regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TMTC1_chr12_29495840_29788942 | 29545629 | TCA | T | intron_variant | MODIFIER | HG00423.hp1 HG00438.hp2 HG00558.hp1 others(43): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0006others(6): Show | a0001c0001t0016a0001c0001t0070a0001c0002t0001others(32): Show | a0001c0001t0016g0184a0001c0001t0070g0204a0001c0002t0001g0034others(43): Show | 46 | 276 | 0.1667 | -2 | c.167 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 10/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29548826 | TGA | T | intron_variant | MODIFIER | HG00323.hp1 HG00423.hp1 HG00438.hp2 others(173): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0005others(23): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(113): Show | a0001c0001t0001g0080a0001c0001t0002g0035a0001c0001t0002g0141others(173): Show | 176 | 276 | 0.6377 | -2 | c.167 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 10/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29550933 | CAA | C | intron_variant | MODIFIER | HG00438.hp2 HG00544.hp1 HG00544.hp2 others(21): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0006others(4): Show | a0001c0001t0020a0001c0002t0001a0001c0002t0002others(15): Show | a0001c0001t0020g0183a0001c0002t0001g0108a0001c0002t0001g0146others(21): Show | 24 | 276 | 0.0870 | -2 | c.167 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 10/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29551787 | CTT | C | intron_variant | MODIFIER | HG00738.hp2 HG01169.hp2 HG02258.hp2 others(5): Show |
a0001a0002 | a0001c0005a0001c0007a0002c0003others(2): Show | a0001c0005t0001a0001c0005t0010a0001c0005t0045others(5): Show | a0001c0005t0001g0103a0001c0005t0010g0105a0001c0005t0045g0088others(5): Show | 8 | 276 | 0.0290 | -2 | c.167 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 10/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29564942 | GAA | G | intron_variant | MODIFIER | HG02055.hp2 HG02145.hp1 HG02572.hp1 others(9): Show |
a0001a0002a0005 | a0001c0002a0001c0006a0001c0008others(4): Show | a0001c0002t0003a0001c0006t0001a0001c0006t0013others(7): Show | a0001c0002t0003g0094a0001c0002t0003g0119a0001c0006t0001g0031others(9): Show | 12 | 276 | 0.0435 | -2 | c.153 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 9/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29570830 | CGA | C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(265): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0005others(23): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(155): Show | a0001c0001t0001g0080a0001c0001t0001g0086a0001c0001t0001g0130others(265): Show | 268 | 276 | 0.9710 | -2 | c.153 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 9/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29570878 | AAC | A | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(121): Show |
a0001a0002a0005 | a0001c0001a0001c0002a0001c0005others(15): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(73): Show | a0001c0001t0001g0086a0001c0001t0001g0130a0001c0001t0001g0147others(121): Show | 124 | 276 | 0.4493 | -2 | c.153 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 9/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29571583 | TAC | T | intron_variant | MODIFIER | HG00323.hp1 HG00423.hp1 HG00438.hp2 others(130): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0005others(14): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(82): Show | a0001c0001t0001g0080a0001c0001t0002g0035a0001c0001t0002g0141others(130): Show | 133 | 276 | 0.4819 | -2 | c.153 others(19): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 9/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29573785 | GGA | G | intron_variant | MODIFIER | HG02056.hp2 HG02965.hp1 HG03017.hp1 others(3): Show |
a0001a0002 | a0001c0002a0001c0008a0002c0004others(1): Show | a0001c0002t0001a0001c0002t0056a0001c0008t0004others(2): Show | a0001c0002t0001g0162a0001c0002t0056g0067a0001c0008t0004g0062others(3): Show | 6 | 276 | 0.0217 | -2 | c.141 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 8/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29599968 | ATG | A | intron_variant | MODIFIER | HG00642.hp2 HG01081.hp1 HG01433.hp1 others(18): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0007others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(14): Show | a0001c0001t0001g0080a0001c0001t0002g0035a0001c0001t0002g0141others(18): Show | 21 | 276 | 0.0761 | -2 | c.125 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 7/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29606973 | GCC | G | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00323.hp1 others(123): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0005others(16): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(75): Show | a0001c0001t0001g0080a0001c0001t0001g0086a0001c0001t0002g0035others(123): Show | 126 | 276 | 0.4565 | -2 | c.112 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 6/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29617536 | CAG | C | intron_variant | MODIFIER | HG00642.hp2 HG01167.hp1 HG01167.hp2 others(23): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0005others(10): Show | a0001c0001t0029a0001c0002t0003a0001c0005t0045others(20): Show | a0001c0001t0029g0047a0001c0001t0029g0048a0001c0002t0003g0094others(23): Show | 26 | 276 | 0.0942 | -2 | c.112 others(23): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 6/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29627688 | CAA | C | intron_variant | MODIFIER | HG00738.hp1 HG01175.hp2 HG02280.hp2 others(7): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0006others(5): Show | a0001c0001t0009a0001c0002t0002a0001c0006t0010others(6): Show | a0001c0001t0009g0160a0001c0002t0002g0083a0001c0006t0010g0013others(7): Show | 10 | 276 | 0.0362 | -2 | c.112 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 6/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29637085 | AAC | A | intron_variant | MODIFIER | HG00099.hp1 HG01123.hp2 HG01257.hp2 others(64): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0005others(16): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(56): Show | a0001c0001t0001g0086a0001c0001t0001g0155a0001c0001t0002g0081others(64): Show | 67 | 276 | 0.2428 | -2 | c.939 others(19): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29643534 | TAA | T | intron_variant | MODIFIER | HG00099.hp1 HG00558.hp1 HG00738.hp1 others(54): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0005others(10): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(43): Show | a0001c0001t0001g0080a0001c0001t0001g0086a0001c0001t0001g0130others(54): Show | 57 | 276 | 0.2065 | -2 | c.939 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29643604 | TTA | T | intron_variant | MODIFIER | HG00423.hp1 HG00642.hp2 HG01123.hp2 others(14): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0006others(5): Show | a0001c0001t0004a0001c0001t0006a0001c0001t0026others(13): Show | a0001c0001t0004g0206a0001c0001t0006g0085a0001c0001t0026g0071others(14): Show | 17 | 276 | 0.0616 | -2 | c.939 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29643766 | CAT | C | intron_variant | MODIFIER | HG00423.hp2 HG00438.hp1 HG00438.hp2 others(51): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0005others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(37): Show | a0001c0001t0001g0181a0001c0001t0002g0195a0001c0001t0003g0196others(51): Show | 54 | 276 | 0.1957 | -2 | c.939 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29643829 | TTA | T | intron_variant | MODIFIER | HG00423.hp1 HG00642.hp2 HG01123.hp2 others(15): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0006others(5): Show | a0001c0001t0004a0001c0001t0006a0001c0001t0026others(14): Show | a0001c0001t0004g0206a0001c0001t0006g0085a0001c0001t0026g0071others(15): Show | 18 | 276 | 0.0652 | -2 | c.939 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29643992 | ATT | A | intron_variant | MODIFIER | HG02258.hp2 HG02451.hp1 HG02717.hp1 others(4): Show |
a0001a0002a0004 | a0001c0001a0001c0005a0001c0006others(3): Show | a0001c0001t0027a0001c0005t0010a0001c0006t0024others(3): Show | a0001c0001t0027g0101a0001c0005t0010g0105a0001c0006t0024g0023others(4): Show | 7 | 276 | 0.0254 | -2 | c.939 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29644104 | AAT | A | intron_variant | MODIFIER | HG00738.hp2 HG02257.hp2 HG03098.hp2 others(3): Show |
a0001a0002 | a0001c0002a0001c0006a0001c0021others(2): Show | a0001c0002t0003a0001c0002t0013a0001c0006t0071others(3): Show | a0001c0002t0003g0057a0001c0002t0013g0115a0001c0006t0071g0026others(3): Show | 6 | 276 | 0.0217 | -2 | c.939 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29644111 | ATG | A | intron_variant | MODIFIER | HG00423.hp2 HG00438.hp1 HG00438.hp2 others(50): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0005others(9): Show | a0001c0001t0003a0001c0001t0005a0001c0001t0011others(36): Show | a0001c0001t0003g0196a0001c0001t0005g0153a0001c0001t0011g0098others(50): Show | 53 | 276 | 0.1920 | -2 | c.939 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29644149 | GTA | G | intron_variant | MODIFIER | HG01884.hp1 NA18943.hp1 NA19240.hp2 |
a0001 | a0001c0002 | a0001c0002t0001a0001c0002t0002a0001c0002t0013 | a0001c0002t0001g0100a0001c0002t0002g0202a0001c0002t0013g0096 | 3 | 276 | 0.0109 | -2 | c.939 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29651514 | CTT | C | intron_variant | MODIFIER | HG03098.hp1 HG03209.hp1 HG03486.hp2 |
a0001a0004 | a0001c0006a0004c0016 | a0001c0006t0024a0004c0016t0002 | a0001c0006t0024g0023a0004c0016t0002g0049a0004c0016t0002g0050 | 3 | 276 | 0.0109 | -2 | c.939 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29660776 | GTA | G | intron_variant | MODIFIER | HG01361.hp2 HG01934.hp1 HG02559.hp2 |
a0001 | a0001c0001a0001c0015 | a0001c0001t0004a0001c0001t0006a0001c0015t0002 | a0001c0001t0004g0206a0001c0001t0006g0085a0001c0015t0002g0117 | 3 | 276 | 0.0109 | -2 | c.939 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29661599 | AGT | A | intron_variant | MODIFIER | HG00099.hp1 HG00423.hp1 HG00558.hp1 others(108): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0005others(15): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(76): Show | a0001c0001t0001g0080a0001c0001t0001g0086a0001c0001t0001g0155others(108): Show | 111 | 276 | 0.4022 | -2 | c.939 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29662666 | CAA | C | intron_variant | MODIFIER | HG00099.hp1 HG00558.hp1 HG01081.hp1 others(17): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0005others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(14): Show | a0001c0001t0001g0086a0001c0001t0001g0155a0001c0001t0002g0141others(17): Show | 20 | 276 | 0.0725 | -2 | c.939 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29673744 | CTT | C | intron_variant | MODIFIER | HG00140.hp1 HG00140.hp2 HG00323.hp1 others(171): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0005others(20): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(119): Show | a0001c0001t0001g0147a0001c0001t0001g0181a0001c0001t0002g0089others(171): Show | 174 | 276 | 0.6304 | -2 | c.939 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29695793 | TTA | T | intron_variant | MODIFIER | HG02145.hp2 HG02647.hp2 NA19043.hp2 |
a0001a0002 | a0001c0002a0001c0021a0002c0009 | a0001c0002t0003a0001c0021t0024a0002c0009t0040 | a0001c0002t0003g0119a0001c0021t0024g0008a0002c0009t0040g0267 | 3 | 276 | 0.0109 | -2 | c.938 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29699648 | GCT | G | intron_variant | MODIFIER | HG02055.hp2 HG02572.hp2 HG02818.hp1 |
a0001a0002 | a0001c0006a0002c0004a0002c0029 | a0001c0006t0003a0002c0004t0012a0002c0029t0089 | a0001c0006t0003g0024a0002c0004t0012g0275a0002c0029t0089g0268 | 3 | 276 | 0.0109 | -2 | c.938 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29699649 | CTT | C | intron_variant | MODIFIER | HG01123.hp1 HG02257.hp1 HG02486.hp1 others(2): Show |
a0001a0002 | a0001c0006a0001c0007a0001c0012others(2): Show | a0001c0006t0018a0001c0007t0018a0001c0012t0010others(2): Show | a0001c0006t0018g0032a0001c0007t0018g0017a0001c0012t0010g0018others(2): Show | 5 | 276 | 0.0181 | -2 | c.938 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29710795 | CAT | C | intron_variant | MODIFIER | HG02486.hp1 HG02809.hp2 HG02922.hp1 |
a0001 | a0001c0007a0001c0012 | a0001c0007t0018a0001c0007t0030a0001c0012t0010 | a0001c0007t0018g0017a0001c0007t0030g0019a0001c0012t0010g0018 | 3 | 276 | 0.0109 | -2 | c.938 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29710916 | AAT | A | intron_variant | MODIFIER | HG02145.hp2 HG02572.hp2 HG02622.hp1 others(7): Show |
a0001a0002 | a0001c0002a0001c0005a0001c0006others(5): Show | a0001c0002t0013a0001c0002t0049a0001c0005t0013others(7): Show | a0001c0002t0013g0115a0001c0002t0049g0099a0001c0005t0013g0093others(7): Show | 10 | 276 | 0.0362 | -2 | c.938 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29712006 | CAA | C | intron_variant | MODIFIER | HG00099.hp1 HG00323.hp2 HG00438.hp2 others(33): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0005others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(27): Show | a0001c0001t0001g0080a0001c0001t0001g0086a0001c0001t0001g0166others(33): Show | 36 | 276 | 0.1304 | -2 | c.938 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29713300 | TAC | T | intron_variant | MODIFIER | HG01256.hp2 HG01258.hp1 HG01496.hp1 others(18): Show |
a0001a0002 | a0001c0001a0001c0002a0001c0005others(3): Show | a0001c0001t0009a0001c0001t0014a0001c0001t0015others(16): Show | a0001c0001t0009g0209a0001c0001t0014g0126a0001c0001t0015g0059others(18): Show | 21 | 276 | 0.0761 | -2 | c.938 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29713340 | CAG | C | intron_variant | MODIFIER | HG01167.hp2 HG02258.hp1 HG02976.hp1 |
a0001a0002 | a0001c0008a0001c0013a0002c0004 | a0001c0008t0013a0001c0013t0021a0002c0004t0040 | a0001c0008t0013g0092a0001c0013t0021g0030a0002c0004t0040g0274 | 3 | 276 | 0.0109 | -2 | c.938 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29725014 | CTT | C | intron_variant | MODIFIER | HG00099.hp2 HG01081.hp1 HG01175.hp1 others(25): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0005others(7): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(24): Show | a0001c0001t0001g0151a0001c0001t0002g0168a0001c0001t0003g0179others(25): Show | 28 | 276 | 0.1015 | -2 | c.938 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29736261 | CAA | C | intron_variant | MODIFIER | HG00741.hp1 HG01167.hp2 HG01257.hp2 others(23): Show |
a0001a0002a0004 | a0001c0001a0001c0002a0001c0005others(8): Show | a0001c0001t0001a0001c0001t0014a0001c0001t0027others(19): Show | a0001c0001t0001g0147a0001c0001t0014g0157a0001c0001t0014g0158others(23): Show | 26 | 276 | 0.0942 | -2 | c.938 others(21): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29750062 | TAC | T | intron_variant | MODIFIER | HG02486.hp2 HG03486.hp1 HG04184.hp1 |
a0001a0003 | a0001c0001a0001c0002a0003c0023 | a0001c0001t0014a0001c0002t0003a0003c0023t0005 | a0001c0001t0014g0164a0001c0002t0003g0094a0003c0023t0005g0129 | 3 | 276 | 0.0109 | -2 | c.938 others(19): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 5/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29754177 | TAA | T | intron_variant | MODIFIER | HG00323.hp1 HG01070.hp2 HG01081.hp1 others(34): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0005others(10): Show | a0001c0001t0009a0001c0001t0027a0001c0001t0029others(31): Show | a0001c0001t0009g0039a0001c0001t0027g0042a0001c0001t0029g0047others(34): Show | 37 | 276 | 0.1341 | -2 | c.731 others(19): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 4/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29774025 | AGT | A | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(222): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0005others(11): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(120): Show | a0001c0001t0001g0080a0001c0001t0001g0086a0001c0001t0001g0130others(222): Show | 225 | 276 | 0.8152 | -2 | c.303 others(19): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 1/17 | chr12 | TogoVar | ||||||
TMTC1_chr12_29495840_29788942 | 29777615 | CTA | C | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00323.hp2 others(170): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0002a0001c0005others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(91): Show | a0001c0001t0001g0080a0001c0001t0001g0130a0001c0001t0001g0147others(170): Show | 173 | 276 | 0.6268 | -2 | c.302 others(19): Show |
TMTC1 | ENSG00000133687.16 | transcript | ENST00000539277.6 | protein_coding | 1/17 | chr12 | TogoVar | ||||||
TMTC2_chr12_82681906_83139866 | 82684037 | CAA | C | upstream_gene_variant | MODIFIER | HG01928.hp1 HG01978.hp2 HG01993.hp2 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0012a0001c0001t0013a0001c0001t0024others(2): Show | a0001c0001t0012g0005a0001c0001t0013g0004a0001c0001t0013g0009others(3): Show | 6 | 96 | 0.0625 | -2 | c.-35 others(13): Show |
TMTC2 | ENSG00000179104.9 | transcript | ENST00000321196.8 | protein_coding | 2868 | chr12 | TogoVar | ||||||
TMTC2_chr12_82681906_83139866 | 82717218 | CTT | C | intron_variant | MODIFIER | HG01928.hp1 HG01978.hp2 HG02055.hp1 others(11): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0082a0001c0001t0001g0083a0001c0001t0002g0086others(11): Show | 14 | 96 | 0.1458 | -2 | c.83+ others(19): Show |
TMTC2 | ENSG00000179104.9 | transcript | ENST00000321196.8 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
TMTC2_chr12_82681906_83139866 | 82719059 | TTA | T | intron_variant | MODIFIER | HG01975.hp2 HG02976.hp2 |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0019 | a0001c0001t0001g0052a0001c0001t0019g0092 | 2 | 96 | 0.0208 | -2 | c.83+ others(19): Show |
TMTC2 | ENSG00000179104.9 | transcript | ENST00000321196.8 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
TMTC2_chr12_82681906_83139866 | 82727844 | CAA | C | intron_variant | MODIFIER | HG01255.hp2 HG01884.hp2 HG01928.hp2 others(5): Show |
a0001a0002a0004 | a0001c0001a0001c0005a0002c0002others(1): Show | a0001c0001t0002a0001c0001t0003a0001c0001t0030others(5): Show | a0001c0001t0002g0089a0001c0001t0003g0015a0001c0001t0030g0012others(5): Show | 8 | 96 | 0.0833 | -2 | c.83+ others(19): Show |
TMTC2 | ENSG00000179104.9 | transcript | ENST00000321196.8 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
TMTC2_chr12_82681906_83139866 | 82735969 | TCA | T | intron_variant | MODIFIER | HG01071.hp2 HG01109.hp2 HG01243.hp2 others(33): Show |
a0001a0002a0004 | a0001c0001a0001c0005a0002c0002others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(19): Show | a0001c0001t0001g0066a0001c0001t0002g0024a0001c0001t0002g0028others(33): Show | 36 | 96 | 0.3750 | -2 | c.83+ others(19): Show |
TMTC2 | ENSG00000179104.9 | transcript | ENST00000321196.8 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
TMTC2_chr12_82681906_83139866 | 82748858 | CAA | C | intron_variant | MODIFIER | HG02809.hp1 NA19240.hp1 |
a0001 | a0001c0001 | a0001c0001t0010a0001c0001t0031 | a0001c0001t0010g0017a0001c0001t0031g0014 | 2 | 96 | 0.0208 | -2 | c.83+ others(19): Show |
TMTC2 | ENSG00000179104.9 | transcript | ENST00000321196.8 | protein_coding | 1/11 | chr12 | TogoVar | ||||||
TMTC2_chr12_82681906_83139866 | 82761967 | CTT | C | intron_variant | MODIFIER | HG00323.hp2 HG01071.hp1 HG01071.hp2 others(57): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0003a0001c0005others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(33): Show | a0001c0001t0001g0020a0001c0001t0001g0052a0001c0001t0001g0059others(57): Show | 60 | 96 | 0.6250 | -2 | c.83+ others(19): Show |
TMTC2 | ENSG00000179104.9 | transcript | ENST00000321196.8 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | |||||
TMTC2_chr12_82681906_83139866 | 82763010 | GTT | G | intron_variant | MODIFIER | HG01109.hp1 HG01192.hp2 HG02055.hp1 others(11): Show |
a0001a0002 | a0001c0001a0001c0003a0002c0002others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(7): Show | a0001c0001t0001g0082a0001c0001t0001g0083a0001c0001t0002g0086others(11): Show | 14 | 96 | 0.1458 | -2 | c.83+ others(19): Show |
TMTC2 | ENSG00000179104.9 | transcript | ENST00000321196.8 | protein_coding | 1/11 | chr12 | TogoVar | ||||||
TMTC2_chr12_82681906_83139866 | 82764837 | ATT | A | intron_variant | MODIFIER | HG00323.hp2 HG01071.hp2 HG01109.hp2 others(54): Show |
a0001a0002a0003 | a0001c0001a0001c0003a0001c0005others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(31): Show | a0001c0001t0001g0020a0001c0001t0001g0066a0001c0001t0001g0067others(54): Show | 57 | 96 | 0.5938 | -2 | c.83+ others(19): Show |
TMTC2 | ENSG00000179104.9 | transcript | ENST00000321196.8 | protein_coding | 1/11 | INFO_REALIGN_3_PRIME | chr12 | TogoVar |