view | regionname | pos | ref | alt | annotation | impact | samples | ahapids | chapids | thapids | thapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TRMT5_chr14_60966441_60986079 | 60971876 | GGA | G | 3_prime_UTR_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(218): Show |
a0001a0002a0004others(2): Show | a0001c0001a0002c0003a0004c0006others(2): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(9): Show | a0001c0001t0001g0002 a0001c0001t0001g0012 a0001c0001t0001g0016 others(28): Show |
221 | 392 | 0.5638 | -2 | c.*32 others(13): Show |
TRMT5 | ENSG00000126814.7 | transcript | ENST00000261249.7 | protein_coding | 5/5 | 3231 | chr14 | TogoVar | ||||||
TRMT61A_chr14_103524196_103542073 | 103539897 | ATT | A | downstream_gene_variant | MODIFIER | HG01081.hp2 HG01099.hp2 HG01891.hp2 others(17): Show |
a0001a0005 | a0001c0001a0001c0003a0005c0012 | a0001c0001t0002a0001c0001t0004a0001c0001t0012others(5): Show | a0001c0001t0002g0003 a0001c0001t0004g0004 a0001c0001t0012g0005 others(6): Show |
20 | 438 | 0.0457 | -2 | c.*50 others(13): Show |
TRMT61A | ENSG00000166166.13 | transcript | ENST00000389749.9 | protein_coding | 2825 | chr14 | TogoVar | |||||||
TRMT61B_chr2_28844821_28875309 | 28846722 | TAC | T | downstream_gene_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00140.hp2 others(25): Show |
a0001 | a0001c0001a0001c0002 | a0001c0001t0001a0001c0002t0001 | a0001c0001t0001g0001 a0001c0001t0001g0043 a0001c0001t0001g0045 others(25): Show |
28 | 360 | 0.0778 | -2 | c.*34 others(13): Show |
TRMT61B | ENSG00000171103.11 | transcript | ENST00000306108.10 | protein_coding | 3098 | chr2 | TogoVar | |||||||
TRMT61B_chr2_28844821_28875309 | 28852312 | CAA | C | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00673.hp2 others(34): Show |
a0001 | a0001c0001a0001c0002a0001c0007 | a0001c0001t0001a0001c0002t0001a0001c0007t0001 | a0001c0001t0001g0013 a0001c0001t0001g0014 a0001c0001t0001g0021 others(29): Show |
37 | 360 | 0.1028 | -2 | c.108 others(17): Show |
TRMT61B | ENSG00000171103.11 | transcript | ENST00000306108.10 | protein_coding | 4/6 | chr2 | TogoVar | |||||||
TRMT61B_chr2_28844821_28875309 | 28854738 | CAA | C | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00423.hp1 others(73): Show |
a0001a0004 | a0001c0001a0001c0003a0004c0011 | a0001c0001t0001a0001c0003t0001a0004c0011t0001 | a0001c0001t0001g0003 a0001c0001t0001g0005 a0001c0001t0001g0012 others(63): Show |
76 | 360 | 0.2111 | -2 | c.994 others(19): Show |
TRMT61B | ENSG00000171103.11 | transcript | ENST00000306108.10 | protein_coding | 3/6 | chr2 | TogoVar | |||||||
TRMT61B_chr2_28844821_28875309 | 28856173 | TAA | T | intron_variant | MODIFIER | HG01070.hp1 HG01255.hp1 HG02015.hp2 others(1): Show |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0247 a0001c0002t0001g0248 a0001c0002t0001g0249 others(1): Show |
4 | 360 | 0.0111 | -2 | c.994 others(19): Show |
TRMT61B | ENSG00000171103.11 | transcript | ENST00000306108.10 | protein_coding | 3/6 | chr2 | TogoVar | |||||||
TRMT61B_chr2_28844821_28875309 | 28860272 | CAA | C | intron_variant | MODIFIER | HG01496.hp2 HG02615.hp2 HG02723.hp2 others(4): Show |
a0001a0002a0005 | a0001c0002a0001c0005a0002c0004others(1): Show | a0001c0002t0001a0001c0005t0001a0002c0004t0001others(1): Show | a0001c0002t0001g0211 a0001c0002t0001g0212 a0001c0002t0001g0213 others(4): Show |
7 | 360 | 0.0194 | -2 | c.993 others(17): Show |
TRMT61B | ENSG00000171103.11 | transcript | ENST00000306108.10 | protein_coding | 3/6 | chr2 | TogoVar | |||||||
TRMT61B_chr2_28844821_28875309 | 28862864 | TTG | T | intron_variant | MODIFIER | HG00140.hp2 HG00544.hp2 HG00621.hp2 others(49): Show |
a0001a0004a0006 | a0001c0001a0001c0002a0004c0011others(1): Show | a0001c0001t0001a0001c0002t0001a0004c0011t0001others(1): Show | a0001c0001t0001g0012 a0001c0001t0001g0014 a0001c0001t0001g0033 others(46): Show |
52 | 360 | 0.1444 | -2 | c.803 others(19): Show |
TRMT61B | ENSG00000171103.11 | transcript | ENST00000306108.10 | protein_coding | 2/6 | chr2 | TogoVar | |||||||
TRMT61B_chr2_28844821_28875309 | 28865672 | CTT | C | intron_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00280.hp2 others(109): Show |
a0001a0002a0005others(2): Show | a0001c0001a0001c0002a0001c0005others(5): Show | a0001c0001t0001a0001c0002t0001a0001c0005t0001others(5): Show | a0001c0001t0001g0020 a0001c0001t0001g0021 a0001c0001t0001g0022 others(96): Show |
112 | 360 | 0.3111 | -2 | c.700 others(17): Show |
TRMT61B | ENSG00000171103.11 | transcript | ENST00000306108.10 | protein_coding | 1/6 | chr2 | TogoVar | |||||||
TRMT6_chr20_5932228_5955533 | 5936550 | GAA | G | downstream_gene_variant | MODIFIER | HG00323.hp1 HG00408.hp1 HG00544.hp1 others(78): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0003a0001c0006others(3): Show | a0001c0001t0003a0001c0001t0024a0001c0001t0025others(7): Show | a0001c0001t0003g0002 a0001c0001t0003g0011 a0001c0001t0003g0036 others(16): Show |
81 | 428 | 0.1893 | -2 | c.*19 others(13): Show |
TRMT6 | ENSG00000089195.15 | transcript | ENST00000203001.7 | protein_coding | 677 | chr20 | TogoVar | |||||||
TRMT6_chr20_5932228_5955533 | 5939486 | GAA | G | intron_variant | MODIFIER | HG00323.hp1 HG00408.hp1 HG00544.hp1 others(75): Show |
a0001a0003a0005 | a0001c0001a0001c0003a0001c0006others(2): Show | a0001c0001t0003a0001c0001t0024a0001c0001t0025others(6): Show | a0001c0001t0003g0002 a0001c0001t0003g0011 a0001c0001t0003g0036 others(14): Show |
78 | 428 | 0.1822 | -2 | c.130 others(19): Show |
TRMT6 | ENSG00000089195.15 | transcript | ENST00000203001.7 | protein_coding | 10/10 | chr20 | TogoVar | |||||||
TRMT6_chr20_5932228_5955533 | 5940967 | ACT | A | intron_variant | MODIFIER | HG02602.hp2 HG02970.hp1 HG03017.hp2 others(3): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0009a0002c0002t0014 | a0001c0001t0009g0022 a0001c0001t0009g0064 a0002c0002t0014g0031 |
6 | 428 | 0.0140 | -2 | c.130 others(17): Show |
TRMT6 | ENSG00000089195.15 | transcript | ENST00000203001.7 | protein_coding | 10/10 | chr20 | TogoVar | |||||||
TRMT6_chr20_5932228_5955533 | 5952386 | ACT | A | upstream_gene_variant | MODIFIER | HG02015.hp2 HG02622.hp2 HG02970.hp1 others(7): Show |
a0001a0002 | a0001c0001a0002c0002 | a0001c0001t0006a0002c0002t0007a0002c0002t0014 | a0001c0001t0006g0032 a0002c0002t0007g0019 a0002c0002t0007g0041 others(3): Show |
10 | 428 | 0.0234 | -2 | c.-19 others(13): Show |
TRMT6 | ENSG00000089195.15 | transcript | ENST00000203001.7 | protein_coding | 1854 | chr20 | TogoVar | |||||||
TRMT6_chr20_5932228_5955533 | 5953438 | GGT | G | upstream_gene_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00280.hp1 others(175): Show |
a0001a0002a0003others(1): Show | a0001c0001a0001c0003a0001c0005others(3): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0004others(13): Show | a0001c0001t0001g0001 a0001c0001t0001g0015 a0001c0001t0001g0017 others(50): Show |
178 | 428 | 0.4159 | -2 | c.-30 others(13): Show |
TRMT6 | ENSG00000089195.15 | transcript | ENST00000203001.7 | protein_coding | 2906 | chr20 | TogoVar | |||||||
TRMT9B_chr8_12940673_13034777 | 12942147 | CAA | C | upstream_gene_variant | MODIFIER | HG00140.hp1 HG00741.hp2 HG01099.hp1 others(13): Show |
a0001a0002a0003 | a0001c0001a0001c0012a0002c0002others(1): Show | a0001c0001t0140a0001c0012t0008a0001c0012t0158others(7): Show | a0001c0001t0140g0355 a0001c0012t0008g0368 a0001c0012t0158g0367 others(13): Show |
16 | 384 | 0.0417 | -2 | c.-40 others(13): Show |
TRMT9B | ENSG00000250305.9 | transcript | ENST00000524591.7 | protein_coding | 3525 | chr8 | TogoVar | |||||||
TRMT9B_chr8_12940673_13034777 | 12944696 | GTA | G | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp2 HG00280.hp1 others(47): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0003a0001c0013others(8): Show | a0001c0001t0001a0001c0001t0013a0001c0001t0127others(30): Show | a0001c0001t0001g0305 a0001c0001t0013g0319 a0001c0001t0127g0330 others(46): Show |
50 | 384 | 0.1302 | -2 | c.-14 others(13): Show |
TRMT9B | ENSG00000250305.9 | transcript | ENST00000524591.7 | protein_coding | 976 | chr8 | TogoVar | |||||||
TRMT9B_chr8_12940673_13034777 | 12961717 | AAG | A | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp2 others(54): Show |
a0001a0002a0003others(6): Show | a0001c0001a0001c0003a0002c0002others(11): Show | a0001c0001t0001a0001c0001t0013a0001c0001t0050others(37): Show | a0001c0001t0001g0305 a0001c0001t0013g0319 a0001c0001t0050g0328 others(53): Show |
57 | 384 | 0.1484 | -2 | c.-20 others(23): Show |
TRMT9B | ENSG00000250305.9 | transcript | ENST00000524591.7 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
TRMT9B_chr8_12940673_13034777 | 12976368 | CTT | C | intron_variant | MODIFIER | HG00140.hp1 HG00323.hp2 HG00544.hp1 others(154): Show |
a0001a0002a0003others(5): Show | a0001c0001a0001c0003a0001c0012others(17): Show | a0001c0001t0001a0001c0001t0007a0001c0001t0008others(79): Show | a0001c0001t0001g0003 a0001c0001t0001g0024 a0001c0001t0001g0025 others(149): Show |
157 | 384 | 0.4089 | -2 | c.-19 others(23): Show |
TRMT9B | ENSG00000250305.9 | transcript | ENST00000524591.7 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
TRMT9B_chr8_12940673_13034777 | 12984952 | CAT | C | intron_variant | MODIFIER | HG00733.hp2 HG02109.hp1 HG02486.hp2 others(25): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0003a0001c0013others(9): Show | a0001c0001t0153a0001c0003t0167a0001c0013t0101others(20): Show | a0001c0001t0153g0053 a0001c0003t0167g0370 a0001c0013t0101g0185 others(24): Show |
28 | 384 | 0.0729 | -2 | c.-19 others(21): Show |
TRMT9B | ENSG00000250305.9 | transcript | ENST00000524591.7 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
TRMT9B_chr8_12940673_13034777 | 12987692 | CAA | C | intron_variant | MODIFIER | HG00140.hp1 HG00323.hp2 HG00544.hp1 others(152): Show |
a0001a0002a0003others(3): Show | a0001c0001a0001c0003a0001c0012others(12): Show | a0001c0001t0001a0001c0001t0007a0001c0001t0008others(76): Show | a0001c0001t0001g0003 a0001c0001t0001g0024 a0001c0001t0001g0025 others(148): Show |
155 | 384 | 0.4037 | -2 | c.-19 others(21): Show |
TRMT9B | ENSG00000250305.9 | transcript | ENST00000524591.7 | protein_coding | 1/4 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
TRMT9B_chr8_12940673_13034777 | 12998439 | CAT | C | intron_variant | MODIFIER | HG03130.hp1 HG03486.hp1 NA19043.hp2 |
a0003 | a0003c0004a0003c0009 | a0003c0004t0180a0003c0009t0018 | a0003c0004t0180g0038 a0003c0009t0018g0126 a0003c0009t0018g0127 |
3 | 384 | 0.0078 | -2 | c.-2+ others(17): Show |
TRMT9B | ENSG00000250305.9 | transcript | ENST00000524591.7 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
TRMT9B_chr8_12940673_13034777 | 13001738 | CAT | C | intron_variant | MODIFIER | HG00140.hp1 HG00323.hp2 HG00544.hp1 others(81): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0003a0001c0029others(4): Show | a0001c0001t0001a0001c0001t0007a0001c0001t0008others(36): Show | a0001c0001t0001g0003 a0001c0001t0001g0024 a0001c0001t0001g0025 others(78): Show |
84 | 384 | 0.2188 | -2 | c.-1- others(17): Show |
TRMT9B | ENSG00000250305.9 | transcript | ENST00000524591.7 | protein_coding | 2/4 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
TRMT9B_chr8_12940673_13034777 | 13018839 | GAA | G | intron_variant | MODIFIER | HG01981.hp2 HG03490.hp1 NA20805.hp1 |
a0004 | a0004c0005 | a0004c0005t0022 | a0004c0005t0022g0148 a0004c0005t0022g0149 a0004c0005t0022g0150 |
3 | 384 | 0.0078 | -2 | c.329 others(19): Show |
TRMT9B | ENSG00000250305.9 | transcript | ENST00000524591.7 | protein_coding | 4/4 | INFO_REALIGN_3_PRIME | chr8 | TogoVar | ||||||
TRMU_chr22_46330714_46362340 | 46331099 | AAG | A | upstream_gene_variant | MODIFIER | HG01070.hp1 HG01106.hp2 HG01358.hp1 others(6): Show |
a0002 | a0002c0002a0002c0012 | a0002c0002t0001a0002c0002t0002a0002c0012t0003 | a0002c0002t0001g0067 a0002c0002t0001g0069 a0002c0002t0002g0014 others(4): Show |
9 | 304 | 0.0296 | -2 | c.-46 others(13): Show |
TRMU | ENSG00000100416.15 | transcript | ENST00000645190.1 | protein_coding | 4614 | chr22 | TogoVar | |||||||
TRMU_chr22_46330714_46362340 | 46333731 | AGG | A | upstream_gene_variant | MODIFIER | HG00639.hp1 HG01261.hp1 HG01433.hp1 others(3): Show |
a0001 | a0001c0001a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0004t0001 | a0001c0001t0001g0040 a0001c0001t0001g0041 a0001c0001t0002g0020 others(2): Show |
6 | 304 | 0.0197 | -2 | c.-20 others(13): Show |
TRMU | ENSG00000100416.15 | transcript | ENST00000645190.1 | protein_coding | 1982 | chr22 | TogoVar | |||||||
TRMU_chr22_46330714_46362340 | 46333826 | CAA | C | upstream_gene_variant | MODIFIER | HG01070.hp1 HG01106.hp2 HG01358.hp1 others(6): Show |
a0002 | a0002c0002a0002c0018 | a0002c0002t0001a0002c0002t0002a0002c0018t0001 | a0002c0002t0001g0067 a0002c0002t0001g0069 a0002c0002t0002g0014 others(4): Show |
9 | 304 | 0.0296 | -2 | c.-19 others(13): Show |
TRMU | ENSG00000100416.15 | transcript | ENST00000645190.1 | protein_coding | 1887 | chr22 | TogoVar | |||||||
TRMU_chr22_46330714_46362340 | 46341704 | CTA | C | intron_variant | MODIFIER | HG01433.hp2 HG03139.hp1 HG03486.hp1 others(1): Show |
a0005 | a0005c0006 | a0005c0006t0004a0005c0006t0009 | a0005c0006t0004g0023 a0005c0006t0004g0039 a0005c0006t0004g0064 others(1): Show |
4 | 304 | 0.0132 | -2 | c.249 others(19): Show |
TRMU | ENSG00000100416.15 | transcript | ENST00000645190.1 | protein_coding | 2/10 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||||||
TRMU_chr22_46330714_46362340 | 46351459 | GTC | G | intron_variant | MODIFIER | HG01243.hp1 HG01884.hp1 HG02451.hp1 others(14): Show |
a0001a0002a0003 | a0001c0010a0002c0012a0003c0003 | a0001c0010t0003a0002c0012t0003a0003c0003t0003others(1): Show | a0001c0010t0003g0048 a0001c0010t0003g0065 a0002c0012t0003g0042 others(10): Show |
17 | 304 | 0.0559 | -2 | c.652 others(17): Show |
TRMU | ENSG00000100416.15 | transcript | ENST00000645190.1 | protein_coding | 5/10 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | ||||||
TRMU_chr22_46330714_46362340 | 46357271 | CAG | C | 3_prime_UTR_variant | MODIFIER | HG02486.hp2 HG02809.hp1 NA19043.hp1 |
a0006 | a0006c0009 | a0006c0009t0006 | a0006c0009t0006g0022 a0006c0009t0006g0047 |
3 | 304 | 0.0099 | -2 | c.*26 others(11): Show |
TRMU | ENSG00000100416.15 | transcript | ENST00000645190.1 | protein_coding | 11/11 | 268 | INFO_REALIGN_3_PRIME | chr22 | TogoVar | |||||
TRMU_chr22_46330714_46362340 | 46361442 | CAG | C | downstream_gene_variant | MODIFIER | HG01433.hp2 HG03139.hp1 HG03486.hp1 |
a0005 | a0005c0006 | a0005c0006t0004a0005c0006t0009 | a0005c0006t0004g0023 a0005c0006t0004g0064 a0005c0006t0009g0023 |
3 | 304 | 0.0099 | -2 | c.*44 others(13): Show |
TRMU | ENSG00000100416.15 | transcript | ENST00000645190.1 | protein_coding | 4103 | chr22 | TogoVar | |||||||
TRNAU1AP_chr1_28548085_28583545 | 28550616 | TAA | T | upstream_gene_variant | MODIFIER | HG01099.hp2 HG01106.hp1 HG01167.hp1 others(8): Show |
a0001a0002 | a0001c0001a0002c0005 | a0001c0001t0002a0002c0005t0002 | a0001c0001t0002g0163 a0001c0001t0002g0165 a0001c0001t0002g0168 others(8): Show |
11 | 296 | 0.0372 | -2 | c.-24 others(13): Show |
TRNAU1AP | ENSG00000180098.9 | transcript | ENST00000373830.4 | protein_coding | 2468 | chr1 | TogoVar | |||||||
TRNAU1AP_chr1_28548085_28583545 | 28552292 | ATG | A | upstream_gene_variant | MODIFIER | HG01952.hp1 HG02080.hp2 HG02258.hp1 others(2): Show |
a0001a0003 | a0001c0001a0001c0004a0003c0007 | a0001c0001t0001a0001c0004t0001a0003c0007t0002 | a0001c0001t0001g0024 a0001c0001t0001g0085 a0001c0004t0001g0155 others(2): Show |
5 | 296 | 0.0169 | -2 | c.-81 others(11): Show |
TRNAU1AP | ENSG00000180098.9 | transcript | ENST00000373830.4 | protein_coding | 792 | chr1 | TogoVar | |||||||
TRNAU1AP_chr1_28548085_28583545 | 28554833 | ACT | A | intron_variant | MODIFIER | HG02970.hp2 HG03453.hp2 HG03471.hp1 |
a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0062 a0001c0001t0001g0063 a0001c0001t0001g0064 |
3 | 296 | 0.0101 | -2 | c.125 others(19): Show |
TRNAU1AP | ENSG00000180098.9 | transcript | ENST00000373830.4 | protein_coding | 2/8 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
TRNAU1AP_chr1_28548085_28583545 | 28558560 | ATT | A | intron_variant | MODIFIER | HG00639.hp2 HG01257.hp1 HG01884.hp1 others(3): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002 | a0001c0001t0001g0048 a0001c0001t0002g0157 a0001c0001t0002g0163 others(3): Show |
6 | 296 | 0.0203 | -2 | c.126 others(19): Show |
TRNAU1AP | ENSG00000180098.9 | transcript | ENST00000373830.4 | protein_coding | 2/8 | INFO_REALIGN_3_PRIME | chr1 | TogoVar | ||||||
TRNP1_chr1_26988692_27005886 | 26989897 | CCT | C | upstream_gene_variant | MODIFIER | HG00099.hp2 HG00140.hp1 HG00140.hp2 others(203): Show |
a0001a0002 | a0001c0001a0001c0006a0001c0007others(2): Show | a0001c0001t0001a0001c0001t0003a0001c0001t0006others(10): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0004 others(36): Show |
206 | 288 | 0.7153 | -2 | c.-38 others(13): Show |
TRNP1 | ENSG00000253368.4 | transcript | ENST00000522111.3 | protein_coding | 3794 | chr1 | TogoVar | |||||||
TRNP1_chr1_26988692_27005886 | 26998228 | AAG | A | intron_variant | MODIFIER | HG00099.hp1 HG00280.hp1 HG00323.hp1 others(30): Show |
a0001 | a0001c0001a0001c0004a0001c0005 | a0001c0001t0001a0001c0004t0001a0001c0005t0005 | a0001c0001t0001g0003 a0001c0001t0001g0013 a0001c0001t0001g0015 others(7): Show |
33 | 288 | 0.1146 | -2 | c.*14 others(21): Show |
TRNP1 | ENSG00000253368.4 | transcript | ENST00000522111.3 | protein_coding | 1/1 | chr1 | TogoVar | |||||||
TRNP1_chr1_26988692_27005886 | 27001328 | TGC | T | downstream_gene_variant | MODIFIER | HG01106.hp2 HG02559.hp2 HG02630.hp2 others(10): Show |
a0001 | a0001c0001 | a0001c0001t0002a0001c0001t0004a0001c0001t0007others(1): Show | a0001c0001t0002g0008 a0001c0001t0002g0019 a0001c0001t0002g0029 others(6): Show |
13 | 288 | 0.0451 | -2 | c.*16 others(13): Show |
TRNP1 | ENSG00000253368.4 | transcript | ENST00000522111.3 | protein_coding | 443 | chr1 | TogoVar | |||||||
TRNP1_chr1_26988692_27005886 | 27004198 | ATT | A | downstream_gene_variant | MODIFIER | HG01256.hp2 HG01258.hp2 HG01516.hp1 |
a0001 | a0001c0002 | a0001c0002t0001 | a0001c0002t0001g0007 | 3 | 288 | 0.0104 | -2 | c.*44 others(13): Show |
TRNP1 | ENSG00000253368.4 | transcript | ENST00000522111.3 | protein_coding | 3313 | chr1 | TogoVar | |||||||
TRNT1_chr3_3121940_3154023 | 3124780 | CCT | C | upstream_gene_variant | MODIFIER | HG00140.hp2 HG00280.hp2 HG00408.hp2 others(89): Show |
a0001a0002a0003 | a0001c0001a0001c0002a0001c0004others(4): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(11): Show | a0001c0001t0001g0001 a0001c0001t0001g0003 a0001c0001t0001g0007 others(56): Show |
92 | 402 | 0.2289 | -2 | c.-22 others(13): Show |
TRNT1 | ENSG00000072756.18 | transcript | ENST00000251607.11 | protein_coding | 2159 | chr3 | TogoVar | |||||||
TRNT1_chr3_3121940_3154023 | 3125639 | AAG | A | upstream_gene_variant | MODIFIER | HG00280.hp1 HG00408.hp1 HG00544.hp1 others(65): Show |
a0001a0002 | a0001c0001a0001c0002a0002c0003 | a0001c0001t0001a0001c0001t0002a0001c0001t0005others(8): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(37): Show |
68 | 402 | 0.1692 | -2 | c.-13 others(13): Show |
TRNT1 | ENSG00000072756.18 | transcript | ENST00000251607.11 | protein_coding | 1300 | chr3 | TogoVar | |||||||
TRNT1_chr3_3121940_3154023 | 3132519 | CTG | C | intron_variant | MODIFIER | HG00099.hp1 HG00140.hp1 HG00323.hp1 others(115): Show |
a0001a0003 | a0001c0001a0003c0009 | a0001c0001t0002a0001c0001t0005a0001c0001t0007others(5): Show | a0001c0001t0002g0005 a0001c0001t0002g0009 a0001c0001t0002g0014 others(73): Show |
118 | 402 | 0.2935 | -2 | c.148 others(19): Show |
TRNT1 | ENSG00000072756.18 | transcript | ENST00000251607.11 | protein_coding | 2/7 | chr3 | TogoVar | |||||||
TRNT1_chr3_3121940_3154023 | 3132743 | AAC | A | intron_variant | MODIFIER | HG00642.hp2 HG01884.hp2 HG01891.hp1 others(4): Show |
a0001a0005 | a0001c0004a0005c0014 | a0001c0004t0008a0001c0004t0016a0005c0014t0016 | a0001c0004t0008g0047 a0001c0004t0008g0048 a0001c0004t0008g0049 others(4): Show |
7 | 402 | 0.0174 | -2 | c.148 others(19): Show |
TRNT1 | ENSG00000072756.18 | transcript | ENST00000251607.11 | protein_coding | 2/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
TRNT1_chr3_3121940_3154023 | 3134200 | GCC | G | intron_variant | MODIFIER | HG00609.hp2 HG02165.hp2 NA18940.hp2 others(5): Show |
a0001 | a0001c0001 | a0001c0001t0006 | a0001c0001t0006g0013 a0001c0001t0006g0132 a0001c0001t0006g0211 |
8 | 402 | 0.0199 | -2 | c.149 others(19): Show |
TRNT1 | ENSG00000072756.18 | transcript | ENST00000251607.11 | protein_coding | 2/7 | chr3 | TogoVar | |||||||
TRNT1_chr3_3121940_3154023 | 3141310 | CAT | C | intron_variant | MODIFIER | HG01106.hp2 HG01175.hp2 HG02922.hp2 others(1): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0017 | a0001c0001t0001g0059 a0001c0001t0001g0060 a0001c0001t0017g0147 others(1): Show |
4 | 402 | 0.0100 | -2 | c.481 others(17): Show |
TRNT1 | ENSG00000072756.18 | transcript | ENST00000251607.11 | protein_coding | 4/7 | chr3 | TogoVar | |||||||
TRNT1_chr3_3121940_3154023 | 3144555 | ATT | A | intron_variant | MODIFIER | HG01884.hp2 HG01891.hp1 HG02257.hp2 others(2): Show |
a0001 | a0001c0004 | a0001c0004t0008 | a0001c0004t0008g0047 a0001c0004t0008g0048 a0001c0004t0008g0049 others(2): Show |
5 | 402 | 0.0124 | -2 | c.482 others(15): Show |
TRNT1 | ENSG00000072756.18 | transcript | ENST00000251607.11 | protein_coding | 4/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
TRNT1_chr3_3121940_3154023 | 3145502 | CAA | C | intron_variant | MODIFIER | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(285): Show |
a0001a0002a0003others(2): Show | a0001c0001a0001c0002a0001c0010others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(20): Show | a0001c0001t0001g0001 a0001c0001t0001g0002 a0001c0001t0001g0003 others(147): Show |
288 | 402 | 0.7164 | -2 | c.608 others(17): Show |
TRNT1 | ENSG00000072756.18 | transcript | ENST00000251607.11 | protein_coding | 5/7 | INFO_REALIGN_3_PRIME | chr3 | TogoVar | ||||||
TROAP_chr12_49318255_49336731 | 49325366 | TAA | T | intron_variant | MODIFIER | HG01167.hp2 HG01169.hp2 HG02145.hp2 others(5): Show |
a0001 | a0001c0004 | a0001c0004t0003 | a0001c0004t0003g0013 a0001c0004t0003g0027 a0001c0004t0003g0066 others(1): Show |
8 | 292 | 0.0274 | -2 | c.338 others(17): Show |
TROAP | ENSG00000135451.13 | transcript | ENST00000257909.8 | protein_coding | 3/14 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
TROAP_chr12_49318255_49336731 | 49328214 | CTT | C | intron_variant | MODIFIER | HG00323.hp1 HG00642.hp1 HG01167.hp1 others(23): Show |
a0001a0004 | a0001c0002a0001c0003a0004c0008 | a0001c0002t0001a0001c0002t0004a0001c0003t0001others(2): Show | a0001c0002t0001g0004 a0001c0002t0001g0017 a0001c0002t0001g0022 others(8): Show |
26 | 292 | 0.0890 | -2 | c.892 others(17): Show |
TROAP | ENSG00000135451.13 | transcript | ENST00000257909.8 | protein_coding | 8/14 | INFO_REALIGN_3_PRIME | chr12 | TogoVar | ||||||
TRO_chrX_54915824_54936431 | 54919273 | GAC | G | upstream_gene_variant | MODIFIER | NA19002.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 310 | 0.0032 | -2 | c.-16 others(13): Show |
TRO | ENSG00000067445.22 | transcript | ENST00000173898.12 | protein_coding | 1550 | chrX | TogoVar | |||||||
TRO_chrX_54915824_54936431 | 54919288 | ATG | A | upstream_gene_variant | MODIFIER | NA19002.hp2 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0001 | 1 | 310 | 0.0032 | -2 | c.-16 others(13): Show |
TRO | ENSG00000067445.22 | transcript | ENST00000173898.12 | protein_coding | 1535 | chrX | TogoVar |