regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TOGARAM1_chr14_44957190_45079431 | 45045583 | ATG | A | intron_variant | MODIFIER | HG00323.hp2 HG02683.hp2 HG04228.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0104a0001c0001t0001g0147a0001c0001t0001g0159 | 3 | 178 | 0.0169 | -2 | c.415 others(19): Show |
TOGARAM1 | ENSG00000198718.13 | transcript | ENST00000361462.7 | protein_coding | 13/19 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
TOGARAM1_chr14_44957190_45079431 | 45045617 | GTA | G | intron_variant | MODIFIER | HG02055.hp1 HG02109.hp1 HG02647.hp2 |
a0002a0005 | a0002c0003a0005c0008 | a0002c0003t0002a0005c0008t0002 | a0002c0003t0002g0018a0002c0003t0002g0057a0005c0008t0002g0012 | 3 | 178 | 0.0169 | -2 | c.415 others(19): Show |
TOGARAM1 | ENSG00000198718.13 | transcript | ENST00000361462.7 | protein_coding | 13/19 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
TOGARAM1_chr14_44957190_45079431 | 45049057 | CAA | C | intron_variant | MODIFIER | HG01496.hp1 HG01884.hp2 HG01943.hp1 others(15): Show |
a0001a0002a0006 | a0001c0001a0002c0004a0002c0011others(1): Show | a0001c0001t0001a0002c0004t0001a0002c0011t0001others(1): Show | a0001c0001t0001g0073a0001c0001t0001g0080a0001c0001t0001g0100others(15): Show | 18 | 178 | 0.1011 | -2 | c.431 others(21): Show |
TOGARAM1 | ENSG00000198718.13 | transcript | ENST00000361462.7 | protein_coding | 14/19 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
TOGARAM1_chr14_44957190_45079431 | 45053032 | CTT | C | intron_variant | MODIFIER | HG01516.hp2 HG01884.hp1 HG01891.hp1 others(10): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0002a0002c0003t0002a0002c0003t0003others(1): Show | a0001c0001t0002g0068a0001c0001t0002g0069a0001c0001t0002g0070others(10): Show | 13 | 178 | 0.0730 | -2 | c.444 others(19): Show |
TOGARAM1 | ENSG00000198718.13 | transcript | ENST00000361462.7 | protein_coding | 15/19 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
TOGARAM1_chr14_44957190_45079431 | 45053463 | AAT | A | intron_variant | MODIFIER | HG01496.hp1 HG01884.hp2 HG02145.hp2 others(15): Show |
a0002a0006 | a0002c0004a0002c0011a0006c0007 | a0002c0004t0001a0002c0011t0001a0006c0007t0001 | a0002c0004t0001g0161a0002c0004t0001g0162a0002c0004t0001g0166others(15): Show | 18 | 178 | 0.1011 | -2 | c.444 others(19): Show |
TOGARAM1 | ENSG00000198718.13 | transcript | ENST00000361462.7 | protein_coding | 15/19 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
TOGARAM1_chr14_44957190_45079431 | 45071285 | GTT | G | intron_variant | MODIFIER | HG00323.hp1 HG00597.hp2 HG00673.hp2 others(52): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0009a0002c0003others(6): Show | a0001c0001t0001a0001c0001t0002a0001c0009t0002others(8): Show | a0001c0001t0001g0071a0001c0001t0001g0088a0001c0001t0001g0097others(52): Show | 55 | 178 | 0.3090 | -2 | c.497 others(19): Show |
TOGARAM1 | ENSG00000198718.13 | transcript | ENST00000361462.7 | protein_coding | 18/19 | INFO_REALIGN_3_PRIME | chr14 | TogoVar | |||||
TOGARAM1_chr14_44957190_45079431 | 45079350 | GTA | G | downstream_gene_variant | MODIFIER | HG02451.hp2 HG02717.hp2 NA19240.hp2 |
a0004 | a0004c0005 | a0004c0005t0002 | a0004c0005t0002g0004a0004c0005t0002g0029a0004c0005t0002g0058 | 3 | 178 | 0.0169 | -2 | c.*57 others(13): Show |
TOGARAM1 | ENSG00000198718.13 | transcript | ENST00000361462.7 | protein_coding | 4920 | chr14 | TogoVar | ||||||
TOGARAM2_chr2_28976298_29057230 | 28983198 | ATT | A | intron_variant | MODIFIER | HG00597.hp1 HG01123.hp2 HG01167.hp1 others(22): Show |
a0001a0005a0011others(11): Show | a0001c0001a0005c0005a0005c0037others(15): Show | a0001c0001t0001a0005c0005t0001a0005c0037t0001others(15): Show | a0001c0001t0001g0095a0001c0001t0001g0144a0005c0005t0001g0276others(22): Show | 25 | 342 | 0.0731 | -2 | c.-11 others(21): Show |
TOGARAM2 | ENSG00000189350.13 | transcript | ENST00000379558.5 | protein_coding | 1/19 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
TOGARAM2_chr2_28976298_29057230 | 28984089 | CCA | C | intron_variant | MODIFIER | HG02280.hp2 HG02486.hp1 HG02572.hp2 others(1): Show |
a0003a0009a0073 | a0003c0003a0009c0010a0073c0046 | a0003c0003t0002a0009c0010t0002a0073c0046t0002 | a0003c0003t0002g0073a0003c0003t0002g0074a0009c0010t0002g0075others(1): Show | 4 | 342 | 0.0117 | -2 | c.-11 others(21): Show |
TOGARAM2 | ENSG00000189350.13 | transcript | ENST00000379558.5 | protein_coding | 1/19 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
TOGARAM2_chr2_28976298_29057230 | 28990991 | GGT | G | intron_variant | MODIFIER | HG00408.hp1 HG00558.hp2 HG00741.hp1 others(29): Show |
a0001a0002a0003others(15): Show | a0001c0001a0002c0002a0003c0003others(17): Show | a0001c0001t0001a0002c0002t0001a0002c0002t0002others(20): Show | a0001c0001t0001g0108a0001c0001t0001g0110a0001c0001t0001g0137others(29): Show | 32 | 342 | 0.0936 | -2 | c.-11 others(21): Show |
TOGARAM2 | ENSG00000189350.13 | transcript | ENST00000379558.5 | protein_coding | 1/19 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
TOGARAM2_chr2_28976298_29057230 | 28993059 | CAA | C | intron_variant | MODIFIER | HG00099.hp1 HG00408.hp1 HG00408.hp2 others(163): Show |
a0001a0003a0004others(34): Show | a0001c0001a0001c0030a0003c0003others(44): Show | a0001c0001t0001a0001c0001t0002a0001c0030t0001others(47): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0005others(156): Show | 166 | 342 | 0.4854 | -2 | c.-11 others(21): Show |
TOGARAM2 | ENSG00000189350.13 | transcript | ENST00000379558.5 | protein_coding | 1/19 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
TOGARAM2_chr2_28976298_29057230 | 29001856 | CTT | C | intron_variant | MODIFIER | HG00423.hp2 HG00558.hp2 HG02083.hp1 others(7): Show |
a0001a0012a0014 | a0001c0001a0012c0009a0014c0011 | a0001c0001t0001a0012c0009t0001a0014c0011t0001 | a0001c0001t0001g0003a0001c0001t0001g0087a0001c0001t0001g0099others(6): Show | 10 | 342 | 0.0292 | -2 | c.428 others(17): Show |
TOGARAM2 | ENSG00000189350.13 | transcript | ENST00000379558.5 | protein_coding | 4/19 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
TOGARAM2_chr2_28976298_29057230 | 29004647 | AGT | A | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(204): Show |
a0001a0003a0004others(45): Show | a0001c0001a0001c0030a0003c0003others(51): Show | a0001c0001t0001a0001c0001t0002a0001c0030t0001others(57): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0005others(199): Show | 207 | 342 | 0.6053 | -2 | c.830 others(17): Show |
TOGARAM2 | ENSG00000189350.13 | transcript | ENST00000379558.5 | protein_coding | 6/19 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
TOGARAM2_chr2_28976298_29057230 | 29004757 | AGT | A | intron_variant | MODIFIER | HG01123.hp2 HG02717.hp2 HG03098.hp2 others(3): Show |
a0011a0032a0034others(1): Show | a0011c0012a0032c0035a0034c0033others(1): Show | a0011c0012t0001a0032c0035t0001a0034c0033t0001others(1): Show | a0011c0012t0001g0262a0032c0035t0001g0156a0032c0035t0001g0314others(3): Show | 6 | 342 | 0.0175 | -2 | c.830 others(19): Show |
TOGARAM2 | ENSG00000189350.13 | transcript | ENST00000379558.5 | protein_coding | 6/19 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
TOGARAM2_chr2_28976298_29057230 | 29004960 | ATG | A | intron_variant | MODIFIER | HG00423.hp2 HG02083.hp1 HG02132.hp1 others(5): Show |
a0001a0014 | a0001c0001a0014c0011 | a0001c0001t0001a0014c0011t0001 | a0001c0001t0001g0003a0001c0001t0001g0087a0001c0001t0001g0099others(4): Show | 8 | 342 | 0.0234 | -2 | c.830 others(19): Show |
TOGARAM2 | ENSG00000189350.13 | transcript | ENST00000379558.5 | protein_coding | 6/19 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
TOGARAM2_chr2_28976298_29057230 | 29005400 | AGT | A | intron_variant | MODIFIER | HG01106.hp2 HG02895.hp2 HG02897.hp1 |
a0025a0043 | a0025c0026a0043c0091 | a0025c0026t0003a0043c0091t0002 | a0025c0026t0003g0008a0043c0091t0002g0068 | 3 | 342 | 0.0088 | -2 | c.830 others(19): Show |
TOGARAM2 | ENSG00000189350.13 | transcript | ENST00000379558.5 | protein_coding | 6/19 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
TOGARAM2_chr2_28976298_29057230 | 29005782 | CTG | C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(204): Show |
a0001a0003a0004others(45): Show | a0001c0001a0001c0030a0003c0003others(51): Show | a0001c0001t0001a0001c0001t0002a0001c0030t0001others(57): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0005others(199): Show | 207 | 342 | 0.6053 | -2 | c.830 others(19): Show |
TOGARAM2 | ENSG00000189350.13 | transcript | ENST00000379558.5 | protein_coding | 6/19 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
TOGARAM2_chr2_28976298_29057230 | 29005927 | GGA | G | intron_variant | MODIFIER | HG00423.hp1 HG00438.hp2 HG00544.hp2 others(51): Show |
a0005a0011a0012others(12): Show | a0005c0005a0005c0037a0005c0100others(19): Show | a0005c0005t0001a0005c0037t0001a0005c0100t0001others(19): Show | a0005c0005t0001g0001a0005c0005t0001g0145a0005c0005t0001g0274others(49): Show | 54 | 342 | 0.1579 | -2 | c.830 others(19): Show |
TOGARAM2 | ENSG00000189350.13 | transcript | ENST00000379558.5 | protein_coding | 6/19 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
TOGARAM2_chr2_28976298_29057230 | 29006092 | TGG | T | intron_variant | MODIFIER | HG00408.hp1 HG02738.hp1 NA18952.hp1 others(3): Show |
a0003a0014a0021 | a0003c0003a0014c0011a0021c0024 | a0003c0003t0001a0003c0003t0006a0014c0011t0001others(1): Show | a0003c0003t0001g0091a0003c0003t0006g0021a0014c0011t0001g0216others(3): Show | 6 | 342 | 0.0175 | -2 | c.830 others(19): Show |
TOGARAM2 | ENSG00000189350.13 | transcript | ENST00000379558.5 | protein_coding | 6/19 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
TOGARAM2_chr2_28976298_29057230 | 29006346 | GTA | G | intron_variant | MODIFIER | HG01167.hp1 HG01169.hp1 HG01192.hp1 others(13): Show |
a0011a0013a0019others(2): Show | a0011c0012a0013c0014a0019c0027others(3): Show | a0011c0012t0003a0013c0014t0003a0019c0027t0003others(3): Show | a0011c0012t0003g0259a0011c0012t0003g0260a0011c0012t0003g0261others(13): Show | 16 | 342 | 0.0468 | -2 | c.830 others(19): Show |
TOGARAM2 | ENSG00000189350.13 | transcript | ENST00000379558.5 | protein_coding | 6/19 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
TOGARAM2_chr2_28976298_29057230 | 29006389 | CGT | C | intron_variant | MODIFIER | HG00423.hp2 HG02083.hp1 HG02132.hp1 others(5): Show |
a0001a0014 | a0001c0001a0014c0011 | a0001c0001t0001a0014c0011t0001 | a0001c0001t0001g0003a0001c0001t0001g0087a0001c0001t0001g0099others(4): Show | 8 | 342 | 0.0234 | -2 | c.830 others(19): Show |
TOGARAM2 | ENSG00000189350.13 | transcript | ENST00000379558.5 | protein_coding | 6/19 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
TOGARAM2_chr2_28976298_29057230 | 29010028 | GGT | G | intron_variant | MODIFIER | HG02258.hp2 HG03540.hp1 NA18955.hp1 others(1): Show |
a0012a0042a0048others(1): Show | a0012c0009a0042c0092a0048c0083others(1): Show | a0012c0009t0001a0042c0092t0001a0048c0083t0004others(1): Show | a0012c0009t0001g0289a0042c0092t0001g0251a0048c0083t0004g0328others(1): Show | 4 | 342 | 0.0117 | -2 | c.831 others(19): Show |
TOGARAM2 | ENSG00000189350.13 | transcript | ENST00000379558.5 | protein_coding | 6/19 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
TOGARAM2_chr2_28976298_29057230 | 29019177 | CTT | C | intron_variant | MODIFIER | HG00423.hp1 HG00544.hp2 HG00558.hp1 others(69): Show |
a0005a0007a0011others(23): Show | a0005c0005a0005c0037a0005c0100others(29): Show | a0005c0005t0001a0005c0037t0001a0005c0100t0001others(31): Show | a0005c0005t0001g0001a0005c0005t0001g0145a0005c0005t0001g0274others(67): Show | 72 | 342 | 0.2105 | -2 | c.136 others(21): Show |
TOGARAM2 | ENSG00000189350.13 | transcript | ENST00000379558.5 | protein_coding | 10/19 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
TOGARAM2_chr2_28976298_29057230 | 29023777 | TAC | T | intron_variant | MODIFIER | HG00738.hp2 HG01891.hp1 HG01891.hp2 others(13): Show |
a0011a0022a0028others(7): Show | a0011c0071a0022c0018a0028c0023others(8): Show | a0011c0071t0001a0022c0018t0001a0028c0023t0001others(8): Show | a0011c0071t0001g0320a0022c0018t0001g0226a0022c0018t0001g0233others(13): Show | 16 | 342 | 0.0468 | -2 | c.161 others(19): Show |
TOGARAM2 | ENSG00000189350.13 | transcript | ENST00000379558.5 | protein_coding | 12/19 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
TOGARAM2_chr2_28976298_29057230 | 29029264 | TAC | T | intron_variant | MODIFIER | HG01106.hp2 HG01891.hp2 HG02451.hp1 others(12): Show |
a0001a0002a0023others(5): Show | a0001c0001a0002c0002a0023c0096others(5): Show | a0001c0001t0001a0002c0002t0002a0023c0096t0001others(5): Show | a0001c0001t0001g0088a0001c0001t0001g0089a0001c0001t0001g0095others(12): Show | 15 | 342 | 0.0439 | -2 | c.201 others(21): Show |
TOGARAM2 | ENSG00000189350.13 | transcript | ENST00000379558.5 | protein_coding | 14/19 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
TOGARAM2_chr2_28976298_29057230 | 29048678 | CTT | C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(97): Show |
a0001a0004a0005others(26): Show | a0001c0030a0001c0057a0004c0004others(30): Show | a0001c0030t0001a0001c0057t0001a0004c0004t0001others(35): Show | a0001c0030t0001g0117a0001c0057t0001g0158a0004c0004t0001g0007others(94): Show | 100 | 342 | 0.2924 | -2 | c.272 others(21): Show |
TOGARAM2 | ENSG00000189350.13 | transcript | ENST00000379558.5 | protein_coding | 19/19 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
TOGARAM2_chr2_28976298_29057230 | 29048845 | ATT | A | intron_variant | MODIFIER | HG02559.hp2 HG02886.hp2 HG02895.hp1 others(6): Show |
a0008a0022a0028 | a0008c0006a0022c0018a0028c0023 | a0008c0006t0001a0022c0018t0001a0028c0023t0001 | a0008c0006t0001g0175a0008c0006t0001g0214a0022c0018t0001g0226others(6): Show | 9 | 342 | 0.0263 | -2 | c.272 others(21): Show |
TOGARAM2 | ENSG00000189350.13 | transcript | ENST00000379558.5 | protein_coding | 19/19 | INFO_REALIGN_3_PRIME | chr2 | TogoVar | |||||
TOLLIP_chr11_1269371_1314632 | 1285667 | CAG | C | intron_variant | MODIFIER | HG00140.hp1 HG01069.hp2 HG01071.hp1 others(14): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0004a0001c0001t0028a0001c0001t0029others(1): Show | a0001c0001t0004g0016a0001c0001t0004g0258a0001c0001t0004g0311others(13): Show | 17 | 348 | 0.0489 | -2 | c.610 others(17): Show |
TOLLIP | ENSG00000078902.16 | transcript | ENST00000317204.11 | protein_coding | 5/5 | chr11 | TogoVar | ||||||
TOLLIP_chr11_1269371_1314632 | 1294439 | TCA | T | intron_variant | MODIFIER | HG00423.hp2 NA19007.hp1 NA19064.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0074a0001c0001t0001g0176a0001c0001t0001g0177 | 3 | 348 | 0.0086 | -2 | c.183 others(19): Show |
TOLLIP | ENSG00000078902.16 | transcript | ENST00000317204.11 | protein_coding | 2/5 | chr11 | TogoVar | ||||||
TOLLIP_chr11_1269371_1314632 | 1304304 | GAC | G | intron_variant | MODIFIER | HG00733.hp2 HG01433.hp2 HG01993.hp1 others(2): Show |
a0001a0008 | a0001c0001a0008c0013 | a0001c0001t0001a0008c0013t0001 | a0001c0001t0001g0028a0001c0001t0001g0029a0001c0001t0001g0030others(2): Show | 5 | 348 | 0.0144 | -2 | c.33+ others(17): Show |
TOLLIP | ENSG00000078902.16 | transcript | ENST00000317204.11 | protein_coding | 1/5 | chr11 | TogoVar | ||||||
TOLLIP_chr11_1269371_1314632 | 1313174 | CAA | C | upstream_gene_variant | MODIFIER | HG00323.hp1 HG00408.hp1 HG00423.hp1 others(191): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0002a0001c0007others(9): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(28): Show | a0001c0001t0001g0005a0001c0001t0001g0011a0001c0001t0001g0015others(184): Show | 194 | 348 | 0.5575 | -2 | c.-36 others(13): Show |
TOLLIP | ENSG00000078902.16 | transcript | ENST00000317204.11 | protein_coding | 3543 | chr11 | TogoVar | ||||||
TOM1L1_chr17_54895852_54966956 | 54896617 | GAA | G | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(228): Show |
a0001a0004a0005 | a0001c0001a0001c0003a0004c0002others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(7): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(200): Show | 231 | 392 | 0.5893 | -2 | c.-42 others(13): Show |
TOM1L1 | ENSG00000141198.16 | transcript | ENST00000575882.6 | protein_coding | 4234 | chr17 | TogoVar | ||||||
TOM1L1_chr17_54895852_54966956 | 54896976 | CAG | C | upstream_gene_variant | MODIFIER | HG02145.hp2 HG02622.hp1 HG03130.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0004 | a0001c0001t0001g0080a0001c0001t0001g0232a0001c0001t0001g0239others(4): Show | 7 | 392 | 0.0179 | -2 | c.-38 others(13): Show |
TOM1L1 | ENSG00000141198.16 | transcript | ENST00000575882.6 | protein_coding | 3875 | chr17 | TogoVar | ||||||
TOM1L1_chr17_54895852_54966956 | 54896992 | GAA | G | upstream_gene_variant | MODIFIER | HG00639.hp2 HG00673.hp2 HG01243.hp1 others(13): Show |
a0001a0003 | a0001c0001a0003c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0012a0001c0001t0001g0030a0001c0001t0001g0031others(12): Show | 16 | 392 | 0.0408 | -2 | c.-38 others(13): Show |
TOM1L1 | ENSG00000141198.16 | transcript | ENST00000575882.6 | protein_coding | 3859 | chr17 | TogoVar | ||||||
TOM1L1_chr17_54895852_54966956 | 54897556 | CAA | C | upstream_gene_variant | MODIFIER | HG02280.hp2 HG02572.hp2 HG02630.hp1 others(4): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(1): Show | a0001c0001t0001g0038a0001c0001t0001g0041a0001c0001t0002g0254others(4): Show | 7 | 392 | 0.0179 | -2 | c.-33 others(13): Show |
TOM1L1 | ENSG00000141198.16 | transcript | ENST00000575882.6 | protein_coding | 3295 | chr17 | TogoVar | ||||||
TOM1L1_chr17_54895852_54966956 | 54906624 | TTC | T | intron_variant | MODIFIER | HG01168.hp2 HG01346.hp2 NA21309.hp2 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0016a0001c0001t0001g0130 | 3 | 392 | 0.0077 | -2 | c.222 others(19): Show |
TOM1L1 | ENSG00000141198.16 | transcript | ENST00000575882.6 | protein_coding | 3/15 | chr17 | TogoVar | ||||||
TOM1L1_chr17_54895852_54966956 | 54914370 | TAA | T | intron_variant | MODIFIER | HG00140.hp2 HG00408.hp2 HG00438.hp2 others(53): Show |
a0001a0005 | a0001c0001a0005c0006 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(1): Show | a0001c0001t0001g0050a0001c0001t0001g0079a0001c0001t0001g0080others(47): Show | 56 | 392 | 0.1429 | -2 | c.499 others(17): Show |
TOM1L1 | ENSG00000141198.16 | transcript | ENST00000575882.6 | protein_coding | 5/15 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
TOM1L1_chr17_54895852_54966956 | 54934713 | ATT | A | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00280.hp2 others(179): Show |
a0001a0002a0003others(1): Show | a0001c0001a0002c0005a0003c0004others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0031a0001c0001t0001g0079a0001c0001t0001g0080others(160): Show | 182 | 392 | 0.4643 | -2 | c.855 others(19): Show |
TOM1L1 | ENSG00000141198.16 | transcript | ENST00000575882.6 | protein_coding | 8/15 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
TOM1L1_chr17_54895852_54966956 | 54938794 | CTT | C | intron_variant | MODIFIER | HG00140.hp2 HG00408.hp2 HG00438.hp2 others(38): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0001t0003a0001c0003t0001 | a0001c0001t0001g0079a0001c0001t0003g0003a0001c0001t0003g0007others(33): Show | 41 | 392 | 0.1046 | -2 | c.103 others(19): Show |
TOM1L1 | ENSG00000141198.16 | transcript | ENST00000575882.6 | protein_coding | 10/15 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
TOM1L1_chr17_54895852_54966956 | 54939413 | CAG | C | intron_variant | MODIFIER | HG01109.hp2 HG02135.hp1 HG02280.hp1 others(17): Show |
a0001a0003 | a0001c0001a0003c0004 | a0001c0001t0001a0003c0004t0001 | a0001c0001t0001g0031a0001c0001t0001g0080a0001c0001t0001g0106others(17): Show | 20 | 392 | 0.0510 | -2 | c.113 others(19): Show |
TOM1L1 | ENSG00000141198.16 | transcript | ENST00000575882.6 | protein_coding | 11/15 | chr17 | TogoVar | ||||||
TOM1L1_chr17_54895852_54966956 | 54943441 | GGT | G | intron_variant | MODIFIER | HG00673.hp1 HG01175.hp2 HG01358.hp2 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003 | a0001c0001t0001g0095a0001c0001t0001g0097a0001c0001t0001g0098others(10): Show | 13 | 392 | 0.0332 | -2 | c.113 others(21): Show |
TOM1L1 | ENSG00000141198.16 | transcript | ENST00000575882.6 | protein_coding | 11/15 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
TOM1L1_chr17_54895852_54966956 | 54944449 | CAA | C | intron_variant | MODIFIER | HG00140.hp2 HG00408.hp2 HG00438.hp2 others(35): Show |
a0001 | a0001c0001 | a0001c0001t0003 | a0001c0001t0003g0003a0001c0001t0003g0007a0001c0001t0003g0027others(30): Show | 38 | 392 | 0.0969 | -2 | c.113 others(21): Show |
TOM1L1 | ENSG00000141198.16 | transcript | ENST00000575882.6 | protein_coding | 11/15 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
TOM1L1_chr17_54895852_54966956 | 54958730 | CAA | C | intron_variant | MODIFIER | HG01934.hp2 HG02809.hp1 HG04228.hp1 others(3): Show |
a0001 | a0001c0001a0001c0003 | a0001c0001t0001a0001c0003t0001 | a0001c0001t0001g0116a0001c0001t0001g0188a0001c0001t0001g0205others(3): Show | 6 | 392 | 0.0153 | -2 | c.137 others(21): Show |
TOM1L1 | ENSG00000141198.16 | transcript | ENST00000575882.6 | protein_coding | 14/15 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
TOM1L2_chr17_17838511_17977400 | 17843664 | CAT | C | 3_prime_UTR_variant | MODIFIER | HG02109.hp1 HG02129.hp2 HG02486.hp2 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0006a0001c0001t0007a0001c0001t0027others(1): Show | a0001c0001t0006g0001a0001c0001t0006g0230a0001c0001t0006g0231others(10): Show | 15 | 240 | 0.0625 | -2 | c.*39 others(13): Show |
TOM1L2 | ENSG00000175662.18 | transcript | ENST00000379504.8 | protein_coding | 15/15 | 3969 | chr17 | TogoVar | |||||
TOM1L2_chr17_17838511_17977400 | 17852117 | GCT | G | intron_variant | MODIFIER | HG00099.hp2 HG00280.hp2 HG00639.hp1 others(67): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0002a0001c0001t0008a0001c0001t0009others(11): Show | a0001c0001t0002g0041a0001c0001t0002g0074a0001c0001t0002g0093others(67): Show | 70 | 240 | 0.2917 | -2 | c.127 others(21): Show |
TOM1L2 | ENSG00000175662.18 | transcript | ENST00000379504.8 | protein_coding | 12/14 | chr17 | TogoVar | ||||||
TOM1L2_chr17_17838511_17977400 | 17863563 | CTT | C | intron_variant | MODIFIER | HG01070.hp1 HG01257.hp1 HG02109.hp1 others(6): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0005a0001c0001t0007others(1): Show | a0001c0001t0002g0206a0001c0001t0005g0013a0001c0001t0007g0158others(6): Show | 9 | 240 | 0.0375 | -2 | c.108 others(19): Show |
TOM1L2 | ENSG00000175662.18 | transcript | ENST00000379504.8 | protein_coding | 10/14 | chr17 | TogoVar | ||||||
TOM1L2_chr17_17838511_17977400 | 17865742 | CTT | C | intron_variant | MODIFIER | HG01167.hp2 HG01257.hp1 HG02896.hp1 others(2): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0005a0001c0001t0009 | a0001c0001t0002g0206a0001c0001t0002g0209a0001c0001t0002g0225others(2): Show | 5 | 240 | 0.0208 | -2 | c.108 others(19): Show |
TOM1L2 | ENSG00000175662.18 | transcript | ENST00000379504.8 | protein_coding | 10/14 | chr17 | TogoVar | ||||||
TOM1L2_chr17_17838511_17977400 | 17871198 | GTC | G | intron_variant | MODIFIER | HG01891.hp2 HG01934.hp1 HG02109.hp2 others(9): Show |
a0001a0002 | a0001c0001a0002c0004 | a0001c0001t0002a0001c0001t0004a0001c0001t0014others(1): Show | a0001c0001t0002g0129a0001c0001t0004g0126a0001c0001t0004g0127others(9): Show | 12 | 240 | 0.0500 | -2 | c.778 others(19): Show |
TOM1L2 | ENSG00000175662.18 | transcript | ENST00000379504.8 | protein_coding | 7/14 | chr17 | TogoVar | ||||||
TOM1L2_chr17_17838511_17977400 | 17885924 | CAA | C | intron_variant | MODIFIER | HG01433.hp2 HG01891.hp1 HG02109.hp1 others(18): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0006a0001c0001t0007others(3): Show | a0001c0001t0001g0152a0001c0001t0001g0229a0001c0001t0006g0001others(16): Show | 21 | 240 | 0.0875 | -2 | c.367 others(19): Show |
TOM1L2 | ENSG00000175662.18 | transcript | ENST00000379504.8 | protein_coding | 4/14 | chr17 | TogoVar | ||||||
TOM1L2_chr17_17838511_17977400 | 17886172 | ACT | A | intron_variant | MODIFIER | HG01891.hp2 HG01934.hp1 HG02109.hp2 others(14): Show |
a0001a0002 | a0001c0001a0002c0004 | a0001c0001t0002a0001c0001t0004a0001c0001t0014others(2): Show | a0001c0001t0002g0129a0001c0001t0004g0003a0001c0001t0004g0126others(13): Show | 17 | 240 | 0.0708 | -2 | c.367 others(19): Show |
TOM1L2 | ENSG00000175662.18 | transcript | ENST00000379504.8 | protein_coding | 4/14 | chr17 | TogoVar |