCGGCGGCGGCGGCGG	PCDH19	ENSG00000165194.15	transcript	ENST00000373034.8	protein_coding	1/6	1113		chrX	TogoVar
PCDH19_chrX_100286644_100415273	100410693	CATATATA others(11): Show CATATATATACACATATAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18612.hp1 NA18612.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0220 a0001c0001t0001g0220	1	281	0.0036	-18	c.-21 others(29): Show c.-2114_-2097delATATATGTGTATATATAT	PCDH19	ENSG00000165194.15	transcript	ENST00000373034.8	protein_coding		421		chrX	TogoVar
PCDH7_chr4_30715369_31151800	30790806	CCCAGCTC others(11): Show CCCAGCTCTCAGGAGGCTG	C C	intron_variant intron_variant	MODIFIER	HG00738.hp1 HG00738.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0171 a0001c0001t0009g0171	1	214	0.0047	-18	c.317 others(39): Show c.3174+66211_3174+66228delCCAGCTCTCAGGAGGCTG	PCDH7	ENSG00000169851.16	transcript	ENST00000695919.1	protein_coding	1/2			chr4	TogoVar
PCDH7_chr4_30715369_31151800	30894516	TACACACA others(11): Show TACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG03195.hp1 NA19240.hp1 HG03195.hp1 NA19240.hp1	a0001 a0001	a0001c0006 a0001c0006	a0001c0006t0001 a0001c0006t0001	a0001c0006t0001g0211 a0001c0006t0001g0212 a0001c0006t0001g0211 a0001c0006t0001g0212	2	214	0.0094	-18	c.317 others(39): Show c.3175-25611_3175-25594delCACACACACACACACACA	PCDH7	ENSG00000169851.16	transcript	ENST00000695919.1	protein_coding	1/2		INFO_REALIGN_3_PRIME	chr4	TogoVar
PCDH7_chr4_30715369_31151800	30968376	CTATATAT others(11): Show CTATATATATATATATATA	C C	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG03041.hp1 HG02647.hp1 HG03041.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0021 a0001c0003t0048 a0001c0001t0021 a0001c0003t0048	a0001c0001t0021g0107 a0001c0003t0048g0007 a0001c0001t0021g0107 a0001c0003t0048g0007	2	214	0.0094	-18	c.339 others(39): Show c.3391+48029_3391+48046delATATATATATATATATAT	PCDH7	ENSG00000169851.16	transcript	ENST00000695919.1	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr4	TogoVar
PCDH7_chr4_30715369_31151800	31079309	GATATATA others(11): Show GATATATATATATATATAT	G G	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG01975.hp1 NA18953.hp1 HG00741.hp2 HG01975.hp1 NA18953.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0013 a0001c0001t0003 a0001c0001t0013	a0001c0001t0003g0077 a0001c0001t0013g0179 a0001c0001t0013g0201 a0001c0001t0003g0077 a0001c0001t0013g0179 a0001c0001t0013g0201	3	214	0.0140	-18	c.339 others(39): Show c.3392-63126_3392-63109delTATATATATATATATATA	PCDH7	ENSG00000169851.16	transcript	ENST00000695919.1	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr4	TogoVar
PCDH7_chr4_30715369_31151800	31108369	TAAAAAAA others(11): Show TAAAAAAAAAAAAAAAAAA	T T	intron_variant intron_variant	MODIFIER	HG02145.hp1 HG02145.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0031 a0001c0001t0031	a0001c0001t0031g0170 a0001c0001t0031g0170	1	214	0.0047	-18	c.339 others(39): Show c.3392-34081_3392-34064delAAAAAAAAAAAAAAAAAA	PCDH7	ENSG00000169851.16	transcript	ENST00000695919.1	protein_coding	2/2		INFO_REALIGN_3_PRIME	chr4	TogoVar
PCDH9_chr13_66297834_67235336	66717472	AAAAAAAA others(11): Show AAAAAAAAAATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02717.hp1 HG02717.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0072 a0001c0001t0003g0072	1	80	0.0125	-18	c.313 others(39): Show c.3139-86079_3139-86062delATATATATATTTTTTTTT	PCDH9	ENSG00000184226.15	transcript	ENST00000377865.7	protein_coding	3/4			chr13	TogoVar
PCDH9_chr13_66297834_67235336	66717474	AAAAAAAA others(11): Show AAAAAAAATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00438.hp1 HG02738.hp2 HG00099.hp2 HG00438.hp1 HG02738.hp2	a0001 a0001	a0001c0001 a0001c0002 a0001c0003 a0001c0001 a0001c0002 a0001c0003	a0001c0001t0003 a0001c0002t0004 a0001c0003t0010 a0001c0001t0003 a0001c0002t0004 a0001c0003t0010	a0001c0001t0003g0056 a0001c0002t0004g0022 a0001c0003t0010g0025 a0001c0001t0003g0056 a0001c0002t0004g0022 a0001c0003t0010g0025	3	80	0.0375	-18	c.313 others(39): Show c.3139-86081_3139-86064delATATATATATATTTTTTT	PCDH9	ENSG00000184226.15	transcript	ENST00000377865.7	protein_coding	3/4			chr13	TogoVar
PCDH9_chr13_66297834_67235336	66717476	AAAAAATA others(11): Show AAAAAATATATATATATAT	A A	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02622.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0013 a0001c0001t0013	a0001c0001t0013g0069 a0001c0001t0013g0069	1	80	0.0125	-18	c.313 others(39): Show c.3139-86083_3139-86066delATATATATATATATTTTT	PCDH9	ENSG00000184226.15	transcript	ENST00000377865.7	protein_coding	3/4			chr13	TogoVar
PCDH9_chr13_66297834_67235336	66770411	GTAGTATG others(11): Show GTAGTATGCCCAAAAGTCT	G G	intron_variant intron_variant	MODIFIER	HG00642.hp2 HG02132.hp1 HG03195.hp1 others(3): Show HG00642.hp2 HG02132.hp1 HG03195.hp1 HG03239.hp1 NA18950.hp1 NA19030.hp1	a0001 a0001	a0001c0001 a0001c0002 a0001c0001 a0001c0002	a0001c0001t0001 a0001c0001t0003 a0001c0001t0016 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0016 a0001c0002t0002	a0001c0001t0001g0066 a0001c0001t0001g0073 a0001c0001t0003g0070 others(3): Show a0001c0001t0001g0066 a0001c0001t0001g0073 a0001c0001t0003g0070 a0001c0001t0016g0080 a0001c0002t0002g0021 a0001c0002t0002g0023	6	80	0.0750	-18	c.313 others(41): Show c.3138+133075_3138+133092delAGACTTTTGGGCATACTA	PCDH9	ENSG00000184226.15	transcript	ENST00000377865.7	protein_coding	3/4			chr13	TogoVar
PCDH9_chr13_66297834_67235336	66824303	GTATATAT others(11): Show GTATATATATATATATATA	G G	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00438.hp1 HG00741.hp2 others(17): Show HG00099.hp2 HG00438.hp1 HG00741.hp2 HG01109.hp1 HG01109.hp2 HG01175.hp1 HG01496.hp1 HG01496.hp2 HG02132.hp2 HG02630.hp2 HG02738.hp1 HG02738.hp2 HG02970.hp1 HG03486.hp2 HG03579.hp2 HG03927.hp1 HG04204.hp1 HG06807.hp2 NA18906.hp2 NA18950.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0001c0002 a0001c0003 others(1): Show a0001c0001 a0001c0002 a0001c0003 a0002c0005	a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 others(9): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0006 a0001c0001t0012 a0001c0001t0015 a0001c0002t0002 a0001c0002t0003 a0001c0002t0004 a0001c0003t0001 a0001c0003t0003 a0001c0003t0010 a0002c0005t0002	a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0055 others(17): Show a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0055 a0001c0001t0001g0064 a0001c0001t0003g0056 a0001c0001t0003g0059 a0001c0001t0006g0061 a0001c0001t0012g0058 a0001c0001t0015g0050 a0001c0002t0002g0011 a0001c0002t0002g0017 a0001c0002t0002g0019 a0001c0002t0003g0047 a0001c0002t0004g0008 a0001c0002t0004g0022 a0001c0003t0001g0031 a0001c0003t0001g0034 a0001c0003t0003g0046 a0001c0003t0010g0025 a0002c0005t0002g0007	20	80	0.2500	-18	c.313 others(39): Show c.3138+79183_3138+79200delTATATATATATATATATA	PCDH9	ENSG00000184226.15	transcript	ENST00000377865.7	protein_coding	3/4			chr13	TogoVar
PCDHA1_chr5_140781140_141017347	140838075	ATAGTGTG others(11): Show ATAGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02559.hp2 HG02602.hp2 HG02451.hp1 HG02559.hp2 HG02602.hp2	a0001 a0009 a0001 a0009	a0001c0001 a0009c0009 a0001c0001 a0009c0009	a0001c0001t0001 a0001c0001t0008 a0009c0009t0001 a0001c0001t0001 a0001c0001t0008 a0009c0009t0001	a0001c0001t0001g0092 a0001c0001t0008g0089 a0009c0009t0001g0028 a0001c0001t0001g0092 a0001c0001t0008g0089 a0009c0009t0001g0028	3	200	0.0150	-18	c.239 others(39): Show c.2394+49392_2394+49409delTAGTGTGTGTGTGTGTGT	PCDHA1	ENSG00000204970.10	transcript	ENST00000504120.4	protein_coding	1/3			chr5	TogoVar
PCDHA1_chr5_140781140_141017347	140838077	AGTGTGTG others(11): Show AGTGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	NA18975.hp2 NA18975.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0160 a0002c0002t0001g0160	1	200	0.0050	-18	c.239 others(39): Show c.2394+49430_2394+49447delGTGTGTGTGTGTGTGTGT	PCDHA1	ENSG00000204970.10	transcript	ENST00000504120.4	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA2_chr5_140789852_141017347	140838075	ATAGTGTG others(11): Show ATAGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02559.hp1 HG02602.hp2 HG02451.hp1 HG02559.hp1 HG02602.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0007 a0001c0001t0001 a0001c0001t0007	a0001c0001t0001g0024 a0001c0001t0001g0110 a0001c0001t0007g0111 a0001c0001t0001g0024 a0001c0001t0001g0110 a0001c0001t0007g0111	3	202	0.0149	-18	c.238 others(39): Show c.2388+40724_2388+40741delTAGTGTGTGTGTGTGTGT	PCDHA2	ENSG00000204969.7	transcript	ENST00000526136.2	protein_coding	1/3			chr5	TogoVar
PCDHA2_chr5_140789852_141017347	140838077	AGTGTGTG others(11): Show AGTGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	NA18975.hp2 NA18975.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0175 a0002c0002t0001g0175	1	202	0.0050	-18	c.238 others(39): Show c.2388+40762_2388+40779delGTGTGTGTGTGTGTGTGT	PCDHA2	ENSG00000204969.7	transcript	ENST00000526136.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA3_chr5_140796057_141017347	140838075	ATAGTGTG others(11): Show ATAGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02559.hp1 HG02602.hp2 HG02451.hp2 HG02559.hp1 HG02602.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0008 a0001c0001t0001 a0001c0001t0008	a0001c0001t0001g0048 a0001c0001t0001g0090 a0001c0001t0008g0092 a0001c0001t0001g0048 a0001c0001t0001g0090 a0001c0001t0008g0092	3	208	0.0144	-18	c.239 others(39): Show c.2394+34485_2394+34502delTAGTGTGTGTGTGTGTGT	PCDHA3	ENSG00000255408.4	transcript	ENST00000522353.3	protein_coding	1/3			chr5	TogoVar
PCDHA3_chr5_140796057_141017347	140838077	AGTGTGTG others(11): Show AGTGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	NA18975.hp1 NA18975.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0176 a0002c0002t0002g0176	1	208	0.0048	-18	c.239 others(39): Show c.2394+34523_2394+34540delGTGTGTGTGTGTGTGTGT	PCDHA3	ENSG00000255408.4	transcript	ENST00000522353.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA4_chr5_140802068_141017347	140838075	ATAGTGTG others(11): Show ATAGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02559.hp1 HG02602.hp2 HG02451.hp1 HG02559.hp1 HG02602.hp2	a0002 a0003 a0002 a0003	a0002c0002 a0003c0003 a0002c0002 a0003c0003	a0002c0002t0001 a0003c0003t0001 a0003c0003t0009 a0002c0002t0001 a0003c0003t0001 a0003c0003t0009	a0002c0002t0001g0044 a0003c0003t0001g0010 a0003c0003t0009g0013 a0002c0002t0001g0044 a0003c0003t0001g0010 a0003c0003t0009g0013	3	212	0.0142	-18	c.238 others(39): Show c.2385+28504_2385+28521delTAGTGTGTGTGTGTGTGT	PCDHA4	ENSG00000204967.13	transcript	ENST00000530339.2	protein_coding	1/3			chr5	TogoVar
PCDHA4_chr5_140802068_141017347	140838077	AGTGTGTG others(11): Show AGTGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	NA18975.hp1 NA18975.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0186 a0001c0001t0002g0186	1	212	0.0047	-18	c.238 others(39): Show c.2385+28542_2385+28559delGTGTGTGTGTGTGTGTGT	PCDHA4	ENSG00000204967.13	transcript	ENST00000530339.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA5_chr5_140816613_141017347	140838075	ATAGTGTG others(11): Show ATAGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02559.hp2 HG02602.hp1 HG02451.hp1 HG02559.hp2 HG02602.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0010 a0001c0001t0011 a0001c0001t0001 a0001c0001t0010 a0001c0001t0011	a0001c0001t0001g0136 a0001c0001t0010g0053 a0001c0001t0011g0094 a0001c0001t0001g0136 a0001c0001t0010g0053 a0001c0001t0011g0094	3	220	0.0136	-18	c.235 others(39): Show c.2352+13949_2352+13966delTAGTGTGTGTGTGTGTGT	PCDHA5	ENSG00000204965.9	transcript	ENST00000529859.2	protein_coding	1/3			chr5	TogoVar
PCDHA5_chr5_140816613_141017347	140838077	AGTGTGTG others(11): Show AGTGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	NA18975.hp1 NA18975.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0107 a0002c0002t0002g0107	1	220	0.0046	-18	c.235 others(39): Show c.2352+13987_2352+14004delGTGTGTGTGTGTGTGTGT	PCDHA5	ENSG00000204965.9	transcript	ENST00000529859.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA6_chr5_140822960_141017347	140838075	ATAGTGTG others(11): Show ATAGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG02451.hp1 HG02559.hp2 HG02602.hp1 HG02451.hp1 HG02559.hp2 HG02602.hp1	a0001 a0003 a0001 a0003	a0001c0001 a0003c0003 a0001c0001 a0003c0003	a0001c0001t0001 a0003c0003t0001 a0003c0003t0007 a0001c0001t0001 a0003c0003t0001 a0003c0003t0007	a0001c0001t0001g0040 a0003c0003t0001g0018 a0003c0003t0007g0019 a0001c0001t0001g0040 a0003c0003t0001g0018 a0003c0003t0007g0019	3	236	0.0127	-18	c.239 others(37): Show c.2394+7591_2394+7608delTAGTGTGTGTGTGTGTGT	PCDHA6	ENSG00000081842.18	transcript	ENST00000529310.6	protein_coding	1/3			chr5	TogoVar
PCDHA6_chr5_140822960_141017347	140838077	AGTGTGTG others(11): Show AGTGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	NA18975.hp1 NA18975.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0219 a0001c0002t0001g0219	1	236	0.0042	-18	c.239 others(37): Show c.2394+7629_2394+7646delGTGTGTGTGTGTGTGTGT	PCDHA6	ENSG00000081842.18	transcript	ENST00000529310.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA7_chr5_140829269_141017347	140838075	ATAGTGTG others(11): Show ATAGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02559.hp2 HG02602.hp1 HG02451.hp2 HG02559.hp2 HG02602.hp1	a0002 a0008 a0002 a0008	a0002c0001 a0008c0013 a0002c0001 a0008c0013	a0002c0001t0001 a0008c0013t0001 a0008c0013t0007 a0002c0001t0001 a0008c0013t0001 a0008c0013t0007	a0002c0001t0001g0121 a0008c0013t0001g0122 a0008c0013t0007g0123 a0002c0001t0001g0121 a0008c0013t0001g0122 a0008c0013t0007g0123	3	248	0.0121	-18	c.235 others(37): Show c.2355+1338_2355+1355delTAGTGTGTGTGTGTGTGT	PCDHA7	ENSG00000204963.6	transcript	ENST00000525929.2	protein_coding	1/3			chr5	TogoVar
PCDHA7_chr5_140829269_141017347	140838077	AGTGTGTG others(11): Show AGTGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	NA18975.hp1 NA18975.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0243 a0001c0002t0001g0243	1	248	0.0040	-18	c.235 others(37): Show c.2355+1376_2355+1393delGTGTGTGTGTGTGTGTGT	PCDHA7	ENSG00000204963.6	transcript	ENST00000525929.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA8_chr5_140836187_141017347	140838075	ATAGTGTG others(11): Show ATAGTGTGTGTGTGTGTGT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02451.hp2 HG02559.hp1 HG02602.hp1 HG02451.hp2 HG02559.hp1 HG02602.hp1	a0002 a0003 a0002 a0003	a0002c0002 a0003c0003 a0003c0019 a0002c0002 a0003c0003 a0003c0019	a0002c0002t0001 a0003c0003t0006 a0003c0019t0001 a0002c0002t0001 a0003c0003t0006 a0003c0019t0001	a0002c0002t0001g0201 a0003c0003t0006g0028 a0003c0019t0001g0017 a0002c0002t0001g0201 a0003c0003t0006g0028 a0003c0019t0001g0017	3	258	0.0116	-18	c.-32 others(29): Show c.-3246_-3229delTAGTGTGTGTGTGTGTGT	PCDHA8	ENSG00000204962.6	transcript	ENST00000531613.2	protein_coding		3111		chr5	TogoVar
PCDHA8_chr5_140836187_141017347	140838077	AGTGTGTG others(11): Show AGTGTGTGTGTGTGTGTGT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	NA18975.hp2 NA18975.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0228 a0001c0001t0001g0228	1	258	0.0039	-18	c.-32 others(29): Show c.-3244_-3227delGTGTGTGTGTGTGTGTGT	PCDHA8	ENSG00000204962.6	transcript	ENST00000531613.2	protein_coding		3109		chr5	TogoVar
PCDHB13_chr5_141208919_141223979	141223402	TGGAGGAT others(11): Show TGGAGGATACACTCTCCAG	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01192.hp1 HG01192.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0000 a0001c0001t0009g0000	1	428	0.0023	-18	c.68 others(29): Show c.6883_*6900delGGAGGATACACTCTCCAG	PCDHB13	ENSG00000187372.11	transcript	ENST00000341948.6	protein_coding		4424		chr5	TogoVar
PCDHB16_chr5_141177387_141191226	141181621	CACACACA others(11): Show CACACACACACACACACAT	C C	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01891.hp1 HG02257.hp2 HG02559.hp2 others(7): Show HG01891.hp1 HG02257.hp2 HG02559.hp2 HG02622.hp2 HG02896.hp2 HG02897.hp1 HG02970.hp2 HG03041.hp1 NA18522.hp2 NA20300.hp1	a0003 a0003	a0003c0005 a0003c0005	a0003c0005t0001 a0003c0005t0016 a0003c0005t0001 a0003c0005t0016	a0003c0005t0001g0000 a0003c0005t0016g0000 a0003c0005t0001g0000 a0003c0005t0016g0000	10	452	0.0221	-18	c.-93 others(27): Show c.-938_-921delACACACACACACACACAT	PCDHB16	ENSG00000272674.4	transcript	ENST00000609684.3	protein_coding		765		chr5	TogoVar
PCDHB8_chr5_141172790_141185539	141181621	CACACACA others(11): Show CACACACACACACACACAT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG01891.hp1 HG02257.hp1 HG02559.hp2 others(6): Show HG01891.hp1 HG02257.hp1 HG02559.hp2 HG02622.hp2 HG02896.hp2 HG02970.hp2 HG03041.hp1 NA18522.hp2 NA20300.hp1	a0006 a0006	a0006c0006 a0006c0006	a0006c0006t0001 a0006c0006t0001	a0006c0006t0001g0000 a0006c0006t0001g0000	9	414	0.0217	-18	c.11 others(29): Show c.1182_*1199delACACACACACACACACAT	PCDHB8	ENSG00000120322.5	transcript	ENST00000239444.4	protein_coding		1083		chr5	TogoVar
PCDHGA10_chr5_141407987_141517975	141438619	TATATATA others(11): Show TATATATATATATATATAC	T T	intron_variant intron_variant	MODIFIER	NA18940.hp2 NA18944.hp1 NA18989.hp2 others(1): Show NA18940.hp2 NA18944.hp1 NA18989.hp2 NA19085.hp2	a0002 a0014 a0002 a0014	a0002c0002 a0014c0010 a0002c0002 a0014c0010	a0002c0002t0001 a0014c0010t0001 a0002c0002t0001 a0014c0010t0001	a0002c0002t0001g0224 a0002c0002t0001g0253 a0002c0002t0001g0256 others(1): Show a0002c0002t0001g0224 a0002c0002t0001g0253 a0002c0002t0001g0256 a0014c0010t0001g0292	4	306	0.0131	-18	c.243 others(39): Show c.2436+23010_2436+23027delTATATATATATATATACA	PCDHGA10	ENSG00000253846.3	transcript	ENST00000398610.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA10_chr5_141407987_141517975	141438623	TATATATA others(11): Show TATATATATATATACACAC	T T	intron_variant intron_variant	MODIFIER	HG01934.hp2 HG02109.hp1 HG02165.hp1 others(3): Show HG01934.hp2 HG02109.hp1 HG02165.hp1 HG02486.hp2 HG02970.hp2 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0004 a0001c0001 a0001c0004	a0001c0001t0001 a0001c0001t0002 a0001c0004t0005 a0001c0001t0001 a0001c0001t0002 a0001c0004t0005	a0001c0001t0001g0180 a0001c0001t0001g0203 a0001c0001t0002g0006 others(3): Show a0001c0001t0001g0180 a0001c0001t0001g0203 a0001c0001t0002g0006 a0001c0001t0002g0146 a0001c0004t0005g0195 a0001c0004t0005g0242	6	306	0.0196	-18	c.243 others(39): Show c.2436+23014_2436+23031delTATATATATATACACACA	PCDHGA10	ENSG00000253846.3	transcript	ENST00000398610.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA11_chr5_141416051_141517975	141438619	TATATATA others(11): Show TATATATATATATATATAC	T T	intron_variant intron_variant	MODIFIER	NA18940.hp1 NA18944.hp2 NA18989.hp2 others(1): Show NA18940.hp1 NA18944.hp2 NA18989.hp2 NA19085.hp1	a0001 a0012 a0001 a0012	a0001c0001 a0012c0017 a0001c0001 a0012c0017	a0001c0001t0001 a0012c0017t0001 a0001c0001t0001 a0012c0017t0001	a0001c0001t0001g0167 a0001c0001t0001g0174 a0001c0001t0001g0207 others(1): Show a0001c0001t0001g0167 a0001c0001t0001g0174 a0001c0001t0001g0207 a0012c0017t0001g0185	4	310	0.0129	-18	c.243 others(39): Show c.2433+14961_2433+14978delTATATATATATATATACA	PCDHGA11	ENSG00000253873.6	transcript	ENST00000398587.7	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA11_chr5_141416051_141517975	141438623	TATATATA others(11): Show TATATATATATATACACAC	T T	intron_variant intron_variant	MODIFIER	HG01934.hp2 HG02109.hp2 HG02165.hp1 others(3): Show HG01934.hp2 HG02109.hp2 HG02165.hp1 HG02486.hp1 HG02970.hp2 HG03516.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0003 a0001c0001t0008 others(1): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0008 a0001c0001t0011	a0001c0001t0001g0091 a0001c0001t0001g0113 a0001c0001t0003g0265 others(3): Show a0001c0001t0001g0091 a0001c0001t0001g0113 a0001c0001t0003g0265 a0001c0001t0008g0078 a0001c0001t0011g0107 a0001c0001t0011g0108	6	310	0.0194	-18	c.243 others(39): Show c.2433+14965_2433+14982delTATATATATATACACACA	PCDHGA11	ENSG00000253873.6	transcript	ENST00000398587.7	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA12_chr5_141425507_141517975	141438619	TATATATA others(11): Show TATATATATATATATATAC	T T	intron_variant intron_variant	MODIFIER	NA18940.hp1 NA18944.hp2 NA18989.hp1 others(1): Show NA18940.hp1 NA18944.hp2 NA18989.hp1 NA19085.hp1	a0001 a0014 a0001 a0014	a0001c0001 a0014c0018 a0001c0001 a0014c0018	a0001c0001t0001 a0014c0018t0001 a0001c0001t0001 a0014c0018t0001	a0001c0001t0001g0090 a0001c0001t0001g0204 a0001c0001t0001g0205 others(1): Show a0001c0001t0001g0090 a0001c0001t0001g0204 a0001c0001t0001g0205 a0014c0018t0001g0091	4	318	0.0126	-18	c.242 others(37): Show c.2424+5438_2424+5455delTATATATATATATATACA	PCDHGA12	ENSG00000253159.3	transcript	ENST00000252085.4	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA12_chr5_141425507_141517975	141438623	TATATATA others(11): Show TATATATATATATACACAC	T T	intron_variant intron_variant	MODIFIER	HG01934.hp2 HG02109.hp2 HG02165.hp1 others(3): Show HG01934.hp2 HG02109.hp2 HG02165.hp1 HG02486.hp2 HG02970.hp2 HG03516.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0006c0009 a0001c0001 a0006c0009	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0006c0009t0002	a0001c0001t0001g0004 a0001c0001t0001g0288 a0001c0001t0002g0237 others(3): Show a0001c0001t0001g0004 a0001c0001t0001g0288 a0001c0001t0002g0237 a0001c0001t0005g0018 a0001c0001t0005g0184 a0006c0009t0002g0042	6	318	0.0189	-18	c.242 others(37): Show c.2424+5442_2424+5459delTATATATATATACACACA	PCDHGA12	ENSG00000253159.3	transcript	ENST00000252085.4	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar

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