Joint Open Genome and Omics Platform (JoGo)

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Snpeff annotation impact detail

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	hgvs_p	genename	geneid	featuretype	featureid	transcript_biotype	rank	cdna cdna pos length	cds cds pos length	aa aa pos length	distance	status	chr	external
RPTOR_chr17_80539838_80971368	80744641	TAGCACTC others(11): Show TAGCACTCTCCTGGTTACG	T T	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0029 a0001c0029	a0001c0029t0085 a0001c0029t0085	a0001c0029t0085g0012 a0001c0029t0085g0012	1	193	0.0052	-18	c.655 others(35): Show c.655-9363_655-9346delTCTCCTGGTTACGAGCAC		RPTOR	ENSG00000141564.16	transcript	ENST00000306801.8	protein_coding	5/33					INFO_REALIGN_3_PRIME	chr17	TogoVar
RPTOR_chr17_80539838_80971368	80744793	CCCTGGCT others(11): Show CCCTGGCTACTAGCACTGT	C C	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02109.hp2	a0001 a0001	a0001c0009 a0001c0009	a0001c0009t0012 a0001c0009t0012	a0001c0009t0012g0106 a0001c0009t0012g0106	1	184	0.0054	-18	c.655 others(35): Show c.655-9201_655-9184delTGTCCTGGCTACTAGCAC		RPTOR	ENSG00000141564.16	transcript	ENST00000306801.8	protein_coding	5/33					INFO_REALIGN_3_PRIME	chr17	TogoVar
RPTOR_chr17_80539838_80971368	80744817	CTACTAGC others(11): Show CTACTAGCACAGCCCTGGT	C C	intron_variant intron_variant	MODIFIER	HG02165.hp2 HG02165.hp2	a0001 a0001	a0001c0023 a0001c0023	a0001c0023t0009 a0001c0023t0009	a0001c0023t0009g0070 a0001c0023t0009g0070	1	158	0.0063	-18	c.655 others(35): Show c.655-9183_655-9166delAGCCCTGGTTACTAGCAC		RPTOR	ENSG00000141564.16	transcript	ENST00000306801.8	protein_coding	5/33					INFO_REALIGN_3_PRIME	chr17	TogoVar
RPTOR_chr17_80539838_80971368	80744829	CCCTGGTT others(11): Show CCCTGGTTACTAGCACTGT	C C	intron_variant intron_variant	MODIFIER	HG00741.hp1 HG02055.hp2 HG02717.hp2 HG00741.hp1 HG02055.hp2 HG02717.hp2	a0001 a0001	a0001c0025 a0001c0040 a0001c0087 a0001c0025 a0001c0040 a0001c0087	a0001c0025t0052 a0001c0040t0066 a0001c0087t0002 a0001c0025t0052 a0001c0040t0066 a0001c0087t0002	a0001c0025t0052g0181 a0001c0040t0066g0180 a0001c0087t0002g0050 a0001c0025t0052g0181 a0001c0040t0066g0180 a0001c0087t0002g0050	3	183	0.0164	-18	c.655 others(35): Show c.655-9175_655-9158delTTACTAGCACTGTCCTGG		RPTOR	ENSG00000141564.16	transcript	ENST00000306801.8	protein_coding	5/33					INFO_REALIGN_3_PRIME	chr17	TogoVar
RPTOR_chr17_80539838_80971368	80744835	TTACTAGC others(11): Show TTACTAGCACTGTCCTGGC	T T	intron_variant intron_variant	MODIFIER	NA18963.hp1 NA18963.hp1	a0001 a0001	a0001c0024 a0001c0024	a0001c0024t0037 a0001c0024t0037	a0001c0024t0037g0095 a0001c0024t0037g0095	1	137	0.0073	-18	c.655 others(35): Show c.655-9157_655-9140delCTACTAGCACTGTCCTGG		RPTOR	ENSG00000141564.16	transcript	ENST00000306801.8	protein_coding	5/33					INFO_REALIGN_3_PRIME	chr17	TogoVar
RPTOR_chr17_80539838_80971368	80744916	CAGCCCTG others(11): Show CAGCCCTGGTTACTAGCAG	C C	intron_variant intron_variant	MODIFIER	HG00140.hp2 HG01074.hp1 HG01167.hp1 others(7): Show HG00140.hp2 HG01074.hp1 HG01167.hp1 HG01168.hp2 HG01361.hp2 HG01517.hp1 HG01934.hp2 HG02258.hp1 HG02683.hp1 HG03654.hp2	a0001 a0001	a0001c0004 a0001c0010 a0001c0011 others(4): Show a0001c0004 a0001c0010 a0001c0011 a0001c0015 a0001c0021 a0001c0027 a0001c0033	a0001c0004t0014 a0001c0004t0023 a0001c0010t0056 others(7): Show a0001c0004t0014 a0001c0004t0023 a0001c0010t0056 a0001c0010t0071 a0001c0011t0047 a0001c0015t0046 a0001c0021t0079 a0001c0027t0016 a0001c0027t0097 a0001c0033t0023	a0001c0004t0014g0101 a0001c0004t0023g0077 a0001c0010t0056g0187 others(7): Show a0001c0004t0014g0101 a0001c0004t0023g0077 a0001c0010t0056g0187 a0001c0010t0071g0188 a0001c0011t0047g0079 a0001c0015t0046g0082 a0001c0021t0079g0006 a0001c0027t0016g0189 a0001c0027t0097g0059 a0001c0033t0023g0078	10	192	0.0521	-18	c.655 others(35): Show c.655-9067_655-9050delTTACTAGCAGAGCCCTGG		RPTOR	ENSG00000141564.16	transcript	ENST00000306801.8	protein_coding	5/33					INFO_REALIGN_3_PRIME	chr17	TogoVar
RPTOR_chr17_80539838_80971368	80744945	ACTAGCAG others(11): Show ACTAGCAGAGCCCTGGCTT	A A	intron_variant intron_variant	MODIFIER	HG02258.hp2 HG02717.hp2 HG02258.hp2 HG02717.hp2	a0001 a0001	a0001c0056 a0001c0087 a0001c0056 a0001c0087	a0001c0056t0001 a0001c0087t0002 a0001c0056t0001 a0001c0087t0002	a0001c0056t0001g0075 a0001c0087t0002g0050 a0001c0056t0001g0075 a0001c0087t0002g0050	2	194	0.0103	-18	c.655 others(35): Show c.655-9049_655-9032delCTTCTAGCAGAGCCCTGG		RPTOR	ENSG00000141564.16	transcript	ENST00000306801.8	protein_coding	5/33					INFO_REALIGN_3_PRIME	chr17	TogoVar
RPUSD4_chr11_126197096_126216650	126210533	ACACACAC others(11): Show ACACACACACACACACACC	A A	intron_variant intron_variant	MODIFIER	NA20805.hp2 NA20805.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0094 a0001c0002t0001g0094	1	414	0.0024	-18	c.355 others(33): Show c.355+339_355+356delGGTGTGTGTGTGTGTGTG		RPUSD4	ENSG00000165526.9	transcript	ENST00000298317.9	protein_coding	2/6						chr11	TogoVar
RREB1_chr6_7102961_7256980	7249062	TGAGAGAG others(11): Show TGAGAGAGAGAGAGAGAGA	T T	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01169.hp1 HG02615.hp2 HG01169.hp1 HG02615.hp2	a0004 a0004	a0004c0006 a0004c0006	a0004c0006t0024 a0004c0006t0024	a0004c0006t0024g0289 a0004c0006t0024g0290 a0004c0006t0024g0289 a0004c0006t0024g0290	2	31	0.0645	-18	c.11 others(27): Show c.119_*136delGAGAGAGAGAGAGAGAGA		RREB1	ENSG00000124782.21	transcript	ENST00000379938.7	protein_coding	13/13				119	INFO_REALIGN_3_PRIME	chr6	TogoVar
RREB1_chr6_7102961_7256980	7252815	CCAACTCC others(11): Show CCAACTCCTAGCAGAGCCT	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00639.hp2 HG01243.hp2 HG00639.hp2 HG01243.hp2	a0002 a0002	a0002c0004 a0002c0004	a0002c0004t0022 a0002c0004t0022	a0002c0004t0022g0027 a0002c0004t0022g0140 a0002c0004t0022g0027 a0002c0004t0022g0140	2	290	0.0069	-18	c.38 others(29): Show c.3848_*3865delCAACTCCTAGCAGAGCCT		RREB1	ENSG00000124782.21	transcript	ENST00000379938.7	protein_coding					836		chr6	TogoVar
RRP15_chr1_218280293_218342983	218331651	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG02896.hp1 HG02896.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0081 a0003c0003t0081	a0003c0003t0081g0306 a0003c0003t0081g0306	1	85	0.0118	-18	c.58 others(27): Show c.582_*599delTTTTTTTTTTTTTTTTTT		RRP15	ENSG00000067533.6	transcript	ENST00000366932.4	protein_coding	5/5				582	INFO_REALIGN_3_PRIME	chr1	TogoVar
RRP1_chr21_43784577_43810293	43787113	TGACATAC others(11): Show TGACATACCCACTGTGCGC	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	HG03491.hp2 HG03492.hp1 HG03491.hp2 HG03492.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0002 a0001c0003t0002	a0001c0003t0002g0002 a0001c0003t0002g0002	2	392	0.0051	-18	c.-25 others(29): Show c.-2516_-2499delGACATACCCACTGTGCGC		RRP1	ENSG00000160214.13	transcript	ENST00000497547.2	protein_coding					2463		chr21	TogoVar
RRP36_chr6_43016623_43034599	43021695	CCGGGGCC others(11): Show CCGGGGCCCGACGTCCCCG	C C	disruptive_inframe_deletion disruptive_inframe_deletion	MODERATE	HG01257.hp1 HG01346.hp1 HG01943.hp1 others(8): Show HG01257.hp1 HG01346.hp1 HG01943.hp1 HG01975.hp1 HG01978.hp1 HG01978.hp2 HG01993.hp2 HG02148.hp1 NA18952.hp1 NA19060.hp2 NA20300.hp1	a0003 a0003	a0003c0005 a0003c0005	a0003c0005t0001 a0003c0005t0001	a0003c0005t0001g0001 a0003c0005t0001g0002 a0003c0005t0001g0005 others(2): Show a0003c0005t0001g0001 a0003c0005t0001g0002 a0003c0005t0001g0005 a0003c0005t0001g0010 a0003c0005t0001g0059	11	332	0.0331	-18	c.51_ others(23): Show c.51_68delACGTCCCCGCGGGGCCCG	p.Arg others(11): Show p.Arg18_Arg23del	RRP36	ENSG00000124541.7	transcript	ENST00000244496.6	protein_coding	1/7	83/1183	51/780	17/259		INFO_REALIGN_3_PRIME	chr6	TogoVar
RS1_chrX_18634688_18677108	18636336	TTTATTAT others(11): Show TTTATTATTATTATTATTA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02965.hp1 HG03098.hp1 HG03130.hp1 others(1): Show HG02965.hp1 HG03098.hp1 HG03130.hp1 NA18906.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0002 a0001c0002t0003 a0001c0002t0001 a0001c0002t0002 a0001c0002t0003	a0001c0002t0001g0136 a0001c0002t0001g0141 a0001c0002t0002g0011 others(1): Show a0001c0002t0001g0136 a0001c0002t0001g0141 a0001c0002t0002g0011 a0001c0002t0003g0234	4	58	0.0690	-18	c.56 others(29): Show c.5650_*5667delTAATAATAATAATAATAA		RS1	ENSG00000102104.9	transcript	ENST00000379984.4	protein_coding					3351		chrX	TogoVar
RSBN1_chr1_113756832_113817476	113799565	TACACACA others(11): Show TACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	NA18942.hp2 NA18942.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0003 a0001c0002t0003	a0001c0002t0003g0243 a0001c0002t0003g0243	1	62	0.0161	-18	c.704 others(35): Show c.704-1547_704-1530delGTGTGTGTGTGTGTGTGT		RSBN1	ENSG00000081019.14	transcript	ENST00000261441.9	protein_coding	1/6						chr1	TogoVar
RSPH3_chr6_158967871_159005202	158984434	TTATATAT others(11): Show TTATATATATATATATATA	T T	intron_variant intron_variant	MODIFIER	HG01261.hp2 HG01433.hp1 HG02602.hp1 others(2): Show HG01261.hp2 HG01433.hp1 HG02602.hp1 HG02622.hp1 HG03540.hp2	a0006 a0006	a0006c0006 a0006c0006	a0006c0006t0008 a0006c0006t0011 a0006c0006t0008 a0006c0006t0011	a0006c0006t0008g0040 a0006c0006t0008g0041 a0006c0006t0008g0042 others(2): Show a0006c0006t0008g0040 a0006c0006t0008g0041 a0006c0006t0008g0042 a0006c0006t0011g0038 a0006c0006t0011g0039	5	49	0.1020	-18	c.347 others(33): Show c.347-645_347-628delTATATATATATATATATA		RSPH3	ENSG00000130363.13	transcript	ENST00000367069.7	protein_coding	3/7						chr6	TogoVar
RSPH6A_chr19_45790713_45820308	45800758	ACACACAC others(11): Show ACACACACACACACACACT	A A	intron_variant intron_variant	MODIFIER	NA18979.hp2 NA18979.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0274 a0001c0001t0001g0274	1	422	0.0024	-18	c.179 others(35): Show c.1799-213_1799-196delAGTGTGTGTGTGTGTGTG		RSPH6A	ENSG00000104941.8	transcript	ENST00000221538.8	protein_coding	4/5						chr19	TogoVar
RSPH6A_chr19_45790713_45820308	45810145	ATTATTTT others(11): Show ATTATTTTTATTTATTTAT	A A	intron_variant intron_variant	MODIFIER	HG01081.hp1 HG01167.hp2 HG01192.hp2 others(15): Show HG01081.hp1 HG01167.hp2 HG01192.hp2 HG01256.hp2 HG01515.hp1 HG01517.hp2 HG02280.hp2 HG02486.hp1 HG02559.hp1 HG02698.hp1 HG02735.hp1 HG02818.hp1 HG02897.hp1 HG03130.hp2 HG03139.hp2 HG03831.hp2 NA19240.hp1 NA19240.hp2	a0001 a0008 a0001 a0008	a0001c0001 a0008c0021 a0001c0001 a0008c0021	a0001c0001t0001 a0008c0021t0001 a0001c0001t0001 a0008c0021t0001	a0001c0001t0001g0009 a0001c0001t0001g0033 a0001c0001t0001g0034 others(10): Show a0001c0001t0001g0009 a0001c0001t0001g0033 a0001c0001t0001g0034 a0001c0001t0001g0154 a0001c0001t0001g0155 a0001c0001t0001g0156 a0001c0001t0001g0157 a0001c0001t0001g0158 a0001c0001t0001g0159 a0001c0001t0001g0160 a0001c0001t0001g0161 a0001c0001t0001g0171 a0008c0021t0001g0295	18	422	0.0427	-18	c.888 others(33): Show c.888+440_888+457delATAAATAAATAAAAATAA		RSPH6A	ENSG00000104941.8	transcript	ENST00000221538.8	protein_coding	2/5						chr19	TogoVar
RSPO2_chr8_107894316_108088620	107935571	GCCACAAA others(11): Show GCCACAAAATCATGCTCTA	G G	intron_variant intron_variant	MODIFIER	NA18612.hp2 NA18612.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0134 a0002c0002t0001g0134	1	238	0.0042	-18	c.616 others(37): Show c.616+22491_616+22508delTAGAGCATGATTTTGTGG		RSPO2	ENSG00000147655.12	transcript	ENST00000276659.10	protein_coding	5/5						chr8	TogoVar
RSPO2_chr8_107894316_108088620	108003303	ATATATAT others(11): Show ATATATATATTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG01891.hp1 HG01891.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0079 a0001c0001t0002g0079	1	224	0.0045	-18	c.95- others(35): Show c.95-14077_95-14060delAAAAAAAAAATATATATA		RSPO2	ENSG00000147655.12	transcript	ENST00000276659.10	protein_coding	2/5						chr8	TogoVar
RSPO2_chr8_107894316_108088620	108003305	ATATATAT others(11): Show ATATATATTTTTTTTTTTT	A A	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG01071.hp2 HG01255.hp1 others(2): Show HG00733.hp2 HG01071.hp2 HG01255.hp1 HG01515.hp2 HG03239.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0002 a0002c0002t0001 a0002c0002t0016 a0001c0001t0002 a0002c0002t0001 a0002c0002t0016	a0001c0001t0002g0050 a0002c0002t0001g0048 a0002c0002t0001g0180 others(2): Show a0001c0001t0002g0050 a0002c0002t0001g0048 a0002c0002t0001g0180 a0002c0002t0001g0204 a0002c0002t0016g0049	5	232	0.0216	-18	c.95- others(35): Show c.95-14079_95-14062delAAAAAAAAAAAATATATA		RSPO2	ENSG00000147655.12	transcript	ENST00000276659.10	protein_coding	2/5						chr8	TogoVar
RSPO2_chr8_107894316_108088620	108029054	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02886.hp1 HG02886.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0095 a0001c0001t0002g0095	1	21	0.0476	-18	c.95- others(35): Show c.95-39828_95-39811delAAAAAAAAAAAAAAAAAA		RSPO2	ENSG00000147655.12	transcript	ENST00000276659.10	protein_coding	2/5						chr8	TogoVar
RSRC1_chr3_158105089_158550730	158118413	CTGTGTGT others(11): Show CTGTGTGTGTGTGTGTGTG	C C	intron_variant intron_variant	MODIFIER	HG00741.hp2 HG00741.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0112 a0001c0001t0008g0112	1	172	0.0058	-18	c.-2- others(33): Show c.-2-3657_-2-3640delTGTGTGTGTGTGTGTGTG		RSRC1	ENSG00000174891.14	transcript	ENST00000611884.5	protein_coding	1/9					INFO_REALIGN_3_PRIME	chr3	TogoVar
RSRC1_chr3_158105089_158550730	158126874	TTTTTTGT others(11): Show TTTTTTGTTTTTGTTTTTG	T T	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00280.hp2 HG00323.hp1 others(167): Show HG00280.hp1 HG00280.hp2 HG00323.hp1 HG00323.hp2 HG00408.hp1 HG00408.hp2 HG00423.hp2 HG00544.hp2 HG00558.hp2 HG00597.hp1 HG00597.hp2 HG00609.hp1 HG00609.hp2 HG00639.hp1 HG00642.hp1 HG00642.hp2 HG00735.hp1 HG00735.hp2 HG00738.hp1 HG00738.hp2 HG00741.hp1 HG01069.hp1 HG01070.hp1 HG01071.hp2 HG01099.hp2 HG01109.hp2 HG01123.hp2 HG01192.hp1 HG01243.hp2 HG01255.hp2 HG01258.hp1 HG01258.hp2 HG01261.hp2 HG01346.hp1 HG01358.hp1 HG01433.hp1 HG01433.hp2 HG01516.hp2 HG01517.hp2 HG01884.hp2 HG01978.hp1 HG01981.hp1 HG01981.hp2 HG01993.hp1 HG01993.hp2 HG02004.hp1 HG02004.hp2 HG02055.hp2 HG02056.hp1 HG02056.hp2 HG02074.hp1 HG02074.hp2 HG02109.hp1 HG02109.hp2 HG02129.hp1 HG02129.hp2 HG02132.hp2 HG02145.hp1 HG02145.hp2 HG02257.hp1 HG02257.hp2 HG02273.hp1 HG02273.hp2 HG02280.hp2 HG02523.hp1 HG02523.hp2 HG02559.hp2 HG02615.hp1 HG02615.hp2 HG02622.hp1 HG02683.hp1 HG02683.hp2 HG02698.hp2 HG02723.hp2 HG02735.hp2 HG02738.hp2 HG02809.hp1 HG02896.hp1 HG02896.hp2 HG02897.hp2 HG02922.hp1 HG02965.hp1 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03139.hp2 HG03209.hp1 HG03453.hp2 HG03471.hp1 HG03490.hp2 HG03491.hp1 HG03579.hp2 HG03654.hp1 HG03654.hp2 HG03688.hp1 HG03704.hp2 HG03831.hp1 HG03831.hp2 HG04184.hp1 HG04199.hp1 HG04204.hp2 HG06807.hp2 NA18522.hp1 NA18522.hp2 NA18747.hp1 NA18747.hp2 NA18906.hp1 NA18943.hp2 NA18944.hp1 NA18944.hp2 NA18945.hp2 NA18946.hp1 NA18948.hp1 NA18948.hp2 NA18950.hp1 NA18950.hp2 NA18952.hp2 NA18953.hp1 NA18953.hp2 NA18954.hp1 NA18956.hp1 NA18956.hp2 NA18961.hp2 NA18962.hp2 NA18968.hp2 NA18969.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp1 NA18971.hp2 NA18977.hp2 NA18982.hp2 NA18983.hp1 NA18983.hp2 NA18984.hp1 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18990.hp2 NA18994.hp2 NA18999.hp1 NA19000.hp2 NA19004.hp1 NA19004.hp2 NA19011.hp1 NA19054.hp1 NA19057.hp1 NA19058.hp1 NA19058.hp2 NA19062.hp1 NA19062.hp2 NA19064.hp1 NA19064.hp2 NA19070.hp1 NA19070.hp2 NA19072.hp2 NA19077.hp2 NA19079.hp1 NA19080.hp1 NA19086.hp2 NA19087.hp1 NA19088.hp1 NA19088.hp2 NA19090.hp2 NA19240.hp2 NA20300.hp2 NA20752.hp1 NA20752.hp2 NA20805.hp1 NA20905.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(19): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0010 a0001c0001t0011 a0001c0001t0012 a0001c0001t0015 a0001c0001t0016 a0001c0001t0021 a0001c0001t0022 a0001c0001t0023 a0001c0001t0024 a0001c0001t0025 a0001c0001t0026 a0001c0001t0028 a0001c0001t0031	a0001c0001t0001g0014 a0001c0001t0001g0050 a0001c0001t0001g0051 others(167): Show a0001c0001t0001g0014 a0001c0001t0001g0050 a0001c0001t0001g0051 a0001c0001t0001g0052 a0001c0001t0001g0053 a0001c0001t0001g0055 a0001c0001t0001g0057 a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0001g0061 a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0066 a0001c0001t0001g0067 a0001c0001t0001g0068 a0001c0001t0001g0069 a0001c0001t0001g0070 a0001c0001t0001g0073 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0077 a0001c0001t0001g0079 a0001c0001t0001g0083 a0001c0001t0001g0084 a0001c0001t0001g0089 a0001c0001t0001g0093 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0099 a0001c0001t0001g0100 a0001c0001t0001g0165 a0001c0001t0001g0166 a0001c0001t0001g0169 a0001c0001t0001g0170 a0001c0001t0001g0171 a0001c0001t0001g0173 a0001c0001t0001g0174 a0001c0001t0001g0176 a0001c0001t0001g0177 a0001c0001t0001g0178 a0001c0001t0001g0179 a0001c0001t0001g0180 a0001c0001t0001g0186 a0001c0001t0001g0187 a0001c0001t0001g0195 a0001c0001t0001g0202 a0001c0001t0001g0212 a0001c0001t0001g0213 a0001c0001t0001g0215 a0001c0001t0001g0216 a0001c0001t0001g0217 a0001c0001t0001g0218 a0001c0001t0001g0221 a0001c0001t0001g0222 a0001c0001t0001g0224 a0001c0001t0001g0226 a0001c0001t0001g0227 a0001c0001t0001g0228 a0001c0001t0001g0244 a0001c0001t0001g0254 a0001c0001t0002g0021 a0001c0001t0002g0022 a0001c0001t0002g0023 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0026 a0001c0001t0002g0054 a0001c0001t0002g0071 a0001c0001t0002g0095 a0001c0001t0002g0101 a0001c0001t0002g0102 a0001c0001t0002g0103 a0001c0001t0002g0105 a0001c0001t0002g0108 a0001c0001t0002g0109 a0001c0001t0002g0229 a0001c0001t0002g0230 a0001c0001t0002g0231 a0001c0001t0002g0233 a0001c0001t0002g0234 a0001c0001t0002g0235 a0001c0001t0002g0236 a0001c0001t0002g0237 a0001c0001t0002g0238 a0001c0001t0002g0239 a0001c0001t0002g0240 a0001c0001t0002g0241 a0001c0001t0002g0242 a0001c0001t0002g0243 a0001c0001t0002g0246 a0001c0001t0002g0247 a0001c0001t0002g0248 a0001c0001t0002g0255 a0001c0001t0002g0270 a0001c0001t0002g0271 a0001c0001t0002g0272 a0001c0001t0002g0273 a0001c0001t0003g0058 a0001c0001t0003g0091 a0001c0001t0004g0038 a0001c0001t0004g0078 a0001c0001t0004g0156 a0001c0001t0004g0191 a0001c0001t0004g0192 a0001c0001t0004g0193 a0001c0001t0004g0194 a0001c0001t0004g0196 a0001c0001t0004g0199 a0001c0001t0004g0201 a0001c0001t0004g0210 a0001c0001t0004g0220 a0001c0001t0004g0256 a0001c0001t0004g0269 a0001c0001t0005g0056 a0001c0001t0005g0065 a0001c0001t0006g0027 a0001c0001t0006g0028 a0001c0001t0006g0029 a0001c0001t0006g0030 a0001c0001t0006g0080 a0001c0001t0006g0200 a0001c0001t0006g0219 a0001c0001t0006g0232 a0001c0001t0006g0245 a0001c0001t0007g0167 a0001c0001t0007g0189 a0001c0001t0007g0203 a0001c0001t0007g0205 a0001c0001t0007g0206 a0001c0001t0007g0208 a0001c0001t0007g0276 a0001c0001t0008g0072 a0001c0001t0008g0090 a0001c0001t0008g0094 a0001c0001t0009g0039 a0001c0001t0009g0040 a0001c0001t0010g0168 a0001c0001t0010g0172 a0001c0001t0010g0181 a0001c0001t0010g0182 a0001c0001t0010g0183 a0001c0001t0010g0184 a0001c0001t0010g0188 a0001c0001t0010g0214 a0001c0001t0011g0082 a0001c0001t0011g0190 a0001c0001t0011g0197 a0001c0001t0011g0198 a0001c0001t0011g0204 a0001c0001t0011g0207 a0001c0001t0011g0209 a0001c0001t0011g0211 a0001c0001t0012g0031 a0001c0001t0015g0085 a0001c0001t0015g0086 a0001c0001t0015g0087 a0001c0001t0015g0088 a0001c0001t0016g0064 a0001c0001t0016g0098 a0001c0001t0016g0225 a0001c0001t0021g0020 a0001c0001t0022g0041 a0001c0001t0023g0104 a0001c0001t0023g0106 a0001c0001t0024g0223 a0001c0001t0025g0175 a0001c0001t0026g0107 a0001c0001t0028g0185 a0001c0001t0031g0081	170	235	0.7234	-18	c.320 others(35): Show c.320+2913_320+2930delGTTTTTGTTTTTGTTTTT		RSRC1	ENSG00000174891.14	transcript	ENST00000611884.5	protein_coding	3/9					INFO_REALIGN_3_PRIME	chr3	TogoVar
RSRC1_chr3_158105089_158550730	158194054	TACACACA others(11): Show TACACACACACACACACAC	T T	intron_variant intron_variant	MODIFIER	HG01891.hp2 HG02074.hp1 HG02257.hp1 others(17): Show HG01891.hp2 HG02074.hp1 HG02257.hp1 HG02258.hp1 HG02280.hp1 HG02523.hp1 HG02572.hp1 HG02809.hp2 HG02886.hp1 HG02896.hp2 HG02922.hp1 HG04184.hp1 NA18747.hp1 NA18952.hp2 NA18970.hp2 NA18989.hp2 NA19004.hp2 NA19054.hp1 NA19058.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0007 a0001c0001t0008 a0001c0001t0009 a0001c0001t0015 a0001c0001t0016 a0001c0001t0022	a0001c0001t0001g0014 a0001c0001t0001g0059 a0001c0001t0001g0076 others(17): Show a0001c0001t0001g0014 a0001c0001t0001g0059 a0001c0001t0001g0076 a0001c0001t0001g0084 a0001c0001t0001g0216 a0001c0001t0002g0007 a0001c0001t0002g0054 a0001c0001t0007g0189 a0001c0001t0008g0072 a0001c0001t0009g0006 a0001c0001t0009g0009 a0001c0001t0009g0010 a0001c0001t0009g0012 a0001c0001t0009g0034 a0001c0001t0015g0085 a0001c0001t0015g0086 a0001c0001t0015g0087 a0001c0001t0015g0088 a0001c0001t0016g0064 a0001c0001t0022g0008	20	26	0.7692	-18	c.321 others(35): Show c.321-8986_321-8969delCACACACACACACACACA		RSRC1	ENSG00000174891.14	transcript	ENST00000611884.5	protein_coding	3/9					INFO_REALIGN_3_PRIME	chr3	TogoVar
RSRC1_chr3_158105089_158550730	158375159	GTTATTAT others(11): Show GTTATTATTATTATTATTA	G G	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG01175.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0250 a0001c0001t0004g0250	1	53	0.0189	-18	c.583 others(37): Show c.583+20276_583+20293delTTATTATTATTATTATTA		RSRC1	ENSG00000174891.14	transcript	ENST00000611884.5	protein_coding	6/9					INFO_REALIGN_3_PRIME	chr3	TogoVar
RSRC1_chr3_158105089_158550730	158399123	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02738.hp2 NA18990.hp2 NA19000.hp2 HG02738.hp2 NA18990.hp2 NA19000.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0028 a0001c0001t0001 a0001c0001t0028	a0001c0001t0001g0055 a0001c0001t0001g0060 a0001c0001t0028g0185 a0001c0001t0001g0055 a0001c0001t0001g0060 a0001c0001t0028g0185	3	173	0.0173	-18	c.583 others(37): Show c.583+44247_583+44264delTTTTTTTTTTTTTTTTTT		RSRC1	ENSG00000174891.14	transcript	ENST00000611884.5	protein_coding	6/9					INFO_REALIGN_3_PRIME	chr3	TogoVar
RSRC1_chr3_158105089_158550730	158455979	CAAAAAAA others(11): Show CAAAAAAAAAAAAAAAAAA	C C	intron_variant intron_variant	MODIFIER	HG01175.hp2 HG01243.hp2 HG01255.hp2 others(29): Show HG01175.hp2 HG01243.hp2 HG01255.hp2 HG01891.hp2 HG02109.hp1 HG02145.hp1 HG02257.hp2 HG02258.hp1 HG02280.hp1 HG02280.hp2 HG02572.hp1 HG02615.hp1 HG02647.hp2 HG02723.hp1 HG02723.hp2 HG02809.hp2 HG02886.hp1 HG02965.hp1 HG03098.hp1 HG03098.hp2 HG03130.hp2 HG03139.hp1 HG03209.hp1 HG03471.hp1 HG03486.hp1 HG03516.hp2 HG03579.hp1 HG03579.hp2 HG06807.hp2 NA18906.hp1 NA19240.hp1 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 others(7): Show a0001c0001t0002 a0001c0001t0004 a0001c0001t0006 a0001c0001t0007 a0001c0001t0009 a0001c0001t0012 a0001c0001t0013 a0001c0001t0014 a0001c0001t0021 a0001c0001t0022	a0001c0001t0002g0007 a0001c0001t0002g0021 a0001c0001t0002g0022 others(29): Show a0001c0001t0002g0007 a0001c0001t0002g0021 a0001c0001t0002g0022 a0001c0001t0002g0023 a0001c0001t0002g0024 a0001c0001t0002g0025 a0001c0001t0002g0026 a0001c0001t0002g0095 a0001c0001t0002g0262 a0001c0001t0002g0268 a0001c0001t0004g0250 a0001c0001t0006g0027 a0001c0001t0006g0028 a0001c0001t0006g0029 a0001c0001t0006g0030 a0001c0001t0006g0036 a0001c0001t0007g0276 a0001c0001t0009g0006 a0001c0001t0009g0009 a0001c0001t0009g0010 a0001c0001t0009g0011 a0001c0001t0009g0012 a0001c0001t0009g0034 a0001c0001t0009g0039 a0001c0001t0009g0040 a0001c0001t0012g0031 a0001c0001t0013g0019 a0001c0001t0013g0275 a0001c0001t0014g0274 a0001c0001t0021g0035 a0001c0001t0022g0008 a0001c0001t0022g0041	32	66	0.4848	-18	c.584 others(35): Show c.584-4938_584-4921delAAAAAAAAAAAAAAAAAA		RSRC1	ENSG00000174891.14	transcript	ENST00000611884.5	protein_coding	6/9					INFO_REALIGN_3_PRIME	chr3	TogoVar
RTCA_chr1_100261216_100297769	100283932	AAAGAAAA others(11): Show AAAGAAAAAAAAAAAAAAG	A A	intron_variant intron_variant	MODIFIER	NA18969.hp2 NA18994.hp1 NA18969.hp2 NA18994.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0040 a0001c0001t0004g0144 a0001c0001t0004g0040 a0001c0001t0004g0144	2	294	0.0068	-18	c.800 others(35): Show c.800-1293_800-1276delGAAAAAAAAAAAAAAGAA		RTCA	ENSG00000137996.13	transcript	ENST00000370128.9	protein_coding	8/10					INFO_REALIGN_3_PRIME	chr1	TogoVar
RTEL1_chr20_63653312_63701245	63691390	GGGAGCCA others(11): Show GGGAGCCATTCCCCTCTTC	G G	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0032 a0001c0001t0003g0032	1	58	0.0172	-18	c.255 others(35): Show c.2557-351_2557-334delGGAGCCATTCCCCTCTTC		RTEL1	ENSG00000258366.12	transcript	ENST00000360203.11	protein_coding	27/34						chr20	TogoVar
RTF1_chr15_41412095_41488563	41426779	ATATGTGT others(11): Show ATATGTGTGTGTGTGTGTG	A A	intron_variant intron_variant	MODIFIER	HG04199.hp1 NA20905.hp2 HG04199.hp1 NA20905.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0211 a0001c0001t0005g0212 a0001c0001t0005g0211 a0001c0001t0005g0212	2	189	0.0106	-18	c.198 others(35): Show c.198+9468_198+9485delATGTGTGTGTGTGTGTGT		RTF1	ENSG00000137815.15	transcript	ENST00000389629.9	protein_coding	1/17					INFO_REALIGN_3_PRIME	chr15	TogoVar
RTF2_chr20_56463627_56524449	56515595	GAGAGACA others(11): Show GAGAGACACACACACACAC	G G	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG02056.hp2 HG02165.hp1 others(5): Show HG00558.hp1 HG02056.hp2 HG02165.hp1 HG02523.hp2 HG02572.hp2 NA18965.hp2 NA19003.hp1 NA19062.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0009 a0002c0002t0001 a0001c0001t0001 a0001c0001t0009 a0002c0002t0001	a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0079 others(5): Show a0001c0001t0001g0075 a0001c0001t0001g0076 a0001c0001t0001g0079 a0001c0001t0001g0087 a0001c0001t0001g0110 a0001c0001t0001g0115 a0001c0001t0009g0130 a0002c0002t0001g0107	8	184	0.0435	-18	c.592 others(35): Show c.592-1338_592-1321delGAGACACACACACACACA		RTF2	ENSG00000022277.13	transcript	ENST00000357348.10	protein_coding	6/8					INFO_REALIGN_3_PRIME	chr20	TogoVar
RTKN_chr2_74420835_74446937	74443611	GATATAGA others(11): Show GATATAGATAGATATAGAT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02109.hp1 HG02451.hp2 HG02976.hp1 others(4): Show HG02109.hp1 HG02451.hp2 HG02976.hp1 HG03579.hp2 NA18522.hp2 NA19030.hp1 NA20129.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 others(2): Show a0001c0001t0001g0018 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0037 a0001c0001t0001g0042	7	376	0.0186	-18	c.-18 others(29): Show c.-1813_-1796delATCTATATCTATCTATAT		RTKN	ENSG00000114993.17	transcript	ENST00000272430.10	protein_coding					1675		chr2	TogoVar
RTKN_chr2_74420835_74446937	74443617	GATAGATA others(11): Show GATAGATATAGATATAGAT	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00323.hp2 HG00558.hp2 HG00609.hp1 others(116): Show HG00323.hp2 HG00558.hp2 HG00609.hp1 HG00621.hp1 HG00733.hp1 HG00735.hp2 HG01070.hp2 HG01074.hp2 HG01081.hp1 HG01109.hp1 HG01109.hp2 HG01123.hp2 HG01167.hp1 HG01169.hp1 HG01175.hp2 HG01192.hp1 HG01243.hp2 HG01257.hp2 HG01258.hp1 HG01346.hp2 HG01358.hp2 HG01433.hp2 HG01515.hp1 HG01891.hp2 HG01928.hp1 HG01934.hp1 HG01934.hp2 HG01975.hp1 HG01993.hp1 HG01993.hp2 HG02055.hp1 HG02055.hp2 HG02071.hp1 HG02109.hp2 HG02129.hp1 HG02135.hp1 HG02148.hp2 HG02155.hp1 HG02257.hp1 HG02273.hp1 HG02273.hp2 HG02486.hp2 HG02615.hp1 HG02615.hp2 HG02630.hp2 HG02717.hp2 HG02809.hp1 HG02886.hp2 HG02922.hp2 HG03041.hp1 HG03041.hp2 HG03098.hp1 HG03098.hp2 HG03130.hp1 HG03130.hp2 HG03486.hp1 HG03486.hp2 HG03516.hp1 HG03540.hp1 HG03540.hp2 HG03669.hp1 HG03927.hp2 NA18906.hp1 NA18942.hp1 NA18943.hp1 NA18946.hp1 NA18947.hp1 NA18950.hp2 NA18954.hp1 NA18955.hp1 NA18956.hp1 NA18956.hp2 NA18957.hp2 NA18959.hp2 NA18966.hp1 NA18966.hp2 NA18968.hp2 NA18970.hp1 NA18970.hp2 NA18971.hp2 NA18973.hp2 NA18975.hp1 NA18977.hp2 NA18978.hp1 NA18981.hp2 NA18982.hp2 NA18985.hp2 NA18986.hp2 NA18987.hp2 NA18989.hp1 NA18989.hp2 NA18990.hp1 NA18992.hp2 NA18995.hp2 NA19004.hp1 NA19009.hp2 NA19010.hp1 NA19012.hp2 NA19055.hp2 NA19057.hp2 NA19058.hp2 NA19063.hp1 NA19064.hp1 NA19065.hp1 NA19066.hp1 NA19066.hp2 NA19067.hp1 NA19067.hp2 NA19074.hp2 NA19079.hp1 NA19079.hp2 NA19083.hp2 NA19085.hp1 NA19086.hp2 NA19088.hp1 NA19088.hp2 NA19240.hp2 NA20300.hp1 NA20905.hp2	a0001 a0004 a0005 others(1): Show a0001 a0004 a0005 a0006	a0001c0001 a0001c0002 a0004c0004 others(2): Show a0001c0001 a0001c0002 a0004c0004 a0005c0005 a0006c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(5): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0005 a0001c0002t0001 a0004c0004t0001 a0005c0005t0001 a0006c0008t0001	a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(40): Show a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0004 a0001c0001t0001g0007 a0001c0001t0001g0008 a0001c0001t0001g0009 a0001c0001t0001g0010 a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0015 a0001c0001t0001g0016 a0001c0001t0001g0021 a0001c0001t0001g0023 a0001c0001t0001g0026 a0001c0001t0001g0027 a0001c0001t0001g0028 a0001c0001t0001g0030 a0001c0001t0001g0035 a0001c0001t0001g0043 a0001c0001t0001g0054 a0001c0001t0001g0060 a0001c0001t0001g0065 a0001c0001t0001g0070 a0001c0001t0001g0072 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0001g0077 a0001c0001t0001g0085 a0001c0001t0001g0086 a0001c0001t0001g0089 a0001c0001t0001g0096 a0001c0001t0001g0097 a0001c0001t0001g0099 a0001c0001t0001g0101 a0001c0001t0002g0067 a0001c0001t0002g0095 a0001c0001t0003g0017 a0001c0001t0005g0103 a0001c0002t0001g0006 a0004c0004t0001g0045 a0005c0005t0001g0064 a0006c0008t0001g0068	119	154	0.7727	-18	c.-18 others(29): Show c.-1819_-1802delATCTATATCTATATCTAT		RTKN	ENSG00000114993.17	transcript	ENST00000272430.10	protein_coding					1681		chr2	TogoVar
RTL1_chr14_100874753_100908722	100897760	GGGTGGGG others(11): Show GGGTGGGGGGGTGGGGGGC	G G	intron_variant intron_variant	MODIFIER	HG02922.hp2 NA20129.hp2 HG02922.hp2 NA20129.hp2	a0001 a0001	a0001c0003 a0001c0013 a0001c0003 a0001c0013	a0001c0003t0028 a0001c0013t0002 a0001c0003t0028 a0001c0013t0002	a0001c0003t0028g0211 a0001c0013t0002g0149 a0001c0003t0028g0211 a0001c0013t0002g0149	2	428	0.0047	-18	c.-14 others(37): Show c.-148-4273_-148-4256delGCCCCCCACCCCCCCACC		RTL1	ENSG00000254656.3	transcript	ENST00000649591.1	protein_coding	2/3						chr14	TogoVar
RTL4_chrX_112078016_112462514	112082817	GAGAGAGA others(11): Show GAGAGAGAGAGAGAGAGAA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02965.hp1 HG03471.hp1 HG02965.hp1 HG03471.hp1	a0001 a0001	a0001c0002 a0001c0003 a0001c0002 a0001c0003	a0001c0002t0002 a0001c0003t0002 a0001c0002t0002 a0001c0003t0002	a0001c0002t0002g0011 a0001c0003t0002g0012 a0001c0002t0002g0011 a0001c0003t0002g0012	2	132	0.0152	-18	c.-86 others(27): Show c.-863_-846delAGAGAGAGAGAGAGAGAA		RTL4	ENSG00000187823.4	transcript	ENST00000695839.1	protein_coding					198		chrX	TogoVar
RTL4_chrX_112078016_112462514	112419337	CTTTTTTT others(11): Show CTTTTTTTTTTTTTTTTTT	C C	intron_variant intron_variant	MODIFIER	HG02965.hp1 NA19030.hp1 HG02965.hp1 NA19030.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0011 a0001c0002t0002g0112 a0001c0002t0002g0011 a0001c0002t0002g0112	2	26	0.0769	-18	c.-28 others(39): Show c.-284-11753_-284-11736delTTTTTTTTTTTTTTTTTT		RTL4	ENSG00000187823.4	transcript	ENST00000695839.1	protein_coding	3/4					INFO_REALIGN_3_PRIME	chrX	TogoVar
RTL6_chr22_44487583_44503233	44488282	TGGTGTTA others(11): Show TGGTGTTATTGATGTTTTC	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02145.hp2 HG02145.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0001 a0001c0001t0001g0001	1	400	0.0025	-18	c.85 others(29): Show c.8537_*8554delGAAAACATCAATAACACC		RTL6	ENSG00000188636.4	transcript	ENST00000341255.4	protein_coding					4300		chr22	TogoVar
RTN1_chr14_59590983_59875776	59645397	ATTACATG others(11): Show ATTACATGTTTTCTATATG	A A	intron_variant intron_variant	MODIFIER	HG02717.hp2 NA18906.hp2 HG02717.hp2 NA18906.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0009 a0001c0001t0001g0017 a0001c0001t0001g0009 a0001c0001t0001g0017	2	122	0.0164	-18	c.176 others(39): Show c.1766-37923_1766-37906delCATATAGAAAACATGTAA		RTN1	ENSG00000139970.18	transcript	ENST00000267484.10	protein_coding	3/8						chr14	TogoVar
RTN1_chr14_59590983_59875776	59819411	ACCACCCC others(11): Show ACCACCCCCCCCCCACCCC	A A	intron_variant intron_variant	MODIFIER	HG00323.hp2 HG01243.hp1 HG01433.hp2 others(6): Show HG00323.hp2 HG01243.hp1 HG01433.hp2 HG02258.hp1 HG03130.hp1 HG03195.hp2 HG03540.hp2 NA18522.hp1 NA18981.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0001 a0001c0001t0006 a0002c0002t0001 a0001c0001t0001 a0001c0001t0006 a0002c0002t0001	a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0140 others(6): Show a0001c0001t0001g0135 a0001c0001t0001g0136 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0157 a0001c0001t0001g0167 a0001c0001t0001g0168 a0001c0001t0006g0172 a0002c0002t0001g0163	9	130	0.0692	-18	c.241 others(37): Show c.241+50961_241+50978delGGGGTGGGGGGGGGGTGG		RTN1	ENSG00000139970.18	transcript	ENST00000267484.10	protein_coding	1/8						chr14	TogoVar
RTN2_chr19_45480294_45502047	45497698	GTATATAT others(11): Show GTATATATATATATATATA	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG01261.hp1 HG01261.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0136 a0001c0001t0001g0136	1	153	0.0065	-18	c.-89 others(27): Show c.-891_-874delTATATATATATATATATA		RTN2	ENSG00000125744.12	transcript	ENST00000245923.9	protein_coding					652		chr19	TogoVar
RTN3_chr11_63676500_63764882	63735584	CTCTCTCT others(11): Show CTCTCTCTCTCTCTCTCTT	C C	intron_variant intron_variant	MODIFIER	HG01109.hp1 HG02486.hp1 HG03453.hp1 HG01109.hp1 HG02486.hp1 HG03453.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0004 a0002c0002t0004	a0002c0002t0004g0011 a0002c0002t0004g0016 a0002c0002t0004g0018 a0002c0002t0004g0011 a0002c0002t0004g0016 a0002c0002t0004g0018	3	168	0.0179	-18	c.253 others(39): Show c.2531-14403_2531-14386delCTCTCTCTCTCTCTTTCT		RTN3	ENSG00000133318.14	transcript	ENST00000377819.10	protein_coding	3/8					INFO_REALIGN_3_PRIME	chr11	TogoVar
RTN4RL1_chr17_1929677_2030334	1935711	GTATATAT others(11): Show GTATATATATATATATATA	G G	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	NA18998.hp1 NA19079.hp2 NA18998.hp1 NA19079.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0033 a0001c0002t0033	a0001c0002t0033g0125 a0001c0002t0033g0268 a0001c0002t0033g0125 a0001c0002t0033g0268	2	166	0.0120	-18	c.76 others(27): Show c.767_*784delTATATATATATATATATA		RTN4RL1	ENSG00000185924.7	transcript	ENST00000331238.7	protein_coding	2/2				767		chr17	TogoVar
RTP2_chr3_187693259_187707557	187699766	CACACACA others(11): Show CACACACACACACACACAT	C C	intron_variant intron_variant	MODIFIER	NA18940.hp1 NA18940.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0047 a0001c0001t0001g0047	1	420	0.0024	-18	c.165 others(33): Show c.165-773_165-756delATGTGTGTGTGTGTGTGT		RTP2	ENSG00000198471.1	transcript	ENST00000358241.1	protein_coding	1/1						chr3	TogoVar
RTP3_chr3_46492976_46505950	46493833	GCTCTCCC others(11): Show GCTCTCCCTCTCCCTCTCC	G G	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00438.hp2 HG02976.hp2 HG03139.hp1 others(3): Show HG00438.hp2 HG02976.hp2 HG03139.hp1 HG03579.hp1 NA18968.hp1 NA21309.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0001 a0001c0001t0002 a0001c0003t0001 a0001c0001t0001 a0001c0001t0002 a0001c0003t0001	a0001c0001t0001g0004 a0001c0001t0002g0001 a0001c0001t0002g0004 others(1): Show a0001c0001t0001g0004 a0001c0001t0002g0001 a0001c0001t0002g0004 a0001c0003t0001g0020	6	55	0.1091	-18	c.-42 others(29): Show c.-4229_-4212delCTCTCCCTCTCCCTCTCC		RTP3	ENSG00000163825.5	transcript	ENST00000296142.4	protein_coding					4142		chr3	TogoVar
RTP5_chr2_241864729_241878823	241866325	TGCGGGGG others(11): Show TGCGGGGGATGCTGAGCTG	T T	upstream_gene_variant upstream_gene_variant	MODIFIER	NA19077.hp1 NA19077.hp1	a0024 a0024	a0024c0018 a0024c0018	a0024c0018t0009 a0024c0018t0009	a0024c0018t0009g0001 a0024c0018t0009g0001	1	364	0.0027	-18	c.-34 others(29): Show c.-3431_-3414delGCGGGGGATGCTGAGCTG		RTP5	ENSG00000188011.5	transcript	ENST00000343216.3	protein_coding					3403		chr2	TogoVar
RTP5_chr2_241864729_241878823	241876709	GGTCCCAG others(11): Show GGTCCCAGGAGAAACTGGA	G G	downstream_gene_variant downstream_gene_variant	MODIFIER	HG02572.hp2 HG02572.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0006 a0001c0001t0002g0006	1	364	0.0027	-18	c.34 others(29): Show c.3436_*3453delGTCCCAGGAGAAACTGGA		RTP5	ENSG00000188011.5	transcript	ENST00000343216.3	protein_coding					2887		chr2	TogoVar
RTTN_chr18_69998031_70210687	70176188	GATGTAGA others(11): Show GATGTAGATGTAGATGTAT	G G	intron_variant intron_variant	MODIFIER	HG00099.hp2 HG00099.hp2	a0001 a0001	a0001c0011 a0001c0011	a0001c0011t0004 a0001c0011t0004	a0001c0011t0004g0152 a0001c0011t0004g0152	1	154	0.0065	-18	c.147 others(35): Show c.1476+469_1476+486delATACATCTACATCTACAT		RTTN	ENSG00000176225.15	transcript	ENST00000640769.2	protein_coding	11/48						chr18	TogoVar
RTTN_chr18_69998031_70210687	70176194	GATGTAGA others(11): Show GATGTAGATGTATATGTAT	G G	intron_variant intron_variant	MODIFIER	HG02647.hp2 HG03098.hp2 NA18522.hp1 HG02647.hp2 HG03098.hp2 NA18522.hp1	a0001 a0002 a0001 a0002	a0001c0013 a0002c0003 a0001c0013 a0002c0003	a0001c0013t0015 a0001c0013t0016 a0002c0003t0001 a0001c0013t0015 a0001c0013t0016 a0002c0003t0001	a0001c0013t0015g0127 a0001c0013t0016g0129 a0002c0003t0001g0057 a0001c0013t0015g0127 a0001c0013t0016g0129 a0002c0003t0001g0057	3	152	0.0197	-18	c.147 others(35): Show c.1476+463_1476+480delATACATATACATCTACAT		RTTN	ENSG00000176225.15	transcript	ENST00000640769.2	protein_coding	11/48						chr18	TogoVar
RTTN_chr18_69998031_70210687	70176200	GATGTATA others(11): Show GATGTATATGTATATGTAT	G G	intron_variant intron_variant	MODIFIER	HG01243.hp1 HG02055.hp1 HG02109.hp2 others(14): Show HG01243.hp1 HG02055.hp1 HG02109.hp2 HG02257.hp2 HG02559.hp2 HG02735.hp2 HG02809.hp1 HG02922.hp1 HG03041.hp1 HG03098.hp1 HG03225.hp1 HG03540.hp1 HG03579.hp1 HG03927.hp1 HG06807.hp2 NA20805.hp1 NA21309.hp2	a0001 a0001	a0001c0002 a0001c0008 a0001c0009 a0001c0002 a0001c0008 a0001c0009	a0001c0002t0001 a0001c0002t0002 a0001c0008t0008 others(2): Show a0001c0002t0001 a0001c0002t0002 a0001c0008t0008 a0001c0009t0001 a0001c0009t0004	a0001c0002t0001g0035 a0001c0002t0002g0026 a0001c0002t0002g0028 others(14): Show a0001c0002t0001g0035 a0001c0002t0002g0026 a0001c0002t0002g0028 a0001c0002t0002g0030 a0001c0002t0002g0031 a0001c0002t0002g0032 a0001c0002t0002g0033 a0001c0002t0002g0037 a0001c0002t0002g0038 a0001c0002t0002g0041 a0001c0008t0008g0115 a0001c0008t0008g0116 a0001c0008t0008g0117 a0001c0008t0008g0118 a0001c0009t0001g0039 a0001c0009t0001g0040 a0001c0009t0004g0142	17	54	0.3148	-18	c.147 others(35): Show c.1476+457_1476+474delATACATATACATATACAT		RTTN	ENSG00000176225.15	transcript	ENST00000640769.2	protein_coding	11/48						chr18	TogoVar

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