Joint Open Genome and Omics Platform (JoGo)

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ALDH2_chr12_111761933_111822532 / BRCA1_chr17_43039295_43130364 etc.

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Snpeff genename

Sampleids

Snpeff haplotype class

Snpeff annotation impact

Snpeff annotation impact detail

Hapid

Enter haplotype IDs (e.g., a1c1t1g1, a1c1, a1) separated by commas <= a0001 (zero padding also accept)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	achapids	acthapids	actghapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
ATRN_chr20_3466018_3656118	3609753	TAA TAA	T T	intron_variant intron_variant	MODIFIER	HG02109.hp2 HG02451.hp2 HG02559.hp1 others(15): Show HG02109.hp2 HG02451.hp2 HG02559.hp1 HG02615.hp2 HG02622.hp1 HG02647.hp2 HG02717.hp2 HG02897.hp1 HG02965.hp1 HG02970.hp2 HG03098.hp2 HG03139.hp1 HG03195.hp1 HG03225.hp1 HG03471.hp1 HG03579.hp1 HG04199.hp1 NA18522.hp1	a0001 a0002 a0005 others(1): Show a0001 a0002 a0005 a0011	a0001c0002 a0001c0003 a0002c0004 others(3): Show a0001c0002 a0001c0003 a0002c0004 a0002c0012 a0005c0009 a0011c0022	a0001c0002t0004 a0001c0003t0010 a0001c0003t0035 others(8): Show a0001c0002t0004 a0001c0003t0010 a0001c0003t0035 a0002c0004t0004 a0002c0004t0011 a0002c0004t0016 a0002c0012t0012 a0002c0012t0013 a0002c0012t0019 a0005c0009t0004 a0011c0022t0004	a0001c0002t0004g0097 a0001c0003t0010g0206 a0001c0003t0035g0205 others(15): Show a0001c0002t0004g0097 a0001c0003t0010g0206 a0001c0003t0035g0205 a0002c0004t0004g0154 a0002c0004t0004g0159 a0002c0004t0004g0160 a0002c0004t0004g0162 a0002c0004t0011g0150 a0002c0004t0011g0151 a0002c0004t0011g0152 a0002c0004t0016g0155 a0002c0012t0012g0158 a0002c0012t0013g0161 a0002c0012t0019g0157 a0005c0009t0004g0006 a0005c0009t0004g0007 a0005c0009t0004g0008 a0011c0022t0004g0009	18	220	0.0818	-2	c.380 others(21): Show c.3801+5494_3801+5495delAA	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	24/28		INFO_REALIGN_3_PRIME	chr20	TogoVar
ATRN_chr20_3466018_3656118	3626231	CAA CAA	C C	intron_variant intron_variant	MODIFIER	HG00438.hp1 HG00621.hp1 HG00673.hp1 others(12): Show HG00438.hp1 HG00621.hp1 HG00673.hp1 HG01175.hp2 HG02165.hp2 HG02602.hp2 NA18747.hp2 NA18955.hp1 NA18959.hp1 NA18959.hp2 NA18994.hp1 NA19030.hp1 NA19063.hp2 NA19064.hp2 NA20300.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0009 a0001c0001t0030 a0001c0001t0002 a0001c0001t0009 a0001c0001t0030	a0001c0001t0002g0012 a0001c0001t0002g0041 a0001c0001t0002g0106 others(12): Show a0001c0001t0002g0012 a0001c0001t0002g0041 a0001c0001t0002g0106 a0001c0001t0002g0109 a0001c0001t0002g0110 a0001c0001t0002g0112 a0001c0001t0002g0113 a0001c0001t0002g0148 a0001c0001t0009g0046 a0001c0001t0009g0047 a0001c0001t0009g0100 a0001c0001t0009g0101 a0001c0001t0009g0103 a0001c0001t0009g0104 a0001c0001t0030g0143	15	220	0.0682	-2	c.386 others(21): Show c.3863+1678_3863+1679delAA	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	25/28		INFO_REALIGN_3_PRIME	chr20	TogoVar
ATRN_chr20_3466018_3656118	3642240	CCT CCT	C C	intron_variant intron_variant	MODIFIER	HG02622.hp1 HG02922.hp2 HG03098.hp2 others(1): Show HG02622.hp1 HG02922.hp2 HG03098.hp2 NA18522.hp1	a0002 a0008 a0002 a0008	a0002c0004 a0008c0030 a0002c0004 a0008c0030	a0002c0004t0011 a0008c0030t0011 a0002c0004t0011 a0008c0030t0011	a0002c0004t0011g0150 a0002c0004t0011g0151 a0002c0004t0011g0152 others(1): Show a0002c0004t0011g0150 a0002c0004t0011g0151 a0002c0004t0011g0152 a0008c0030t0011g0093	4	220	0.0182	-2	c.405 others(21): Show c.4051-1910_4051-1909delTC	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	27/28		INFO_REALIGN_3_PRIME	chr20	TogoVar
ATRN_chr20_3466018_3656118	3648331	CTG CTG	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00323.hp2 HG01099.hp2 HG00323.hp2 HG01099.hp2	a0006 a0006	a0006c0010 a0006c0010	a0006c0010t0018 a0006c0010t0018	a0006c0010t0018g0126 a0006c0010t0018g0128 a0006c0010t0018g0126 a0006c0010t0018g0128	2	220	0.0091	-2	c.14 others(13): Show c.1485_*1486delTG	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	29/29	1485		chr20	TogoVar
ATRN_chr20_3466018_3656118	3650871	ACT ACT	A A	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG00438.hp1 HG00673.hp1 NA18747.hp2 others(4): Show HG00438.hp1 HG00673.hp1 NA18747.hp2 NA18959.hp1 NA18994.hp1 NA19064.hp2 NA19082.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0009 a0001c0001t0009	a0001c0001t0009g0022 a0001c0001t0009g0046 a0001c0001t0009g0047 others(4): Show a0001c0001t0009g0022 a0001c0001t0009g0046 a0001c0001t0009g0047 a0001c0001t0009g0100 a0001c0001t0009g0101 a0001c0001t0009g0103 a0001c0001t0009g0104	7	220	0.0318	-2	c.40 others(13): Show c.4026_*4027delTC	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding	29/29	4026	INFO_REALIGN_3_PRIME	chr20	TogoVar
ATRN_chr20_3466018_3656118	3653027	TAA TAA	T T	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG00140.hp1 HG00140.hp2 others(45): Show HG00099.hp2 HG00140.hp1 HG00140.hp2 HG00323.hp2 HG00639.hp1 HG00738.hp1 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01074.hp1 HG01099.hp2 HG01106.hp1 HG01169.hp1 HG01496.hp1 HG01517.hp2 HG02015.hp1 HG02055.hp1 HG02109.hp2 HG02257.hp1 HG02451.hp2 HG02486.hp2 HG02559.hp1 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp2 HG02622.hp2 HG02698.hp1 HG02717.hp1 HG02738.hp2 HG02809.hp1 HG02886.hp1 HG02895.hp2 HG02897.hp1 HG02965.hp1 HG02970.hp2 HG03041.hp1 HG03139.hp1 HG03225.hp1 HG03471.hp1 HG03486.hp2 HG03490.hp2 HG03516.hp1 HG03516.hp2 HG03540.hp1 HG03942.hp2 HG04199.hp1 HG04228.hp1	a0001 a0002 a0003 others(5): Show a0001 a0002 a0003 a0005 a0006 a0007 a0009 a0011	a0001c0001 a0001c0002 a0001c0003 others(10): Show a0001c0001 a0001c0002 a0001c0003 a0001c0006 a0001c0013 a0002c0004 a0002c0012 a0003c0008 a0005c0009 a0006c0010 a0007c0015 a0009c0019 a0011c0022	a0001c0001t0005 a0001c0001t0012 a0001c0001t0028 others(18): Show a0001c0001t0005 a0001c0001t0012 a0001c0001t0028 a0001c0002t0003 a0001c0002t0004 a0001c0002t0017 a0001c0003t0005 a0001c0006t0004 a0001c0013t0017 a0002c0004t0004 a0002c0004t0016 a0002c0012t0012 a0003c0008t0005 a0003c0008t0029 a0005c0009t0004 a0006c0010t0005 a0006c0010t0018 a0007c0015t0004 a0007c0015t0024 a0009c0019t0004 a0011c0022t0004	a0001c0001t0005g0015 a0001c0001t0005g0036 a0001c0001t0005g0056 others(45): Show a0001c0001t0005g0015 a0001c0001t0005g0036 a0001c0001t0005g0056 a0001c0001t0005g0061 a0001c0001t0005g0064 a0001c0001t0005g0068 a0001c0001t0005g0080 a0001c0001t0005g0120 a0001c0001t0005g0121 a0001c0001t0005g0138 a0001c0001t0005g0175 a0001c0001t0012g0115 a0001c0001t0012g0133 a0001c0001t0028g0017 a0001c0002t0003g0075 a0001c0002t0004g0030 a0001c0002t0004g0055 a0001c0002t0004g0091 a0001c0002t0004g0092 a0001c0002t0004g0097 a0001c0002t0004g0124 a0001c0002t0004g0134 a0001c0002t0017g0079 a0001c0003t0005g0178 a0001c0003t0005g0190 a0001c0006t0004g0177 a0001c0006t0004g0186 a0001c0013t0017g0149 a0002c0004t0004g0154 a0002c0004t0004g0159 a0002c0004t0004g0160 a0002c0004t0004g0162 a0002c0004t0016g0155 a0002c0004t0016g0156 a0002c0012t0012g0158 a0003c0008t0005g0197 a0003c0008t0005g0198 a0003c0008t0029g0196 a0005c0009t0004g0006 a0005c0009t0004g0007 a0005c0009t0004g0008 a0006c0010t0005g0127 a0006c0010t0018g0126 a0006c0010t0018g0128 a0007c0015t0004g0026 a0007c0015t0024g0137 a0009c0019t0004g0210 a0011c0022t0004g0009	48	220	0.2182	-2	c.61 others(13): Show c.6181_*6182delAA	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding		1910		chr20	TogoVar
ATRN_chr20_3466018_3656118	3654923	CAA CAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG00323.hp2 HG00438.hp2 others(56): Show HG00099.hp2 HG00323.hp2 HG00438.hp2 HG00621.hp2 HG00639.hp2 HG00733.hp1 HG00735.hp2 HG01070.hp1 HG01070.hp2 HG01071.hp1 HG01071.hp2 HG01074.hp2 HG01099.hp2 HG01169.hp1 HG01257.hp2 HG01261.hp1 HG01358.hp1 HG01361.hp1 HG01496.hp2 HG01517.hp2 HG01952.hp2 HG02015.hp1 HG02015.hp2 HG02055.hp2 HG02165.hp1 HG02293.hp2 HG02300.hp1 HG02300.hp2 HG02602.hp1 HG02698.hp1 HG02698.hp2 HG02738.hp1 HG02738.hp2 HG02809.hp2 HG03453.hp1 HG03490.hp1 HG03710.hp2 HG03942.hp1 HG04115.hp2 HG04228.hp1 NA18612.hp1 NA18952.hp1 NA18953.hp1 NA18955.hp2 NA18957.hp1 NA18959.hp2 NA18961.hp1 NA18961.hp2 NA18966.hp2 NA18985.hp2 NA18994.hp2 NA19063.hp1 NA19063.hp2 NA19075.hp1 NA19081.hp2 NA19082.hp2 NA19086.hp1 NA19086.hp2 NA20300.hp2	a0001 a0006 a0012 others(2): Show a0001 a0006 a0012 a0016 a0017	a0001c0001 a0001c0002 a0001c0003 others(5): Show a0001c0001 a0001c0002 a0001c0003 a0001c0014 a0006c0010 a0012c0029 a0016c0028 a0017c0032	a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0005 a0001c0001t0028 a0001c0002t0032 a0001c0003t0031 a0001c0014t0002 a0006c0010t0005 a0006c0010t0018 a0012c0029t0002 a0016c0028t0001 a0017c0032t0001	a0001c0001t0001g0003 a0001c0001t0001g0013 a0001c0001t0001g0014 others(56): Show a0001c0001t0001g0003 a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0016 a0001c0001t0001g0019 a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0027 a0001c0001t0001g0031 a0001c0001t0001g0039 a0001c0001t0001g0042 a0001c0001t0001g0043 a0001c0001t0001g0044 a0001c0001t0001g0048 a0001c0001t0001g0057 a0001c0001t0001g0059 a0001c0001t0001g0066 a0001c0001t0001g0070 a0001c0001t0001g0071 a0001c0001t0001g0072 a0001c0001t0001g0108 a0001c0001t0001g0111 a0001c0001t0001g0114 a0001c0001t0001g0123 a0001c0001t0001g0125 a0001c0001t0001g0140 a0001c0001t0001g0141 a0001c0001t0001g0163 a0001c0001t0001g0172 a0001c0001t0002g0040 a0001c0001t0002g0041 a0001c0001t0002g0060 a0001c0001t0002g0077 a0001c0001t0002g0102 a0001c0001t0002g0106 a0001c0001t0002g0116 a0001c0001t0002g0118 a0001c0001t0002g0119 a0001c0001t0002g0144 a0001c0001t0005g0015 a0001c0001t0005g0036 a0001c0001t0005g0056 a0001c0001t0005g0061 a0001c0001t0005g0080 a0001c0001t0005g0120 a0001c0001t0005g0121 a0001c0001t0005g0138 a0001c0001t0005g0175 a0001c0001t0028g0017 a0001c0002t0032g0033 a0001c0003t0031g0218 a0001c0014t0002g0170 a0001c0014t0002g0174 a0006c0010t0005g0127 a0006c0010t0018g0126 a0006c0010t0018g0128 a0012c0029t0002g0122 a0016c0028t0001g0074 a0017c0032t0001g0195	59	220	0.2682	-2	c.80 others(13): Show c.8077_*8078delAA	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding		3806		chr20	TogoVar
ATRN_chr20_3466018_3656118	3656055	CAA CAA	C C	downstream_gene_variant downstream_gene_variant	MODIFIER	HG00099.hp2 HG00323.hp2 HG01070.hp1 others(10): Show HG00099.hp2 HG00323.hp2 HG01070.hp1 HG01071.hp1 HG01071.hp2 HG01099.hp2 HG01169.hp1 HG01517.hp2 HG02015.hp1 HG02602.hp1 HG02698.hp1 HG02738.hp2 HG04228.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0006c0010 a0001c0001 a0006c0010	a0001c0001t0005 a0001c0001t0028 a0006c0010t0005 others(1): Show a0001c0001t0005 a0001c0001t0028 a0006c0010t0005 a0006c0010t0018	a0001c0001t0005g0015 a0001c0001t0005g0036 a0001c0001t0005g0056 others(10): Show a0001c0001t0005g0015 a0001c0001t0005g0036 a0001c0001t0005g0056 a0001c0001t0005g0061 a0001c0001t0005g0080 a0001c0001t0005g0120 a0001c0001t0005g0121 a0001c0001t0005g0138 a0001c0001t0005g0175 a0001c0001t0028g0017 a0006c0010t0005g0127 a0006c0010t0018g0126 a0006c0010t0018g0128	13	220	0.0591	-2	c.92 others(13): Show c.9209_*9210delAA	ATRN	ENSG00000088812.18	transcript	ENST00000262919.10	protein_coding		4938		chr20	TogoVar
ATRX_chrX_77499880_77791216	77506897	CTT CTT	C C	3_prime_UTR_variant 3_prime_UTR_variant	MODIFIER	HG01109.hp1 HG02280.hp1 HG02895.hp1 others(4): Show HG01109.hp1 HG02280.hp1 HG02895.hp1 HG03209.hp1 HG03471.hp1 NA18970.hp1 NA19030.hp2	a0001 a0005 a0001 a0005	a0001c0001 a0005c0009 a0001c0001 a0005c0009	a0001c0001t0007 a0001c0001t0010 a0001c0001t0018 others(1): Show a0001c0001t0007 a0001c0001t0010 a0001c0001t0018 a0005c0009t0010	a0001c0001t0007g0066 a0001c0001t0007g0067 a0001c0001t0007g0068 others(4): Show a0001c0001t0007g0066 a0001c0001t0007g0067 a0001c0001t0007g0068 a0001c0001t0007g0070 a0001c0001t0010g0083 a0001c0001t0018g0193 a0005c0009t0010g0086	7	218	0.0321	-2	c.14 others(13): Show c.1452_*1453delAA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	35/35	1452		chrX	TogoVar
ATRX_chrX_77499880_77791216	77523038	CTT CTT	C C	intron_variant intron_variant	MODIFIER	NA19240.hp2 NA19240.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0135 a0001c0001t0005g0135	1	218	0.0046	-2	c.684 others(19): Show c.6849+212_6849+213delAA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	31/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77537386	CAT CAT	C C	intron_variant intron_variant	MODIFIER	NA19083.hp1 NA19083.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0003 a0002c0002t0003	a0002c0002t0003g0019 a0002c0002t0003g0019	1	218	0.0046	-2	c.670 others(23): Show c.6700-13987_6700-13986delAT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	30/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77538230	AAC AAC	A A	intron_variant intron_variant	MODIFIER	HG02071.hp1 HG02071.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0206 a0002c0002t0002g0206	1	218	0.0046	-2	c.670 others(23): Show c.6700-14831_6700-14830delGT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	30/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77543957	AAT AAT	A A	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG00323.hp1 others(129): Show HG00140.hp1 HG00280.hp1 HG00323.hp1 HG00558.hp1 HG00597.hp2 HG00642.hp1 HG01070.hp2 HG01081.hp1 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01167.hp1 HG01192.hp1 HG01243.hp1 HG01256.hp1 HG01257.hp1 HG01261.hp1 HG01358.hp1 HG01496.hp1 HG01516.hp2 HG01517.hp2 HG01928.hp1 HG01934.hp1 HG01952.hp1 HG01975.hp1 HG01975.hp2 HG02015.hp1 HG02027.hp1 HG02055.hp1 HG02071.hp1 HG02074.hp1 HG02080.hp1 HG02083.hp1 HG02132.hp1 HG02145.hp1 HG02165.hp1 HG02257.hp1 HG02257.hp2 HG02258.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02451.hp1 HG02451.hp2 HG02559.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp1 HG02615.hp2 HG02647.hp1 HG02683.hp2 HG02717.hp1 HG02723.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp1 HG02809.hp2 HG02895.hp1 HG02922.hp1 HG02965.hp1 HG02970.hp2 HG03017.hp1 HG03195.hp1 HG03195.hp2 HG03209.hp1 HG03225.hp1 HG03239.hp2 HG03453.hp2 HG03471.hp1 HG03486.hp1 HG03490.hp1 HG03492.hp1 HG03540.hp1 HG03540.hp2 HG03579.hp1 HG03688.hp1 HG03831.hp2 HG03927.hp2 HG03942.hp1 HG04115.hp1 HG04184.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18906.hp2 NA18947.hp2 NA18948.hp1 NA18955.hp1 NA18959.hp1 NA18961.hp1 NA18962.hp1 NA18964.hp2 NA18965.hp1 NA18967.hp1 NA18969.hp1 NA18970.hp1 NA18973.hp1 NA18977.hp1 NA18982.hp1 NA18984.hp1 NA18986.hp1 NA18988.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA19000.hp1 NA19001.hp1 NA19001.hp2 NA19003.hp1 NA19011.hp1 NA19030.hp2 NA19043.hp1 NA19056.hp1 NA19058.hp1 NA19060.hp1 NA19070.hp1 NA19074.hp1 NA19074.hp2 NA19080.hp2 NA19083.hp1 NA19084.hp2 NA19088.hp1 NA19091.hp1 NA19240.hp2 NA20129.hp1 NA20129.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(2): Show a0001 a0002 a0003 a0005 a0006	a0001c0001 a0001c0005 a0001c0007 others(6): Show a0001c0001 a0001c0005 a0001c0007 a0001c0010 a0002c0002 a0002c0004 a0003c0006 a0005c0009 a0006c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(26): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0008 a0001c0001t0010 a0001c0001t0011 a0001c0001t0017 a0001c0001t0018 a0001c0001t0020 a0001c0001t0021 a0001c0005t0005 a0001c0007t0005 a0001c0010t0006 a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 a0002c0002t0006 a0002c0002t0013 a0002c0002t0015 a0002c0002t0016 a0002c0004t0001 a0002c0004t0003 a0003c0006t0001 a0005c0009t0010 a0006c0008t0003	a0001c0001t0001g0087 a0001c0001t0001g0195 a0001c0001t0001g0198 others(129): Show a0001c0001t0001g0087 a0001c0001t0001g0195 a0001c0001t0001g0198 a0001c0001t0002g0158 a0001c0001t0002g0178 a0001c0001t0002g0184 a0001c0001t0002g0199 a0001c0001t0003g0084 a0001c0001t0003g0085 a0001c0001t0003g0088 a0001c0001t0003g0115 a0001c0001t0003g0137 a0001c0001t0003g0138 a0001c0001t0003g0162 a0001c0001t0003g0163 a0001c0001t0003g0164 a0001c0001t0003g0196 a0001c0001t0003g0200 a0001c0001t0003g0201 a0001c0001t0003g0202 a0001c0001t0004g0122 a0001c0001t0004g0185 a0001c0001t0004g0186 a0001c0001t0004g0187 a0001c0001t0004g0188 a0001c0001t0004g0190 a0001c0001t0004g0191 a0001c0001t0004g0192 a0001c0001t0004g0194 a0001c0001t0004g0205 a0001c0001t0004g0218 a0001c0001t0005g0069 a0001c0001t0005g0073 a0001c0001t0005g0074 a0001c0001t0005g0075 a0001c0001t0005g0135 a0001c0001t0005g0213 a0001c0001t0006g0179 a0001c0001t0007g0066 a0001c0001t0007g0067 a0001c0001t0007g0068 a0001c0001t0007g0070 a0001c0001t0008g0005 a0001c0001t0008g0006 a0001c0001t0008g0077 a0001c0001t0010g0083 a0001c0001t0011g0001 a0001c0001t0017g0183 a0001c0001t0018g0193 a0001c0001t0020g0180 a0001c0001t0021g0078 a0001c0005t0005g0076 a0001c0005t0005g0081 a0001c0005t0005g0082 a0001c0007t0005g0079 a0001c0010t0006g0197 a0002c0002t0001g0010 a0002c0002t0001g0011 a0002c0002t0001g0013 a0002c0002t0001g0014 a0002c0002t0001g0016 a0002c0002t0001g0017 a0002c0002t0001g0018 a0002c0002t0001g0022 a0002c0002t0001g0024 a0002c0002t0001g0026 a0002c0002t0001g0028 a0002c0002t0001g0029 a0002c0002t0001g0033 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0001g0038 a0002c0002t0001g0039 a0002c0002t0001g0040 a0002c0002t0001g0041 a0002c0002t0001g0042 a0002c0002t0001g0044 a0002c0002t0001g0045 a0002c0002t0001g0049 a0002c0002t0001g0050 a0002c0002t0001g0054 a0002c0002t0001g0058 a0002c0002t0001g0059 a0002c0002t0001g0060 a0002c0002t0001g0061 a0002c0002t0001g0062 a0002c0002t0001g0063 a0002c0002t0001g0097 a0002c0002t0001g0109 a0002c0002t0001g0114 a0002c0002t0001g0117 a0002c0002t0001g0140 a0002c0002t0001g0141 a0002c0002t0001g0204 a0002c0002t0001g0209 a0002c0002t0002g0007 a0002c0002t0002g0012 a0002c0002t0002g0020 a0002c0002t0002g0032 a0002c0002t0002g0037 a0002c0002t0002g0047 a0002c0002t0002g0048 a0002c0002t0002g0051 a0002c0002t0002g0052 a0002c0002t0002g0053 a0002c0002t0002g0057 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0110 a0002c0002t0002g0206 a0002c0002t0002g0208 a0002c0002t0002g0210 a0002c0002t0003g0019 a0002c0002t0003g0021 a0002c0002t0003g0025 a0002c0002t0003g0027 a0002c0002t0003g0177 a0002c0002t0006g0056 a0002c0002t0006g0207 a0002c0002t0013g0008 a0002c0002t0015g0043 a0002c0002t0016g0046 a0002c0004t0001g0009 a0002c0004t0001g0023 a0002c0004t0001g0031 a0002c0004t0001g0055 a0002c0004t0003g0030 a0003c0006t0001g0015 a0003c0006t0001g0159 a0005c0009t0010g0086 a0006c0008t0003g0203	132	218	0.6055	-2	c.669 others(23): Show c.6699+13492_6699+13493delAT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	30/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77545601	TGA TGA	T T	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01192.hp1	a0003 a0003	a0003c0006 a0003c0006	a0003c0006t0001 a0003c0006t0001	a0003c0006t0001g0015 a0003c0006t0001g0015	1	218	0.0046	-2	c.669 others(23): Show c.6699+11848_6699+11849delTC	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	30/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77556293	GGA GGA	G G	intron_variant intron_variant	MODIFIER	HG02559.hp2 HG02559.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0005 a0001c0001t0005	a0001c0001t0005g0069 a0001c0001t0005g0069	1	218	0.0046	-2	c.669 others(21): Show c.6699+1156_6699+1157delTC	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	30/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77559449	CTT CTT	C C	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG00323.hp1 others(89): Show HG00140.hp1 HG00280.hp1 HG00323.hp1 HG00558.hp1 HG00642.hp1 HG01070.hp2 HG01081.hp1 HG01099.hp1 HG01106.hp1 HG01167.hp1 HG01192.hp1 HG01256.hp1 HG01257.hp1 HG01257.hp2 HG01261.hp1 HG01358.hp1 HG01496.hp1 HG01516.hp2 HG01517.hp2 HG01928.hp1 HG01934.hp1 HG01952.hp1 HG01975.hp1 HG01975.hp2 HG02015.hp1 HG02055.hp1 HG02071.hp1 HG02074.hp1 HG02132.hp1 HG02145.hp1 HG02165.hp1 HG02273.hp2 HG02280.hp1 HG02280.hp2 HG02572.hp1 HG02602.hp1 HG02615.hp1 HG02647.hp1 HG02717.hp1 HG02723.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp1 HG02965.hp1 HG03017.hp1 HG03195.hp1 HG03195.hp2 HG03471.hp1 HG03486.hp1 HG03490.hp1 HG03492.hp1 HG03540.hp2 HG03579.hp1 HG03831.hp2 HG03927.hp2 HG04199.hp1 HG04204.hp1 HG04228.hp1 NA18947.hp2 NA18948.hp1 NA18959.hp1 NA18961.hp1 NA18962.hp1 NA18967.hp1 NA18969.hp1 NA18970.hp1 NA18977.hp1 NA18982.hp1 NA18984.hp1 NA18986.hp1 NA18988.hp1 NA18990.hp1 NA18992.hp1 NA19000.hp1 NA19001.hp1 NA19001.hp2 NA19003.hp1 NA19011.hp1 NA19030.hp2 NA19058.hp1 NA19060.hp1 NA19070.hp1 NA19074.hp1 NA19074.hp2 NA19083.hp1 NA19091.hp1 NA20129.hp1 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp1 homoSapiens_chm13v2.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0006	a0001c0001 a0001c0010 a0002c0002 others(3): Show a0001c0001 a0001c0010 a0002c0002 a0002c0004 a0003c0006 a0006c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(19): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0005 a0001c0001t0006 a0001c0001t0007 a0001c0001t0010 a0001c0001t0017 a0001c0001t0018 a0001c0010t0006 a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 a0002c0002t0006 a0002c0002t0013 a0002c0002t0015 a0002c0002t0016 a0002c0004t0001 a0002c0004t0003 a0003c0006t0001 a0006c0008t0003	a0001c0001t0001g0087 a0001c0001t0001g0132 a0001c0001t0001g0195 others(89): Show a0001c0001t0001g0087 a0001c0001t0001g0132 a0001c0001t0001g0195 a0001c0001t0002g0158 a0001c0001t0002g0184 a0001c0001t0002g0199 a0001c0001t0003g0084 a0001c0001t0003g0085 a0001c0001t0003g0137 a0001c0001t0003g0138 a0001c0001t0003g0162 a0001c0001t0003g0164 a0001c0001t0003g0200 a0001c0001t0004g0186 a0001c0001t0004g0187 a0001c0001t0004g0188 a0001c0001t0004g0190 a0001c0001t0004g0191 a0001c0001t0004g0192 a0001c0001t0004g0218 a0001c0001t0005g0073 a0001c0001t0005g0075 a0001c0001t0005g0213 a0001c0001t0006g0179 a0001c0001t0007g0066 a0001c0001t0007g0067 a0001c0001t0010g0083 a0001c0001t0017g0183 a0001c0001t0018g0193 a0001c0010t0006g0197 a0002c0002t0001g0010 a0002c0002t0001g0011 a0002c0002t0001g0013 a0002c0002t0001g0016 a0002c0002t0001g0017 a0002c0002t0001g0022 a0002c0002t0001g0024 a0002c0002t0001g0026 a0002c0002t0001g0028 a0002c0002t0001g0029 a0002c0002t0001g0033 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0038 a0002c0002t0001g0040 a0002c0002t0001g0041 a0002c0002t0001g0045 a0002c0002t0001g0049 a0002c0002t0001g0050 a0002c0002t0001g0054 a0002c0002t0001g0058 a0002c0002t0001g0059 a0002c0002t0001g0060 a0002c0002t0001g0109 a0002c0002t0001g0114 a0002c0002t0001g0117 a0002c0002t0001g0140 a0002c0002t0001g0141 a0002c0002t0001g0204 a0002c0002t0001g0209 a0002c0002t0002g0007 a0002c0002t0002g0012 a0002c0002t0002g0020 a0002c0002t0002g0032 a0002c0002t0002g0037 a0002c0002t0002g0048 a0002c0002t0002g0051 a0002c0002t0002g0053 a0002c0002t0002g0057 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0110 a0002c0002t0002g0206 a0002c0002t0002g0208 a0002c0002t0002g0210 a0002c0002t0003g0019 a0002c0002t0003g0021 a0002c0002t0003g0025 a0002c0002t0003g0027 a0002c0002t0006g0056 a0002c0002t0006g0207 a0002c0002t0013g0008 a0002c0002t0015g0043 a0002c0002t0016g0046 a0002c0004t0001g0009 a0002c0004t0001g0023 a0002c0004t0001g0031 a0002c0004t0001g0055 a0002c0004t0003g0030 a0003c0006t0001g0015 a0003c0006t0001g0159 a0006c0008t0003g0203	92	218	0.4220	-2	c.632 others(19): Show c.6327-605_6327-604delAA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	28/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77563702	CGT CGT	C C	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG01070.hp1 HG01070.hp2 others(18): Show HG00642.hp1 HG01070.hp1 HG01070.hp2 HG01109.hp1 HG01516.hp2 HG01517.hp2 HG02080.hp1 HG02145.hp1 HG02257.hp1 HG02280.hp1 HG02602.hp1 HG02723.hp2 HG02809.hp1 HG02809.hp2 HG02965.hp1 HG03239.hp2 HG03579.hp1 HG04184.hp2 NA19007.hp1 NA20752.hp1 NA21309.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0005 a0002c0002 others(1): Show a0001c0001 a0001c0005 a0002c0002 a0005c0009	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(9): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0010 a0001c0001t0011 a0001c0005t0005 a0002c0002t0001 a0002c0002t0002 a0002c0002t0006 a0002c0002t0013 a0002c0002t0016 a0005c0009t0010	a0001c0001t0001g0087 a0001c0001t0002g0072 a0001c0001t0002g0142 others(18): Show a0001c0001t0001g0087 a0001c0001t0002g0072 a0001c0001t0002g0142 a0001c0001t0002g0158 a0001c0001t0003g0084 a0001c0001t0003g0085 a0001c0001t0003g0088 a0001c0001t0003g0162 a0001c0001t0003g0163 a0001c0001t0003g0164 a0001c0001t0010g0083 a0001c0001t0011g0001 a0001c0005t0005g0082 a0002c0002t0001g0045 a0002c0002t0002g0012 a0002c0002t0002g0047 a0002c0002t0002g0048 a0002c0002t0006g0207 a0002c0002t0013g0008 a0002c0002t0016g0046 a0005c0009t0010g0086	21	218	0.0963	-2	c.632 others(21): Show c.6327-4858_6327-4857delAC	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	28/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77583353	GTC GTC	G G	intron_variant intron_variant	MODIFIER	NA19063.hp1 NA19063.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0107 a0001c0001t0002g0107	1	218	0.0046	-2	c.621 others(21): Show c.6217+6479_6217+6480delGA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	27/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77585583	CAA CAA	C C	intron_variant intron_variant	MODIFIER	HG00558.hp2 HG00597.hp1 HG00621.hp1 others(23): Show HG00558.hp2 HG00597.hp1 HG00621.hp1 HG00673.hp1 HG01069.hp1 HG01255.hp1 HG02056.hp1 HG02129.hp1 HG02135.hp1 HG02486.hp1 HG02559.hp1 HG02922.hp2 HG03209.hp1 HG03471.hp1 NA18906.hp1 NA18943.hp1 NA18971.hp1 NA18983.hp1 NA19005.hp1 NA19012.hp1 NA19055.hp1 NA19063.hp1 NA19066.hp1 NA19079.hp1 NA19080.hp1 NA19085.hp1	a0001 a0004 a0001 a0004	a0001c0001 a0001c0003 a0001c0012 others(1): Show a0001c0001 a0001c0003 a0001c0012 a0004c0011	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(4): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0007 a0001c0003t0001 a0001c0012t0001 a0004c0011t0002	a0001c0001t0001g0160 a0001c0001t0002g0071 a0001c0001t0002g0090 others(23): Show a0001c0001t0001g0160 a0001c0001t0002g0071 a0001c0001t0002g0090 a0001c0001t0002g0100 a0001c0001t0002g0101 a0001c0001t0002g0105 a0001c0001t0002g0106 a0001c0001t0002g0107 a0001c0001t0002g0128 a0001c0001t0002g0145 a0001c0001t0002g0146 a0001c0001t0002g0168 a0001c0001t0002g0169 a0001c0001t0002g0170 a0001c0001t0002g0172 a0001c0001t0002g0173 a0001c0001t0002g0181 a0001c0001t0002g0189 a0001c0001t0002g0215 a0001c0001t0003g0112 a0001c0001t0007g0067 a0001c0001t0007g0070 a0001c0003t0001g0094 a0001c0003t0001g0136 a0001c0012t0001g0111 a0004c0011t0002g0093	26	218	0.1193	-2	c.621 others(21): Show c.6217+4249_6217+4250delTT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	27/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77599604	CAA CAA	C C	intron_variant intron_variant	MODIFIER	NA19070.hp1 NA19070.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0114 a0002c0002t0001g0114	1	218	0.0046	-2	c.578 others(17): Show c.5787-26_5787-25delTT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	24/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77607708	CAA CAA	C C	intron_variant intron_variant	MODIFIER	HG02615.hp2 HG02809.hp2 HG02895.hp1 others(4): Show HG02615.hp2 HG02809.hp2 HG02895.hp1 HG02970.hp2 HG03225.hp1 HG04228.hp1 NA18992.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0005 a0001c0007 others(1): Show a0001c0001 a0001c0005 a0001c0007 a0002c0002	a0001c0001t0007 a0001c0005t0005 a0001c0007t0005 others(1): Show a0001c0001t0007 a0001c0005t0005 a0001c0007t0005 a0002c0002t0002	a0001c0001t0007g0068 a0001c0005t0005g0076 a0001c0005t0005g0081 others(4): Show a0001c0001t0007g0068 a0001c0005t0005g0076 a0001c0005t0005g0081 a0001c0005t0005g0082 a0001c0007t0005g0079 a0002c0002t0002g0032 a0002c0002t0002g0037	7	218	0.0321	-2	c.556 others(21): Show c.5567-7146_5567-7145delTT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	22/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77626028	CAT CAT	C C	intron_variant intron_variant	MODIFIER	HG01074.hp1 HG01106.hp1 HG01109.hp1 others(25): Show HG01074.hp1 HG01106.hp1 HG01109.hp1 HG01496.hp1 HG01934.hp1 HG02129.hp1 HG02132.hp1 HG02135.hp1 HG02165.hp1 HG02165.hp2 HG02257.hp2 HG02280.hp1 HG02451.hp2 HG02602.hp1 HG02895.hp1 HG02965.hp1 HG03017.hp1 HG03195.hp2 HG03540.hp1 NA18964.hp2 NA18967.hp1 NA18969.hp2 NA19058.hp1 NA19060.hp1 NA19074.hp2 NA19079.hp1 NA19085.hp1 NA20129.hp1	a0001 a0002 a0003 others(1): Show a0001 a0002 a0003 a0005	a0001c0001 a0002c0002 a0002c0004 others(2): Show a0001c0001 a0002c0002 a0002c0004 a0003c0006 a0005c0009	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(11): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0007 a0001c0001t0010 a0001c0001t0020 a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 a0002c0002t0015 a0002c0004t0001 a0003c0006t0001 a0005c0009t0010	a0001c0001t0001g0108 a0001c0001t0001g0154 a0001c0001t0001g0157 others(25): Show a0001c0001t0001g0108 a0001c0001t0001g0154 a0001c0001t0001g0157 a0001c0001t0002g0145 a0001c0001t0002g0146 a0001c0001t0002g0169 a0001c0001t0002g0172 a0001c0001t0002g0199 a0001c0001t0003g0085 a0001c0001t0003g0115 a0001c0001t0003g0138 a0001c0001t0003g0164 a0001c0001t0003g0196 a0001c0001t0004g0192 a0001c0001t0007g0068 a0001c0001t0010g0083 a0001c0001t0020g0180 a0002c0002t0001g0044 a0002c0002t0001g0140 a0002c0002t0002g0007 a0002c0002t0002g0057 a0002c0002t0002g0208 a0002c0002t0003g0025 a0002c0002t0015g0043 a0002c0004t0001g0023 a0002c0004t0001g0055 a0003c0006t0001g0159 a0005c0009t0010g0086	28	218	0.1284	-2	c.513 others(21): Show c.5135-5498_5135-5497delAT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	19/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77626083	ATG ATG	A A	intron_variant intron_variant	MODIFIER	NA20129.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0008 a0001c0001t0008	a0001c0001t0008g0005 a0001c0001t0008g0005	1	218	0.0046	-2	c.513 others(21): Show c.5135-5553_5135-5552delCA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	19/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77637939	CAA CAA	C C	intron_variant intron_variant	MODIFIER	HG02015.hp1 HG04228.hp1 HG02015.hp1 HG04228.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0004 a0002c0002t0002 a0001c0001t0004 a0002c0002t0002	a0001c0001t0004g0188 a0002c0002t0002g0037 a0001c0001t0004g0188 a0002c0002t0002g0037	2	218	0.0092	-2	c.455 others(21): Show c.4558-1885_4558-1884delTT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	15/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77648162	AAG AAG	A A	intron_variant intron_variant	MODIFIER	HG01192.hp1 HG01192.hp1	a0003 a0003	a0003c0006 a0003c0006	a0003c0006t0001 a0003c0006t0001	a0003c0006t0001g0015 a0003c0006t0001g0015	1	218	0.0046	-2	c.455 others(21): Show c.4557+3950_4557+3951delCT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	15/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77651217	CAA CAA	C C	intron_variant intron_variant	MODIFIER	HG00621.hp1 NA18992.hp2 NA20129.hp2 HG00621.hp1 NA18992.hp2 NA20129.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0008 a0001c0001t0001 a0001c0001t0002 a0001c0001t0008	a0001c0001t0001g0116 a0001c0001t0002g0168 a0001c0001t0008g0005 a0001c0001t0001g0116 a0001c0001t0002g0168 a0001c0001t0008g0005	3	218	0.0138	-2	c.455 others(19): Show c.4557+895_4557+896delTT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	15/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77653004	TAA TAA	T T	intron_variant intron_variant	MODIFIER	NA18988.hp1 NA18988.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0058 a0002c0002t0001g0058	1	218	0.0046	-2	c.431 others(19): Show c.4318-653_4318-652delTT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	14/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77659482	TAC TAC	T T	intron_variant intron_variant	MODIFIER	HG00140.hp1 HG00280.hp1 HG00323.hp1 others(72): Show HG00140.hp1 HG00280.hp1 HG00323.hp1 HG00597.hp2 HG00642.hp1 HG01070.hp2 HG01081.hp1 HG01099.hp1 HG01106.hp1 HG01109.hp1 HG01256.hp1 HG01257.hp1 HG01261.hp1 HG01358.hp1 HG01496.hp1 HG01516.hp2 HG01517.hp2 HG01928.hp1 HG01934.hp1 HG01952.hp1 HG01975.hp1 HG02027.hp1 HG02071.hp1 HG02074.hp1 HG02080.hp1 HG02083.hp1 HG02145.hp1 HG02258.hp1 HG02273.hp2 HG02451.hp1 HG02602.hp1 HG02615.hp2 HG02683.hp2 HG02735.hp1 HG02738.hp1 HG02809.hp2 HG02965.hp1 HG02970.hp2 HG03225.hp1 HG03239.hp2 HG03490.hp1 HG03492.hp1 HG03540.hp1 HG03831.hp2 HG03942.hp1 HG04228.hp1 NA18947.hp2 NA18955.hp1 NA18959.hp1 NA18961.hp1 NA18964.hp2 NA18967.hp1 NA18977.hp1 NA18982.hp1 NA18986.hp1 NA18988.hp1 NA18990.hp1 NA18992.hp1 NA18995.hp1 NA19000.hp1 NA19001.hp1 NA19003.hp1 NA19011.hp1 NA19056.hp1 NA19058.hp1 NA19060.hp1 NA19083.hp1 NA19088.hp1 NA19091.hp1 NA20129.hp2 NA20752.hp1 NA20805.hp1 NA20905.hp1 NA21309.hp2 homoSapiens_chm13v2.hp1	a0001 a0002 a0005 a0001 a0002 a0005	a0001c0001 a0001c0005 a0001c0007 others(3): Show a0001c0001 a0001c0005 a0001c0007 a0002c0002 a0002c0004 a0005c0009	a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 others(13): Show a0001c0001t0002 a0001c0001t0003 a0001c0001t0008 a0001c0001t0011 a0001c0001t0020 a0001c0005t0005 a0001c0007t0005 a0002c0002t0001 a0002c0002t0002 a0002c0002t0003 a0002c0002t0006 a0002c0002t0013 a0002c0002t0016 a0002c0004t0001 a0002c0004t0003 a0005c0009t0010	a0001c0001t0002g0182 a0001c0001t0003g0085 a0001c0001t0003g0164 others(72): Show a0001c0001t0002g0182 a0001c0001t0003g0085 a0001c0001t0003g0164 a0001c0001t0003g0202 a0001c0001t0008g0005 a0001c0001t0008g0006 a0001c0001t0011g0001 a0001c0001t0020g0180 a0001c0005t0005g0076 a0001c0005t0005g0081 a0001c0005t0005g0082 a0001c0007t0005g0079 a0002c0002t0001g0010 a0002c0002t0001g0011 a0002c0002t0001g0013 a0002c0002t0001g0014 a0002c0002t0001g0016 a0002c0002t0001g0017 a0002c0002t0001g0018 a0002c0002t0001g0022 a0002c0002t0001g0024 a0002c0002t0001g0026 a0002c0002t0001g0028 a0002c0002t0001g0029 a0002c0002t0001g0033 a0002c0002t0001g0034 a0002c0002t0001g0035 a0002c0002t0001g0036 a0002c0002t0001g0038 a0002c0002t0001g0039 a0002c0002t0001g0040 a0002c0002t0001g0044 a0002c0002t0001g0045 a0002c0002t0001g0049 a0002c0002t0001g0050 a0002c0002t0001g0054 a0002c0002t0001g0058 a0002c0002t0001g0059 a0002c0002t0001g0060 a0002c0002t0001g0061 a0002c0002t0001g0062 a0002c0002t0001g0063 a0002c0002t0001g0117 a0002c0002t0001g0140 a0002c0002t0001g0141 a0002c0002t0001g0209 a0002c0002t0002g0007 a0002c0002t0002g0012 a0002c0002t0002g0032 a0002c0002t0002g0037 a0002c0002t0002g0047 a0002c0002t0002g0048 a0002c0002t0002g0051 a0002c0002t0002g0052 a0002c0002t0002g0053 a0002c0002t0002g0057 a0002c0002t0002g0064 a0002c0002t0002g0065 a0002c0002t0002g0206 a0002c0002t0002g0208 a0002c0002t0002g0210 a0002c0002t0003g0019 a0002c0002t0003g0021 a0002c0002t0003g0027 a0002c0002t0003g0177 a0002c0002t0006g0056 a0002c0002t0006g0207 a0002c0002t0013g0008 a0002c0002t0016g0046 a0002c0004t0001g0009 a0002c0004t0001g0023 a0002c0004t0001g0031 a0002c0004t0001g0055 a0002c0004t0003g0030 a0005c0009t0010g0086	75	218	0.3440	-2	c.412 others(21): Show c.4121-2831_4121-2830delGT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	12/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77661467	GAA GAA	G G	intron_variant intron_variant	MODIFIER	HG01106.hp1 HG01106.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0140 a0002c0002t0001g0140	1	218	0.0046	-2	c.412 others(21): Show c.4120+1913_4120+1914delTT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	12/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77667295	ATG ATG	A A	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG01261.hp1 HG02257.hp2 others(2): Show HG01167.hp1 HG01261.hp1 HG02257.hp2 HG02258.hp1 HG02451.hp2	a0001 a0002 a0001 a0002	a0001c0001 a0002c0002 a0001c0001 a0002c0002	a0001c0001t0003 a0002c0002t0001 a0001c0001t0003 a0002c0002t0001	a0001c0001t0003g0115 a0001c0001t0003g0137 a0001c0001t0003g0196 others(2): Show a0001c0001t0003g0115 a0001c0001t0003g0137 a0001c0001t0003g0196 a0001c0001t0003g0202 a0002c0002t0001g0016	5	218	0.0229	-2	c.381 others(21): Show c.3810-2519_3810-2518delCA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	10/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77671167	AAT AAT	A A	intron_variant intron_variant	MODIFIER	HG00323.hp2 NA18943.hp1 HG00323.hp2 NA18943.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0001 a0001c0001t0002	a0001c0001t0001g0149 a0001c0001t0002g0105 a0001c0001t0001g0149 a0001c0001t0002g0105	2	218	0.0092	-2	c.380 others(21): Show c.3809+5057_3809+5058delAT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	10/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77673437	TCA TCA	T T	intron_variant intron_variant	MODIFIER	HG02083.hp1 HG02083.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0062 a0002c0002t0001g0062	1	218	0.0046	-2	c.380 others(21): Show c.3809+2787_3809+2788delTG	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	10/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77675784	ATC ATC	A A	intron_variant intron_variant	MODIFIER	HG01070.hp2 HG01070.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0013 a0002c0002t0013	a0002c0002t0013g0008 a0002c0002t0013g0008	1	218	0.0046	-2	c.380 others(19): Show c.3809+440_3809+441delGA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	10/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77681457	AAC AAC	A A	intron_variant intron_variant	MODIFIER	HG00642.hp1 HG02738.hp1 HG00642.hp1 HG02738.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0012 a0002c0002t0002g0210 a0002c0002t0002g0012 a0002c0002t0002g0210	2	218	0.0092	-2	c.373 others(17): Show c.3736+61_3736+62delGT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	9/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77687152	CAA CAA	C C	intron_variant intron_variant	MODIFIER	HG01167.hp1 HG02055.hp1 HG02280.hp2 others(10): Show HG01167.hp1 HG02055.hp1 HG02280.hp2 HG02451.hp1 HG02559.hp2 HG02572.hp1 HG02647.hp1 HG02723.hp1 HG02809.hp2 HG03225.hp1 HG03540.hp1 HG03540.hp2 NA19030.hp2	a0001 a0006 a0001 a0006	a0001c0001 a0001c0005 a0001c0007 others(1): Show a0001c0001 a0001c0005 a0001c0007 a0006c0008	a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 others(6): Show a0001c0001t0001 a0001c0001t0003 a0001c0001t0005 a0001c0001t0007 a0001c0001t0008 a0001c0001t0020 a0001c0005t0005 a0001c0007t0005 a0006c0008t0003	a0001c0001t0001g0195 a0001c0001t0003g0137 a0001c0001t0005g0069 others(10): Show a0001c0001t0001g0195 a0001c0001t0003g0137 a0001c0001t0005g0069 a0001c0001t0005g0073 a0001c0001t0005g0074 a0001c0001t0005g0075 a0001c0001t0005g0213 a0001c0001t0007g0066 a0001c0001t0008g0006 a0001c0001t0020g0180 a0001c0005t0005g0082 a0001c0007t0005g0079 a0006c0008t0003g0203	13	218	0.0596	-2	c.594 others(19): Show c.594+1664_594+1665delTT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	7/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77688394	GGA GGA	G G	intron_variant intron_variant	MODIFIER	NA18948.hp1 NA18948.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0004 a0001c0001t0004	a0001c0001t0004g0191 a0001c0001t0004g0191	1	218	0.0046	-2	c.594 others(17): Show c.594+422_594+423delTC	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	7/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77692846	AGT AGT	A A	intron_variant intron_variant	MODIFIER	HG00558.hp1 HG01167.hp1 HG01243.hp1 others(24): Show HG00558.hp1 HG01167.hp1 HG01243.hp1 HG01358.hp1 HG01975.hp2 HG02015.hp1 HG02165.hp1 HG02273.hp2 HG02451.hp2 HG02717.hp1 HG03540.hp2 HG04204.hp1 NA18948.hp1 NA18959.hp1 NA18962.hp1 NA18965.hp1 NA18969.hp1 NA18970.hp1 NA18984.hp1 NA19001.hp1 NA19058.hp1 NA19060.hp1 NA19074.hp1 NA19080.hp1 NA19084.hp2 NA19091.hp1 NA20129.hp1	a0001 a0002 a0001 a0002	a0001c0001 a0001c0010 a0002c0002 a0001c0001 a0001c0010 a0002c0002	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(8): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0008 a0001c0001t0017 a0001c0001t0018 a0001c0010t0006 a0002c0002t0001 a0002c0002t0002 a0002c0002t0006	a0001c0001t0001g0195 a0001c0001t0002g0189 a0001c0001t0003g0115 others(24): Show a0001c0001t0001g0195 a0001c0001t0002g0189 a0001c0001t0003g0115 a0001c0001t0003g0137 a0001c0001t0003g0138 a0001c0001t0004g0186 a0001c0001t0004g0187 a0001c0001t0004g0188 a0001c0001t0004g0190 a0001c0001t0004g0191 a0001c0001t0004g0192 a0001c0001t0004g0194 a0001c0001t0004g0205 a0001c0001t0004g0218 a0001c0001t0008g0077 a0001c0001t0017g0183 a0001c0001t0018g0193 a0001c0010t0006g0197 a0002c0002t0001g0013 a0002c0002t0001g0035 a0002c0002t0001g0054 a0002c0002t0001g0109 a0002c0002t0002g0007 a0002c0002t0002g0057 a0002c0002t0002g0064 a0002c0002t0002g0110 a0002c0002t0006g0056	27	218	0.1239	-2	c.484 others(17): Show c.484+976_484+977delAC	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	6/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77695061	CAA CAA	C C	intron_variant intron_variant	MODIFIER	HG02027.hp1 HG02027.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0052 a0002c0002t0002g0052	1	218	0.0046	-2	c.371 others(19): Show c.371-1126_371-1125delTT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	5/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77707964	TTA TTA	T T	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0010 a0001c0001t0010	a0001c0001t0010g0083 a0001c0001t0010g0083	1	218	0.0046	-2	c.133 others(19): Show c.133+9165_133+9166delTA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	2/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77714914	TTA TTA	T T	intron_variant intron_variant	MODIFIER	HG01943.hp1 HG01943.hp1	a0001 a0001	a0001c0014 a0001c0014	a0001c0014t0012 a0001c0014t0012	a0001c0014t0012g0003 a0001c0014t0012g0003	1	218	0.0046	-2	c.133 others(19): Show c.133+2215_133+2216delTA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	2/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77716110	ATT ATT	A A	intron_variant intron_variant	MODIFIER	HG02451.hp2 HG02723.hp2 HG02809.hp1 others(5): Show HG02451.hp2 HG02723.hp2 HG02809.hp1 HG04184.hp2 NA18906.hp2 NA18965.hp1 NA19043.hp1 NA19074.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(2): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0001c0001t0004 a0001c0001t0017	a0001c0001t0001g0087 a0001c0001t0001g0198 a0001c0001t0002g0158 others(5): Show a0001c0001t0001g0087 a0001c0001t0001g0198 a0001c0001t0002g0158 a0001c0001t0002g0178 a0001c0001t0003g0115 a0001c0001t0003g0163 a0001c0001t0004g0205 a0001c0001t0017g0183	8	218	0.0367	-2	c.133 others(19): Show c.133+1019_133+1020delAA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	2/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77716301	TAA TAA	T T	intron_variant intron_variant	MODIFIER	NA19080.hp1 NA19080.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0189 a0001c0001t0002g0189	1	218	0.0046	-2	c.133 others(17): Show c.133+828_133+829delTT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	2/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77716578	ACT ACT	A A	intron_variant intron_variant	MODIFIER	NA19001.hp2 NA19001.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0184 a0001c0001t0002g0184	1	218	0.0046	-2	c.133 others(17): Show c.133+551_133+552delAG	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	2/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77720341	CAA CAA	C C	intron_variant intron_variant	MODIFIER	HG03139.hp1 HG03139.hp1	a0001 a0001	a0001c0003 a0001c0003	a0001c0003t0001 a0001c0003t0001	a0001c0003t0001g0155 a0001c0003t0001g0155	1	218	0.0046	-2	c.21- others(17): Show c.21-3100_21-3099delTT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	1/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77728031	ATG ATG	A A	intron_variant intron_variant	MODIFIER	HG02258.hp1 HG02280.hp2 HG02922.hp1 others(3): Show HG02258.hp1 HG02280.hp2 HG02922.hp1 HG03195.hp2 HG03486.hp1 NA19043.hp1	a0001 a0006 a0001 a0006	a0001c0001 a0006c0008 a0001c0001 a0006c0008	a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 others(1): Show a0001c0001t0001 a0001c0001t0002 a0001c0001t0003 a0006c0008t0003	a0001c0001t0001g0198 a0001c0001t0002g0199 a0001c0001t0003g0200 others(3): Show a0001c0001t0001g0198 a0001c0001t0002g0199 a0001c0001t0003g0200 a0001c0001t0003g0201 a0001c0001t0003g0202 a0006c0008t0003g0203	6	218	0.0275	-2	c.21- others(19): Show c.21-10790_21-10789delCA	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	1/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77733706	TAA TAA	T T	intron_variant intron_variant	MODIFIER	HG02683.hp2 HG03492.hp1 NA18959.hp1 others(2): Show HG02683.hp2 HG03492.hp1 NA18959.hp1 NA18986.hp1 NA19003.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0013 a0002c0002t0001g0024 a0002c0002t0001g0036 others(2): Show a0002c0002t0001g0013 a0002c0002t0001g0024 a0002c0002t0001g0036 a0002c0002t0001g0038 a0002c0002t0001g0049	5	218	0.0229	-2	c.21- others(19): Show c.21-16465_21-16464delTT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	1/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77737435	AGG AGG	A A	intron_variant intron_variant	MODIFIER	HG02698.hp1 HG02698.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0096 a0001c0001t0001g0096	1	218	0.0046	-2	c.21- others(19): Show c.21-20194_21-20193delCC	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	1/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77740053	CAA CAA	C C	intron_variant intron_variant	MODIFIER	HG02647.hp1 HG02723.hp1 NA18962.hp1 others(3): Show HG02647.hp1 HG02723.hp1 NA18962.hp1 NA18965.hp1 NA19030.hp2 NA19240.hp1	a0001 a0001	a0001c0001 a0001c0003 a0001c0001 a0001c0003	a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 others(1): Show a0001c0001t0004 a0001c0001t0005 a0001c0001t0007 a0001c0003t0001	a0001c0001t0004g0190 a0001c0001t0004g0205 a0001c0001t0005g0073 others(3): Show a0001c0001t0004g0190 a0001c0001t0004g0205 a0001c0001t0005g0073 a0001c0001t0005g0074 a0001c0001t0007g0066 a0001c0003t0001g0080	6	218	0.0275	-2	c.21- others(19): Show c.21-22812_21-22811delTT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	1/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77741037	TAC TAC	T T	intron_variant intron_variant	MODIFIER	HG04199.hp1 HG04199.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0204 a0002c0002t0001g0204	1	218	0.0046	-2	c.21- others(19): Show c.21-23796_21-23795delGT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	1/34			chrX	TogoVar
ATRX_chrX_77499880_77791216	77746325	CAT CAT	C C	intron_variant intron_variant	MODIFIER	HG02738.hp1 HG02738.hp1	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0210 a0002c0002t0002g0210	1	218	0.0046	-2	c.21- others(19): Show c.21-29084_21-29083delAT	ATRX	ENSG00000085224.23	transcript	ENST00000373344.11	protein_coding	1/34			chrX	TogoVar

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