view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TRAPPC9_chr8_139722725_140462744 | 140420036 | TTG | T | intron_variant | MODIFIER | HG00642.hp2 HG02451.hp1 HG02723.hp2 others(2): Show |
a0001a0005 | a0001c0001a0005c0016 | a0001c0001t0001a0001c0001t0025a0005c0016t0026 | a0001c0001t0001g0069a0001c0001t0001g0071a0001c0001t0001g0075others(2): Show | 5 | 98 | 0.0510 | -2 | c.886 others(19): Show |
TRAPPC9 | ENSG00000167632.18 | transcript | ENST00000438773.4 | protein_coding | 5/22 | chr8 | TogoVar | |||||||
TRAPPC9_chr8_139722725_140462744 | 140423579 | TAC | T | intron_variant | MODIFIER | HG00140.hp2 HG00639.hp2 HG01192.hp1 others(7): Show |
a0001 | a0001c0001a0001c0003a0001c0004others(5): Show | a0001c0001t0001a0001c0003t0002a0001c0004t0033others(5): Show | a0001c0001t0001g0053a0001c0001t0001g0054a0001c0001t0001g0060others(7): Show | 10 | 98 | 0.1020 | -2 | c.886 others(19): Show |
TRAPPC9 | ENSG00000167632.18 | transcript | ENST00000438773.4 | protein_coding | 5/22 | chr8 | TogoVar | |||||||
TRAPPC9_chr8_139722725_140462744 | 140444035 | CAA | C | intron_variant | MODIFIER | HG01109.hp1 HG01169.hp2 HG02451.hp1 others(3): Show |
a0001a0005 | a0001c0001a0005c0016 | a0001c0001t0001a0001c0001t0004a0001c0001t0009others(2): Show | a0001c0001t0001g0069a0001c0001t0001g0075a0001c0001t0004g0078others(3): Show | 6 | 98 | 0.0612 | -2 | c.585 others(19): Show |
TRAPPC9 | ENSG00000167632.18 | transcript | ENST00000438773.4 | protein_coding | 2/22 | chr8 | TogoVar | |||||||
TRAPPC9_chr8_139722725_140462744 | 140446293 | CAA | C | intron_variant | MODIFIER | HG00735.hp2 HG00738.hp1 HG01070.hp1 others(8): Show |
a0001 | a0001c0004a0001c0012a0001c0013 | a0001c0004t0001a0001c0004t0004a0001c0004t0010others(3): Show | a0001c0004t0001g0085a0001c0004t0001g0086a0001c0004t0001g0088others(8): Show | 11 | 98 | 0.1122 | -2 | c.584 others(19): Show |
TRAPPC9 | ENSG00000167632.18 | transcript | ENST00000438773.4 | protein_coding | 2/22 | chr8 | TogoVar | |||||||
TRAPPC9_chr8_139722725_140462744 | 140448145 | CAA | C | intron_variant | MODIFIER | HG00735.hp2 HG00738.hp1 HG01070.hp1 others(12): Show |
a0001a0006 | a0001c0004a0001c0005a0001c0012others(2): Show | a0001c0004t0001a0001c0004t0004a0001c0004t0010others(6): Show | a0001c0004t0001g0085a0001c0004t0001g0086a0001c0004t0001g0088others(12): Show | 15 | 98 | 0.1531 | -2 | c.584 others(19): Show |
TRAPPC9 | ENSG00000167632.18 | transcript | ENST00000438773.4 | protein_coding | 2/22 | chr8 | TogoVar | |||||||
TRAPPC9_chr8_139722725_140462744 | 140454659 | AAC | A | intron_variant | MODIFIER | HG00735.hp2 HG00738.hp1 HG01070.hp1 others(11): Show |
a0001a0006 | a0001c0004a0001c0012a0001c0013others(1): Show | a0001c0004t0001a0001c0004t0004a0001c0004t0010others(5): Show | a0001c0004t0001g0085a0001c0004t0001g0086a0001c0004t0001g0088others(11): Show | 14 | 98 | 0.1429 | -2 | c.-11 others(19): Show |
TRAPPC9 | ENSG00000167632.18 | transcript | ENST00000438773.4 | protein_coding | 1/22 | chr8 | TogoVar | |||||||
TRARG1_chr17_1274662_1305978 | 1275402 | GAA | G | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00280.hp2 others(127): Show |
a0001a0003a0004others(3): Show | a0001c0001a0003c0003a0004c0004others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(30): Show | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0006others(103): Show | 130 | 402 | 0.3234 | -2 | c.-45 others(13): Show |
TRARG1 | ENSG00000184811.4 | transcript | ENST00000333813.4 | protein_coding | 4259 | chr17 | TogoVar | |||||||
TRARG1_chr17_1274662_1305978 | 1275446 | CTG | C | upstream_gene_variant | MODIFIER | HG02055.hp1 HG02615.hp2 HG02717.hp2 others(10): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(4): Show | a0001c0001t0001g0290a0001c0001t0003g0009a0001c0001t0003g0031others(7): Show | 13 | 402 | 0.0323 | -2 | c.-45 others(13): Show |
TRARG1 | ENSG00000184811.4 | transcript | ENST00000333813.4 | protein_coding | 4215 | chr17 | TogoVar | |||||||
TRARG1_chr17_1274662_1305978 | 1275497 | AGT | A | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00280.hp2 others(146): Show |
a0001a0003a0004others(3): Show | a0001c0001a0003c0003a0004c0004others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(34): Show | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0006others(120): Show | 149 | 402 | 0.3707 | -2 | c.-45 others(13): Show |
TRARG1 | ENSG00000184811.4 | transcript | ENST00000333813.4 | protein_coding | 4164 | chr17 | TogoVar | |||||||
TRARG1_chr17_1274662_1305978 | 1275602 | TGG | T | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00280.hp2 others(124): Show |
a0001a0003a0004others(3): Show | a0001c0001a0003c0003a0004c0004others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(30): Show | a0001c0001t0001g0001a0001c0001t0001g0004a0001c0001t0001g0006others(102): Show | 127 | 402 | 0.3159 | -2 | c.-43 others(13): Show |
TRARG1 | ENSG00000184811.4 | transcript | ENST00000333813.4 | protein_coding | 4059 | chr17 | TogoVar | |||||||
TRARG1_chr17_1274662_1305978 | 1275643 | CTG | C | upstream_gene_variant | MODIFIER | HG02486.hp2 HG02886.hp1 HG03486.hp1 others(1): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0003a0001c0001t0008a0001c0001t0041others(1): Show | a0001c0001t0003g0246a0001c0001t0008g0284a0001c0001t0041g0285others(1): Show | 4 | 402 | 0.0100 | -2 | c.-43 others(13): Show |
TRARG1 | ENSG00000184811.4 | transcript | ENST00000333813.4 | protein_coding | 4018 | chr17 | TogoVar | |||||||
TRARG1_chr17_1274662_1305978 | 1275683 | TGA | T | upstream_gene_variant | MODIFIER | HG00408.hp1 HG00408.hp2 HG00621.hp2 others(15): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0004a0001c0001t0018others(5): Show | a0001c0001t0001g0138a0001c0001t0001g0159a0001c0001t0001g0161others(12): Show | 18 | 402 | 0.0448 | -2 | c.-43 others(13): Show |
TRARG1 | ENSG00000184811.4 | transcript | ENST00000333813.4 | protein_coding | 3978 | chr17 | TogoVar | |||||||
TRARG1_chr17_1274662_1305978 | 1275748 | TGA | T | upstream_gene_variant | MODIFIER | HG02486.hp2 HG02886.hp1 HG03486.hp1 others(1): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0003a0001c0001t0008a0001c0001t0041others(1): Show | a0001c0001t0003g0246a0001c0001t0008g0284a0001c0001t0041g0285others(1): Show | 4 | 402 | 0.0100 | -2 | c.-42 others(13): Show |
TRARG1 | ENSG00000184811.4 | transcript | ENST00000333813.4 | protein_coding | 3913 | chr17 | TogoVar | |||||||
TRARG1_chr17_1274662_1305978 | 1275750 | AGT | A | upstream_gene_variant | MODIFIER | HG01109.hp2 HG01243.hp1 HG01884.hp1 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0005a0001c0001t0015a0001c0001t0046others(1): Show | a0001c0001t0005g0039a0001c0001t0005g0041a0001c0001t0005g0075others(8): Show | 13 | 402 | 0.0323 | -2 | c.-42 others(13): Show |
TRARG1 | ENSG00000184811.4 | transcript | ENST00000333813.4 | protein_coding | 3911 | chr17 | TogoVar | |||||||
TRARG1_chr17_1274662_1305978 | 1275800 | TGA | T | upstream_gene_variant | MODIFIER | HG01891.hp2 HG02486.hp1 HG02965.hp1 others(1): Show |
a0001a0010 | a0001c0001a0010c0011 | a0001c0001t0003a0001c0001t0005a0010c0011t0031 | a0001c0001t0003g0116a0001c0001t0003g0117a0001c0001t0005g0209others(1): Show | 4 | 402 | 0.0100 | -2 | c.-42 others(13): Show |
TRARG1 | ENSG00000184811.4 | transcript | ENST00000333813.4 | protein_coding | 3861 | chr17 | TogoVar | |||||||
TRARG1_chr17_1274662_1305978 | 1275810 | AGT | A | upstream_gene_variant | MODIFIER | HG02055.hp2 HG06807.hp1 HG06807.hp2 |
a0001 | a0001c0001 | a0001c0001t0032a0001c0001t0056 | a0001c0001t0032g0114a0001c0001t0032g0115a0001c0001t0056g0196 | 3 | 402 | 0.0075 | -2 | c.-41 others(13): Show |
TRARG1 | ENSG00000184811.4 | transcript | ENST00000333813.4 | protein_coding | 3851 | chr17 | TogoVar | |||||||
TRARG1_chr17_1274662_1305978 | 1275816 | TGA | T | upstream_gene_variant | MODIFIER | HG02055.hp1 HG02615.hp2 HG02647.hp1 others(8): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0003a0001c0001t0004a0001c0001t0043others(2): Show | a0001c0001t0003g0009a0001c0001t0003g0031a0001c0001t0003g0119others(5): Show | 11 | 402 | 0.0274 | -2 | c.-41 others(13): Show |
TRARG1 | ENSG00000184811.4 | transcript | ENST00000333813.4 | protein_coding | 3845 | chr17 | TogoVar | |||||||
TRARG1_chr17_1274662_1305978 | 1275879 | AGT | A | upstream_gene_variant | MODIFIER | HG00438.hp1 HG00597.hp1 HG00642.hp1 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(3): Show | a0001c0001t0001g0088a0001c0001t0001g0092a0001c0001t0001g0093others(9): Show | 15 | 402 | 0.0373 | -2 | c.-41 others(13): Show |
TRARG1 | ENSG00000184811.4 | transcript | ENST00000333813.4 | protein_coding | 3782 | chr17 | TogoVar | |||||||
TRARG1_chr17_1274662_1305978 | 1279587 | GCA | G | upstream_gene_variant | MODIFIER | HG00408.hp1 HG00423.hp2 HG00544.hp1 others(69): Show |
a0001a0003a0004others(4): Show | a0001c0001a0003c0003a0004c0004others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(29): Show | a0001c0001t0001g0049a0001c0001t0001g0112a0001c0001t0001g0121others(59): Show | 72 | 402 | 0.1791 | -2 | c.-41 others(11): Show |
TRARG1 | ENSG00000184811.4 | transcript | ENST00000333813.4 | protein_coding | 74 | chr17 | TogoVar | |||||||
TRARG1_chr17_1274662_1305978 | 1281984 | ATG | A | intron_variant | MODIFIER | HG00609.hp2 HG01123.hp2 HG01256.hp2 others(51): Show |
a0001a0003a0004others(1): Show | a0001c0001a0003c0003a0004c0004others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(19): Show | a0001c0001t0001g0259a0001c0001t0002g0044a0001c0001t0002g0045others(38): Show | 54 | 402 | 0.1343 | -2 | c.387 others(19): Show |
TRARG1 | ENSG00000184811.4 | transcript | ENST00000333813.4 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
TRARG1_chr17_1274662_1305978 | 1282035 | TAC | T | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00423.hp2 others(39): Show |
a0001a0003a0004 | a0001c0001a0003c0003a0004c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(6): Show | a0001c0001t0001g0082a0001c0001t0001g0088a0001c0001t0001g0090others(33): Show | 42 | 402 | 0.1045 | -2 | c.387 others(19): Show |
TRARG1 | ENSG00000184811.4 | transcript | ENST00000333813.4 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
TRARG1_chr17_1274662_1305978 | 1282191 | CGT | C | intron_variant | MODIFIER | HG02145.hp2 HG02258.hp2 HG02886.hp1 others(5): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0005a0001c0001t0008a0001c0001t0016others(2): Show | a0001c0001t0005g0204a0001c0001t0008g0282a0001c0001t0008g0291others(5): Show | 8 | 402 | 0.0199 | -2 | c.387 others(19): Show |
TRARG1 | ENSG00000184811.4 | transcript | ENST00000333813.4 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
TRARG1_chr17_1274662_1305978 | 1282217 | TAC | T | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp1 HG02132.hp1 others(12): Show |
a0001a0003a0004 | a0001c0001a0003c0003a0004c0004 | a0001c0001t0002a0001c0001t0004a0001c0001t0005others(6): Show | a0001c0001t0002g0099a0001c0001t0004g0253a0001c0001t0005g0204others(9): Show | 15 | 402 | 0.0373 | -2 | c.387 others(19): Show |
TRARG1 | ENSG00000184811.4 | transcript | ENST00000333813.4 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
TRARG1_chr17_1274662_1305978 | 1282260 | ATG | A | intron_variant | MODIFIER | HG01433.hp1 HG02109.hp1 HG02257.hp1 others(10): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0001a0001c0001t0004a0001c0001t0008others(4): Show | a0001c0001t0001g0290a0001c0001t0004g0280a0001c0001t0008g0046others(9): Show | 13 | 402 | 0.0323 | -2 | c.387 others(19): Show |
TRARG1 | ENSG00000184811.4 | transcript | ENST00000333813.4 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
TRARG1_chr17_1274662_1305978 | 1282265 | CAT | C | intron_variant | MODIFIER | HG00741.hp1 HG02258.hp2 HG02886.hp1 others(5): Show |
a0001a0003 | a0001c0001a0003c0003 | a0001c0001t0008a0001c0001t0016a0001c0001t0028others(3): Show | a0001c0001t0008g0282a0001c0001t0016g0103a0001c0001t0016g0292others(5): Show | 8 | 402 | 0.0199 | -2 | c.387 others(19): Show |
TRARG1 | ENSG00000184811.4 | transcript | ENST00000333813.4 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
TRARG1_chr17_1274662_1305978 | 1294468 | CTT | C | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp2 HG00323.hp1 others(116): Show |
a0001a0002a0003others(3): Show | a0001c0001a0002c0002a0003c0003others(3): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0004others(23): Show | a0001c0001t0001g0082a0001c0001t0001g0090a0001c0001t0001g0092others(91): Show | 119 | 402 | 0.2960 | -2 | c.388 others(19): Show |
TRARG1 | ENSG00000184811.4 | transcript | ENST00000333813.4 | protein_coding | 1/2 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
TRARG1_chr17_1274662_1305978 | 1296968 | ACT | A | intron_variant | MODIFIER | HG01243.hp1 HG02559.hp1 HG03139.hp1 |
a0001 | a0001c0001 | a0001c0001t0015 | a0001c0001t0015g0040a0001c0001t0015g0200 | 3 | 402 | 0.0075 | -2 | c.521 others(19): Show |
TRARG1 | ENSG00000184811.4 | transcript | ENST00000333813.4 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
TRARG1_chr17_1274662_1305978 | 1297592 | CTT | C | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp2 HG00280.hp2 others(87): Show |
a0001a0002a0004others(3): Show | a0001c0001a0002c0002a0004c0004others(3): Show | a0001c0001t0002a0001c0001t0006a0001c0001t0010others(16): Show | a0001c0001t0002g0002a0001c0001t0002g0012a0001c0001t0002g0013others(66): Show | 90 | 402 | 0.2239 | -2 | c.521 others(17): Show |
TRARG1 | ENSG00000184811.4 | transcript | ENST00000333813.4 | protein_coding | 2/2 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | ||||||
TRARG1_chr17_1274662_1305978 | 1300449 | TAC | T | 3_prime_UTR_variant | MODIFIER | HG00621.hp2 HG01109.hp2 HG01884.hp1 others(20): Show |
a0001a0010 | a0001c0001a0010c0011 | a0001c0001t0005a0001c0001t0010a0001c0001t0029others(5): Show | a0001c0001t0005g0039a0001c0001t0005g0041a0001c0001t0005g0075others(17): Show | 23 | 402 | 0.0572 | -2 | c.*22 others(13): Show |
TRARG1 | ENSG00000184811.4 | transcript | ENST00000333813.4 | protein_coding | 3/3 | 2208 | INFO_REALIGN_3_PRIME | chr17 | TogoVar | |||||
TRAT1_chr3_108817786_108860005 | 108819718 | CCT | C | upstream_gene_variant | MODIFIER | HG00323.hp2 HG00741.hp2 HG01109.hp1 others(27): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0001a0001c0001t0002a0001c0001t0010others(1): Show | a0001c0001t0001g0003a0001c0001t0001g0177a0001c0001t0001g0179others(25): Show | 30 | 340 | 0.0882 | -2 | c.-32 others(13): Show |
TRAT1 | ENSG00000163519.14 | transcript | ENST00000295756.11 | protein_coding | 3067 | chr3 | TogoVar | |||||||
TRAT1_chr3_108817786_108860005 | 108823084 | CAT | C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00323.hp2 others(159): Show |
a0001a0002a0006others(1): Show | a0001c0001a0002c0002a0006c0006others(1): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(8): Show | a0001c0001t0001g0009a0001c0001t0001g0020a0001c0001t0001g0024others(137): Show | 162 | 340 | 0.4765 | -2 | c.7+1 others(13): Show |
TRAT1 | ENSG00000163519.14 | transcript | ENST00000295756.11 | protein_coding | 1/5 | chr3 | TogoVar | |||||||
TRAT1_chr3_108817786_108860005 | 108827374 | GTA | G | intron_variant | MODIFIER | HG02055.hp1 HG02486.hp1 HG02922.hp1 others(5): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0002a0001c0001t0004a0001c0001t0006others(1): Show | a0001c0001t0002g0128a0001c0001t0004g0119a0001c0001t0006g0127others(3): Show | 8 | 340 | 0.0235 | -2 | c.8-3 others(15): Show |
TRAT1 | ENSG00000163519.14 | transcript | ENST00000295756.11 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
TRAT1_chr3_108817786_108860005 | 108827384 | ATG | A | intron_variant | MODIFIER | HG01106.hp2 HG01109.hp2 HG01243.hp2 others(20): Show |
a0001a0003a0004 | a0001c0001a0003c0003a0004c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(5): Show | a0001c0001t0001g0040a0001c0001t0001g0041a0001c0001t0001g0042others(19): Show | 23 | 340 | 0.0677 | -2 | c.8-3 others(15): Show |
TRAT1 | ENSG00000163519.14 | transcript | ENST00000295756.11 | protein_coding | 1/5 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
TRAT1_chr3_108817786_108860005 | 108833799 | TAC | T | intron_variant | MODIFIER | HG00609.hp1 HG00741.hp1 HG01106.hp2 others(12): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0004a0001c0001t0006others(1): Show | a0001c0001t0002g0088a0001c0001t0002g0169a0001c0001t0004g0114others(11): Show | 15 | 340 | 0.0441 | -2 | c.118 others(19): Show |
TRAT1 | ENSG00000163519.14 | transcript | ENST00000295756.11 | protein_coding | 2/5 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
TRAT1_chr3_108817786_108860005 | 108838363 | TAG | T | intron_variant | MODIFIER | HG01106.hp2 HG01891.hp2 HG02109.hp2 others(1): Show |
a0001a0004 | a0001c0001a0004c0004 | a0001c0001t0007a0004c0004t0008 | a0001c0001t0007g0222a0001c0001t0007g0223a0001c0001t0007g0224others(1): Show | 4 | 340 | 0.0118 | -2 | c.119 others(17): Show |
TRAT1 | ENSG00000163519.14 | transcript | ENST00000295756.11 | protein_coding | 2/5 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
TRAT1_chr3_108817786_108860005 | 108851628 | TAA | T | intron_variant | MODIFIER | HG00099.hp2 HG00323.hp2 HG00408.hp1 others(210): Show |
a0001a0003a0004others(2): Show | a0001c0001a0003c0003a0004c0004others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(9): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0005others(181): Show | 213 | 340 | 0.6265 | -2 | c.304 others(19): Show |
TRAT1 | ENSG00000163519.14 | transcript | ENST00000295756.11 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
TRAT1_chr3_108817786_108860005 | 108852397 | GCA | G | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00323.hp1 others(320): Show |
a0001a0002a0003others(5): Show | a0001c0001a0002c0002a0003c0003others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(14): Show | a0001c0001t0001g0003a0001c0001t0001g0004a0001c0001t0001g0005others(280): Show | 323 | 340 | 0.9500 | -2 | c.304 others(19): Show |
TRAT1 | ENSG00000163519.14 | transcript | ENST00000295756.11 | protein_coding | 5/5 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
TRDMT1_chr10_17132336_17206672 | 17134962 | GGA | G | downstream_gene_variant | MODIFIER | HG01070.hp1 HG01071.hp2 HG02055.hp1 others(5): Show |
a0001a0002a0003 | a0001c0004a0002c0002a0002c0007others(1): Show | a0001c0004t0019a0002c0002t0002a0002c0007t0115others(2): Show | a0001c0004t0019g0285a0001c0004t0019g0286a0001c0004t0019g0287others(5): Show | 8 | 378 | 0.0212 | -2 | c.*14 others(15): Show |
TRDMT1 | ENSG00000107614.22 | transcript | ENST00000377799.8 | protein_coding | 2373 | chr10 | TogoVar | |||||||
TRDMT1_chr10_17132336_17206672 | 17140037 | CTT | C | 3_prime_UTR_variant | MODIFIER | HG00642.hp1 HG02559.hp2 HG02622.hp2 others(7): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0012a0001c0001t0057a0001c0001t0123others(2): Show | a0001c0001t0012g0297a0001c0001t0012g0298a0001c0001t0012g0300others(7): Show | 10 | 378 | 0.0265 | -2 | c.*90 others(13): Show |
TRDMT1 | ENSG00000107614.22 | transcript | ENST00000377799.8 | protein_coding | 11/11 | 9001 | chr10 | TogoVar | ||||||
TRDMT1_chr10_17132336_17206672 | 17140214 | ATT | A | 3_prime_UTR_variant | MODIFIER | HG01070.hp2 HG01884.hp1 HG02280.hp1 others(6): Show |
a0001a0002 | a0001c0001a0002c0003 | a0001c0001t0024a0001c0001t0052a0001c0001t0059others(4): Show | a0001c0001t0024g0067a0001c0001t0024g0068a0001c0001t0052g0066others(6): Show | 9 | 378 | 0.0238 | -2 | c.*88 others(13): Show |
TRDMT1 | ENSG00000107614.22 | transcript | ENST00000377799.8 | protein_coding | 11/11 | 8824 | chr10 | TogoVar | ||||||
TRDMT1_chr10_17132336_17206672 | 17155009 | CAG | C | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00280.hp1 others(148): Show |
a0002a0003 | a0002c0002a0002c0003a0002c0005others(1): Show | a0002c0002t0002a0002c0002t0003a0002c0002t0008others(44): Show | a0002c0002t0002g0006a0002c0002t0002g0007a0002c0002t0002g0014others(127): Show | 151 | 378 | 0.3995 | -2 | c.888 others(17): Show |
TRDMT1 | ENSG00000107614.22 | transcript | ENST00000377799.8 | protein_coding | 8/10 | chr10 | TogoVar | |||||||
TRDMT1_chr10_17132336_17206672 | 17171110 | GAT | G | intron_variant | MODIFIER | HG00280.hp1 HG00609.hp2 HG00621.hp2 others(36): Show |
a0002 | a0002c0003 | a0002c0003t0004a0002c0003t0009a0002c0003t0022others(9): Show | a0002c0003t0004g0004a0002c0003t0004g0005a0002c0003t0004g0079others(31): Show | 39 | 378 | 0.1032 | -2 | c.175 others(19): Show |
TRDMT1 | ENSG00000107614.22 | transcript | ENST00000377799.8 | protein_coding | 2/10 | chr10 | TogoVar | |||||||
TRDMT1_chr10_17132336_17206672 | 17173772 | CTT | C | intron_variant | MODIFIER | HG00140.hp1 HG00408.hp2 HG00423.hp2 others(136): Show |
a0001a0002a0003 | a0001c0001a0001c0004a0002c0002others(4): Show | a0001c0001t0005a0001c0001t0006a0001c0001t0011others(69): Show | a0001c0001t0005g0020a0001c0001t0005g0193a0001c0001t0005g0198others(128): Show | 139 | 378 | 0.3677 | -2 | c.174 others(17): Show |
TRDMT1 | ENSG00000107614.22 | transcript | ENST00000377799.8 | protein_coding | 2/10 | chr10 | TogoVar | |||||||
TRDMT1_chr10_17132336_17206672 | 17178677 | GAA | G | intron_variant | MODIFIER | HG00280.hp1 HG00597.hp1 HG00609.hp2 others(48): Show |
a0001a0002 | a0001c0001a0001c0004a0002c0003others(1): Show | a0001c0001t0061a0001c0004t0019a0002c0003t0004others(13): Show | a0001c0001t0061g0308a0001c0004t0019g0285a0001c0004t0019g0286others(41): Show | 51 | 378 | 0.1349 | -2 | c.65- others(17): Show |
TRDMT1 | ENSG00000107614.22 | transcript | ENST00000377799.8 | protein_coding | 1/10 | chr10 | TogoVar | |||||||
TRDMT1_chr10_17132336_17206672 | 17179754 | TAA | T | intron_variant | MODIFIER | HG00408.hp2 HG01069.hp1 HG01071.hp1 others(17): Show |
a0001a0002 | a0001c0001a0002c0002a0002c0005 | a0001c0001t0014a0001c0001t0070a0001c0001t0071others(14): Show | a0001c0001t0014g0323a0001c0001t0070g0271a0001c0001t0071g0270others(16): Show | 20 | 378 | 0.0529 | -2 | c.65- others(17): Show |
TRDMT1 | ENSG00000107614.22 | transcript | ENST00000377799.8 | protein_coding | 1/10 | chr10 | TogoVar | |||||||
TRDMT1_chr10_17132336_17206672 | 17194949 | CAA | C | intron_variant | MODIFIER | HG00280.hp1 HG00597.hp1 HG00609.hp2 others(34): Show |
a0002 | a0002c0003 | a0002c0003t0004a0002c0003t0009a0002c0003t0022others(6): Show | a0002c0003t0004g0004a0002c0003t0004g0005a0002c0003t0004g0012others(27): Show | 37 | 378 | 0.0979 | -2 | c.64+ others(17): Show |
TRDMT1 | ENSG00000107614.22 | transcript | ENST00000377799.8 | protein_coding | 1/10 | chr10 | TogoVar | |||||||
TRDN_chr6_123211339_123641950 | 123216722 | CAT | C | 3_prime_UTR_variant | MODIFIER | HG04115.hp2 HG04184.hp1 |
a0019a0031 | a0019c0028a0031c0022 | a0019c0028t0013a0031c0022t0013 | a0019c0028t0013g0129a0031c0022t0013g0094 | 2 | 152 | 0.0132 | -2 | c.*18 others(13): Show |
TRDN | ENSG00000186439.15 | transcript | ENST00000334268.9 | protein_coding | 41/41 | 1877 | chr6 | TogoVar | ||||||
TRDN_chr6_123211339_123641950 | 123227743 | TTG | T | intron_variant | MODIFIER | HG00099.hp1 HG00621.hp1 HG00639.hp1 others(36): Show |
a0001a0002a0003others(16): Show | a0001c0002a0002c0004a0002c0005others(18): Show | a0001c0002t0002a0002c0004t0002a0002c0004t0020others(25): Show | a0001c0002t0002g0038a0001c0002t0002g0121a0002c0004t0002g0050others(36): Show | 39 | 152 | 0.2566 | -2 | c.197 others(21): Show |
TRDN | ENSG00000186439.15 | transcript | ENST00000334268.9 | protein_coding | 38/40 | chr6 | TogoVar | |||||||
TRDN_chr6_123211339_123641950 | 123227749 | GTT | G | intron_variant | MODIFIER | HG00099.hp1 HG00621.hp1 HG00639.hp1 others(36): Show |
a0001a0002a0003others(16): Show | a0001c0002a0002c0004a0002c0005others(18): Show | a0001c0002t0002a0002c0004t0002a0002c0004t0020others(25): Show | a0001c0002t0002g0038a0001c0002t0002g0121a0002c0004t0002g0050others(36): Show | 39 | 152 | 0.2566 | -2 | c.197 others(21): Show |
TRDN | ENSG00000186439.15 | transcript | ENST00000334268.9 | protein_coding | 38/40 | chr6 | TogoVar | |||||||
TRDN_chr6_123211339_123641950 | 123266185 | ATT | A | intron_variant | MODIFIER | HG03130.hp1 HG03942.hp1 |
a0001a0010 | a0001c0002a0010c0012 | a0001c0002t0004a0010c0012t0002 | a0001c0002t0004g0011a0010c0012t0002g0117 | 2 | 152 | 0.0132 | -2 | c.178 others(19): Show |
TRDN | ENSG00000186439.15 | transcript | ENST00000334268.9 | protein_coding | 32/40 | chr6 | TogoVar |