regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TMPRSS6_chr22_37060436_37114713 | 37111388 | CTG | C | upstream_gene_variant | MODIFIER | HG00642.hp1 HG00741.hp2 HG01358.hp2 others(3): Show |
a0001a0003a0004 | a0001c0004a0003c0002a0004c0003others(1): Show | a0001c0004t0001a0003c0002t0001a0004c0003t0001others(2): Show | a0001c0004t0001g0317a0003c0002t0001g0294a0004c0003t0001g0304others(2): Show | 6 | 348 | 0.0172 | -2 | c.-18 others(13): Show |
TMPRSS6 | ENSG00000187045.19 | transcript | ENST00000676104.1 | protein_coding | 1676 | chr22 | TogoVar | ||||||
TMPRSS7_chr3_112029736_112086269 | 112033462 | CAA | C | upstream_gene_variant | MODIFIER | HG00735.hp2 HG01256.hp2 HG01361.hp1 others(33): Show |
a0001a0002a0003others(6): Show | a0001c0001a0001c0002a0001c0004others(11): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(13): Show | a0001c0001t0001g0006a0001c0001t0001g0183a0001c0001t0001g0203others(33): Show | 36 | 420 | 0.0857 | -2 | c.-13 others(13): Show |
TMPRSS7 | ENSG00000176040.14 | transcript | ENST00000452346.7 | protein_coding | 1273 | chr3 | TogoVar | ||||||
TMPRSS7_chr3_112029736_112086269 | 112054729 | CTT | C | intron_variant | MODIFIER | HG00735.hp2 HG01884.hp2 HG01891.hp2 others(3): Show |
a0001a0003a0010 | a0001c0002a0001c0017a0003c0027others(1): Show | a0001c0002t0001a0001c0017t0003a0003c0027t0001others(1): Show | a0001c0002t0001g0292a0001c0017t0003g0065a0001c0017t0003g0067others(3): Show | 6 | 420 | 0.0143 | -2 | c.120 others(21): Show |
TMPRSS7 | ENSG00000176040.14 | transcript | ENST00000452346.7 | protein_coding | 9/17 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
TMPRSS7_chr3_112029736_112086269 | 112073089 | CTT | C | intron_variant | MODIFIER | HG00733.hp2 HG00735.hp1 HG01975.hp2 others(3): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0004t0001 | a0001c0001t0001g0012a0001c0001t0001g0130a0001c0001t0001g0345others(2): Show | 6 | 420 | 0.0143 | -2 | c.166 others(21): Show |
TMPRSS7 | ENSG00000176040.14 | transcript | ENST00000452346.7 | protein_coding | 13/17 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | |||||
TMPRSS7_chr3_112029736_112086269 | 112085549 | TTG | T | downstream_gene_variant | MODIFIER | HG00140.hp1 HG01361.hp2 HG01884.hp1 others(21): Show |
a0001a0002a0003others(6): Show | a0001c0001a0001c0032a0002c0045others(11): Show | a0001c0001t0001a0001c0032t0001a0002c0045t0004others(11): Show | a0001c0001t0001g0130a0001c0001t0001g0147a0001c0001t0001g0215others(21): Show | 24 | 420 | 0.0571 | -2 | c.*44 others(13): Show |
TMPRSS7 | ENSG00000176040.14 | transcript | ENST00000452346.7 | protein_coding | 4281 | chr3 | TogoVar | ||||||
TMPRSS9_chr19_2355265_2431261 | 2359758 | AAC | A | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00423.hp1 others(28): Show |
a0001a0002a0003others(6): Show | a0001c0001a0001c0027a0002c0002others(9): Show | a0001c0001t0001a0001c0027t0002a0002c0002t0001others(9): Show | a0001c0001t0001g0047a0001c0001t0001g0052a0001c0001t0001g0053others(28): Show | 31 | 114 | 0.2719 | -2 | c.-62 others(11): Show |
TMPRSS9 | ENSG00000178297.15 | transcript | ENST00000696167.1 | protein_coding | 506 | chr19 | TogoVar | ||||||
TMPRSS9_chr19_2355265_2431261 | 2363787 | TGA | T | intron_variant | MODIFIER | HG00099.hp2 HG01106.hp2 HG01934.hp1 others(15): Show |
a0001a0002a0005others(5): Show | a0001c0001a0001c0013a0002c0002others(8): Show | a0001c0001t0001a0001c0013t0001a0002c0002t0001others(8): Show | a0001c0001t0001g0047a0001c0001t0001g0081a0001c0001t0001g0108others(15): Show | 18 | 114 | 0.1579 | -2 | c.-26 others(19): Show |
TMPRSS9 | ENSG00000178297.15 | transcript | ENST00000696167.1 | protein_coding | 1/18 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
TMPRSS9_chr19_2355265_2431261 | 2363805 | CGT | C | intron_variant | MODIFIER | HG00609.hp1 HG00642.hp2 HG01934.hp2 others(13): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0027a0002c0002others(6): Show | a0001c0001t0001a0001c0027t0002a0002c0002t0001others(6): Show | a0001c0001t0001g0093a0001c0001t0001g0094a0001c0001t0001g0095others(13): Show | 16 | 114 | 0.1404 | -2 | c.-26 others(19): Show |
TMPRSS9 | ENSG00000178297.15 | transcript | ENST00000696167.1 | protein_coding | 1/18 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
TMPRSS9_chr19_2355265_2431261 | 2369597 | ATT | A | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp1 HG00423.hp1 others(36): Show |
a0001a0002a0004others(8): Show | a0001c0001a0001c0004a0001c0013others(13): Show | a0001c0001t0001a0001c0004t0002a0001c0013t0001others(13): Show | a0001c0001t0001g0038a0001c0001t0001g0047a0001c0001t0001g0052others(36): Show | 39 | 114 | 0.3421 | -2 | c.-26 others(19): Show |
TMPRSS9 | ENSG00000178297.15 | transcript | ENST00000696167.1 | protein_coding | 1/18 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
TMPRSS9_chr19_2355265_2431261 | 2370420 | CAA | C | intron_variant | MODIFIER | HG02630.hp2 HG02647.hp2 HG02809.hp1 others(7): Show |
a0001a0002a0008others(6): Show | a0001c0001a0001c0027a0002c0002others(7): Show | a0001c0001t0001a0001c0027t0002a0002c0002t0001others(7): Show | a0001c0001t0001g0109a0001c0027t0002g0086a0002c0002t0001g0059others(7): Show | 10 | 114 | 0.0877 | -2 | c.-26 others(21): Show |
TMPRSS9 | ENSG00000178297.15 | transcript | ENST00000696167.1 | protein_coding | 1/18 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
TMPRSS9_chr19_2355265_2431261 | 2371713 | GAA | G | intron_variant | MODIFIER | HG02630.hp2 HG02647.hp2 HG02809.hp2 others(6): Show |
a0001a0009a0010others(4): Show | a0001c0001a0001c0027a0009c0031others(5): Show | a0001c0001t0001a0001c0027t0002a0009c0031t0003others(5): Show | a0001c0001t0001g0081a0001c0001t0001g0109a0001c0027t0002g0086others(6): Show | 9 | 114 | 0.0790 | -2 | c.-26 others(21): Show |
TMPRSS9 | ENSG00000178297.15 | transcript | ENST00000696167.1 | protein_coding | 1/18 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
TMPRSS9_chr19_2355265_2431261 | 2371724 | AAC | A | intron_variant | MODIFIER | HG00609.hp1 HG00642.hp2 HG01069.hp2 others(14): Show |
a0001a0003a0004 | a0001c0001a0001c0004a0001c0013others(4): Show | a0001c0001t0001a0001c0004t0002a0001c0013t0001others(4): Show | a0001c0001t0001g0068a0001c0001t0001g0093a0001c0001t0001g0095others(14): Show | 17 | 114 | 0.1491 | -2 | c.-26 others(21): Show |
TMPRSS9 | ENSG00000178297.15 | transcript | ENST00000696167.1 | protein_coding | 1/18 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
TMPRSS9_chr19_2355265_2431261 | 2372291 | CTT | C | intron_variant | MODIFIER | HG02630.hp2 HG02647.hp2 HG02809.hp2 others(7): Show |
a0001a0009a0010others(5): Show | a0001c0001a0001c0027a0009c0031others(6): Show | a0001c0001t0001a0001c0027t0002a0009c0031t0003others(6): Show | a0001c0001t0001g0081a0001c0001t0001g0109a0001c0027t0002g0086others(7): Show | 10 | 114 | 0.0877 | -2 | c.-26 others(21): Show |
TMPRSS9 | ENSG00000178297.15 | transcript | ENST00000696167.1 | protein_coding | 1/18 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
TMPRSS9_chr19_2355265_2431261 | 2390304 | GAT | G | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00423.hp2 others(45): Show |
a0002a0006a0007others(9): Show | a0002c0002a0002c0005a0002c0020others(11): Show | a0002c0002t0001a0002c0002t0002a0002c0005t0002others(12): Show | a0002c0002t0001g0012a0002c0002t0001g0014a0002c0002t0001g0016others(45): Show | 48 | 114 | 0.4211 | -2 | c.142 others(17): Show |
TMPRSS9 | ENSG00000178297.15 | transcript | ENST00000696167.1 | protein_coding | 2/18 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
TMPRSS9_chr19_2355265_2431261 | 2393898 | CAA | C | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00423.hp2 others(38): Show |
a0001a0002a0004others(8): Show | a0001c0001a0001c0004a0002c0002others(11): Show | a0001c0001t0001a0001c0004t0002a0002c0002t0001others(12): Show | a0001c0001t0001g0079a0001c0004t0002g0017a0001c0004t0002g0040others(38): Show | 41 | 114 | 0.3597 | -2 | c.143 others(19): Show |
TMPRSS9 | ENSG00000178297.15 | transcript | ENST00000696167.1 | protein_coding | 2/18 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
TMPRSS9_chr19_2355265_2431261 | 2405706 | CTT | C | intron_variant | MODIFIER | HG00609.hp1 HG00642.hp2 HG00738.hp2 others(19): Show |
a0001a0002a0004others(5): Show | a0001c0001a0001c0004a0002c0005others(6): Show | a0001c0001t0001a0001c0004t0002a0002c0005t0002others(6): Show | a0001c0001t0001g0095a0001c0004t0002g0005a0001c0004t0002g0017others(19): Show | 22 | 114 | 0.1930 | -2 | c.842 others(17): Show |
TMPRSS9 | ENSG00000178297.15 | transcript | ENST00000696167.1 | protein_coding | 8/18 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
TMPRSS9_chr19_2355265_2431261 | 2408819 | TAC | T | intron_variant | MODIFIER | HG00609.hp1 HG00642.hp2 HG00738.hp2 others(45): Show |
a0001a0002a0003others(16): Show | a0001c0001a0001c0004a0002c0005others(19): Show | a0001c0001t0001a0001c0004t0002a0002c0005t0002others(19): Show | a0001c0001t0001g0095a0001c0004t0002g0005a0001c0004t0002g0017others(45): Show | 48 | 114 | 0.4211 | -2 | c.111 others(19): Show |
TMPRSS9 | ENSG00000178297.15 | transcript | ENST00000696167.1 | protein_coding | 9/18 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
TMPRSS9_chr19_2355265_2431261 | 2411342 | CAG | C | intron_variant | MODIFIER | HG02071.hp2 HG02083.hp1 NA18970.hp2 others(2): Show |
a0005a0022 | a0005c0010a0005c0028a0022c0023 | a0005c0010t0002a0005c0028t0002a0022c0023t0002 | a0005c0010t0002g0082a0005c0010t0002g0083a0005c0010t0002g0085others(2): Show | 5 | 114 | 0.0439 | -2 | c.125 others(19): Show |
TMPRSS9 | ENSG00000178297.15 | transcript | ENST00000696167.1 | protein_coding | 10/18 | chr19 | TogoVar | ||||||
TMPRSS9_chr19_2355265_2431261 | 2414941 | ATT | A | intron_variant | MODIFIER | HG01071.hp1 HG01106.hp1 HG02015.hp2 others(15): Show |
a0003a0006a0007others(4): Show | a0003c0003a0003c0014a0006c0007others(5): Show | a0003c0003t0003a0003c0014t0003a0006c0007t0003others(5): Show | a0003c0003t0003g0004a0003c0003t0003g0058a0003c0003t0003g0063others(15): Show | 18 | 114 | 0.1579 | -2 | c.157 others(19): Show |
TMPRSS9 | ENSG00000178297.15 | transcript | ENST00000696167.1 | protein_coding | 11/18 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
TMPRSS9_chr19_2355265_2431261 | 2418345 | CTT | C | intron_variant | MODIFIER | HG03139.hp2 HG03540.hp2 |
a0011a0012 | a0011c0032a0012c0029 | a0011c0032t0002a0012c0029t0003 | a0011c0032t0002g0065a0012c0029t0003g0009 | 2 | 114 | 0.0175 | -2 | c.215 others(19): Show |
TMPRSS9 | ENSG00000178297.15 | transcript | ENST00000696167.1 | protein_coding | 14/18 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
TMPRSS9_chr19_2355265_2431261 | 2418396 | TGG | T | intron_variant | MODIFIER | HG02004.hp1 HG02630.hp1 HG02809.hp1 |
a0008a0019 | a0008c0012a0008c0024a0019c0022 | a0008c0012t0001a0008c0024t0002a0019c0022t0002 | a0008c0012t0001g0104a0008c0024t0002g0114a0019c0022t0002g0106 | 3 | 114 | 0.0263 | -2 | c.215 others(19): Show |
TMPRSS9 | ENSG00000178297.15 | transcript | ENST00000696167.1 | protein_coding | 14/18 | chr19 | TogoVar | ||||||
TMPRSS9_chr19_2355265_2431261 | 2420441 | CAA | C | intron_variant | MODIFIER | HG00099.hp2 HG01069.hp2 HG01071.hp1 others(14): Show |
a0001a0003a0006others(3): Show | a0001c0001a0003c0003a0003c0014others(4): Show | a0001c0001t0001a0003c0003t0003a0003c0014t0003others(4): Show | a0001c0001t0001g0047a0003c0003t0003g0003a0003c0003t0003g0004others(14): Show | 17 | 114 | 0.1491 | -2 | c.215 others(21): Show |
TMPRSS9 | ENSG00000178297.15 | transcript | ENST00000696167.1 | protein_coding | 14/18 | INFO_REALIGN_3_PRIME | chr19 | TogoVar | |||||
TMPRSS9_chr19_2355265_2431261 | 2426665 | AAT | A | downstream_gene_variant | MODIFIER | HG01069.hp2 HG01071.hp1 HG01106.hp1 others(12): Show |
a0003a0006a0007 | a0003c0003a0003c0014a0006c0007others(1): Show | a0003c0003t0003a0003c0014t0003a0006c0007t0003others(1): Show | a0003c0003t0003g0003a0003c0003t0003g0004a0003c0003t0003g0058others(12): Show | 15 | 114 | 0.1316 | -2 | c.*57 others(11): Show |
TMPRSS9 | ENSG00000178297.15 | transcript | ENST00000696167.1 | protein_coding | 405 | chr19 | TogoVar | ||||||
TMSB10_chr2_84900656_84911671 | 84903969 | GAA | G | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG01069.hp2 others(23): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0002t0001 | a0001c0001t0001g0001a0001c0001t0002g0001a0001c0002t0001g0002 | 26 | 356 | 0.0730 | -2 | c.-17 others(13): Show |
TMSB10 | ENSG00000034510.6 | transcript | ENST00000233143.6 | protein_coding | 1686 | chr2 | TogoVar | ||||||
TMSB10_chr2_84900656_84911671 | 84907774 | CTT | C | downstream_gene_variant | MODIFIER | HG00558.hp1 HG00735.hp1 HG00741.hp2 others(38): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0001t0002a0001c0002t0001 | a0001c0001t0001g0001a0001c0001t0001g0009a0001c0001t0002g0001others(1): Show | 41 | 356 | 0.1152 | -2 | c.*13 others(13): Show |
TMSB10 | ENSG00000034510.6 | transcript | ENST00000233143.6 | protein_coding | 1104 | chr2 | TogoVar | ||||||
TMSB15A_chrX_102508682_102521739 | 102516824 | ACC | A | upstream_gene_variant | MODIFIER | HG00140.hp1 HG00323.hp2 HG00423.hp1 others(23): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(2): Show | 26 | 291 | 0.0894 | -2 | c.-17 others(11): Show |
TMSB15A | ENSG00000158164.7 | transcript | ENST00000289373.5 | protein_coding | 86 | chrX | TogoVar | ||||||
TMSB15B_chrX_103957627_103970976 | 103965337 | GTT | G | intron_variant | MODIFIER | NA18998.hp2 | a0000 | a0000c0002 | a0000c0002t0006 | a0000c0002t0006g0018 | 1 | 268 | 0.0037 | -2 | c.101 others(17): Show |
TMSB15B | ENSG00000158427.15 | transcript | ENST00000540220.6 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
TMSB15B_chrX_103957627_103970976 | 103967151 | GTC | G | downstream_gene_variant | MODIFIER | HG02809.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | 1 | 268 | 0.0037 | -2 | c.*15 others(13): Show |
TMSB15B | ENSG00000158427.15 | transcript | ENST00000540220.6 | protein_coding | 1176 | chrX | TogoVar | ||||||
TMSB15B_chrX_103957627_103970976 | 103968971 | CTT | C | downstream_gene_variant | MODIFIER | NA18522.hp1 NA19011.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 2 | 268 | 0.0075 | -2 | c.*33 others(13): Show |
TMSB15B | ENSG00000158427.15 | transcript | ENST00000540220.6 | protein_coding | 2996 | chrX | TogoVar | ||||||
TMSB15B_chrX_103957627_103970976 | 103969026 | TTA | T | downstream_gene_variant | MODIFIER | NA18522.hp1 NA18986.hp1 NA19011.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001a0001c0001t0001g0002 | 3 | 268 | 0.0112 | -2 | c.*34 others(13): Show |
TMSB15B | ENSG00000158427.15 | transcript | ENST00000540220.6 | protein_coding | 3051 | chrX | TogoVar | ||||||
TMSB15B_chrX_103957627_103970976 | 103969218 | TTA | T | downstream_gene_variant | MODIFIER | NA20129.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | 1 | 268 | 0.0037 | -2 | c.*36 others(13): Show |
TMSB15B | ENSG00000158427.15 | transcript | ENST00000540220.6 | protein_coding | 3243 | chrX | TogoVar | ||||||
TMSB15B_chrX_103957627_103970976 | 103970269 | TTC | T | downstream_gene_variant | MODIFIER | NA18946.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | 1 | 268 | 0.0037 | -2 | c.*46 others(13): Show |
TMSB15B | ENSG00000158427.15 | transcript | ENST00000540220.6 | protein_coding | 4294 | chrX | TogoVar | ||||||
TMSB15C_chrX_104067887_104081236 | 104077498 | TTA | T | upstream_gene_variant | MODIFIER | NA18940.hp1 | a0001 | a0001c0001 | a0001c0001t0005 | a0001c0001t0005g0020 | 1 | 94 | 0.0106 | -2 | c.-13 others(13): Show |
TMSB15C | ENSG00000269226.8 | transcript | ENST00000598087.4 | protein_coding | 1263 | chrX | TogoVar | ||||||
TMSB15C_chrX_104067887_104081236 | 104077535 | TAA | T | upstream_gene_variant | MODIFIER | HG01175.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0017 | 1 | 94 | 0.0106 | -2 | c.-14 others(13): Show |
TMSB15C | ENSG00000269226.8 | transcript | ENST00000598087.4 | protein_coding | 1300 | chrX | TogoVar | ||||||
TMSB15C_chrX_104067887_104081236 | 104079228 | CCA | C | upstream_gene_variant | MODIFIER | NA19070.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0002 | 1 | 94 | 0.0106 | -2 | c.-31 others(13): Show |
TMSB15C | ENSG00000269226.8 | transcript | ENST00000598087.4 | protein_coding | 2993 | chrX | TogoVar | ||||||
TMSB4X_chrX_12970110_12982223 | 12976748 | CTT | C | intron_variant | MODIFIER | NA18975.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0016 | 1 | 306 | 0.0033 | -2 | c.101 others(15): Show |
TMSB4X | ENSG00000205542.11 | transcript | ENST00000451311.7 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |||||
TMSB4Y_chrY_13698899_13711024 | 13699082 | GGT | G | upstream_gene_variant | MODIFIER | HG02040.hp1 HG02132.hp1 HG02602.hp1 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 4 | 132 | 0.0303 | -2 | c.-52 others(13): Show |
TMSB4Y | ENSG00000154620.6 | transcript | ENST00000284856.4 | protein_coding | 4816 | chrY | TogoVar | ||||||
TMT1A_chr12_50920015_50937508 | 50923452 | CTT | C | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(127): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(20): Show | a0001c0001t0001g0001a0001c0001t0001g0005a0001c0001t0001g0007others(58): Show | 130 | 446 | 0.2915 | -2 | c.-15 others(13): Show |
TMT1A | ENSG00000185432.12 | transcript | ENST00000332160.5 | protein_coding | 1562 | chr12 | TogoVar | ||||||
TMT1A_chr12_50920015_50937508 | 50924516 | CTT | C | upstream_gene_variant | MODIFIER | HG00597.hp1 HG01361.hp2 HG02258.hp2 others(13): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(4): Show | a0001c0001t0001g0023a0001c0001t0001g0025a0001c0001t0001g0094others(7): Show | 16 | 446 | 0.0359 | -2 | c.-52 others(11): Show |
TMT1A | ENSG00000185432.12 | transcript | ENST00000332160.5 | protein_coding | 498 | chr12 | TogoVar | ||||||
TMT1A_chr12_50920015_50937508 | 50924529 | TAA | T | upstream_gene_variant | MODIFIER | HG01346.hp1 HG02280.hp1 HG02451.hp2 others(9): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0007a0001c0001t0014others(2): Show | a0001c0001t0001g0006a0001c0001t0007g0014a0001c0001t0007g0078others(4): Show | 12 | 446 | 0.0269 | -2 | c.-50 others(11): Show |
TMT1A | ENSG00000185432.12 | transcript | ENST00000332160.5 | protein_coding | 485 | chr12 | TogoVar | ||||||
TMT1A_chr12_50920015_50937508 | 50931090 | CTT | C | 3_prime_UTR_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00280.hp1 others(201): Show |
a0001a0002a0003 | a0001c0001a0002c0002a0003c0003 | a0001c0001t0002a0001c0001t0003a0001c0001t0008others(32): Show | a0001c0001t0002g0002a0001c0001t0002g0003a0001c0001t0002g0004others(83): Show | 204 | 446 | 0.4574 | -2 | c.*95 others(11): Show |
TMT1A | ENSG00000185432.12 | transcript | ENST00000332160.5 | protein_coding | 2/2 | 957 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||
TMT1A_chr12_50920015_50937508 | 50934900 | GAC | G | downstream_gene_variant | MODIFIER | HG00280.hp1 HG00408.hp1 HG00597.hp1 others(52): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(11): Show | a0001c0001t0001g0001a0001c0001t0001g0037a0001c0001t0002g0003others(26): Show | 55 | 446 | 0.1233 | -2 | c.*47 others(13): Show |
TMT1A | ENSG00000185432.12 | transcript | ENST00000332160.5 | protein_coding | 2393 | chr12 | TogoVar | ||||||
TMT1B_chr12_55676736_55689611 | 55682607 | CAA | C | intron_variant | MODIFIER | HG00642.hp1 HG01106.hp1 HG01175.hp1 others(26): Show |
a0001 | a0001c0001a0001c0002a0001c0011 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(4): Show | a0001c0001t0001g0010a0001c0001t0001g0046a0001c0001t0001g0065others(9): Show | 29 | 450 | 0.0644 | -2 | c.498 others(17): Show |
TMT1B | ENSG00000170439.8 | transcript | ENST00000394252.4 | protein_coding | 1/1 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
TMT1B_chr12_55676736_55689611 | 55682808 | AAG | A | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(337): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0002a0001c0007others(8): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(24): Show | a0001c0001t0001g0001a0001c0001t0001g0003a0001c0001t0001g0005others(80): Show | 340 | 450 | 0.7556 | -2 | c.498 others(17): Show |
TMT1B | ENSG00000170439.8 | transcript | ENST00000394252.4 | protein_coding | 1/1 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
TMT1B_chr12_55676736_55689611 | 55687169 | CTT | C | downstream_gene_variant | MODIFIER | HG00642.hp1 HG01106.hp1 HG01175.hp1 others(30): Show |
a0001a0008 | a0001c0001a0001c0002a0001c0007others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(8): Show | a0001c0001t0001g0003a0001c0001t0001g0011a0001c0001t0002g0015others(14): Show | 33 | 450 | 0.0733 | -2 | c.*31 others(13): Show |
TMT1B | ENSG00000170439.8 | transcript | ENST00000394252.4 | protein_coding | 2559 | chr12 | TogoVar | ||||||
TMT1B_chr12_55676736_55689611 | 55687487 | CTT | C | downstream_gene_variant | MODIFIER | HG01109.hp1 HG02622.hp1 HG02717.hp1 others(17): Show |
a0001 | a0001c0001a0001c0007 | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(1): Show | a0001c0001t0001g0002a0001c0001t0001g0003a0001c0001t0001g0008others(8): Show | 20 | 450 | 0.0444 | -2 | c.*34 others(13): Show |
TMT1B | ENSG00000170439.8 | transcript | ENST00000394252.4 | protein_coding | 2877 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29513321 | CAT | C | intron_variant | MODIFIER | HG00140.hp2 HG00558.hp1 HG01081.hp1 others(22): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0005others(9): Show | a0001c0001t0005a0001c0001t0047a0001c0002t0005others(16): Show | a0001c0001t0005g0069a0001c0001t0005g0142a0001c0001t0005g0153others(22): Show | 25 | 276 | 0.0906 | -2 | c.243 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 16/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29521564 | TTC | T | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00323.hp2 others(79): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0006others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(54): Show | a0001c0001t0001g0130a0001c0001t0001g0151a0001c0001t0001g0166others(79): Show | 82 | 276 | 0.2971 | -2 | c.178 others(19): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 11/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29521991 | CAA | C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(172): Show |
a0001a0002a0004others(1): Show | a0001c0001a0001c0002a0001c0005others(19): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(107): Show | a0001c0001t0001g0080a0001c0001t0001g0086a0001c0001t0001g0130others(172): Show | 175 | 276 | 0.6341 | -2 | c.178 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 11/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29541656 | CTT | C | intron_variant | MODIFIER | HG02486.hp1 HG02559.hp2 HG03130.hp1 others(3): Show |
a0001a0002a0004 | a0001c0012a0001c0015a0002c0027others(1): Show | a0001c0012t0010a0001c0015t0002a0001c0015t0019others(2): Show | a0001c0012t0010g0018a0001c0015t0002g0117a0001c0015t0019g0044others(3): Show | 6 | 276 | 0.0217 | -2 | c.167 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 10/17 | chr12 | TogoVar |