regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TMCC2_chr1_205222946_205278343 | 205236068 | CAA | C | intron_variant | MODIFIER | HG00140.hp1 HG00280.hp2 HG00323.hp1 others(113): Show |
a0001a0002 | a0001c0001a0001c0006a0001c0007others(3): Show | a0001c0001t0001a0001c0001t0006a0001c0006t0001others(5): Show | a0001c0001t0001g0002a0001c0001t0001g0006a0001c0001t0001g0020others(104): Show | 116 | 372 | 0.3118 | -2 | c.208 others(19): Show |
TMCC2 | ENSG00000133069.17 | transcript | ENST00000358024.8 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
TMCC2_chr1_205222946_205278343 | 205261196 | CTT | C | intron_variant | MODIFIER | HG00558.hp1 HG00738.hp1 HG01069.hp2 others(28): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0006others(1): Show | a0001c0001t0001a0001c0001t0010a0001c0002t0001others(4): Show | a0001c0001t0001g0030a0001c0001t0001g0095a0001c0001t0001g0128others(25): Show | 31 | 372 | 0.0833 | -2 | c.748 others(19): Show |
TMCC2 | ENSG00000133069.17 | transcript | ENST00000358024.8 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
TMCC2_chr1_205222946_205278343 | 205277180 | ATT | A | downstream_gene_variant | MODIFIER | HG01516.hp1 HG01517.hp2 HG02486.hp1 others(7): Show |
a0001 | a0001c0002a0001c0007 | a0001c0002t0001a0001c0007t0001 | a0001c0002t0001g0026a0001c0002t0001g0144a0001c0002t0001g0226others(6): Show | 10 | 372 | 0.0269 | -2 | c.*50 others(13): Show |
TMCC2 | ENSG00000133069.17 | transcript | ENST00000358024.8 | protein_coding | 3838 | chr1 | TogoVar | ||||||
TMCC3_chr12_94562122_94655557 | 94562524 | CTT | C | downstream_gene_variant | MODIFIER | HG00140.hp1 HG00408.hp1 HG00423.hp2 others(47): Show |
a0001a0003a0004others(3): Show | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(22): Show | a0001c0001t0001g0132a0001c0001t0001g0198a0001c0001t0001g0199others(47): Show | 50 | 378 | 0.1323 | -2 | c.*89 others(13): Show |
TMCC3 | ENSG00000057704.13 | transcript | ENST00000261226.9 | protein_coding | 4597 | chr12 | TogoVar | ||||||
TMCC3_chr12_94562122_94655557 | 94564924 | CTT | C | downstream_gene_variant | MODIFIER | HG02080.hp1 HG02258.hp1 HG02723.hp1 others(14): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0009a0001c0001t0010a0001c0001t0026others(7): Show | a0001c0001t0009g0182a0001c0001t0009g0184a0001c0001t0009g0186others(14): Show | 17 | 378 | 0.0450 | -2 | c.*65 others(13): Show |
TMCC3 | ENSG00000057704.13 | transcript | ENST00000261226.9 | protein_coding | 2197 | chr12 | TogoVar | ||||||
TMCC3_chr12_94562122_94655557 | 94565085 | AAC | A | downstream_gene_variant | MODIFIER | HG00140.hp2 HG00280.hp2 HG00408.hp2 others(66): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0003others(7): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0004others(24): Show | a0001c0001t0002g0048a0001c0001t0002g0058a0001c0001t0002g0066others(66): Show | 69 | 378 | 0.1825 | -2 | c.*63 others(13): Show |
TMCC3 | ENSG00000057704.13 | transcript | ENST00000261226.9 | protein_coding | 2036 | chr12 | TogoVar | ||||||
TMCC3_chr12_94562122_94655557 | 94568258 | ATT | A | 3_prime_UTR_variant | MODIFIER | HG02055.hp1 HG02071.hp1 HG02080.hp1 others(11): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0009a0001c0001t0026a0001c0001t0061others(4): Show | a0001c0001t0009g0182a0001c0001t0009g0184a0001c0001t0009g0186others(11): Show | 14 | 378 | 0.0370 | -2 | c.*31 others(13): Show |
TMCC3 | ENSG00000057704.13 | transcript | ENST00000261226.9 | protein_coding | 4/4 | 3175 | chr12 | TogoVar | |||||
TMCC3_chr12_94562122_94655557 | 94590260 | ATT | A | intron_variant | MODIFIER | HG00408.hp1 HG00423.hp2 HG01433.hp2 others(22): Show |
a0001a0003a0006others(1): Show | a0001c0002a0001c0003a0001c0004others(3): Show | a0001c0002t0001a0001c0002t0003a0001c0002t0004others(13): Show | a0001c0002t0001g0038a0001c0002t0001g0039a0001c0002t0001g0071others(22): Show | 25 | 378 | 0.0661 | -2 | c.79- others(17): Show |
TMCC3 | ENSG00000057704.13 | transcript | ENST00000261226.9 | protein_coding | 1/3 | chr12 | TogoVar | ||||||
TMCC3_chr12_94562122_94655557 | 94594198 | AAT | A | intron_variant | MODIFIER | HG00140.hp2 HG00323.hp2 HG00408.hp1 others(141): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0002a0001c0003others(13): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0009others(67): Show | a0001c0001t0002g0059a0001c0001t0002g0096a0001c0001t0002g0230others(141): Show | 144 | 378 | 0.3810 | -2 | c.79- others(19): Show |
TMCC3 | ENSG00000057704.13 | transcript | ENST00000261226.9 | protein_coding | 1/3 | chr12 | TogoVar | ||||||
TMCC3_chr12_94562122_94655557 | 94594216 | TAC | T | intron_variant | MODIFIER | HG01884.hp2 HG02922.hp1 HG03098.hp1 others(5): Show |
a0001a0002 | a0001c0003a0001c0004a0002c0007 | a0001c0003t0001a0001c0003t0011a0001c0004t0018others(3): Show | a0001c0003t0001g0032a0001c0003t0011g0355a0001c0004t0018g0019others(5): Show | 8 | 378 | 0.0212 | -2 | c.79- others(19): Show |
TMCC3 | ENSG00000057704.13 | transcript | ENST00000261226.9 | protein_coding | 1/3 | chr12 | TogoVar | ||||||
TMCC3_chr12_94562122_94655557 | 94597122 | TAC | T | intron_variant | MODIFIER | HG00544.hp2 HG01175.hp1 HG01358.hp1 others(5): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0012 | a0001c0001t0002a0001c0001t0004a0001c0003t0013others(3): Show | a0001c0001t0002g0064a0001c0001t0004g0272a0001c0001t0004g0282others(5): Show | 8 | 378 | 0.0212 | -2 | c.79- others(19): Show |
TMCC3 | ENSG00000057704.13 | transcript | ENST00000261226.9 | protein_coding | 1/3 | chr12 | TogoVar | ||||||
TMCC3_chr12_94562122_94655557 | 94597124 | CAT | C | intron_variant | MODIFIER | HG00423.hp1 HG01099.hp2 HG01167.hp2 others(30): Show |
a0001a0007 | a0001c0001a0001c0002a0001c0003others(2): Show | a0001c0001t0001a0001c0001t0004a0001c0001t0061others(9): Show | a0001c0001t0001g0132a0001c0001t0004g0299a0001c0001t0061g0280others(30): Show | 33 | 378 | 0.0873 | -2 | c.79- others(19): Show |
TMCC3 | ENSG00000057704.13 | transcript | ENST00000261226.9 | protein_coding | 1/3 | chr12 | TogoVar | ||||||
TMCC3_chr12_94562122_94655557 | 94597157 | ATG | A | intron_variant | MODIFIER | HG01109.hp1 HG02145.hp1 HG02717.hp2 others(4): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0002a0001c0004t0015a0001c0004t0034others(1): Show | a0001c0001t0002g0059a0001c0001t0002g0096a0001c0001t0002g0230others(4): Show | 7 | 378 | 0.0185 | -2 | c.79- others(19): Show |
TMCC3 | ENSG00000057704.13 | transcript | ENST00000261226.9 | protein_coding | 1/3 | chr12 | TogoVar | ||||||
TMCC3_chr12_94562122_94655557 | 94600240 | GTT | G | intron_variant | MODIFIER | HG00438.hp1 HG00609.hp1 HG00621.hp2 others(64): Show |
a0001a0004 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(31): Show | a0001c0001t0001g0017a0001c0001t0001g0198a0001c0001t0001g0199others(64): Show | 67 | 378 | 0.1773 | -2 | c.79- others(19): Show |
TMCC3 | ENSG00000057704.13 | transcript | ENST00000261226.9 | protein_coding | 1/3 | chr12 | TogoVar | ||||||
TMCC3_chr12_94562122_94655557 | 94606370 | CTT | C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(68): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(3): Show | a0001c0001t0002a0001c0001t0004a0001c0001t0059others(23): Show | a0001c0001t0002g0064a0001c0001t0004g0261a0001c0001t0004g0264others(68): Show | 71 | 378 | 0.1878 | -2 | c.79- others(19): Show |
TMCC3 | ENSG00000057704.13 | transcript | ENST00000261226.9 | protein_coding | 1/3 | chr12 | TogoVar | ||||||
TMCC3_chr12_94562122_94655557 | 94607285 | AAC | A | intron_variant | MODIFIER | HG00140.hp2 HG00544.hp2 HG00639.hp1 others(108): Show |
a0001a0002a0008others(1): Show | a0001c0001a0001c0002a0001c0003others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(50): Show | a0001c0001t0001g0017a0001c0001t0001g0151a0001c0001t0001g0152others(108): Show | 111 | 378 | 0.2937 | -2 | c.79- others(19): Show |
TMCC3 | ENSG00000057704.13 | transcript | ENST00000261226.9 | protein_coding | 1/3 | chr12 | TogoVar | ||||||
TMCC3_chr12_94562122_94655557 | 94613103 | TAC | T | intron_variant | MODIFIER | HG00558.hp1 HG00738.hp1 HG02257.hp1 others(11): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0002a0001c0001t0010a0001c0002t0001others(8): Show | a0001c0001t0002g0197a0001c0001t0010g0031a0001c0002t0001g0136others(11): Show | 14 | 378 | 0.0370 | -2 | c.79- others(19): Show |
TMCC3 | ENSG00000057704.13 | transcript | ENST00000261226.9 | protein_coding | 1/3 | chr12 | TogoVar | ||||||
TMCC3_chr12_94562122_94655557 | 94615886 | ACT | A | intron_variant | MODIFIER | HG01884.hp2 HG02922.hp1 HG02965.hp2 others(7): Show |
a0001a0002 | a0001c0001a0001c0003a0001c0004others(1): Show | a0001c0001t0004a0001c0003t0001a0001c0003t0011others(5): Show | a0001c0001t0004g0323a0001c0003t0001g0032a0001c0003t0011g0355others(7): Show | 10 | 378 | 0.0265 | -2 | c.79- others(19): Show |
TMCC3 | ENSG00000057704.13 | transcript | ENST00000261226.9 | protein_coding | 1/3 | chr12 | TogoVar | ||||||
TMCC3_chr12_94562122_94655557 | 94620316 | CTT | C | intron_variant | MODIFIER | HG00408.hp1 HG02083.hp1 HG02165.hp1 others(2): Show |
a0001a0006 | a0001c0002a0006c0018 | a0001c0002t0001a0001c0002t0013a0006c0018t0001 | a0001c0002t0001g0071a0001c0002t0001g0072a0001c0002t0001g0080others(2): Show | 5 | 378 | 0.0132 | -2 | c.78+ others(19): Show |
TMCC3 | ENSG00000057704.13 | transcript | ENST00000261226.9 | protein_coding | 1/3 | chr12 | TogoVar | ||||||
TMCC3_chr12_94562122_94655557 | 94622820 | TAA | T | intron_variant | MODIFIER | HG01099.hp1 HG01496.hp1 HG02735.hp2 others(4): Show |
a0001 | a0001c0001a0001c0002a0001c0003others(1): Show | a0001c0001t0001a0001c0002t0001a0001c0003t0001others(2): Show | a0001c0001t0001g0151a0001c0002t0001g0171a0001c0002t0001g0226others(4): Show | 7 | 378 | 0.0185 | -2 | c.78+ others(19): Show |
TMCC3 | ENSG00000057704.13 | transcript | ENST00000261226.9 | protein_coding | 1/3 | chr12 | TogoVar | ||||||
TMCC3_chr12_94562122_94655557 | 94623080 | CAT | C | intron_variant | MODIFIER | HG01106.hp2 HG01168.hp2 HG01255.hp2 others(5): Show |
a0001a0003 | a0001c0001a0001c0002a0003c0029 | a0001c0001t0002a0001c0001t0053a0001c0002t0002others(1): Show | a0001c0001t0002g0048a0001c0001t0002g0104a0001c0001t0002g0106others(5): Show | 8 | 378 | 0.0212 | -2 | c.78+ others(19): Show |
TMCC3 | ENSG00000057704.13 | transcript | ENST00000261226.9 | protein_coding | 1/3 | chr12 | TogoVar | ||||||
TMCC3_chr12_94562122_94655557 | 94624725 | AAT | A | intron_variant | MODIFIER | HG00280.hp2 HG00408.hp2 HG00438.hp1 others(114): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0002a0001c0003others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(40): Show | a0001c0001t0001g0017a0001c0001t0001g0198a0001c0001t0001g0199others(114): Show | 117 | 378 | 0.3095 | -2 | c.78+ others(19): Show |
TMCC3 | ENSG00000057704.13 | transcript | ENST00000261226.9 | protein_coding | 1/3 | chr12 | TogoVar | ||||||
TMCC3_chr12_94562122_94655557 | 94630256 | CAA | C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(275): Show |
a0001a0002a0003others(7): Show | a0001c0001a0001c0002a0001c0003others(21): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(92): Show | a0001c0001t0001g0017a0001c0001t0001g0151a0001c0001t0001g0152others(275): Show | 278 | 378 | 0.7355 | -2 | c.78+ others(19): Show |
TMCC3 | ENSG00000057704.13 | transcript | ENST00000261226.9 | protein_coding | 1/3 | chr12 | TogoVar | ||||||
TMCC3_chr12_94562122_94655557 | 94635660 | GTT | G | intron_variant | MODIFIER | HG00558.hp1 HG01071.hp2 HG02258.hp1 others(6): Show |
a0001a0004a0010 | a0001c0001a0001c0002a0001c0003others(4): Show | a0001c0001t0002a0001c0002t0001a0001c0003t0022others(5): Show | a0001c0001t0002g0066a0001c0001t0002g0197a0001c0002t0001g0063others(6): Show | 9 | 378 | 0.0238 | -2 | c.78+ others(19): Show |
TMCC3 | ENSG00000057704.13 | transcript | ENST00000261226.9 | protein_coding | 1/3 | chr12 | TogoVar | ||||||
TMCC3_chr12_94562122_94655557 | 94635990 | CCT | C | intron_variant | MODIFIER | HG01099.hp1 HG01256.hp1 HG01258.hp1 others(1): Show |
a0001 | a0001c0002a0001c0003 | a0001c0002t0002a0001c0003t0001 | a0001c0002t0002g0157a0001c0003t0001g0158a0001c0003t0001g0159others(1): Show | 4 | 378 | 0.0106 | -2 | c.78+ others(19): Show |
TMCC3 | ENSG00000057704.13 | transcript | ENST00000261226.9 | protein_coding | 1/3 | chr12 | TogoVar | ||||||
TMCC3_chr12_94562122_94655557 | 94652799 | GGT | G | upstream_gene_variant | MODIFIER | HG02109.hp2 HG02145.hp1 HG03195.hp2 others(5): Show |
a0001 | a0001c0001a0001c0003a0001c0004 | a0001c0001t0002a0001c0003t0001a0001c0003t0018others(3): Show | a0001c0001t0002g0180a0001c0001t0002g0238a0001c0003t0001g0190others(5): Show | 8 | 378 | 0.0212 | -2 | c.-23 others(13): Show |
TMCC3 | ENSG00000057704.13 | transcript | ENST00000261226.9 | protein_coding | 2243 | chr12 | TogoVar | ||||||
TMCO1_chr1_165721795_165773868 | 165722127 | CAA | C | downstream_gene_variant | MODIFIER | HG01891.hp2 HG02109.hp2 HG02280.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0233a0001c0001t0001g0234a0001c0001t0001g0235others(6): Show | 9 | 374 | 0.0241 | -2 | c.*58 others(13): Show |
TMCO1 | ENSG00000143183.18 | transcript | ENST00000367881.11 | protein_coding | 4667 | chr1 | TogoVar | ||||||
TMCO1_chr1_165721795_165773868 | 165725024 | CTA | C | downstream_gene_variant | MODIFIER | HG01255.hp1 HG02451.hp1 HG02809.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0333a0001c0001t0001g0334a0001c0001t0001g0336others(1): Show | 4 | 374 | 0.0107 | -2 | c.*29 others(13): Show |
TMCO1 | ENSG00000143183.18 | transcript | ENST00000367881.11 | protein_coding | 1770 | chr1 | TogoVar | ||||||
TMCO1_chr1_165721795_165773868 | 165729103 | TAA | T | intron_variant | MODIFIER | HG02559.hp1 HG02683.hp1 HG02886.hp1 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004a0001c0001t0005 | a0001c0001t0001g0101a0001c0001t0001g0125a0001c0001t0001g0296others(5): Show | 8 | 374 | 0.0214 | -2 | c.469 others(17): Show |
TMCO1 | ENSG00000143183.18 | transcript | ENST00000367881.11 | protein_coding | 6/6 | chr1 | TogoVar | ||||||
TMCO1_chr1_165721795_165773868 | 165732477 | TTC | T | intron_variant | MODIFIER | HG02145.hp2 HG02559.hp2 HG03130.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0115a0001c0001t0001g0211a0001c0001t0001g0212 | 3 | 374 | 0.0080 | -2 | c.469 others(19): Show |
TMCO1 | ENSG00000143183.18 | transcript | ENST00000367881.11 | protein_coding | 6/6 | chr1 | TogoVar | ||||||
TMCO1_chr1_165721795_165773868 | 165732505 | CTA | C | intron_variant | MODIFIER | HG02258.hp1 HG02451.hp1 NA19043.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0017a0001c0001t0001g0334a0001c0001t0001g0335 | 4 | 374 | 0.0107 | -2 | c.469 others(19): Show |
TMCO1 | ENSG00000143183.18 | transcript | ENST00000367881.11 | protein_coding | 6/6 | chr1 | TogoVar | ||||||
TMCO1_chr1_165721795_165773868 | 165734464 | ACT | A | intron_variant | MODIFIER | HG00140.hp2 HG00423.hp2 HG00609.hp2 others(65): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0014 | a0001c0001t0001g0001a0001c0001t0001g0011a0001c0001t0001g0012others(57): Show | 68 | 374 | 0.1818 | -2 | c.469 others(19): Show |
TMCO1 | ENSG00000143183.18 | transcript | ENST00000367881.11 | protein_coding | 6/6 | chr1 | TogoVar | ||||||
TMCO1_chr1_165721795_165773868 | 165744790 | CAA | C | intron_variant | MODIFIER | HG00099.hp2 HG00323.hp1 HG00408.hp1 others(56): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(3): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0054others(54): Show | 59 | 374 | 0.1578 | -2 | c.324 others(19): Show |
TMCO1 | ENSG00000143183.18 | transcript | ENST00000367881.11 | protein_coding | 5/6 | chr1 | TogoVar | ||||||
TMCO1_chr1_165721795_165773868 | 165745474 | CAA | C | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(216): Show |
a0001 | a0001c0001a0001c0002a0001c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0006others(8): Show | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0005others(200): Show | 219 | 374 | 0.5856 | -2 | c.324 others(19): Show |
TMCO1 | ENSG00000143183.18 | transcript | ENST00000367881.11 | protein_coding | 5/6 | chr1 | TogoVar | ||||||
TMCO1_chr1_165721795_165773868 | 165746453 | TCA | T | intron_variant | MODIFIER | HG00408.hp1 HG00642.hp2 HG01099.hp2 others(43): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0006a0001c0001t0007others(3): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0056others(41): Show | 46 | 374 | 0.1230 | -2 | c.324 others(19): Show |
TMCO1 | ENSG00000143183.18 | transcript | ENST00000367881.11 | protein_coding | 5/6 | chr1 | TogoVar | ||||||
TMCO1_chr1_165721795_165773868 | 165747267 | CAA | C | intron_variant | MODIFIER | HG00609.hp2 HG00642.hp2 HG02071.hp2 others(24): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0003a0001c0001t0005others(1): Show | a0001c0001t0001g0038a0001c0001t0001g0057a0001c0001t0001g0077others(24): Show | 27 | 374 | 0.0722 | -2 | c.324 others(19): Show |
TMCO1 | ENSG00000143183.18 | transcript | ENST00000367881.11 | protein_coding | 5/6 | chr1 | TogoVar | ||||||
TMCO1_chr1_165721795_165773868 | 165760432 | CAA | C | intron_variant | MODIFIER | HG01070.hp1 HG01099.hp2 HG01496.hp2 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0113a0001c0001t0001g0119a0001c0001t0001g0120others(6): Show | 9 | 374 | 0.0241 | -2 | c.149 others(17): Show |
TMCO1 | ENSG00000143183.18 | transcript | ENST00000367881.11 | protein_coding | 2/6 | chr1 | TogoVar | ||||||
TMCO2_chr1_40242937_40256684 | 40243453 | CAA | C | upstream_gene_variant | MODIFIER | HG00423.hp2 HG00558.hp1 HG01496.hp2 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0011a0001c0001t0001g0091a0001c0001t0001g0092others(1): Show | 15 | 426 | 0.0352 | -2 | c.-45 others(13): Show |
TMCO2 | ENSG00000188800.6 | transcript | ENST00000372766.4 | protein_coding | 4483 | chr1 | TogoVar | ||||||
TMCO2_chr1_40242937_40256684 | 40249255 | ATG | A | intron_variant | MODIFIER | HG00140.hp2 HG00323.hp2 HG00423.hp1 others(90): Show |
a0001a0003 | a0001c0001a0003c0004 | a0001c0001t0001a0003c0004t0001 | a0001c0001t0001g0003a0001c0001t0001g0005a0001c0001t0001g0008others(14): Show | 93 | 426 | 0.2183 | -2 | c.237 others(19): Show |
TMCO2 | ENSG00000188800.6 | transcript | ENST00000372766.4 | protein_coding | 1/1 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | |||||
TMCO2_chr1_40242937_40256684 | 40252261 | CTT | C | downstream_gene_variant | MODIFIER | HG00423.hp2 HG00558.hp1 HG01070.hp1 others(14): Show |
a0001a0003 | a0001c0001a0003c0004 | a0001c0001t0001a0003c0004t0001 | a0001c0001t0001g0011a0001c0001t0001g0016a0001c0001t0001g0017others(4): Show | 17 | 426 | 0.0399 | -2 | c.*66 others(11): Show |
TMCO2 | ENSG00000188800.6 | transcript | ENST00000372766.4 | protein_coding | 578 | chr1 | TogoVar | ||||||
TMCO3_chr13_113486021_113555229 | 113498667 | ATT | A | intron_variant | MODIFIER | HG02717.hp1 HG03516.hp2 NA20300.hp2 |
a0001 | a0001c0009 | a0001c0009t0004 | a0001c0009t0004g0305a0001c0009t0004g0306a0001c0009t0004g0307 | 3 | 368 | 0.0082 | -2 | c.624 others(17): Show |
TMCO3 | ENSG00000150403.18 | transcript | ENST00000434316.7 | protein_coding | 3/12 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
TMCO3_chr13_113486021_113555229 | 113498878 | CAA | C | intron_variant | MODIFIER | HG00423.hp1 HG00423.hp2 HG00597.hp2 others(74): Show |
a0003a0005a0007others(1): Show | a0003c0002a0003c0016a0003c0023others(3): Show | a0003c0002t0002a0003c0016t0002a0003c0023t0002others(3): Show | a0003c0002t0002g0006a0003c0002t0002g0008a0003c0002t0002g0009others(69): Show | 77 | 368 | 0.2092 | -2 | c.624 others(17): Show |
TMCO3 | ENSG00000150403.18 | transcript | ENST00000434316.7 | protein_coding | 3/12 | chr13 | TogoVar | ||||||
TMCO3_chr13_113486021_113555229 | 113498897 | CAG | C | intron_variant | MODIFIER | HG00423.hp1 HG00423.hp2 HG00597.hp2 others(74): Show |
a0003a0005a0007others(1): Show | a0003c0002a0003c0016a0003c0023others(3): Show | a0003c0002t0002a0003c0016t0002a0003c0023t0002others(3): Show | a0003c0002t0002g0006a0003c0002t0002g0008a0003c0002t0002g0009others(69): Show | 77 | 368 | 0.2092 | -2 | c.624 others(17): Show |
TMCO3 | ENSG00000150403.18 | transcript | ENST00000434316.7 | protein_coding | 3/12 | chr13 | TogoVar | ||||||
TMCO3_chr13_113486021_113555229 | 113503345 | TTG | T | intron_variant | MODIFIER | HG00733.hp1 HG00741.hp2 HG01099.hp2 others(24): Show |
a0001a0002 | a0001c0001a0001c0005a0001c0007others(2): Show | a0001c0001t0001a0001c0005t0001a0001c0007t0006others(2): Show | a0001c0001t0001g0118a0001c0001t0001g0119a0001c0001t0001g0177others(24): Show | 27 | 368 | 0.0734 | -2 | c.946 others(17): Show |
TMCO3 | ENSG00000150403.18 | transcript | ENST00000434316.7 | protein_coding | 5/12 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
TMCO3_chr13_113486021_113555229 | 113506556 | TGA | T | intron_variant | MODIFIER | HG00597.hp2 HG02572.hp2 HG04228.hp2 others(4): Show |
a0003 | a0003c0002a0003c0023 | a0003c0002t0002a0003c0023t0002 | a0003c0002t0002g0028a0003c0002t0002g0062a0003c0002t0002g0063others(4): Show | 7 | 368 | 0.0190 | -2 | c.103 others(21): Show |
TMCO3 | ENSG00000150403.18 | transcript | ENST00000434316.7 | protein_coding | 6/12 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
TMCO3_chr13_113486021_113555229 | 113511122 | CCT | C | intron_variant | MODIFIER | HG02572.hp1 HG02647.hp1 NA18522.hp2 |
a0002 | a0002c0004 | a0002c0004t0005 | a0002c0004t0005g0310a0002c0004t0005g0311a0002c0004t0005g0312 | 3 | 368 | 0.0082 | -2 | c.122 others(19): Show |
TMCO3 | ENSG00000150403.18 | transcript | ENST00000434316.7 | protein_coding | 7/12 | chr13 | TogoVar | ||||||
TMCO3_chr13_113486021_113555229 | 113512286 | GTA | G | intron_variant | MODIFIER | HG00423.hp1 HG00423.hp2 HG00597.hp2 others(74): Show |
a0003a0005a0007others(1): Show | a0003c0002a0003c0016a0003c0023others(3): Show | a0003c0002t0002a0003c0016t0002a0003c0023t0002others(3): Show | a0003c0002t0002g0006a0003c0002t0002g0008a0003c0002t0002g0009others(69): Show | 77 | 368 | 0.2092 | -2 | c.122 others(21): Show |
TMCO3 | ENSG00000150403.18 | transcript | ENST00000434316.7 | protein_coding | 7/12 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
TMCO3_chr13_113486021_113555229 | 113513392 | CAG | C | intron_variant | MODIFIER | HG00423.hp1 HG00423.hp2 HG00597.hp2 others(74): Show |
a0003a0005a0007others(1): Show | a0003c0002a0003c0016a0003c0023others(3): Show | a0003c0002t0002a0003c0016t0002a0003c0023t0002others(3): Show | a0003c0002t0002g0006a0003c0002t0002g0008a0003c0002t0002g0009others(69): Show | 77 | 368 | 0.2092 | -2 | c.122 others(21): Show |
TMCO3 | ENSG00000150403.18 | transcript | ENST00000434316.7 | protein_coding | 7/12 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
TMCO3_chr13_113486021_113555229 | 113519830 | CTG | C | intron_variant | MODIFIER | HG02145.hp1 HG02559.hp1 HG02717.hp2 others(1): Show |
a0002a0013 | a0002c0004a0013c0018 | a0002c0004t0004a0013c0018t0004 | a0002c0004t0004g0011a0002c0004t0004g0091a0013c0018t0004g0090 | 4 | 368 | 0.0109 | -2 | c.122 others(19): Show |
TMCO3 | ENSG00000150403.18 | transcript | ENST00000434316.7 | protein_coding | 7/12 | INFO_REALIGN_3_PRIME | chr13 | TogoVar | |||||
TMCO3_chr13_113486021_113555229 | 113523136 | CTT | C | intron_variant | MODIFIER | HG00423.hp1 HG00423.hp2 HG00597.hp2 others(75): Show |
a0003a0005a0007others(1): Show | a0003c0002a0003c0014a0003c0016others(4): Show | a0003c0002t0002a0003c0014t0009a0003c0016t0002others(4): Show | a0003c0002t0002g0006a0003c0002t0002g0008a0003c0002t0002g0009others(70): Show | 78 | 368 | 0.2120 | -2 | c.134 others(21): Show |
TMCO3 | ENSG00000150403.18 | transcript | ENST00000434316.7 | protein_coding | 8/12 | INFO_REALIGN_3_PRIME | chr13 | TogoVar |