Joint Open Genome and Omics Platform (JoGo)

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regionname	pos	ref	alt	annotation	impact	samples	ahapids	chapids	thapids	thapids	ac	an	af	len	hgvs_c	genename	geneid	featuretype	featureid	transcript_biotype	rank	distance	status	chr	external
PCDHA5_chr5_140816613_141017347	140948856	ATATTACT others(13): Show ATATTACTTCGGGTTTACTTT	A A	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0204 a0001c0001t0001g0204	1	220	0.0046	-20	c.235 others(41): Show c.2353-30092_2353-30073delTATTACTTCGGGTTTACTTT	PCDHA5	ENSG00000204965.9	transcript	ENST00000529859.2	protein_coding	1/3			chr5	TogoVar
PCDHA5_chr5_140816613_141017347	140993462	TCACACAC others(13): Show TCACACACACACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG02602.hp2 HG02602.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0047 a0002c0002t0002g0047	1	220	0.0046	-20	c.250 others(41): Show c.2500+10927_2500+10946delACACACACACACACACACAC	PCDHA5	ENSG00000204965.9	transcript	ENST00000529859.2	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA6_chr5_140822960_141017347	140838075	ATAGTGTG others(13): Show ATAGTGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG00280.hp1 HG00280.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0125 a0001c0001t0001g0125	1	236	0.0042	-20	c.239 others(39): Show c.2394+7591_2394+7610delTAGTGTGTGTGTGTGTGTGT	PCDHA6	ENSG00000081842.18	transcript	ENST00000529310.6	protein_coding	1/3			chr5	TogoVar
PCDHA6_chr5_140822960_141017347	140924896	AAAAAAAA others(13): Show AAAAAAAAAATAAAATAAAAT	A A	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02897.hp1 HG02970.hp1 others(2): Show HG02896.hp2 HG02897.hp1 HG02970.hp1 HG03195.hp2 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0014 a0001c0001 a0001c0014	a0001c0001t0001 a0001c0001t0009 a0001c0014t0001 a0001c0001t0001 a0001c0001t0009 a0001c0014t0001	a0001c0001t0001g0052 a0001c0001t0001g0074 a0001c0001t0001g0075 others(2): Show a0001c0001t0001g0052 a0001c0001t0001g0074 a0001c0001t0001g0075 a0001c0001t0009g0114 a0001c0014t0001g0022	5	236	0.0212	-20	c.239 others(41): Show c.2395-54048_2395-54029delAAAAATAAAATAAAATAAAA	PCDHA6	ENSG00000081842.18	transcript	ENST00000529310.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA6_chr5_140822960_141017347	140941194	TCTTTCTT others(13): Show TCTTTCTTCCTTTCTTTCTTC	T T	intron_variant intron_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0039 a0001c0001t0007g0039	1	236	0.0042	-20	c.239 others(41): Show c.2395-37747_2395-37728delCCTTTCTTTCTTCCTTTCTT	PCDHA6	ENSG00000081842.18	transcript	ENST00000529310.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA6_chr5_140822960_141017347	140941202	CCTTTCTT others(13): Show CCTTTCTTTCTTCCTTTCTTT	C C	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02559.hp2 HG02615.hp2 others(1): Show HG02280.hp2 HG02559.hp2 HG02615.hp2 HG03516.hp2	a0002 a0003 a0011 a0002 a0003 a0011	a0002c0004 a0002c0022 a0003c0003 others(1): Show a0002c0004 a0002c0022 a0003c0003 a0011c0011	a0002c0004t0002 a0002c0022t0005 a0003c0003t0007 others(1): Show a0002c0004t0002 a0002c0022t0005 a0003c0003t0007 a0011c0011t0005	a0002c0004t0002g0009 a0002c0022t0005g0132 a0003c0003t0007g0019 others(1): Show a0002c0004t0002g0009 a0002c0022t0005g0132 a0003c0003t0007g0019 a0011c0011t0005g0008	4	236	0.0170	-20	c.239 others(41): Show c.2395-37735_2395-37716delCCTTTCTTTCTTTCTTTCTT	PCDHA6	ENSG00000081842.18	transcript	ENST00000529310.6	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA6_chr5_140822960_141017347	140948856	ATATTACT others(13): Show ATATTACTTCGGGTTTACTTT	A A	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0012 a0003c0003t0001g0012	1	236	0.0042	-20	c.239 others(41): Show c.2395-30092_2395-30073delTATTACTTCGGGTTTACTTT	PCDHA6	ENSG00000081842.18	transcript	ENST00000529310.6	protein_coding	1/3			chr5	TogoVar
PCDHA6_chr5_140822960_141017347	140993462	TCACACAC others(13): Show TCACACACACACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG02602.hp2 HG02602.hp2	a0010 a0010	a0010c0019 a0010c0019	a0010c0019t0001 a0010c0019t0001	a0010c0019t0001g0197 a0010c0019t0001g0197	1	236	0.0042	-20	c.254 others(41): Show c.2542+10927_2542+10946delACACACACACACACACACAC	PCDHA6	ENSG00000081842.18	transcript	ENST00000529310.6	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA7_chr5_140829269_141017347	140838075	ATAGTGTG others(13): Show ATAGTGTGTGTGTGTGTGTGT	A A	intron_variant intron_variant	MODIFIER	HG00280.hp2 HG00280.hp2	a0009 a0009	a0009c0025 a0009c0025	a0009c0025t0001 a0009c0025t0001	a0009c0025t0001g0124 a0009c0025t0001g0124	1	248	0.0040	-20	c.235 others(39): Show c.2355+1338_2355+1357delTAGTGTGTGTGTGTGTGTGT	PCDHA7	ENSG00000204963.6	transcript	ENST00000525929.2	protein_coding	1/3			chr5	TogoVar
PCDHA7_chr5_140829269_141017347	140924896	AAAAAAAA others(13): Show AAAAAAAAAATAAAATAAAAT	A A	intron_variant intron_variant	MODIFIER	HG02896.hp1 HG02897.hp2 HG02970.hp2 others(2): Show HG02896.hp1 HG02897.hp2 HG02970.hp2 HG03195.hp2 NA19043.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0009 a0002c0001t0001 a0002c0001t0009	a0002c0001t0001g0009 a0002c0001t0001g0021 a0002c0001t0001g0049 others(2): Show a0002c0001t0001g0009 a0002c0001t0001g0021 a0002c0001t0001g0049 a0002c0001t0001g0050 a0002c0001t0009g0092	5	248	0.0202	-20	c.235 others(41): Show c.2356-54048_2356-54029delAAAAATAAAATAAAATAAAA	PCDHA7	ENSG00000204963.6	transcript	ENST00000525929.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA7_chr5_140829269_141017347	140941194	TCTTTCTT others(13): Show TCTTTCTTCCTTTCTTTCTTC	T T	intron_variant intron_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0002 a0002	a0002c0018 a0002c0018	a0002c0018t0007 a0002c0018t0007	a0002c0018t0007g0091 a0002c0018t0007g0091	1	248	0.0040	-20	c.235 others(41): Show c.2356-37747_2356-37728delCCTTTCTTTCTTCCTTTCTT	PCDHA7	ENSG00000204963.6	transcript	ENST00000525929.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA7_chr5_140829269_141017347	140941202	CCTTTCTT others(13): Show CCTTTCTTTCTTCCTTTCTTT	C C	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02559.hp2 HG02615.hp2 others(1): Show HG02280.hp2 HG02559.hp2 HG02615.hp2 HG03516.hp1	a0001 a0008 a0001 a0008	a0001c0004 a0001c0012 a0008c0013 a0001c0004 a0001c0012 a0008c0013	a0001c0004t0002 a0001c0004t0005 a0001c0012t0005 others(1): Show a0001c0004t0002 a0001c0004t0005 a0001c0012t0005 a0008c0013t0007	a0001c0004t0002g0130 a0001c0004t0005g0131 a0001c0012t0005g0126 others(1): Show a0001c0004t0002g0130 a0001c0004t0005g0131 a0001c0012t0005g0126 a0008c0013t0007g0123	4	248	0.0161	-20	c.235 others(41): Show c.2356-37735_2356-37716delCCTTTCTTTCTTTCTTTCTT	PCDHA7	ENSG00000204963.6	transcript	ENST00000525929.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA7_chr5_140829269_141017347	140948856	ATATTACT others(13): Show ATATTACTTCGGGTTTACTTT	A A	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0002 a0002	a0002c0020 a0002c0020	a0002c0020t0001 a0002c0020t0001	a0002c0020t0001g0119 a0002c0020t0001g0119	1	248	0.0040	-20	c.235 others(41): Show c.2356-30092_2356-30073delTATTACTTCGGGTTTACTTT	PCDHA7	ENSG00000204963.6	transcript	ENST00000525929.2	protein_coding	1/3			chr5	TogoVar
PCDHA7_chr5_140829269_141017347	140993462	TCACACAC others(13): Show TCACACACACACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG02602.hp2 HG02602.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0209 a0001c0002t0001g0209	1	248	0.0040	-20	c.250 others(41): Show c.2503+10927_2503+10946delACACACACACACACACACAC	PCDHA7	ENSG00000204963.6	transcript	ENST00000525929.2	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA8_chr5_140836187_141017347	140838075	ATAGTGTG others(13): Show ATAGTGTGTGTGTGTGTGTGT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG00280.hp1 HG00280.hp1	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0129 a0003c0003t0001g0129	1	258	0.0039	-20	c.-32 others(31): Show c.-3246_-3227delTAGTGTGTGTGTGTGTGTGT	PCDHA8	ENSG00000204962.6	transcript	ENST00000531613.2	protein_coding		3111		chr5	TogoVar
PCDHA8_chr5_140836187_141017347	140924896	AAAAAAAA others(13): Show AAAAAAAAAATAAAATAAAAT	A A	intron_variant intron_variant	MODIFIER	HG02896.hp2 HG02897.hp2 HG02970.hp1 others(2): Show HG02896.hp2 HG02897.hp2 HG02970.hp1 HG03195.hp1 NA19043.hp1	a0002 a0012 a0021 a0002 a0012 a0021	a0002c0002 a0012c0010 a0021c0017 a0002c0002 a0012c0010 a0021c0017	a0002c0002t0010 a0012c0010t0001 a0021c0017t0001 a0002c0002t0010 a0012c0010t0001 a0021c0017t0001	a0002c0002t0010g0165 a0012c0010t0001g0002 a0012c0010t0001g0003 others(2): Show a0002c0002t0010g0165 a0012c0010t0001g0002 a0012c0010t0001g0003 a0012c0010t0001g0004 a0021c0017t0001g0015	5	258	0.0194	-20	c.239 others(41): Show c.2395-54048_2395-54029delAAAAATAAAATAAAATAAAA	PCDHA8	ENSG00000204962.6	transcript	ENST00000531613.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA8_chr5_140836187_141017347	140941194	TCTTTCTT others(13): Show TCTTTCTTCCTTTCTTTCTTC	T T	intron_variant intron_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0006 a0002c0002t0006	a0002c0002t0006g0161 a0002c0002t0006g0161	1	258	0.0039	-20	c.239 others(41): Show c.2395-37747_2395-37728delCCTTTCTTTCTTCCTTTCTT	PCDHA8	ENSG00000204962.6	transcript	ENST00000531613.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA8_chr5_140836187_141017347	140941202	CCTTTCTT others(13): Show CCTTTCTTTCTTCCTTTCTTT	C C	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02559.hp1 HG02615.hp2 others(1): Show HG02280.hp1 HG02559.hp1 HG02615.hp2 HG03516.hp2	a0003 a0008 a0017 a0003 a0008 a0017	a0003c0003 a0008c0011 a0017c0014 a0003c0003 a0008c0011 a0017c0014	a0003c0003t0006 a0008c0011t0012 a0008c0011t0013 others(1): Show a0003c0003t0006 a0008c0011t0012 a0008c0011t0013 a0017c0014t0007	a0003c0003t0006g0028 a0008c0011t0012g0137 a0008c0011t0013g0233 others(1): Show a0003c0003t0006g0028 a0008c0011t0012g0137 a0008c0011t0013g0233 a0017c0014t0007g0234	4	258	0.0155	-20	c.239 others(41): Show c.2395-37735_2395-37716delCCTTTCTTTCTTTCTTTCTT	PCDHA8	ENSG00000204962.6	transcript	ENST00000531613.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA8_chr5_140836187_141017347	140948856	ATATTACT others(13): Show ATATTACTTCGGGTTTACTTT	A A	intron_variant intron_variant	MODIFIER	NA19030.hp2 NA19030.hp2	a0003 a0003	a0003c0003 a0003c0003	a0003c0003t0001 a0003c0003t0001	a0003c0003t0001g0026 a0003c0003t0001g0026	1	258	0.0039	-20	c.239 others(41): Show c.2395-30092_2395-30073delTATTACTTCGGGTTTACTTT	PCDHA8	ENSG00000204962.6	transcript	ENST00000531613.2	protein_coding	1/3			chr5	TogoVar
PCDHA8_chr5_140836187_141017347	140993462	TCACACAC others(13): Show TCACACACACACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG02602.hp2 HG02602.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0112 a0001c0001t0001g0112	1	258	0.0039	-20	c.254 others(41): Show c.2542+10927_2542+10946delACACACACACACACACACAC	PCDHA8	ENSG00000204962.6	transcript	ENST00000531613.2	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA9_chr5_140843382_141017347	140924896	AAAAAAAA others(13): Show AAAAAAAAAATAAAATAAAAT	A A	intron_variant intron_variant	MODIFIER	HG02970.hp2 HG03195.hp1 NA19043.hp2 HG02970.hp2 HG03195.hp1 NA19043.hp2	a0001 a0001	a0001c0001 a0001c0005 a0001c0001 a0001c0005	a0001c0001t0001 a0001c0005t0013 a0001c0001t0001 a0001c0005t0013	a0001c0001t0001g0143 a0001c0001t0001g0152 a0001c0005t0013g0042 a0001c0001t0001g0143 a0001c0001t0001g0152 a0001c0005t0013g0042	3	256	0.0117	-20	c.239 others(41): Show c.2395-54048_2395-54029delAAAAATAAAATAAAATAAAA	PCDHA9	ENSG00000204961.7	transcript	ENST00000532602.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA9_chr5_140843382_141017347	140941194	TCTTTCTT others(13): Show TCTTTCTTCCTTTCTTTCTTC	T T	intron_variant intron_variant	MODIFIER	HG03130.hp2 HG03130.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0007 a0001c0001t0007	a0001c0001t0007g0204 a0001c0001t0007g0204	1	256	0.0039	-20	c.239 others(41): Show c.2395-37747_2395-37728delCCTTTCTTTCTTCCTTTCTT	PCDHA9	ENSG00000204961.7	transcript	ENST00000532602.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA9_chr5_140843382_141017347	140941202	CCTTTCTT others(13): Show CCTTTCTTTCTTCCTTTCTTT	C C	intron_variant intron_variant	MODIFIER	HG02280.hp1 HG02559.hp2 HG02615.hp2 others(1): Show HG02280.hp1 HG02559.hp2 HG02615.hp2 HG03516.hp1	a0005 a0007 a0005 a0007	a0005c0006 a0007c0009 a0005c0006 a0007c0009	a0005c0006t0002 a0007c0009t0011 a0007c0009t0017 a0005c0006t0002 a0007c0009t0011 a0007c0009t0017	a0005c0006t0002g0253 a0007c0009t0011g0232 a0007c0009t0011g0239 others(1): Show a0005c0006t0002g0253 a0007c0009t0011g0232 a0007c0009t0011g0239 a0007c0009t0017g0002	4	256	0.0156	-20	c.239 others(41): Show c.2395-37735_2395-37716delCCTTTCTTTCTTTCTTTCTT	PCDHA9	ENSG00000204961.7	transcript	ENST00000532602.2	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHA9_chr5_140843382_141017347	140948856	ATATTACT others(13): Show ATATTACTTCGGGTTTACTTT	A A	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0012 a0012	a0012c0012 a0012c0012	a0012c0012t0010 a0012c0012t0010	a0012c0012t0010g0238 a0012c0012t0010g0238	1	256	0.0039	-20	c.239 others(41): Show c.2395-30092_2395-30073delTATTACTTCGGGTTTACTTT	PCDHA9	ENSG00000204961.7	transcript	ENST00000532602.2	protein_coding	1/3			chr5	TogoVar
PCDHA9_chr5_140843382_141017347	140993462	TCACACAC others(13): Show TCACACACACACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG02602.hp2 HG02602.hp2	a0004 a0004	a0004c0003 a0004c0003	a0004c0003t0001 a0004c0003t0001	a0004c0003t0001g0009 a0004c0003t0001g0009	1	256	0.0039	-20	c.254 others(41): Show c.2542+10927_2542+10946delACACACACACACACACACAC	PCDHA9	ENSG00000204961.7	transcript	ENST00000532602.2	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHAC1_chr5_140921299_141017347	140924896	AAAAAAAA others(13): Show AAAAAAAAAATAAAATAAAAT	A A	upstream_gene_variant upstream_gene_variant	MODIFIER	HG02896.hp1 HG02897.hp2 HG02970.hp2 others(2): Show HG02896.hp1 HG02897.hp2 HG02970.hp2 HG03195.hp1 NA19043.hp1	a0003 a0003	a0003c0005 a0003c0005	a0003c0005t0001 a0003c0005t0011 a0003c0005t0001 a0003c0005t0011	a0003c0005t0001g0198 a0003c0005t0001g0199 a0003c0005t0001g0200 others(2): Show a0003c0005t0001g0198 a0003c0005t0001g0199 a0003c0005t0001g0200 a0003c0005t0001g0201 a0003c0005t0011g0202	5	280	0.0179	-20	c.-19 others(31): Show c.-1996_-1977delAAAAAAAAATAAAATAAAAT	PCDHAC1	ENSG00000248383.5	transcript	ENST00000253807.3	protein_coding		1402		chr5	TogoVar
PCDHAC1_chr5_140921299_141017347	140941194	TCTTTCTT others(13): Show TCTTTCTTCCTTTCTTTCTTC	T T	intron_variant intron_variant	MODIFIER	HG03130.hp1 HG03130.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0009 a0001c0002t0009	a0001c0002t0009g0187 a0001c0002t0009g0187	1	280	0.0036	-20	c.243 others(41): Show c.2433+11877_2433+11896delCCTTTCTTTCTTCCTTTCTT	PCDHAC1	ENSG00000248383.5	transcript	ENST00000253807.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHAC1_chr5_140921299_141017347	140941202	CCTTTCTT others(13): Show CCTTTCTTTCTTCCTTTCTTT	C C	intron_variant intron_variant	MODIFIER	HG02280.hp2 HG02559.hp1 HG02615.hp1 others(1): Show HG02280.hp2 HG02559.hp1 HG02615.hp1 HG03516.hp1	a0004 a0008 a0009 a0004 a0008 a0009	a0004c0008 a0008c0024 a0009c0013 a0004c0008 a0008c0024 a0009c0013	a0004c0008t0004 a0004c0008t0007 a0008c0024t0009 others(1): Show a0004c0008t0004 a0004c0008t0007 a0008c0024t0009 a0009c0013t0007	a0004c0008t0004g0236 a0004c0008t0007g0233 a0008c0024t0009g0235 others(1): Show a0004c0008t0004g0236 a0004c0008t0007g0233 a0008c0024t0009g0235 a0009c0013t0007g0234	4	280	0.0143	-20	c.243 others(41): Show c.2433+11889_2433+11908delCCTTTCTTTCTTTCTTTCTT	PCDHAC1	ENSG00000248383.5	transcript	ENST00000253807.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHAC1_chr5_140921299_141017347	140948856	ATATTACT others(13): Show ATATTACTTCGGGTTTACTTT	A A	intron_variant intron_variant	MODIFIER	NA19030.hp1 NA19030.hp1	a0001 a0001	a0001c0023 a0001c0023	a0001c0023t0001 a0001c0023t0001	a0001c0023t0001g0226 a0001c0023t0001g0226	1	280	0.0036	-20	c.243 others(41): Show c.2433+19532_2433+19551delTATTACTTCGGGTTTACTTT	PCDHAC1	ENSG00000248383.5	transcript	ENST00000253807.3	protein_coding	1/3			chr5	TogoVar
PCDHAC1_chr5_140921299_141017347	140993462	TCACACAC others(13): Show TCACACACACACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG02602.hp1 HG02602.hp1	a0002 a0002	a0002c0001 a0002c0001	a0002c0001t0001 a0002c0001t0001	a0002c0001t0001g0007 a0002c0001t0001g0007	1	280	0.0036	-20	c.258 others(41): Show c.2581+10927_2581+10946delACACACACACACACACACAC	PCDHAC1	ENSG00000248383.5	transcript	ENST00000253807.3	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHAC2_chr5_140961476_141017347	140993460	TCTCACAC others(13): Show TCTCACACACACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG06807.hp2 HG06807.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0001 a0001c0002t0001	a0001c0002t0001g0204 a0001c0002t0001g0204	1	324	0.0031	-20	c.271 others(41): Show c.2713+10899_2713+10918delTCACACACACACACACACAC	PCDHAC2	ENSG00000243232.6	transcript	ENST00000289269.7	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHAC2_chr5_140961476_141017347	140993462	TCACACAC others(13): Show TCACACACACACACACACACA	T T	intron_variant intron_variant	MODIFIER	HG02602.hp2 HG02602.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0076 a0001c0001t0001g0076	1	324	0.0031	-20	c.271 others(41): Show c.2713+10927_2713+10946delACACACACACACACACACAC	PCDHAC2	ENSG00000243232.6	transcript	ENST00000289269.7	protein_coding	3/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA10_chr5_141407987_141517975	141438621	TATATATA others(13): Show TATATATATATATATACACAC	T T	intron_variant intron_variant	MODIFIER	NA18984.hp2 NA18984.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0002 a0001c0001t0002	a0001c0001t0002g0166 a0001c0001t0002g0166	1	306	0.0033	-20	c.243 others(41): Show c.2436+23012_2436+23031delTATATATATATATACACACA	PCDHGA10	ENSG00000253846.3	transcript	ENST00000398610.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA10_chr5_141407987_141517975	141473840	TTAGGAAG others(13): Show TTAGGAAGATGAACCTCGCTA	T T	intron_variant intron_variant	MODIFIER	NA19066.hp2 NA19066.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0237 a0002c0002t0001g0237	1	306	0.0033	-20	c.243 others(41): Show c.2437-20965_2437-20946delAGGAAGATGAACCTCGCTAT	PCDHGA10	ENSG00000253846.3	transcript	ENST00000398610.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA10_chr5_141407987_141517975	141498971	GGGAAGGA others(13): Show GGGAAGGAAGGAAGGAAGGAA	G G	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02809.hp2 HG02897.hp1 others(2): Show HG02723.hp2 HG02809.hp2 HG02897.hp1 HG03490.hp1 HG03492.hp1	a0001 a0001	a0001c0001 a0001c0005 a0001c0021 a0001c0001 a0001c0005 a0001c0021	a0001c0001t0001 a0001c0001t0005 a0001c0005t0001 others(1): Show a0001c0001t0001 a0001c0001t0005 a0001c0005t0001 a0001c0021t0001	a0001c0001t0001g0008 a0001c0001t0005g0002 a0001c0001t0005g0003 others(2): Show a0001c0001t0001g0008 a0001c0001t0005g0002 a0001c0001t0005g0003 a0001c0005t0001g0183 a0001c0021t0001g0173	5	306	0.0163	-20	c.249 others(39): Show c.2495+4144_2495+4163delGAAGGAAGGAAGGAAGGAAG	PCDHGA10	ENSG00000253846.3	transcript	ENST00000398610.3	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA11_chr5_141416051_141517975	141438621	TATATATA others(13): Show TATATATATATATATACACAC	T T	intron_variant intron_variant	MODIFIER	NA18984.hp2 NA18984.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0003 a0001c0001t0003	a0001c0001t0003g0289 a0001c0001t0003g0289	1	310	0.0032	-20	c.243 others(41): Show c.2433+14963_2433+14982delTATATATATATATACACACA	PCDHGA11	ENSG00000253873.6	transcript	ENST00000398587.7	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA11_chr5_141416051_141517975	141473840	TTAGGAAG others(13): Show TTAGGAAGATGAACCTCGCTA	T T	intron_variant intron_variant	MODIFIER	NA19066.hp1 NA19066.hp1	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0245 a0001c0001t0001g0245	1	310	0.0032	-20	c.243 others(41): Show c.2434-20965_2434-20946delAGGAAGATGAACCTCGCTAT	PCDHGA11	ENSG00000253873.6	transcript	ENST00000398587.7	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA11_chr5_141416051_141517975	141498971	GGGAAGGA others(13): Show GGGAAGGAAGGAAGGAAGGAA	G G	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02809.hp2 HG02897.hp1 others(2): Show HG02723.hp1 HG02809.hp2 HG02897.hp1 HG03490.hp1 HG03492.hp2	a0001 a0001	a0001c0001 a0001c0018 a0001c0001 a0001c0018	a0001c0001t0006 a0001c0001t0009 a0001c0018t0001 a0001c0001t0006 a0001c0001t0009 a0001c0018t0001	a0001c0001t0006g0087 a0001c0001t0006g0088 a0001c0001t0009g0080 others(2): Show a0001c0001t0006g0087 a0001c0001t0006g0088 a0001c0001t0009g0080 a0001c0001t0009g0093 a0001c0018t0001g0112	5	310	0.0161	-20	c.249 others(39): Show c.2492+4144_2492+4163delGAAGGAAGGAAGGAAGGAAG	PCDHGA11	ENSG00000253873.6	transcript	ENST00000398587.7	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA12_chr5_141425507_141517975	141438621	TATATATA others(13): Show TATATATATATATATACACAC	T T	intron_variant intron_variant	MODIFIER	NA18984.hp2 NA18984.hp2	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0002 a0001c0002t0002	a0001c0002t0002g0287 a0001c0002t0002g0287	1	318	0.0031	-20	c.242 others(39): Show c.2424+5440_2424+5459delTATATATATATATACACACA	PCDHGA12	ENSG00000253159.3	transcript	ENST00000252085.4	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA12_chr5_141425507_141517975	141473840	TTAGGAAG others(13): Show TTAGGAAGATGAACCTCGCTA	T T	intron_variant intron_variant	MODIFIER	NA19066.hp2 NA19066.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0124 a0001c0001t0001g0124	1	318	0.0031	-20	c.242 others(41): Show c.2425-20965_2425-20946delAGGAAGATGAACCTCGCTAT	PCDHGA12	ENSG00000253159.3	transcript	ENST00000252085.4	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA12_chr5_141425507_141517975	141498300	GGTCACAC others(13): Show GGTCACACTGCCTACACAGAA	G G	intron_variant intron_variant	MODIFIER	NA18988.hp1 NA18988.hp1	a0001 a0001	a0001c0002 a0001c0002	a0001c0002t0004 a0001c0002t0004	a0001c0002t0004g0019 a0001c0002t0004g0019	1	318	0.0031	-20	c.248 others(39): Show c.2483+3437_2483+3456delTCACACTGCCTACACAGAAG	PCDHGA12	ENSG00000253159.3	transcript	ENST00000252085.4	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA12_chr5_141425507_141517975	141498971	GGGAAGGA others(13): Show GGGAAGGAAGGAAGGAAGGAA	G G	intron_variant intron_variant	MODIFIER	HG02723.hp2 HG02809.hp1 HG02897.hp2 others(3): Show HG02723.hp2 HG02809.hp1 HG02897.hp2 HG03041.hp1 HG03490.hp2 HG03492.hp1	a0001 a0001	a0001c0001 a0001c0019 a0001c0021 a0001c0001 a0001c0019 a0001c0021	a0001c0001t0001 a0001c0001t0005 a0001c0019t0001 others(1): Show a0001c0001t0001 a0001c0001t0005 a0001c0019t0001 a0001c0021t0001	a0001c0001t0001g0032 a0001c0001t0001g0161 a0001c0001t0005g0059 others(3): Show a0001c0001t0001g0032 a0001c0001t0001g0161 a0001c0001t0005g0059 a0001c0001t0005g0060 a0001c0019t0001g0002 a0001c0021t0001g0312	6	318	0.0189	-20	c.248 others(39): Show c.2483+4144_2483+4163delGAAGGAAGGAAGGAAGGAAG	PCDHGA12	ENSG00000253159.3	transcript	ENST00000252085.4	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA1_chr5_141325514_141517975	141347137	CTCTTTCT others(13): Show CTCTTTCTTTCTTTCTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG00733.hp1 HG00738.hp2 HG01099.hp1 others(19): Show HG00733.hp1 HG00738.hp2 HG01099.hp1 HG01168.hp2 HG01175.hp1 HG01192.hp2 HG01516.hp1 HG01517.hp1 HG02258.hp1 HG02559.hp1 HG02622.hp1 HG02698.hp2 HG02886.hp2 HG03098.hp2 HG03130.hp2 HG03209.hp2 HG03225.hp1 HG03453.hp1 HG03834.hp1 NA19043.hp2 NA20129.hp1 homoSapiens_chm13v2.hp1	a0001 a0003 a0013 a0001 a0003 a0013	a0001c0001 a0001c0002 a0003c0004 others(2): Show a0001c0001 a0001c0002 a0003c0004 a0003c0019 a0013c0013	a0001c0001t0001 a0001c0002t0001 a0003c0004t0001 others(2): Show a0001c0001t0001 a0001c0002t0001 a0003c0004t0001 a0003c0019t0001 a0013c0013t0001	a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0076 others(19): Show a0001c0001t0001g0002 a0001c0001t0001g0003 a0001c0001t0001g0076 a0001c0002t0001g0034 a0003c0004t0001g0234 a0003c0004t0001g0235 a0003c0004t0001g0236 a0003c0004t0001g0237 a0003c0004t0001g0239 a0003c0004t0001g0240 a0003c0004t0001g0241 a0003c0004t0001g0242 a0003c0004t0001g0243 a0003c0004t0001g0244 a0003c0004t0001g0245 a0003c0004t0001g0247 a0003c0004t0001g0248 a0003c0004t0001g0255 a0003c0004t0001g0256 a0003c0004t0001g0258 a0003c0019t0001g0246 a0013c0013t0001g0257	22	268	0.0821	-20	c.242 others(41): Show c.2421+14057_2421+14076delTCTTTCTTTCTTTCTTTCTT	PCDHGA1	ENSG00000204956.6	transcript	ENST00000517417.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA1_chr5_141325514_141517975	141473840	TTAGGAAG others(13): Show TTAGGAAGATGAACCTCGCTA	T T	intron_variant intron_variant	MODIFIER	NA19066.hp2 NA19066.hp2	a0001 a0001	a0001c0001 a0001c0001	a0001c0001t0001 a0001c0001t0001	a0001c0001t0001g0156 a0001c0001t0001g0156	1	268	0.0037	-20	c.242 others(41): Show c.2422-20965_2422-20946delAGGAAGATGAACCTCGCTAT	PCDHGA1	ENSG00000204956.6	transcript	ENST00000517417.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA1_chr5_141325514_141517975	141498971	GGGAAGGA others(13): Show GGGAAGGAAGGAAGGAAGGAA	G G	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02809.hp1 HG02897.hp2 others(2): Show HG02723.hp1 HG02809.hp1 HG02897.hp2 HG03490.hp2 HG03492.hp2	a0001 a0004 a0001 a0004	a0001c0001 a0001c0015 a0004c0005 a0001c0001 a0001c0015 a0004c0005	a0001c0001t0001 a0001c0015t0001 a0004c0005t0004 a0001c0001t0001 a0001c0015t0001 a0004c0005t0004	a0001c0001t0001g0179 a0001c0001t0001g0209 a0001c0015t0001g0085 others(2): Show a0001c0001t0001g0179 a0001c0001t0001g0209 a0001c0015t0001g0085 a0004c0005t0004g0031 a0004c0005t0004g0032	5	268	0.0187	-20	c.248 others(39): Show c.2480+4144_2480+4163delGAAGGAAGGAAGGAAGGAAG	PCDHGA1	ENSG00000204956.6	transcript	ENST00000517417.3	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA2_chr5_141333760_141517975	141347137	CTCTTTCT others(13): Show CTCTTTCTTTCTTTCTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG00738.hp2 HG01099.hp2 others(19): Show HG00733.hp2 HG00738.hp2 HG01099.hp2 HG01168.hp2 HG01175.hp2 HG01192.hp1 HG01516.hp2 HG01517.hp2 HG02258.hp2 HG02559.hp2 HG02622.hp1 HG02698.hp2 HG02886.hp1 HG03098.hp1 HG03130.hp2 HG03209.hp2 HG03225.hp2 HG03453.hp2 HG03834.hp2 NA19043.hp2 NA20129.hp2 homoSapiens_chm13v2.hp1	a0001 a0001	a0001c0001 a0001c0006 a0001c0019 a0001c0001 a0001c0006 a0001c0019	a0001c0001t0001 a0001c0006t0001 a0001c0019t0001 a0001c0001t0001 a0001c0006t0001 a0001c0019t0001	a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0106 others(19): Show a0001c0001t0001g0054 a0001c0001t0001g0055 a0001c0001t0001g0106 a0001c0001t0001g0110 a0001c0001t0001g0112 a0001c0001t0001g0113 a0001c0001t0001g0114 a0001c0001t0001g0115 a0001c0001t0001g0116 a0001c0001t0001g0117 a0001c0001t0001g0118 a0001c0001t0001g0119 a0001c0001t0001g0120 a0001c0001t0001g0121 a0001c0001t0001g0122 a0001c0001t0001g0123 a0001c0001t0001g0124 a0001c0001t0001g0125 a0001c0001t0001g0127 a0001c0001t0001g0128 a0001c0006t0001g0189 a0001c0019t0001g0126	22	272	0.0809	-20	c.242 others(39): Show c.2424+5767_2424+5786delTCTTTCTTTCTTTCTTTCTT	PCDHGA2	ENSG00000081853.15	transcript	ENST00000394576.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA2_chr5_141333760_141517975	141438621	TATATATA others(13): Show TATATATATATATATACACAC	T T	intron_variant intron_variant	MODIFIER	NA18984.hp2 NA18984.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0002 a0002c0002t0002	a0002c0002t0002g0255 a0002c0002t0002g0255	1	272	0.0037	-20	c.242 others(41): Show c.2425-56184_2425-56165delTATATATATATATACACACA	PCDHGA2	ENSG00000081853.15	transcript	ENST00000394576.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA2_chr5_141333760_141517975	141473840	TTAGGAAG others(13): Show TTAGGAAGATGAACCTCGCTA	T T	intron_variant intron_variant	MODIFIER	NA19066.hp2 NA19066.hp2	a0002 a0002	a0002c0002 a0002c0002	a0002c0002t0001 a0002c0002t0001	a0002c0002t0001g0243 a0002c0002t0001g0243	1	272	0.0037	-20	c.242 others(41): Show c.2425-20965_2425-20946delAGGAAGATGAACCTCGCTAT	PCDHGA2	ENSG00000081853.15	transcript	ENST00000394576.3	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA2_chr5_141333760_141517975	141498971	GGGAAGGA others(13): Show GGGAAGGAAGGAAGGAAGGAA	G G	intron_variant intron_variant	MODIFIER	HG02723.hp1 HG02809.hp1 HG02897.hp1 others(2): Show HG02723.hp1 HG02809.hp1 HG02897.hp1 HG03490.hp1 HG03492.hp2	a0001 a0001	a0001c0001 a0001c0018 a0001c0001 a0001c0018	a0001c0001t0001 a0001c0001t0005 a0001c0018t0001 a0001c0001t0001 a0001c0001t0005 a0001c0018t0001	a0001c0001t0001g0001 a0001c0001t0001g0018 a0001c0001t0005g0185 others(2): Show a0001c0001t0001g0001 a0001c0001t0001g0018 a0001c0001t0005g0185 a0001c0001t0005g0186 a0001c0018t0001g0040	5	272	0.0184	-20	c.248 others(39): Show c.2483+4144_2483+4163delGAAGGAAGGAAGGAAGGAAG	PCDHGA2	ENSG00000081853.15	transcript	ENST00000394576.3	protein_coding	2/3		INFO_REALIGN_3_PRIME	chr5	TogoVar
PCDHGA3_chr5_141338829_141517975	141347137	CTCTTTCT others(13): Show CTCTTTCTTTCTTTCTTTCTT	C C	intron_variant intron_variant	MODIFIER	HG00733.hp2 HG00738.hp2 HG01099.hp2 others(19): Show HG00733.hp2 HG00738.hp2 HG01099.hp2 HG01168.hp2 HG01175.hp2 HG01192.hp1 HG01516.hp1 HG01517.hp2 HG02258.hp2 HG02559.hp2 HG02622.hp1 HG02698.hp1 HG02886.hp1 HG03098.hp1 HG03130.hp2 HG03209.hp1 HG03225.hp1 HG03453.hp1 HG03834.hp2 NA19043.hp1 NA20129.hp2 homoSapiens_chm13v2.hp1	a0003 a0008 a0003 a0008	a0003c0003 a0003c0017 a0008c0012 a0003c0003 a0003c0017 a0008c0012	a0003c0003t0001 a0003c0017t0001 a0008c0012t0001 a0003c0003t0001 a0003c0017t0001 a0008c0012t0001	a0003c0003t0001g0028 a0003c0003t0001g0029 a0003c0003t0001g0030 others(19): Show a0003c0003t0001g0028 a0003c0003t0001g0029 a0003c0003t0001g0030 a0003c0003t0001g0031 a0003c0003t0001g0032 a0003c0003t0001g0033 a0003c0003t0001g0034 a0003c0003t0001g0035 a0003c0003t0001g0036 a0003c0003t0001g0037 a0003c0003t0001g0038 a0003c0003t0001g0039 a0003c0003t0001g0040 a0003c0003t0001g0041 a0003c0003t0001g0042 a0003c0003t0001g0043 a0003c0003t0001g0044 a0003c0003t0001g0046 a0003c0003t0001g0047 a0003c0017t0001g0045 a0008c0012t0001g0048 a0008c0012t0001g0049	22	270	0.0815	-20	c.242 others(37): Show c.2424+705_2424+724delTCTTTCTTTCTTTCTTTCTT	PCDHGA3	ENSG00000254245.3	transcript	ENST00000253812.8	protein_coding	1/3		INFO_REALIGN_3_PRIME	chr5	TogoVar

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