regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TGFBR3_chr1_91675343_91891151 | 91875782 | GGC | G | intron_variant | MODIFIER | HG00280.hp1 HG00438.hp2 HG01069.hp2 others(44): Show |
a0001a0002a0004others(2): Show | a0001c0001a0001c0002a0001c0003others(13): Show | a0001c0001t0005a0001c0001t0010a0001c0001t0050others(28): Show | a0001c0001t0005g0255a0001c0001t0005g0276a0001c0001t0010g0263others(44): Show | 47 | 284 | 0.1655 | -2 | c.-11 others(23): Show |
TGFBR3 | ENSG00000069702.11 | transcript | ENST00000212355.9 | protein_coding | 1/16 | chr1 | TogoVar | ||||||
TGFBR3_chr1_91675343_91891151 | 91879920 | CTG | C | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp2 HG00639.hp2 others(53): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0002a0001c0003others(14): Show | a0001c0001t0001a0001c0001t0005a0001c0002t0001others(34): Show | a0001c0001t0001g0132a0001c0001t0005g0165a0001c0002t0001g0005others(53): Show | 56 | 284 | 0.1972 | -2 | c.-11 others(21): Show |
TGFBR3 | ENSG00000069702.11 | transcript | ENST00000212355.9 | protein_coding | 1/16 | chr1 | TogoVar | ||||||
TGFBRAP1_chr2_105259414_105334735 | 105261233 | CAT | C | downstream_gene_variant | MODIFIER | NA18961.hp2 NA18977.hp1 NA19000.hp2 others(2): Show |
a0001 | a0001c0008 | a0001c0008t0001 | a0001c0008t0001g0016a0001c0008t0001g0019a0001c0008t0001g0020others(2): Show | 5 | 380 | 0.0132 | -2 | c.*61 others(13): Show |
TGFBRAP1 | ENSG00000135966.14 | transcript | ENST00000393359.7 | protein_coding | 3180 | chr2 | TogoVar | ||||||
TGFBRAP1_chr2_105259414_105334735 | 105278068 | ATG | A | intron_variant | MODIFIER | HG00621.hp1 HG01167.hp2 HG01169.hp2 others(44): Show |
a0001a0002a0004 | a0001c0001a0001c0003a0002c0009others(1): Show | a0001c0001t0001a0001c0001t0012a0001c0001t0029others(8): Show | a0001c0001t0001g0024a0001c0001t0001g0025a0001c0001t0001g0026others(43): Show | 47 | 380 | 0.1237 | -2 | c.146 others(19): Show |
TGFBRAP1 | ENSG00000135966.14 | transcript | ENST00000393359.7 | protein_coding | 6/11 | chr2 | TogoVar | ||||||
TGFBRAP1_chr2_105259414_105334735 | 105290587 | AAG | A | intron_variant | MODIFIER | NA18950.hp1 NA18960.hp2 NA19060.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0009a0001c0001t0001g0226a0001c0001t0001g0227 | 4 | 380 | 0.0105 | -2 | c.103 others(21): Show |
TGFBRAP1 | ENSG00000135966.14 | transcript | ENST00000393359.7 | protein_coding | 4/11 | chr2 | TogoVar | ||||||
TGFBRAP1_chr2_105259414_105334735 | 105290613 | GAC | G | intron_variant | MODIFIER | NA18950.hp1 NA18960.hp2 NA19060.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0009a0001c0001t0001g0226a0001c0001t0001g0227 | 4 | 380 | 0.0105 | -2 | c.103 others(21): Show |
TGFBRAP1 | ENSG00000135966.14 | transcript | ENST00000393359.7 | protein_coding | 4/11 | chr2 | TogoVar | ||||||
TGFBRAP1_chr2_105259414_105334735 | 105290616 | AGT | A | intron_variant | MODIFIER | HG01167.hp2 HG02015.hp2 HG02055.hp2 others(8): Show |
a0001a0002a0003 | a0001c0003a0001c0006a0001c0011others(4): Show | a0001c0003t0007a0001c0003t0008a0001c0003t0041others(7): Show | a0001c0003t0007g0013a0001c0003t0008g0326a0001c0003t0041g0286others(7): Show | 11 | 380 | 0.0290 | -2 | c.103 others(21): Show |
TGFBRAP1 | ENSG00000135966.14 | transcript | ENST00000393359.7 | protein_coding | 4/11 | chr2 | TogoVar | ||||||
TGFBRAP1_chr2_105259414_105334735 | 105295809 | CAA | C | intron_variant | MODIFIER | HG00639.hp1 HG00735.hp2 HG00741.hp1 others(19): Show |
a0002 | a0002c0004a0002c0007a0002c0009 | a0002c0004t0006a0002c0004t0028a0002c0004t0031others(2): Show | a0002c0004t0006g0007a0002c0004t0006g0008a0002c0004t0006g0205others(17): Show | 22 | 380 | 0.0579 | -2 | c.103 others(19): Show |
TGFBRAP1 | ENSG00000135966.14 | transcript | ENST00000393359.7 | protein_coding | 4/11 | chr2 | TogoVar | ||||||
TGFBRAP1_chr2_105259414_105334735 | 105300454 | TCC | T | intron_variant | MODIFIER | HG02083.hp2 HG02148.hp2 HG02523.hp1 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0005a0001c0001t0012 | a0001c0001t0001g0068a0001c0001t0001g0069a0001c0001t0001g0073others(9): Show | 12 | 380 | 0.0316 | -2 | c.689 others(19): Show |
TGFBRAP1 | ENSG00000135966.14 | transcript | ENST00000393359.7 | protein_coding | 2/11 | chr2 | TogoVar | ||||||
TGFBRAP1_chr2_105259414_105334735 | 105302009 | TAA | T | intron_variant | MODIFIER | HG02451.hp2 HG02647.hp1 HG02895.hp2 others(5): Show |
a0001a0002 | a0001c0001a0001c0010a0002c0009 | a0001c0001t0001a0001c0010t0001a0002c0009t0005 | a0001c0001t0001g0073a0001c0001t0001g0085a0001c0001t0001g0103others(5): Show | 8 | 380 | 0.0211 | -2 | c.689 others(19): Show |
TGFBRAP1 | ENSG00000135966.14 | transcript | ENST00000393359.7 | protein_coding | 2/11 | chr2 | TogoVar | ||||||
TGFBRAP1_chr2_105259414_105334735 | 105307188 | ACT | A | intron_variant | MODIFIER | HG00280.hp2 HG00639.hp2 HG00642.hp1 others(26): Show |
a0002 | a0002c0005a0002c0012a0002c0020others(1): Show | a0002c0005t0003a0002c0005t0010a0002c0005t0036others(4): Show | a0002c0005t0003g0258a0002c0005t0003g0259a0002c0005t0003g0260others(25): Show | 29 | 380 | 0.0763 | -2 | c.688 others(17): Show |
TGFBRAP1 | ENSG00000135966.14 | transcript | ENST00000393359.7 | protein_coding | 2/11 | chr2 | TogoVar | ||||||
TGFBRAP1_chr2_105259414_105334735 | 105315018 | ACT | A | intron_variant | MODIFIER | HG01070.hp2 HG01099.hp2 HG01109.hp2 others(12): Show |
a0001a0002a0004 | a0001c0006a0002c0004a0002c0023others(1): Show | a0001c0006t0004a0002c0004t0003a0002c0004t0016others(2): Show | a0001c0006t0004g0357a0002c0004t0003g0014a0002c0004t0003g0015others(10): Show | 15 | 380 | 0.0395 | -2 | c.-17 others(19): Show |
TGFBRAP1 | ENSG00000135966.14 | transcript | ENST00000393359.7 | protein_coding | 1/11 | chr2 | TogoVar | ||||||
TGFBRAP1_chr2_105259414_105334735 | 105316420 | AGT | A | intron_variant | MODIFIER | HG00741.hp2 HG01167.hp2 HG03017.hp1 others(4): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0023a0001c0003t0004others(2): Show | a0001c0001t0001g0115a0001c0001t0023g0059a0001c0003t0004g0338others(3): Show | 7 | 380 | 0.0184 | -2 | c.-17 others(19): Show |
TGFBRAP1 | ENSG00000135966.14 | transcript | ENST00000393359.7 | protein_coding | 1/11 | chr2 | TogoVar | ||||||
TGFBRAP1_chr2_105259414_105334735 | 105316479 | GCA | G | intron_variant | MODIFIER | HG01070.hp1 HG02040.hp2 HG02165.hp2 others(20): Show |
a0001a0002 | a0001c0001a0001c0006a0001c0008others(1): Show | a0001c0001t0001a0001c0001t0012a0001c0001t0015others(4): Show | a0001c0001t0001g0044a0001c0001t0001g0066a0001c0001t0001g0067others(20): Show | 23 | 380 | 0.0605 | -2 | c.-17 others(19): Show |
TGFBRAP1 | ENSG00000135966.14 | transcript | ENST00000393359.7 | protein_coding | 1/11 | chr2 | TogoVar | ||||||
TGFBRAP1_chr2_105259414_105334735 | 105325612 | CTT | C | intron_variant | MODIFIER | HG00639.hp1 HG00735.hp2 HG00741.hp1 others(17): Show |
a0002 | a0002c0004 | a0002c0004t0006a0002c0004t0028a0002c0004t0031 | a0002c0004t0006g0007a0002c0004t0006g0008a0002c0004t0006g0205others(15): Show | 20 | 380 | 0.0526 | -2 | c.-18 others(19): Show |
TGFBRAP1 | ENSG00000135966.14 | transcript | ENST00000393359.7 | protein_coding | 1/11 | chr2 | TogoVar | ||||||
TGFBRAP1_chr2_105259414_105334735 | 105330737 | CAA | C | upstream_gene_variant | MODIFIER | HG01261.hp2 HG02004.hp2 HG02109.hp2 others(22): Show |
a0001a0002 | a0001c0003a0001c0006a0001c0016others(2): Show | a0001c0003t0034a0001c0003t0041a0001c0006t0001others(7): Show | a0001c0003t0034g0124a0001c0003t0041g0286a0001c0006t0001g0201others(21): Show | 25 | 380 | 0.0658 | -2 | c.-11 others(13): Show |
TGFBRAP1 | ENSG00000135966.14 | transcript | ENST00000393359.7 | protein_coding | 1003 | chr2 | TogoVar | ||||||
TGFBRAP1_chr2_105259414_105334735 | 105332114 | CTT | C | upstream_gene_variant | MODIFIER | HG00140.hp1 HG00280.hp1 HG00423.hp2 others(93): Show |
a0001a0002 | a0001c0001a0001c0006a0001c0008others(6): Show | a0001c0001t0001a0001c0006t0001a0001c0006t0035others(16): Show | a0001c0001t0001g0045a0001c0001t0001g0079a0001c0001t0001g0087others(87): Show | 96 | 380 | 0.2526 | -2 | c.-25 others(13): Show |
TGFBRAP1 | ENSG00000135966.14 | transcript | ENST00000393359.7 | protein_coding | 2380 | chr2 | TogoVar | ||||||
TGIF1_chr18_3445172_3464978 | 3445765 | CAA | C | upstream_gene_variant | MODIFIER | HG02622.hp2 HG03225.hp1 NA18961.hp1 others(3): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0001a0001c0001t0004a0001c0001t0012others(2): Show | a0001c0001t0001g0001a0001c0001t0004g0082a0001c0001t0012g0012others(2): Show | 6 | 448 | 0.0134 | -2 | c.-47 others(13): Show |
TGIF1 | ENSG00000177426.22 | transcript | ENST00000343820.10 | protein_coding | 4406 | chr18 | TogoVar | ||||||
TGIF1_chr18_3445172_3464978 | 3448717 | CTT | C | upstream_gene_variant | MODIFIER | HG00408.hp1 HG00558.hp1 HG00639.hp1 others(68): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0004others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(15): Show | a0001c0001t0001g0001a0001c0001t0001g0017a0001c0001t0002g0001others(33): Show | 71 | 448 | 0.1585 | -2 | c.-17 others(13): Show |
TGIF1 | ENSG00000177426.22 | transcript | ENST00000343820.10 | protein_coding | 1454 | chr18 | TogoVar | ||||||
TGIF1_chr18_3445172_3464978 | 3454407 | TGA | T | intron_variant | MODIFIER | HG02135.hp2 HG02630.hp2 HG02723.hp1 others(4): Show |
a0001 | a0001c0004 | a0001c0004t0013a0001c0004t0020a0001c0004t0038others(2): Show | a0001c0004t0013g0043a0001c0004t0020g0040a0001c0004t0038g0080others(2): Show | 7 | 448 | 0.0156 | -2 | c.17- others(17): Show |
TGIF1 | ENSG00000177426.22 | transcript | ENST00000343820.10 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |||||
TGIF1_chr18_3445172_3464978 | 3456681 | GAC | G | intron_variant | MODIFIER | HG00735.hp2 HG01071.hp1 HG01168.hp1 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0010a0001c0001t0001g0091 | 8 | 448 | 0.0179 | -2 | c.243 others(17): Show |
TGIF1 | ENSG00000177426.22 | transcript | ENST00000343820.10 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr18 | TogoVar | |||||
TGIF1_chr18_3445172_3464978 | 3460312 | CTT | C | downstream_gene_variant | MODIFIER | HG01099.hp2 HG01109.hp1 HG01256.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0008 | a0001c0001t0008g0005 | 6 | 448 | 0.0134 | -2 | c.*23 others(13): Show |
TGIF1 | ENSG00000177426.22 | transcript | ENST00000343820.10 | protein_coding | 335 | chr18 | TogoVar | ||||||
TGIF1_chr18_3445172_3464978 | 3461418 | CTT | C | downstream_gene_variant | MODIFIER | HG00558.hp2 HG00609.hp2 HG02027.hp1 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001a0001c0001t0001g0008 | 8 | 448 | 0.0179 | -2 | c.*34 others(13): Show |
TGIF1 | ENSG00000177426.22 | transcript | ENST00000343820.10 | protein_coding | 1441 | chr18 | TogoVar | ||||||
TGIF2LX_chrX_89916908_89927883 | 89921423 | CAA | C | upstream_gene_variant | MODIFIER | HG00280.hp1 HG00323.hp2 HG00423.hp2 others(114): Show |
a0001 | a0001c0001a0001c0005 | a0001c0001t0001a0001c0005t0001 | a0001c0001t0001g0002a0001c0005t0001g0002 | 117 | 323 | 0.3622 | -2 | c.-56 others(11): Show |
TGIF2LX | ENSG00000153779.11 | transcript | ENST00000283891.6 | protein_coding | 484 | chrX | TogoVar | ||||||
TGIF2LX_chrX_89916908_89927883 | 89923992 | AGT | A | downstream_gene_variant | MODIFIER | HG02630.hp1 HG02723.hp1 HG02970.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | 6 | 323 | 0.0186 | -2 | c.*11 others(13): Show |
TGIF2LX | ENSG00000153779.11 | transcript | ENST00000283891.6 | protein_coding | 1110 | chrX | TogoVar | ||||||
TGIF2LX_chrX_89916908_89927883 | 89925608 | TTC | T | downstream_gene_variant | MODIFIER | HG01257.hp2 HG01258.hp1 HG01261.hp1 others(8): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 11 | 323 | 0.0341 | -2 | c.*27 others(13): Show |
TGIF2LX | ENSG00000153779.11 | transcript | ENST00000283891.6 | protein_coding | 2726 | chrX | TogoVar | ||||||
TGIF2LX_chrX_89916908_89927883 | 89925873 | CAT | C | downstream_gene_variant | MODIFIER | HG00408.hp1 HG00408.hp2 HG00609.hp1 others(43): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0003 | 46 | 323 | 0.1424 | -2 | c.*30 others(13): Show |
TGIF2LX | ENSG00000153779.11 | transcript | ENST00000283891.6 | protein_coding | 2991 | chrX | TogoVar | ||||||
TGIF2_chr20_36568597_36598950 | 36577231 | ACT | A | intron_variant | MODIFIER | HG01109.hp2 HG02895.hp2 HG03195.hp2 |
a0001 | a0001c0001 | a0001c0001t0011 | a0001c0001t0011g0040a0001c0001t0011g0041a0001c0001t0011g0042 | 3 | 362 | 0.0083 | -2 | c.-34 others(19): Show |
TGIF2 | ENSG00000118707.11 | transcript | ENST00000373872.9 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
TGIF2_chr20_36568597_36598950 | 36588355 | CTT | C | intron_variant | MODIFIER | HG00323.hp1 HG01074.hp2 HG01433.hp2 others(22): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(3): Show | a0001c0001t0001g0048a0001c0001t0001g0076a0001c0001t0001g0080others(21): Show | 25 | 362 | 0.0691 | -2 | c.193 others(19): Show |
TGIF2 | ENSG00000118707.11 | transcript | ENST00000373872.9 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
TGIF2_chr20_36568597_36598950 | 36593308 | CAT | C | 3_prime_UTR_variant | MODIFIER | HG00544.hp1 NA18943.hp1 NA18952.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0010 | a0001c0001t0010g0035a0001c0001t0010g0119a0001c0001t0010g0120 | 4 | 362 | 0.0111 | -2 | c.*18 others(13): Show |
TGIF2 | ENSG00000118707.11 | transcript | ENST00000373872.9 | protein_coding | 3/3 | 1878 | chr20 | TogoVar | |||||
TGIF2_chr20_36568597_36598950 | 36596784 | CTT | C | downstream_gene_variant | MODIFIER | HG01109.hp2 HG02109.hp2 HG02451.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0004a0001c0001t0011a0001c0001t0017others(1): Show | a0001c0001t0004g0062a0001c0001t0004g0063a0001c0001t0004g0128others(6): Show | 9 | 362 | 0.0249 | -2 | c.*53 others(13): Show |
TGIF2 | ENSG00000118707.11 | transcript | ENST00000373872.9 | protein_coding | 2835 | chr20 | TogoVar | ||||||
TGM1_chr14_24244114_24268177 | 24247130 | TTC | T | downstream_gene_variant | MODIFIER | HG00544.hp1 HG00597.hp1 HG02015.hp1 others(26): Show |
a0001 | a0001c0001a0001c0002a0001c0013others(3): Show | a0001c0001t0002a0001c0002t0001a0001c0002t0002others(4): Show | a0001c0001t0002g0038a0001c0001t0002g0109a0001c0002t0001g0045others(14): Show | 29 | 420 | 0.0691 | -2 | c.*21 others(13): Show |
TGM1 | ENSG00000092295.12 | transcript | ENST00000206765.11 | protein_coding | 1983 | chr14 | TogoVar | ||||||
TGM2_chr20_38122385_38170270 | 38122436 | TAC | T | downstream_gene_variant | MODIFIER | HG00609.hp1 HG00621.hp1 HG01070.hp2 others(14): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0008others(1): Show | a0001c0001t0001a0001c0002t0002a0001c0002t0006others(3): Show | a0001c0001t0001g0291a0001c0002t0002g0037a0001c0002t0002g0147others(14): Show | 17 | 360 | 0.0472 | -2 | c.*77 others(13): Show |
TGM2 | ENSG00000198959.12 | transcript | ENST00000361475.7 | protein_coding | 4948 | chr20 | TogoVar | ||||||
TGM2_chr20_38122385_38170270 | 38123637 | CCT | C | downstream_gene_variant | MODIFIER | HG00140.hp2 HG00621.hp1 HG00642.hp1 others(30): Show |
a0001a0002a0006others(2): Show | a0001c0001a0001c0002a0001c0003others(6): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0011others(8): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0019others(26): Show | 33 | 360 | 0.0917 | -2 | c.*65 others(13): Show |
TGM2 | ENSG00000198959.12 | transcript | ENST00000361475.7 | protein_coding | 3747 | chr20 | TogoVar | ||||||
TGM2_chr20_38122385_38170270 | 38123650 | CTA | C | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(205): Show |
a0001a0002a0004others(3): Show | a0001c0001a0001c0002a0001c0003others(10): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(20): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0003others(171): Show | 208 | 360 | 0.5778 | -2 | c.*65 others(13): Show |
TGM2 | ENSG00000198959.12 | transcript | ENST00000361475.7 | protein_coding | 3734 | chr20 | TogoVar | ||||||
TGM2_chr20_38122385_38170270 | 38123904 | TTA | T | downstream_gene_variant | MODIFIER | HG00558.hp1 HG00609.hp2 HG00741.hp2 others(20): Show |
a0001a0004a0005 | a0001c0001a0001c0003a0004c0012others(1): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(4): Show | a0001c0001t0001g0008a0001c0001t0001g0014a0001c0001t0001g0017others(19): Show | 23 | 360 | 0.0639 | -2 | c.*63 others(13): Show |
TGM2 | ENSG00000198959.12 | transcript | ENST00000361475.7 | protein_coding | 3480 | chr20 | TogoVar | ||||||
TGM2_chr20_38122385_38170270 | 38123924 | TTA | T | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(234): Show |
a0001a0002a0004others(7): Show | a0001c0001a0001c0002a0001c0003others(15): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(24): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0003others(197): Show | 237 | 360 | 0.6583 | -2 | c.*62 others(13): Show |
TGM2 | ENSG00000198959.12 | transcript | ENST00000361475.7 | protein_coding | 3460 | chr20 | TogoVar | ||||||
TGM2_chr20_38122385_38170270 | 38123946 | TTA | T | downstream_gene_variant | MODIFIER | HG00140.hp2 HG00642.hp2 HG00738.hp2 others(34): Show |
a0001 | a0001c0001a0001c0002a0001c0004others(3): Show | a0001c0001t0001a0001c0001t0004a0001c0002t0002others(6): Show | a0001c0001t0001g0012a0001c0001t0001g0149a0001c0001t0001g0150others(29): Show | 37 | 360 | 0.1028 | -2 | c.*62 others(13): Show |
TGM2 | ENSG00000198959.12 | transcript | ENST00000361475.7 | protein_coding | 3438 | chr20 | TogoVar | ||||||
TGM2_chr20_38122385_38170270 | 38123966 | TTA | T | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(241): Show |
a0001a0002a0004others(7): Show | a0001c0001a0001c0002a0001c0003others(16): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(26): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0003others(203): Show | 244 | 360 | 0.6778 | -2 | c.*62 others(13): Show |
TGM2 | ENSG00000198959.12 | transcript | ENST00000361475.7 | protein_coding | 3418 | chr20 | TogoVar | ||||||
TGM2_chr20_38122385_38170270 | 38123986 | TTA | T | downstream_gene_variant | MODIFIER | HG00558.hp1 HG01891.hp2 HG02809.hp2 others(1): Show |
a0001 | a0001c0001a0001c0006 | a0001c0001t0001a0001c0001t0005a0001c0006t0007 | a0001c0001t0001g0008a0001c0001t0001g0116a0001c0001t0005g0131others(1): Show | 4 | 360 | 0.0111 | -2 | c.*62 others(13): Show |
TGM2 | ENSG00000198959.12 | transcript | ENST00000361475.7 | protein_coding | 3398 | chr20 | TogoVar | ||||||
TGM2_chr20_38122385_38170270 | 38124098 | TTA | T | downstream_gene_variant | MODIFIER | HG00741.hp2 HG01884.hp1 HG02615.hp2 others(7): Show |
a0001a0005 | a0001c0001a0005c0013 | a0001c0001t0005a0005c0013t0005 | a0001c0001t0005g0036a0001c0001t0005g0117a0001c0001t0005g0118others(6): Show | 10 | 360 | 0.0278 | -2 | c.*61 others(13): Show |
TGM2 | ENSG00000198959.12 | transcript | ENST00000361475.7 | protein_coding | 3286 | chr20 | TogoVar | ||||||
TGM2_chr20_38122385_38170270 | 38135404 | TAC | T | intron_variant | MODIFIER | HG00741.hp2 HG01361.hp2 HG01884.hp1 others(11): Show |
a0001a0005 | a0001c0001a0001c0025a0005c0013 | a0001c0001t0005a0001c0025t0004a0005c0013t0005 | a0001c0001t0005g0036a0001c0001t0005g0117a0001c0001t0005g0118others(10): Show | 14 | 360 | 0.0389 | -2 | c.161 others(21): Show |
TGM2 | ENSG00000198959.12 | transcript | ENST00000361475.7 | protein_coding | 10/12 | chr20 | TogoVar | ||||||
TGM2_chr20_38122385_38170270 | 38145762 | CTT | C | intron_variant | MODIFIER | HG00642.hp2 HG01261.hp1 HG02055.hp1 others(23): Show |
a0001a0003 | a0001c0001a0001c0002a0001c0004others(3): Show | a0001c0001t0011a0001c0002t0001a0001c0002t0002others(7): Show | a0001c0001t0011g0125a0001c0002t0001g0265a0001c0002t0002g0147others(20): Show | 26 | 360 | 0.0722 | -2 | c.859 others(17): Show |
TGM2 | ENSG00000198959.12 | transcript | ENST00000361475.7 | protein_coding | 6/12 | chr20 | TogoVar | ||||||
TGM2_chr20_38122385_38170270 | 38165671 | AAC | A | upstream_gene_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00597.hp1 others(95): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(14): Show | a0001c0001t0001g0008a0001c0001t0001g0011a0001c0001t0001g0023others(84): Show | 98 | 360 | 0.2722 | -2 | c.-47 others(11): Show |
TGM2 | ENSG00000198959.12 | transcript | ENST00000361475.7 | protein_coding | 402 | chr20 | TogoVar | ||||||
TGM3_chr20_2291001_2346079 | 2300242 | AAG | A | intron_variant | MODIFIER | HG00438.hp1 HG00544.hp2 HG00642.hp1 others(34): Show |
a0003a0007a0008others(1): Show | a0003c0003a0003c0010a0007c0006others(2): Show | a0003c0003t0001a0003c0010t0001a0007c0006t0002others(2): Show | a0003c0003t0001g0025a0003c0003t0001g0312a0003c0003t0001g0313others(33): Show | 37 | 360 | 0.1028 | -2 | c.7+4 others(15): Show |
TGM3 | ENSG00000125780.12 | transcript | ENST00000381458.6 | protein_coding | 1/12 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
TGM3_chr20_2291001_2346079 | 2312396 | CAA | C | intron_variant | MODIFIER | HG01109.hp1 HG01109.hp2 HG01496.hp2 others(44): Show |
a0001a0003a0004others(4): Show | a0001c0001a0003c0003a0004c0004others(6): Show | a0001c0001t0001a0003c0003t0001a0004c0004t0001others(9): Show | a0001c0001t0001g0010a0001c0001t0001g0024a0001c0001t0001g0137others(43): Show | 47 | 360 | 0.1306 | -2 | c.541 others(17): Show |
TGM3 | ENSG00000125780.12 | transcript | ENST00000381458.6 | protein_coding | 4/12 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
TGM3_chr20_2291001_2346079 | 2314530 | TAC | T | intron_variant | MODIFIER | HG01433.hp1 HG02145.hp1 HG02723.hp1 others(4): Show |
a0001a0005a0009others(1): Show | a0001c0001a0005c0005a0005c0014others(2): Show | a0001c0001t0001a0005c0005t0001a0005c0014t0001others(2): Show | a0001c0001t0001g0226a0005c0005t0001g0017a0005c0005t0001g0020others(4): Show | 7 | 360 | 0.0194 | -2 | c.669 others(19): Show |
TGM3 | ENSG00000125780.12 | transcript | ENST00000381458.6 | protein_coding | 5/12 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
TGM3_chr20_2291001_2346079 | 2317943 | CAT | C | intron_variant | MODIFIER | HG00735.hp2 HG01952.hp2 HG02109.hp1 others(8): Show |
a0001a0004a0010others(2): Show | a0001c0001a0004c0004a0010c0013others(2): Show | a0001c0001t0001a0004c0004t0001a0010c0013t0003others(2): Show | a0001c0001t0001g0010a0001c0001t0001g0024a0004c0004t0001g0019others(7): Show | 11 | 360 | 0.0306 | -2 | c.983 others(17): Show |
TGM3 | ENSG00000125780.12 | transcript | ENST00000381458.6 | protein_coding | 7/12 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
TGM3_chr20_2291001_2346079 | 2331005 | CAA | C | intron_variant | MODIFIER | HG00140.hp2 HG00280.hp1 HG00639.hp1 others(6): Show |
a0001a0002a0006 | a0001c0001a0002c0002a0006c0007 | a0001c0001t0001a0002c0002t0002a0006c0007t0002 | a0001c0001t0001g0088a0001c0001t0001g0089a0001c0001t0001g0104others(5): Show | 9 | 360 | 0.0250 | -2 | c.133 others(19): Show |
TGM3 | ENSG00000125780.12 | transcript | ENST00000381458.6 | protein_coding | 9/12 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |||||
TGM4_chr3_44869608_44919990 | 44869994 | CAG | C | upstream_gene_variant | MODIFIER | HG02486.hp2 HG02970.hp1 HG03516.hp1 |
a0004a0005 | a0004c0004a0005c0005 | a0004c0004t0001a0005c0005t0001 | a0004c0004t0001g0243a0005c0005t0001g0007a0005c0005t0001g0101 | 3 | 314 | 0.0096 | -2 | c.-46 others(13): Show |
TGM4 | ENSG00000163810.13 | transcript | ENST00000296125.9 | protein_coding | 4613 | chr3 | TogoVar |